mRNA_H-paniculata_contig21277.5579.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig21277.5579.1 vs. uniprot
Match: A0A6H5K175_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K175_9PHAE) HSP 1 Score: 291 bits (746), Expect = 8.740e-90 Identity = 141/195 (72.31%), Postives = 151/195 (77.44%), Query Frame = 1
Query: 1 IFHESCFKIVDPQSEKEDGDVLRFGEEISLVDDRGMVWNNKDGRLHGRLGPSLFGNGGHMQLKFLKKIDPSSENKEAXXXXXXXXXXXXXXXXTEGIRGSSKEGPAAIKYGDTCELIAKKIRPRREGVIRAPVTHFRRRHQIQLGGYLRSDGKGTTCAFTIHHSPPRISMVSVYSFSADGTVTDTHTHYKIPWNQ 585
IFHE CFKIVDP SEKEDGDVL FGEEISLVDDRGMVWNNKDGRLHGRLGPSLFGNGGHM+LK P E +G G E AAI YGD+CE++AKK+RP REGV+RAPVTHFRRRHQIQLGGYLRSDGKG CAFTIHH+PPR+SMVSVYSFS+DGTV DTHTHYKIPWNQ
Sbjct: 322 IFHECCFKIVDPHSEKEDGDVLHFGEEISLVDDRGMVWNNKDGRLHGRLGPSLFGNGGHMRLKLCNTPKPPPETSRMVRSSSTPASTVQ-----DGGAGREGEDAAAIFYGDSCEMVAKKVRPHREGVVRAPVTHFRRRHQIQLGGYLRSDGKGYACAFTIHHAPPRVSMVSVYSFSSDGTVADTHTHYKIPWNQ 511
BLAST of mRNA_H-paniculata_contig21277.5579.1 vs. uniprot
Match: D8LFY5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFY5_ECTSI) HSP 1 Score: 218 bits (555), Expect = 2.370e-65 Identity = 107/161 (66.46%), Postives = 120/161 (74.53%), Query Frame = 1
Query: 124 DGRLHGRLGPSLFGNGGHMQLKFLKKIDPSSENKEAXXXXXXXXXXXXXXXXTEGIRGSSKEGP---AAIKYGDTCELIAKKIRPRREGVIRAPVTHFRRRHQIQLGGYLRSDGKGTTCAFTIHHSPPRISMVSVYSFSADGTVTDTHTHYKIPWNQVKRH 597
DGRLHGRLGPSLFGNGGHM+LK K P E+ G+ +EG AAI YGD+CE++AKK+RP REGV+RAPVTHFRRRHQIQLGGYLRSDGKG CAFTIHH+PPR+SMVSVYSFSADGTV DTHTHYKIPWNQVK++
Sbjct: 324 DGRLHGRLGPSLFGNGGHMRLKLCKTPKPPPESSRPVRSSPTPASPVQDG-------GAGREGEDAAAAILYGDSCEMVAKKVRPHREGVVRAPVTHFRRRHQIQLGGYLRSDGKGYACAFTIHHAPPRVSMVSVYSFSADGTVADTHTHYKIPWNQVKKY 477
BLAST of mRNA_H-paniculata_contig21277.5579.1 vs. uniprot
Match: A0A8K1FMY8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMY8_PYTOL) HSP 1 Score: 80.1 bits (196), Expect = 5.170e-14 Identity = 52/193 (26.94%), Postives = 88/193 (45.60%), Query Frame = 1
Query: 1 IFHESCFKIVDPQSEKEDGDVLRFGEEISLVDDRGMVWNNKDGRLHGRLGPSLFGNGGHMQLKFLKKIDPSSENKE----AXXXXXXXXXXXXXXXXTEGIRGSSK----------------EGPAAIKYGDTCELIAKKIRPRREGVIRAPVTHFRRRHQIQLGGYLRSDGKGTTCAFTIHHSPPRISMVSV 519
+F+E + ++DP + K GD++ +G+ + LV+ GMVWNNK G + G +GP G G M + F + P S+ ++ T I SS +GP +++GD ++ R + +T+F++ +GGY+ DGKGT FTI + PRI +++
Sbjct: 67 LFYEDEYLVLDPANVKAPGDIVEYGQPVVLVNQHGMVWNNKTGGITGYVGPRQRGIPGEMFVSFRRWSPPLSKKEKRESATTTAPLSGPPGSERDVSTASINSSSSLISSGSSSSVMFDGVTDGP--VRFGDQHVVVTVVESNRHSQMFNKRLTNFKKPTSKIVGGYICCDGKGTELRFTIRPAAPRIEQITM 257
BLAST of mRNA_H-paniculata_contig21277.5579.1 vs. uniprot
Match: A0A484E928_BRELC (CRAL-TRIO domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E928_BRELC) HSP 1 Score: 78.6 bits (192), Expect = 1.740e-13 Identity = 51/179 (28.49%), Postives = 81/179 (45.25%), Query Frame = 1
Query: 1 IFHESCFKIVDPQSEKEDGDVLRFGEEISLVDDRGMVWNNKDGRLHGRLGPSLFGNGGHMQLKFLKKIDPSSENKEAXXXXXXXXXXXXXXXXTEGIRGSSKEGPAA------IKYGDTCELIAKKIRPRREGVIRAPVTHFRRRHQIQLGGYLRSDGKGTTCAFTIHHSPPRISMVSV 519
F E F ++ P +++ +GD + +G+ + LV+ RGMVWNNK G + G +GP G G + + F+K + K + I GSS + I +GDT I R + +++F++ +GGY+ DGKGT FTI P I +S+
Sbjct: 58 FFTEDAFLVLHPSNQRTEGDKVFYGDALVLVNQRGMVWNNKTGGITGYIGPRPRGVPGEIFVSFIKVPEGVRVTKSSKKEKGDKADRRMSSSSALSISGSSPMSEVSEATTEPICFGDTNVAIEVVESNRHSQMFNKRLSNFKKPTSRIMGGYICCDGKGTELRFTIWPMKPTIEQISM 236
BLAST of mRNA_H-paniculata_contig21277.5579.1 vs. uniprot
Match: A0A2P4X6Q8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X6Q8_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 7.100e-13 Identity = 50/175 (28.57%), Postives = 80/175 (45.71%), Query Frame = 1
Query: 1 IFHESCFKIVDPQSEKEDGDVLRFGEEISLVDDRGMVWNNKDGRLHGRLGPSLFGNGGHMQLKFLK-KIDPSSENKE-AXXXXXXXXXXXXXXXXTEGIRGSSKEGPAAIKYGDTCELIAKKIRPRREGVIRAPVTHFRRRHQIQLGGYLRSDGKGTTCAFTIHHSPPRISMVSV 519
+F E F+++ P ++ +GD +++GE + LV+ GMVWNNK G + G +GP G G M + F K + KE T G S E + +GD+ I R + +++F++ GGY+ DGKGT F I + P+I +S+
Sbjct: 59 LFTEDEFQVLHPTGQRSEGDQVQYGEPLVLVNQHGMVWNNKTGGITGYVGPRPRGVAGEMFVCFTKVPAGVGVKKKEKGDKLDKLTASGSTSVLSTSGSTSESSEEMGFVCFGDSNVAITVVESNRHSQMFNKRLSNFKKPTSHIAGGYICCDGKGTELRFAIWPAKPKIEQISM 233
BLAST of mRNA_H-paniculata_contig21277.5579.1 vs. uniprot
Match: H3GQC8_PHYRM (CRAL-TRIO domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GQC8_PHYRM) HSP 1 Score: 74.3 bits (181), Expect = 5.030e-12 Identity = 49/183 (26.78%), Postives = 80/183 (43.72%), Query Frame = 1
Query: 1 IFHESCFKIVDPQSEKEDGDVLRFGEEISLVDDRGMVWNNKDGRLHGRLGPSLFGNGGHMQLKFLK----------KIDPSSENKEAXXXXXXXXXXXXXXXXTEGIRGSSKEGPAAIKYGDTCELIAKKIRPRREGVIRAPVTHFRRRHQIQLGGYLRSDGKGTTCAFTIHHSPPRISMVSV 519
+F E F ++ P ++ GD + +GE + LV+ GMVWNNK G + G +GP G G M + F K K + ++ +E ++ GP + +GD I R + +++F++ GGY+ DGKGT FTI + PR+ +S+
Sbjct: 57 LFTEDEFLVLHPTDQRASGDHVLYGEPLVLVNQHGMVWNNKTGGITGYVGPRPRGVPGEMFVCFTKVPPGVGVKSNKREKHDNKQDKLTPSASTSVLSASGSLSESFESGAEAGP--VCFGDANVAITVMESNRHSQMFNKRLSNFKKPTSHIAGGYICCDGKGTELRFTIWPTKPRVEQISM 237
BLAST of mRNA_H-paniculata_contig21277.5579.1 vs. uniprot
Match: A0A2D4CF83_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CF83_PYTIN) HSP 1 Score: 70.5 bits (171), Expect = 6.560e-11 Identity = 59/187 (31.55%), Postives = 100/187 (53.48%), Query Frame = 1
Query: 1 IFHESCFKIVDPQSEKEDGDVLRFGEEISLVDDRGMVWNNKDGRLHGRLGPSLFGNGGHMQLKFLKKIDPSSENKEAXXXXXXXXXXXXXXXXTEGIRGSSKEGP--------------AAIKYGDTCELIAKKIRPRREGVIRAPVTHFRRRHQIQLGGYLRSDGKGTTCAFTIHHSPPRISMVSV 519
+F+E + ++DP + G+++ +G + LV+ GMVWNNK G + G +GP G M + F ++ + ++ +K XXXXXXXXXXXXXX T R +S + +++GDT +I+ R + +T+F++ +GGY+ DGKG+ FTI + P++ +S+
Sbjct: 63 LFNEDEYLVLDPTDRRAPGEMVEYGHTVVLVNQHGMVWNNKTGGITGYIGPRPRNIAGEMFVAF-RRGNSANLSKXXXXXXXXXXXXXXXXSPTALDRENSTASTLSSTSTSNLLEPDGSVVRFGDTDVVISVVESNRHSSMFNKHLTNFKKPTSKIVGGYICCDGKGSVMRFTIFPARPKVEQISM 248
BLAST of mRNA_H-paniculata_contig21277.5579.1 vs. uniprot
Match: A0A2D4C791_PYTIN (CRAL-TRIO domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C791_PYTIN) HSP 1 Score: 70.5 bits (171), Expect = 1.070e-10 Identity = 59/187 (31.55%), Postives = 100/187 (53.48%), Query Frame = 1
Query: 1 IFHESCFKIVDPQSEKEDGDVLRFGEEISLVDDRGMVWNNKDGRLHGRLGPSLFGNGGHMQLKFLKKIDPSSENKEAXXXXXXXXXXXXXXXXTEGIRGSSKEGP--------------AAIKYGDTCELIAKKIRPRREGVIRAPVTHFRRRHQIQLGGYLRSDGKGTTCAFTIHHSPPRISMVSV 519
+F+E + ++DP + G+++ +G + LV+ GMVWNNK G + G +GP G M + F ++ + ++ +K XXXXXXXXXXXXXX T R +S + +++GDT +I+ R + +T+F++ +GGY+ DGKG+ FTI + P++ +S+
Sbjct: 63 LFNEDEYLVLDPTDRRAPGEMVEYGHTVVLVNQHGMVWNNKTGGITGYIGPRPRNIAGEMFVAF-RRGNSANLSKXXXXXXXXXXXXXXXXSPTALDRENSTASTLSSTSTSNLLEPDGSVVRFGDTDVVISVVESNRHSSMFNKHLTNFKKPTSKIVGGYICCDGKGSVMRFTIFPARPKVEQISM 248
BLAST of mRNA_H-paniculata_contig21277.5579.1 vs. uniprot
Match: A0A0P1AQ35_PLAHL (Phosphatidylinositol transfer protein SEC14 and related proteins n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AQ35_PLAHL) HSP 1 Score: 67.8 bits (164), Expect = 8.850e-10 Identity = 47/181 (25.97%), Postives = 82/181 (45.30%), Query Frame = 1
Query: 1 IFHESCFKIVDPQSEKEDGDVLRFGEEISLVDDRGMVWNNKDGRLHGRLGPSLFGNGGHMQLKFLKKIDP----SSENKEAXXXXXXXXXXXXXXXXTEGIRGSSKEGP----AAIKYGDTCELIAKKIRPRREGVIRAPVTHFRRRHQIQLGGYLRSDGKGTTCAFTIHHSPPRISMVSV 519
+F E F ++ P ++ G+ + +GE + LV+ GMVWNNK G + G +GP G G + + F K + S K+ + + S E P + + +GDT I R + +++F++ +GGY+ DG+GT F+I + P+I +S+
Sbjct: 58 LFTEDEFLVLHPSDQRSHGENVLYGEPLVLVNQHGMVWNNKTGGITGYVGPRPRGVPGEIFVCFTKVPEGVGVIKSSKKDKVNKVERSTIRASFSASSTSDKLSMSEYPETESSPVYFGDTNVAITVVESNRHSQMFNKRLSNFKKPTSRIVGGYICCDGRGTELRFSIWPTKPKIEQISM 238
BLAST of mRNA_H-paniculata_contig21277.5579.1 vs. uniprot
Match: W2FT49_PHYPR (CRAL-TRIO domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=W2FT49_PHYPR) HSP 1 Score: 66.6 bits (161), Expect = 2.230e-9 Identity = 58/180 (32.22%), Postives = 90/180 (50.00%), Query Frame = 1
Query: 1 IFHESCFKIVDPQSEKEDGDVLRFGEEISLVDDRGMVWNNKDGRLHGRLGPSLFGNGGHMQLKFLK---KIDPSSENKEAXXXXXXXXXXXXXXXXTEGIRGSSKEGPAA----IKYGDTCELIAKKIRPRREGVIRAPVTHFRRRHQIQLGGYLRSDGKGTTCAFTIHHSPPRISMVSV 519
+F E F ++ P ++ G+ + +GE + L++ GMVWNNK G + G +GP G G M + F K + + K+ XXXXXXXXXXXX + + S E P + +GD I R + +++F++ GGY+ DGKGT F I + P+I +S+
Sbjct: 58 LFTEDEFLVLHPSGQRSQGENVLYGEPLVLINQHGMVWNNKTGGITGYVGPRPRGVPGEMYVCFTKIPAGVGVTKNKKDXXXXXXXXXXXXXTLSASGSL--SMSENPETETGPVCFGDANVAITVVESNRHSQMFNKRLSNFKKPTSKIAGGYICCDGKGTELRFAIWPAKPKIEQISM 235 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21277.5579.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig21277.5579.1 >prot_H-paniculata_contig21277.5579.1 ID=prot_H-paniculata_contig21277.5579.1|Name=mRNA_H-paniculata_contig21277.5579.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=199bp IFHESCFKIVDPQSEKEDGDVLRFGEEISLVDDRGMVWNNKDGRLHGRLGback to top mRNA from alignment at H-paniculata_contig21277:172..2781+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig21277.5579.1 ID=mRNA_H-paniculata_contig21277.5579.1|Name=mRNA_H-paniculata_contig21277.5579.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2610bp|location=Sequence derived from alignment at H-paniculata_contig21277:172..2781+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig21277:172..2781+ >mRNA_H-paniculata_contig21277.5579.1 ID=mRNA_H-paniculata_contig21277.5579.1|Name=mRNA_H-paniculata_contig21277.5579.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1194bp|location=Sequence derived from alignment at H-paniculata_contig21277:172..2781+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |