mRNA_H-paniculata_contig214.5628.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig214.5628.1 vs. uniprot
Match: D7FQC4_ECTSI (G-patch domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQC4_ECTSI) HSP 1 Score: 151 bits (382), Expect = 4.690e-42 Identity = 82/103 (79.61%), Postives = 87/103 (84.47%), Query Frame = 1
Query: 16 VGDTLNQAWKNDKSKFGLKMLQKMGWTEGKGLGKNEDGVCEHVKVSKKSNNLGLGATRDQTGAAGWASTAVSFNGSFSTADLRAILGQSA---GPSLPSYPAI 315
VGDT NQAWKNDKSKFGLKM+QKMGWTEGKGLGKNEDGV EHVKVSKKSNNLGLGAT D +GAAGWAS A G FS A+LRAILGQ+A PSLPSYP +
Sbjct: 8 VGDTQNQAWKNDKSKFGLKMMQKMGWTEGKGLGKNEDGVSEHVKVSKKSNNLGLGATHDSSGAAGWAS-AADVKG-FSAAELRAILGQAATTADPSLPSYPVV 108
BLAST of mRNA_H-paniculata_contig214.5628.1 vs. uniprot
Match: A0A6H5JF24_9PHAE (G-patch domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF24_9PHAE) HSP 1 Score: 144 bits (363), Expect = 3.030e-38 Identity = 71/83 (85.54%), Postives = 74/83 (89.16%), Query Frame = 1
Query: 4 AASCVGDTLNQAWKNDKSKFGLKMLQKMGWTEGKGLGKNEDGVCEHVKVSKKSNNLGLGATRDQTGAAGWASTAVSFNGSFST 252
AA VGDT NQAWKNDKSKFGLKM+QKMGWTEGKGLGKNEDGV EHVKV+KKSNNLGLGATRD +GAAGWAS AVSFNG T
Sbjct: 4 AAPRVGDTQNQAWKNDKSKFGLKMMQKMGWTEGKGLGKNEDGVSEHVKVAKKSNNLGLGATRDSSGAAGWASAAVSFNGVLET 86
BLAST of mRNA_H-paniculata_contig214.5628.1 vs. uniprot
Match: A0A6V1RLJ9_HETAK (Hypothetical protein n=5 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RLJ9_HETAK) HSP 1 Score: 95.5 bits (236), Expect = 2.480e-20 Identity = 45/78 (57.69%), Postives = 57/78 (73.08%), Query Frame = 1
Query: 1 MAASCVGDTLNQAWKNDKSKFGLKMLQKMGWTEGKGLGKNEDGVCEHVKVSKKSNNLGLGATRDQTGAAGWASTAVSF 234
+A S + D LN WKNDK+ FG +ML KMGW+EGKGLGKNEDG H+ VSKK++ LGLG +D G +GW+S+ SF
Sbjct: 8 VARSNLKDNLNSHWKNDKTGFGFRMLSKMGWSEGKGLGKNEDGQSSHIIVSKKTDALGLGCDKDTIGNSGWSSSIQSF 85
BLAST of mRNA_H-paniculata_contig214.5628.1 vs. uniprot
Match: A0A835ZDF6_9STRA (G-patch domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDF6_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 1.750e-18 Identity = 39/77 (50.65%), Postives = 58/77 (75.32%), Query Frame = 1
Query: 25 TLNQAWKNDKSK-FGLKMLQKMGWTEGKGLGKNEDGVCEHVKVSKKSNNLGLGATRDQTGAAGWASTAVSFNGSFST 252
TLNQAW N ++ K+++KMGW+EGKGLGK+EDG+ H++V ++ NLGLGA +D+ G+AGW++T SF+ +T
Sbjct: 25 TLNQAWANSRTDGIAYKLMRKMGWSEGKGLGKDEDGIASHIRVQRRDGNLGLGAAKDRDGSAGWSATTTSFSAVLAT 101
BLAST of mRNA_H-paniculata_contig214.5628.1 vs. uniprot
Match: A0A2R5GL57_9STRA (Protein PXR1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GL57_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 6.120e-17 Identity = 45/90 (50.00%), Postives = 55/90 (61.11%), Query Frame = 1
Query: 22 DTLNQAWKNDKSKFGLKMLQKMGWTEGKGLGKNEDGVCEHVKVSKKSNNLGLGATRDQTGAAGWASTAVSFNGSFSTADLRAILGQSAGP 291
DTLNQ W NDK+KFG KM+ KMGW++GKG GKNEDG HVKV K++ LGLG D G + +FN D+ L Q+ GP
Sbjct: 8 DTLNQRWANDKNKFGYKMMLKMGWSDGKGTGKNEDGRASHVKVEKRTETLGLGTEEDGVGNVAFQGQINNFN------DVLRSLNQAHGP 91
BLAST of mRNA_H-paniculata_contig214.5628.1 vs. uniprot
Match: A0A0L0H5A9_SPIPD (G-patch domain-containing protein n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0H5A9_SPIPD) HSP 1 Score: 88.6 bits (218), Expect = 6.270e-17 Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 1
Query: 22 DTLNQAWKNDKSKFGLKMLQKMGWTEGKGLGKNEDGVCEHVKVSKKSNNLGLGATR 189
D N+ WKND+SKFG KMLQKMGW+EGKGLG NEDG+ EHVKV K +NLG+GA R
Sbjct: 15 DPQNKTWKNDQSKFGFKMLQKMGWSEGKGLGANEDGLTEHVKVRLKEDNLGVGADR 70
BLAST of mRNA_H-paniculata_contig214.5628.1 vs. uniprot
Match: A0A507E6R4_9FUNG (G-patch domain-containing protein n=1 Tax=Spizellomyces sp. 'palustris' TaxID=117820 RepID=A0A507E6R4_9FUNG) HSP 1 Score: 87.8 bits (216), Expect = 1.160e-16 Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 1
Query: 22 DTLNQAWKNDKSKFGLKMLQKMGWTEGKGLGKNEDGVCEHVKVSKKSNNLGLGATR 189
D N+ WKND+SKFG KMLQKMGW+EGKGLG NEDG+ EHVKV K +NLG+GA R
Sbjct: 15 DPQNKTWKNDQSKFGFKMLQKMGWSEGKGLGANEDGLREHVKVRLKEDNLGVGADR 70
BLAST of mRNA_H-paniculata_contig214.5628.1 vs. uniprot
Match: A0A4P9WD92_9FUNG (G-patch domain-containing protein (Fragment) n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9WD92_9FUNG) HSP 1 Score: 79.7 bits (195), Expect = 3.080e-16 Identity = 35/53 (66.04%), Postives = 42/53 (79.25%), Query Frame = 1
Query: 22 DTLNQAWKNDKSKFGLKMLQKMGWTEGKGLGKNEDGVCEHVKVSKKSNNLGLG 180
D N+ WK+D+SKFGLKM+QKMGW+EGKGLG EDG EHVK+ K +NLG G
Sbjct: 15 DPQNKQWKDDQSKFGLKMMQKMGWSEGKGLGAREDGQTEHVKIKLKEDNLGTG 67
BLAST of mRNA_H-paniculata_contig214.5628.1 vs. uniprot
Match: A0A1Y2CSI8_9FUNG (G-patch-domain-containing protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2CSI8_9FUNG) HSP 1 Score: 81.3 bits (199), Expect = 7.410e-16 Identity = 41/72 (56.94%), Postives = 51/72 (70.83%), Query Frame = 1
Query: 22 DTLNQAWKNDKSKFGLKMLQKMGWTEGKGLGKNEDGVCEHVKVSKKSNNLGLGATRDQTGAAGWASTAVSFN 237
D N+ W +DKSK G KM+Q MGW+ GKGLGKNEDG+ EHVKVS KSNNLG+GA D+ + W +F+
Sbjct: 15 DPQNRQWADDKSKIGYKMMQAMGWS-GKGLGKNEDGMAEHVKVSLKSNNLGIGA--DKKSSDNWMDNTFAFS 83
BLAST of mRNA_H-paniculata_contig214.5628.1 vs. uniprot
Match: A0A2T9Y0N7_9FUNG (G-patch domain-containing protein n=1 Tax=Smittium simulii TaxID=133385 RepID=A0A2T9Y0N7_9FUNG) HSP 1 Score: 84.7 bits (208), Expect = 1.080e-15 Identity = 35/55 (63.64%), Postives = 45/55 (81.82%), Query Frame = 1
Query: 22 DTLNQAWKNDKSKFGLKMLQKMGWTEGKGLGKNEDGVCEHVKVSKKSNNLGLGAT 186
D NQ W NDK+KFG +++QKMGW+EGKGLG NE G+ EH+K+ K+NNLG+GAT
Sbjct: 15 DPRNQTWGNDKNKFGYRLMQKMGWSEGKGLGSNETGIAEHLKIRLKTNNLGIGAT 69 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig214.5628.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig214.5628.1 >prot_H-paniculata_contig214.5628.1 ID=prot_H-paniculata_contig214.5628.1|Name=mRNA_H-paniculata_contig214.5628.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=219bp MAASCVGDTLNQAWKNDKSKFGLKMLQKMGWTEGKGLGKNEDGVCEHVKVback to top mRNA from alignment at H-paniculata_contig214:39513..40463- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig214.5628.1 ID=mRNA_H-paniculata_contig214.5628.1|Name=mRNA_H-paniculata_contig214.5628.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=951bp|location=Sequence derived from alignment at H-paniculata_contig214:39513..40463- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig214:39513..40463- >mRNA_H-paniculata_contig214.5628.1 ID=mRNA_H-paniculata_contig214.5628.1|Name=mRNA_H-paniculata_contig214.5628.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1314bp|location=Sequence derived from alignment at H-paniculata_contig214:39513..40463- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |