mRNA_H-paniculata_contig21293.5587.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig21293.5587.1
Unique NamemRNA_H-paniculata_contig21293.5587.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig21293.5587.1 vs. uniprot
Match: A0A6H5JBB4_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBB4_9PHAE)

HSP 1 Score: 359 bits (921), Expect = 3.700e-115
Identity = 177/250 (70.80%), Postives = 205/250 (82.00%), Query Frame = 1
Query:    1 YDCDTYWPVHCLSDDREETLKEASGVARGATIAVLDLGGSEGLHQVLGGHMWEAAAGTGARLHSGSWGFPDDPCEVDDASVSFDAWAYENPEHLLIFAAGNLGDDVTGCSISSPAIGKNCLAVGSSMSGAIRLSPPSGDMDDVSDFSSVGPTTDGRIKPDVVAPGHYVFSAANGGQGSCELQLNSGTSMSCPLTAGAAALVRQYFVDGFHSADAEARG-LCSASEKTTAASDGVEFACEAFVPTGALIKV 747
            YDCD YW   CLSDDR ETL++A GVA GA +AVLDLG S+ L Q LGG MWE +AGTGAR+HS SWGF D+PC VDD+SVSFD WAYENPEHLL+FAAGNLGDD+TGCSI+SPA+ KNCLAVGSSMSG +RLSP  GDMD+VSDFSS+GPTTD RIKPD++APGHY+FSA+NGG GSC+L  NSGTSMSCP+ AGAAALVRQY VDGF++ D  ARG LC+A            +AC+AF P+GAL+KV
Sbjct:  618 YDCDVYWEAACLSDDRSETLEDAKGVAPGAKLAVLDLGSSDSLEQALGGTMWEVSAGTGARIHSASWGFIDEPCTVDDSSVSFDQWAYENPEHLLVFAAGNLGDDMTGCSIASPAVSKNCLAVGSSMSGELRLSP--GDMDEVSDFSSMGPTTDDRIKPDILAPGHYIFSASNGGDGSCQLDRNSGTSMSCPIAAGAAALVRQYLVDGFYAEDVGARGSLCAAGTDPA-------WACDAFSPSGALVKV 858          
BLAST of mRNA_H-paniculata_contig21293.5587.1 vs. uniprot
Match: D8LK25_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK25_ECTSI)

HSP 1 Score: 353 bits (907), Expect = 1.770e-110
Identity = 173/249 (69.48%), Postives = 205/249 (82.33%), Query Frame = 1
Query:    1 YDCDTYWPVHCLSDDREETLKEASGVARGATIAVLDLGGSEGLHQVLGGHMWEAAAGTGARLHSGSWGFPDDPCEVDDASVSFDAWAYENPEHLLIFAAGNLGDDVTGCSISSPAIGKNCLAVGSSMSGAIRLSPPSGDMDDVSDFSSVGPTTDGRIKPDVVAPGHYVFSAANGGQGSCELQLNSGTSMSCPLTAGAAALVRQYFVDGFHSADAEARG-LCSASEKTTAASDGVEFACEAFVPTGALIK 744
            YDCD YW   CLSDDR ETL++A GVA GA +AVLDLG S+ L Q LGG MWE +AGTGAR+HS SWGF D+PC VDD++VSFD WAYENPEHLL+FAAGNLGDD+ GCSI+SPA+ KNCLAVGSSMSG +RLSP  GD+D+VSDFSS+GPTTD RIKPD++APGHY+FSA+NGG+GSC+L  NSGTSMSCP+ AGAAALVRQY VDGF++ D  ARG LC+A+           +AC+AF P+GAL+K
Sbjct:  529 YDCDVYWETACLSDDRSETLEDAKGVAPGAKLAVLDLGSSDSLEQALGGTMWEVSAGTGARIHSASWGFIDEPCTVDDSAVSFDEWAYENPEHLLVFAAGNLGDDMEGCSIASPALSKNCLAVGSSMSGELRLSP--GDLDEVSDFSSLGPTTDDRIKPDILAPGHYIFSASNGGEGSCQLDRNSGTSMSCPIAAGAAALVRQYLVDGFYADDVAARGSLCAAATDPA-------WACDAFSPSGALVK 768          
BLAST of mRNA_H-paniculata_contig21293.5587.1 vs. uniprot
Match: D8LBZ2_ECTSI (Subtilisin (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBZ2_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 1.030e-53
Identity = 122/265 (46.04%), Postives = 158/265 (59.62%), Query Frame = 1
Query:    4 DCDTYWPVHCLSDDREETLKEASGVARGATIAVLD-LGGSEGLH-QVLGGHMWEAAAGTGARLHSGSWGFPDDPCEVDDASVSFDAWAYENPEHLLIFAAGNLGDDVTGCSISSPAIGKNCLAVGSSMSGAIRLS-------PPSGD-----MDDVSDFSSVGPTTDGRIKPDVVAPGHYVFSAANGGQGS--CELQLNSGTSMSCPLTAGAAALVRQYFV-DGFHSADAEARGLCSASEKTTAASDGVEFACEAFVPTGALIKV 747
            DCD     +CL DD  ETL++  GVARGA +A+ D L    G+  ++ G  MWE A   G++L S SWG     CE     V +D + Y N + LL+FAAGN G++ +GC++ SPA+ KN LAVG+S SG  RLS       P  GD     +D ++ FSS GPT DGRIKP+VVAPG  ++SAA GG G+  C L   +GTSMS P+ AGAAALVRQYF  + F++ D E RG C +            F CE F P+ A +KV
Sbjct:  369 DCDDRPEEYCLGDDEAETLQQHGGVARGAQLAIFDILDDYTGIGIEMAGNGMWEPAMEAGSKLSSNSWGIYA-YCEYLSYDVLYDDFMYRNQDQLLLFAAGNDGEEWSGCTMGSPAVAKNVLAVGASTSGPGRLSFTDEDGDPTDGDSRVQDIDAMAYFSSFGPTLDGRIKPEVVAPGDMIYSAAGGGDGNYTCRLWQYAGTSMSTPVVAGAAALVRQYFKNETFYTHDVEERGFCDS------------FGCEPFAPSAATVKV 620          
BLAST of mRNA_H-paniculata_contig21293.5587.1 vs. uniprot
Match: A0A6H5K229_9PHAE (Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K229_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 1.620e-52
Identity = 122/245 (49.80%), Postives = 160/245 (65.31%), Query Frame = 1
Query:   31 CLSDDREETLKEASGVARGATIAVLDLGGSE-GLHQVLGGHMWEAAAGTGARLHSGSWGFPDDPCEVDDASVSFDAWAYENPEHLLIFAAGNLGD-DVTGCSISSPAIGKNCLAVGSSMSGAIRLSPPSGD--MDDVSDFSSVGPTTDGRIKPDVVAPGHYVFSAANGGQGS--CELQLNSGTSMSCPLTAGAAALVRQYFVDG-FHSADAEARGLCSASEKTTAASDGVEFACEAFVPTGALIK 744
            CLSD+ +ETL +  G+A+GA +++ D+     GL +VLG  +WE     G ++HS S G  D  C   ++ + +D + YENPE+LLIFAAGN G+ + + C+++SPAIGKN LAVG+S SG  R+    G   +D V+DFSS G TTDGRIKP+VVAPG  V+SAA+ G  S  C L    GTSMSCP+ AGAAA+VRQYFVD  F++AD  ARG CS         DG  F CE F P+ A +K
Sbjct:  548 CLSDEVDETLTKNGGMAQGAKLSIFDVFFEVFGLIEVLGNGVWEPCLEAGCKVHSLSLG-GDTLCTPGESEILYDDFMYENPENLLIFAAGNDGETERSVCTMASPAIGKNVLAVGASTSGDTRVISTEGGAGIDMVADFSSYGFTTDGRIKPEVVAPGDMVYSAASDGTDSHSCRLWAYQGTSMSCPIVAGAAAMVRQYFVDETFYTADVTARGFCS---------DG--FICEGFSPSAATVK 780          
BLAST of mRNA_H-paniculata_contig21293.5587.1 vs. uniprot
Match: D8LNG6_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG6_ECTSI)

HSP 1 Score: 187 bits (475), Expect = 1.220e-50
Identity = 120/256 (46.88%), Postives = 155/256 (60.55%), Query Frame = 1
Query:    1 YDCDTYWPVHCLSDDREETLKEASGVARGATIAVLDL--GGSEGLHQVLGGHMWEAAAGTGARLHSGSWGFPDDPCEVDDASVSFDAWAYENPEHLLIFAAGNLGD-DVTGCSISSPAIGKNCLAVGSSMSGAIRLSPPSG--DMDDVSDFSSVGPTTDGRIKPDVVAPGHYVFSAANGGQG--SCELQLNSGTSMSCPLTAGAAALVRQYFVDG-FHSADAEARGLCSASEKTTAASDGVEFACEAFVPTGALIK 744
            Y CD      CLSDD  ETL    G+A+GA +A+ D+  GG +    + G ++WE     G +LHS S G  D  C +    +  D + YEN E+LLIFAAGN G  + + C+I++P IGKN LA+G+S SG  R+    G   +D V++FSS G TTD RIKP+VVAPG  V+SAA+ G    SC L    GTSMSCP+ AGAAA++RQYFVD  F++AD  ARG CS         DG  F CE F P+ A +K
Sbjct:  502 YGCDNSTDTTCLSDDVPETLSNNGGMAQGAKLAIFDVFYGGYDASSSI-GNNLWEVCTEAGCKLHSNSLG-ADFECSIASWDILNDQFMYENAENLLIFAAGNEGGIERSTCTINTPGIGKNSLAIGASTSGDTRVISTVGATGIDTVAEFSSWGFTTDDRIKPEVVAPGDSVYSAASDGTDTHSCRLWAYEGTSMSCPIVAGAAAMIRQYFVDETFYTADVTARGFCS---------DG--FICEGFSPSAATVK 744          
BLAST of mRNA_H-paniculata_contig21293.5587.1 vs. uniprot
Match: A0A6H5JKA8_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKA8_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 1.540e-50
Identity = 119/264 (45.08%), Postives = 154/264 (58.33%), Query Frame = 1
Query:    4 DCDTYWPVHCLSDDREETLKEASGVARGATIAVLDL-GGSEGLH-QVLGGHMWEAAAGTGARLHSGSWGFPDDPCEVDDASVSFDAWAYENPEHLLIFAAGNLGDDVTGCSISSPAIGKNCLAVGSSMSGAIRLS-------PPSGD-----MDDVSDFSSVGPTTDGRIKPDVVAPGHYVFSAANGGQGS--CELQLNSGTSMSCPLTAGAAALVRQYFV-DGFHSADAEARGLCSASEKTTAASDGVEFACEAFVPTGALIK 744
            DCD     +CL DD  ETL++  GVARGA +A+ D+     G+   + G  MWE A   G++L S SWG     C+     V FD + Y N + LL+FAAGN GDD +GC++ +PA+ KN LAVG+S SG  RLS       P  GD     +D ++ FSS GPT D RIKP+VVAPG  ++SAA  G G+  C L   +GTSMS P+ AGAAALVRQYF  + F++ D E RG C +            F CE F P+ A +K
Sbjct:  652 DCDDLPEEYCLGDDEAETLQQHGGVARGAQLAIFDIINDYTGVGIDMAGNGMWEPAMEAGSKLSSNSWGIYA-YCDYLSLDVLFDDFMYRNQDQLLLFAAGNDGDDWSGCTMGTPALAKNVLAVGASTSGPGRLSFTDEDGDPTDGDSRVQDIDAMAYFSSFGPTLDNRIKPEVVAPGDMIYSAAGSGDGNYTCRLWQYAGTSMSTPIVAGAAALVRQYFKNETFYAHDVEERGFCDS------------FGCEPFAPSAATVK 902          
BLAST of mRNA_H-paniculata_contig21293.5587.1 vs. uniprot
Match: A0A6H5K365_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K365_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 2.030e-50
Identity = 116/255 (45.49%), Postives = 151/255 (59.22%), Query Frame = 1
Query:    1 YDCDTYWPVHCLSDDREETLKEASGVARGATIAVLDLG-GSEGLHQVLGGHMWEAAAGTGARLHSGSWGFPDDPCEVDDASVSFDAWAYENPEHLLIFAAGNLG-DDVTGCSISSPAIGKNCLAVGSSMSGAIRLSPPSG--DMDDVSDFSSVGPTTDGRIKPDVVAPGHYVFSAANGGQG--SCELQLNSGTSMSCPLTAGAAALVRQYFVDG-FHSADAEARGLCSASEKTTAASDGVEFACEAFVPTGALIK 744
            Y CD      CLSDD  ETL    G+A+GA +A+ D+  G       +G ++WE     G +LHS S G  D  C +    +  D + YEN EHLLIFAAGN G ++ + C+I++P IGKN LA+G+S SG  R+    G   ++ V++FSS G TTD RIKP+VVAPG  V+SAA+ G    SC L    GTSMSCP+ AGAAA++RQYF+D  F+ AD  ARG CS             F CE F P+ A +K
Sbjct:  263 YGCDNSTDTTCLSDDVPETLSNNGGMAQGAKLAIFDVFYGDYDASSSIGNNLWEVCTEAGCKLHSNSLG-ADFECSIASWDILNDQFMYENAEHLLIFAAGNEGGEERSTCTINTPGIGKNSLAIGASTSGDTRVISTVGATGINTVAEFSSWGFTTDDRIKPEVVAPGDSVYSAASDGTDTHSCRLWAYEGTSMSCPIVAGAAAMIRQYFMDETFYMADVTARGFCSDV-----------FICEGFSPSAATVK 505          
BLAST of mRNA_H-paniculata_contig21293.5587.1 vs. uniprot
Match: A0A2I6U1R2_SACJA (Subtilisin (Fragment) n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1R2_SACJA)

HSP 1 Score: 185 bits (469), Expect = 5.840e-50
Identity = 119/267 (44.57%), Postives = 155/267 (58.05%), Query Frame = 1
Query:    4 DCDTYWPVHCLSDDREETLKEASGVARGATIAVLDL--GGSEGLHQVLGGHMWEAAAGTGARLHSGSWGFPDDPCEVDDASVSFDAWAYENPEHLLIFAAGNLGDDVTG---CSISSPAIGKNCLAVGSSMSGAIRLSPPSGD------------MDDVSDFSSVGPTTDGRIKPDVVAPGHYVFSAANGGQG--SCELQLNSGTSMSCPLTAGAAALVRQYFVD-GFHSADAEARGLCSASEKTTAASDGVEFACEAFVPTGALIK 744
            DCD      CLSDD  +TL +  G+A+GA +A  D+   GS G H V G  +WE     G ++HS S G  D  C V +  V +D + Y NPE+L++ AAGN GD   G   C++ SPAIGKN LAVG++ SG  R++  S D            +D V+ FSS GPT DGRIKP+VVAPG  ++SA + G    SC L   SGTSM+CP+ AGA+A+VRQYF+D  F+ AD  ARG           SD     CE+F P+ A +K
Sbjct:  488 DCDDATDPRCLSDDVGQTLADHGGMAQGAKLAFFDVFADGSSGTHFV-GNGLWEPCLEAGCKIHSMSIG-ADFECSVCEKDVLYDDFMYNNPENLVVVAAGNAGDTEDGRTVCTMYSPAIGKNALAVGATSSGETRITKTSADGDLIDGTNGYADVDTVAQFSSYGPTQDGRIKPEVVAPGDAIYSARSDGSDNHSCRLSAKSGTSMACPIVAGASAMVRQYFMDESFYVADQAARGW----------SDDSGRRCESFSPSSATVK 742          
BLAST of mRNA_H-paniculata_contig21293.5587.1 vs. uniprot
Match: D8LU20_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU20_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 3.880e-49
Identity = 129/299 (43.14%), Postives = 162/299 (54.18%), Query Frame = 1
Query:    1 YDCDTYWPV---HCLSDDREETLKEASGVARGATIAVLDLG--GSEGLHQVLGGHMWEAAAGTGARLHSGSWGFPDDPCEVDDASVSFDAWAYENPEHLLIFAAGNLG--DDVT---GCSISSPAIGKNCLAVGSSMSGAIR-----------------------------LSP----PSGDM-----DDVSDFSSVGPTTDGRIKPDVVAPGHYVFSAANGGQG--SCELQLNSGTSMSCPLTAGAAALVRQYFVD-GFHSADAEARGLCSASEKTTAASDGVEFACEAFVPTGALIK 744
            Y+CD    +    CLSDD  E L +  GVA GA I++LD    GS+      G  +W +A  TGA++HS SWG+ D  C++ +    +D++ YENPEHLLIFAAGN G  +D+    GC+I SPA+GKN LAVG++ SG  R                             LSP    PS  M     D V+ FSS GPT DGRIKPDVVAPG  V SA++ G    SC L  N GTS SCPL AGAAALVRQYF D  F + D  +RG C+    ++         C  F P+ A +K
Sbjct:  528 YNCDGNTDIPSSECLSDDPVENLHQHGGVAPGAQISMLDASYTGSDSFALFAGNMLWYSAMETGAKIHSNSWGY-DMLCQLTENEYLYDSFMYENPEHLLIFAAGNHGGNEDIPNHEGCTIGSPALGKNILAVGATSSGPSRGTRTGEDGNLVYEEFGMTDYSPEGYPWICLSPSLGTPSASMEPAGVDTVAFFSSQGPTLDGRIKPDVVAPGDQVASASSDGTDGHSCRLLANMGTSASCPLVAGAAALVRQYFKDPSFFAKDVTSRGGCAEHSSSSQ--------CSEFAPSAATVK 817          
BLAST of mRNA_H-paniculata_contig21293.5587.1 vs. uniprot
Match: A0A6H5JQT4_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQT4_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 6.030e-49
Identity = 117/256 (45.70%), Postives = 153/256 (59.77%), Query Frame = 1
Query:    1 YDCDTYWPVHCLSDDREETLKEASGVARGATIAVLD-LGGSEGLHQVLGGHMWEAAAGTGARLHSGSWGFPDDPCEVDDASVSFDAWAYENPEHLLIFAAGNLGDDVTG-CSISSPAIGKNCLAVGSSMSGAIRLSPPSG-DMDDVSDFSSVGPTTDGRIKPDVVAPGHYVFSAANGGQ---GSCELQLNSGTSMSCPLTAGAAALVRQYFV-DGFHSADAEARGLCSASEKTTAASDGVEFA-CEAFVPTGALIK 744
            YDCD      CLSDD  ETL    G+A+GA +A+ D    + GL   +G  +WE  A    ++HS S+G  D  C +    V +D W   NPE+LLIFAAGN G+     C++SSPAI KN LAVG+S SG  RLS   G  +D V+ FSS GPT+D RIKP+V+APG  ++SAA+ G     SC L   +GTSMS P+ AGA+A++RQYF+ + F + D  ARG C             E+A CEAF P+ A +K
Sbjct:  565 YDCDVLETEKCLSDDVAETLTNNGGMAQGAKLAIFDAFYDNFGLSPFVGNGLWEPCAEADCKIHSNSYG-GDFECSLGPNDVLYDGWMVSNPENLLIFAAGNDGERRRSTCTMSSPAIAKNVLAVGASTSGDTRLSATPGLGIDTVAVFSSYGPTSDSRIKPEVLAPGDAIYSAASDGSMDSHSCRLWAYAGTSMSTPIVAGASAMIRQYFMNETFFATDMTARGFCD------------EWAGCEAFSPSSATLK 807          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21293.5587.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBB4_9PHAE3.700e-11570.80Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
D8LK25_ECTSI1.770e-11069.48Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
D8LBZ2_ECTSI1.030e-5346.04Subtilisin (Fragment) n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5K229_9PHAE1.620e-5249.80Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A... [more]
D8LNG6_ECTSI1.220e-5046.88Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5JKA8_9PHAE1.540e-5045.08Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
A0A6H5K365_9PHAE2.030e-5045.49Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
A0A2I6U1R2_SACJA5.840e-5044.57Subtilisin (Fragment) n=1 Tax=Saccharina japonica ... [more]
D8LU20_ECTSI3.880e-4943.14Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5JQT4_9PHAE6.030e-4945.70Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21293contigH-paniculata_contig21293:214..2516 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score194.1
Seed ortholog evalue7.8e-47
Seed eggNOG ortholog2880.D8LNG5
Hectar predicted targeting categoryother localisation
EggNOG free text desc.tripeptidyl-peptidase activity
EggNOG OGsCOG1404@1,KOG1114@2759
Ec32 ortholog descriptionKP-43 peptidase
Ec32 orthologEc-06_007900.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size759
Cds size759
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21293.5587.1prot_H-paniculata_contig21293.5587.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig21293 214..2516 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929570.086779-CDS-H-paniculata_contig21293:213..4711622929570.086779-CDS-H-paniculata_contig21293:213..471Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21293 214..471 -
1691480918.203685-CDS-H-paniculata_contig21293:213..4711691480918.203685-CDS-H-paniculata_contig21293:213..471Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21293 214..471 -
1622929570.1168225-CDS-H-paniculata_contig21293:966..12001622929570.1168225-CDS-H-paniculata_contig21293:966..1200Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21293 967..1200 -
1691480918.2174392-CDS-H-paniculata_contig21293:966..12001691480918.2174392-CDS-H-paniculata_contig21293:966..1200Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21293 967..1200 -
1622929570.1327446-CDS-H-paniculata_contig21293:2249..25161622929570.1327446-CDS-H-paniculata_contig21293:2249..2516Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21293 2250..2516 -
1691480918.2251308-CDS-H-paniculata_contig21293:2249..25161691480918.2251308-CDS-H-paniculata_contig21293:2249..2516Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21293 2250..2516 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig21293.5587.1

>prot_H-paniculata_contig21293.5587.1 ID=prot_H-paniculata_contig21293.5587.1|Name=mRNA_H-paniculata_contig21293.5587.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=253bp
YDCDTYWPVHCLSDDREETLKEASGVARGATIAVLDLGGSEGLHQVLGGH
MWEAAAGTGARLHSGSWGFPDDPCEVDDASVSFDAWAYENPEHLLIFAAG
NLGDDVTGCSISSPAIGKNCLAVGSSMSGAIRLSPPSGDMDDVSDFSSVG
PTTDGRIKPDVVAPGHYVFSAANGGQGSCELQLNSGTSMSCPLTAGAAAL
VRQYFVDGFHSADAEARGLCSASEKTTAASDGVEFACEAFVPTGALIKVR
GG*
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mRNA from alignment at H-paniculata_contig21293:214..2516-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig21293.5587.1 ID=mRNA_H-paniculata_contig21293.5587.1|Name=mRNA_H-paniculata_contig21293.5587.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2303bp|location=Sequence derived from alignment at H-paniculata_contig21293:214..2516- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TACGATTGCGACACGTACTGGCCGGTACACTGCCTGTCGGATGACCGTGA GGAGACGCTGAAGGAGGCCAGCGGCGTCGCCCGGGGGGCCACGATCGCGG TGCTCGACCTGGGTGGGTCGGAGGGCCTGCACCAAGTTCTCGGGGGACAC ATGTGGGAGGCCGCCGCAGGGACGGGAGCAAGGCTACACTCCGGTTCTTG GGGCTTTCCTGATGACCCGTGCGAGGTGGACGATGCGTCTGTTTCTTTCG ACGCTTGGGCGTATGAGGTGAGAGTTGGGATTCATATTGTAACTCTATTG TATAAAGTGAGCTTGTGCAGCTCTCATTCGTCAGTCAACAACCCACTTGC CGCACCTAGTGGAAGCTAAAGCTCTAAGGCTCATATAAAGACTACATTGT ACCCATGTTAACGTTGTGCGGCTGACTTCAAACTTCATTTGTGTACACTG ATCATGAGCAAAATTAGATCATGACCAATAAGAGGGGCAGCAGAACCCAC TTTACCACAGTTGGTGTAAGTACAGTAGATCTATAATGCTTGTAATAATT TCATCTCACCCATGTTAAGCTTATGCAGCTCACCTTAAATGTCGGTTGTG CACAATTTATCAGCGAAATGATACCAAATAAGGGGTGCAGCAGAGTGCGG CGAGTTGTTGGTTGGAACGTGGAGGCGAATGATGGCGGTGGTGGCGTACA TGGAGGGGCAATTGACCGTTTTTTTAGTTATTTTCAGATATCTTCAAATT GTGAAAAAGAGTGCTTGTTATCACTGTTTCGCCAAATTTCCAGAGGGGAC GGGAGTCATCATTCTGCTGTTAGCACAGGGTGTTGCTTCTGCAGAAAATT ACGTGTTTCCAAATGGTATCAGGTGCATATATCAAATATACGTTGTGTGG AGCATGTTTCTAGCGCTTGCAGGGTTCCTGACCCCTGTCCCCCTACAGAA TATCCAGAGGCGTTTCTCTGTTCCTTTTTTGTTGGGAGAGCTTCTCTAGC TGCTTCTTCCGACCCTGCATAGGCGTCTATTCACAAGAGATAACAGTAAC CGAGTGCGTACTCCGCACGACGTACATTCCAAACCTTTGTGACTGTGTGT GGCCAATGACGAGAGGGGTGTCGGCCGCCACTCTCTCGCGAGGGCGTCGT GTCCTTAACATAGCTCTCACCAATTGGAATGCCCCCCCCCCTCCTCTTCC ATTTTTTGTTTCATTTGATTCCTTTTGTGTTGTTTTTTTCGTGTCTTGCC GTCGCCCGTCATATATTCATCACTATCCATCGTCGTTTTCATCATCGTCG TCATCGCCGTCGTCAGAACCCCGAGCACCTGCTTATCTTCGCAGCGGGTA ACCTAGGAGACGACGTCACTGGGTGCAGCATCTCATCTCCTGCCATCGGA AAGAATTGCCTGGCGGTGGGCTCTTCGATGTCGGGGGCGATTCGGCTCTC CCCTCCCTCGGGTGACATGGACGACGTGTCGGATTTCAGCAGCGTCGGCC CGACGACCGACGGGAGGATCAAGCCTGATGTCGTCGCGCCGGGACACTAT GTAAGTTGTTGTGTCGAGCTTTATATTGGCAGTGCCCATGTCGACCGAGA AATGGGGATTTATTTACGAATTGAGATGGGGACGGAAGGGGGAGAGAAGG TATCACTGTGTCATTCGCATGTGTACTGTAGGTAAAACATGTGTCTGATC TAATACGATACGATGCGATTCGTGTTTGGTTTTAATCAAGGGACGGTGTG TATTGGAGGTTGGACTTGTTATTATGAGGTGCTTGGGGTTCTTATTGCCG TTTTTGTCGCATTGTGTTGTGAGGGGATTTTGCTGAGTCCTTGTTCTTCT TTTGTGATATTGTAGTTCTTGAGTGGTAGGGCCGGTCGTTCTCAAAACGT CGCGCCGTGGTGTTCAATTAAGGGTGTGTATAATAGGCAAGCCAGTCTGA GGTAAGTGTTATCCCGTGATGTATTATTCGTTGACTGTCCTCAGGATGGA TGTATATACATACTTCAATGATTATATGTCGCCCCTGCCCTGCAGGTTTT CAGTGCAGCCAACGGCGGGCAGGGTTCCTGCGAGCTGCAGCTGAACTCCG GAACGTCCATGTCCTGCCCGTTGACGGCGGGCGCGGCCGCGCTGGTGCGA CAGTATTTCGTCGACGGGTTTCACTCGGCCGACGCGGAAGCTCGGGGACT GTGTAGCGCCTCGGAGAAAACAACTGCCGCGAGCGATGGTGTTGAGTTTG CCTGCGAGGCCTTTGTTCCAACAGGGGCACTCATTAAGGTCAGAGGAGGG TGA
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Coding sequence (CDS) from alignment at H-paniculata_contig21293:214..2516-

>mRNA_H-paniculata_contig21293.5587.1 ID=mRNA_H-paniculata_contig21293.5587.1|Name=mRNA_H-paniculata_contig21293.5587.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1518bp|location=Sequence derived from alignment at H-paniculata_contig21293:214..2516- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TACGATTGCGACACGTACTGGCCGGTACACTGCCTGTCGGATGACCGTGA
GGAGACGCTGAAGGAGGCCAGCGGCGTCGCCCGGGGGGCCACGATCGCGG
TGCTCGACCTGGGTGGGTCGGAGGGCCTGCACCAAGTTCTCGGGGGACAC
ATGTGGGAGGCCGCCGCAGGGACGGGAGCAAGGCTACACTCCGGTTCTTG
GGGCTTTCCTGATGACCCGTGCGAGGTGGACGATGCGTCTGTTTCTTTCG
ACGCTTGGGCGTATGAGTACGATTGCGACACGTACTGGCCGGTACACTGC
CTGTCGGATGACCGTGAGGAGACGCTGAAGGAGGCCAGCGGCGTCGCCCG
GGGGGCCACGATCGCGGTGCTCGACCTGGGTGGGTCGGAGGGCCTGCACC
AAGTTCTCGGGGGACACATGTGGGAGGCCGCCGCAGGGACGGGAGCAAGG
CTACACTCCGGTTCTTGGGGCTTTCCTGATGACCCGTGCGAGGTGGACGA
TGCGTCTGTTTCTTTCGACGCTTGGGCGTATGAGAACCCCGAGCACCTGC
TTATCTTCGCAGCGGGTAACCTAGGAGACGACGTCACTGGGTGCAGCATC
TCATCTCCTGCCATCGGAAAGAATTGCCTGGCGGTGGGCTCTTCGATGTC
GGGGGCGATTCGGCTCTCCCCTCCCTCGGGTGACATGGACGACGTGTCGG
ATTTCAGCAGCGTCGGCCCGACGACCGACGGGAGGATCAAGCCTGATGTC
GTCGCGCCGGGACACTATAACCCCGAGCACCTGCTTATCTTCGCAGCGGG
TAACCTAGGAGACGACGTCACTGGGTGCAGCATCTCATCTCCTGCCATCG
GAAAGAATTGCCTGGCGGTGGGCTCTTCGATGTCGGGGGCGATTCGGCTC
TCCCCTCCCTCGGGTGACATGGACGACGTGTCGGATTTCAGCAGCGTCGG
CCCGACGACCGACGGGAGGATCAAGCCTGATGTCGTCGCGCCGGGACACT
ATGTTTTCAGTGCAGCCAACGGCGGGCAGGGTTCCTGCGAGCTGCAGCTG
AACTCCGGAACGTCCATGTCCTGCCCGTTGACGGCGGGCGCGGCCGCGCT
GGTGCGACAGTATTTCGTCGACGGGTTTCACTCGGCCGACGCGGAAGCTC
GGGGACTGTGTAGCGCCTCGGAGAAAACAACTGCCGCGAGCGATGGTGTT
GAGTTTGCCTGCGAGGCCTTTGTTCCAACAGGGGCACTCATTAAGGTCAG
AGGAGGGTGAGTTTTCAGTGCAGCCAACGGCGGGCAGGGTTCCTGCGAGC
TGCAGCTGAACTCCGGAACGTCCATGTCCTGCCCGTTGACGGCGGGCGCG
GCCGCGCTGGTGCGACAGTATTTCGTCGACGGGTTTCACTCGGCCGACGC
GGAAGCTCGGGGACTGTGTAGCGCCTCGGAGAAAACAACTGCCGCGAGCG
ATGGTGTTGAGTTTGCCTGCGAGGCCTTTGTTCCAACAGGGGCACTCATT
AAGGTCAGAGGAGGGTGA
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