mRNA_H-paniculata_contig21252.5571.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig21252.5571.1 vs. uniprot
Match: A0A6H5KRC5_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRC5_9PHAE) HSP 1 Score: 172 bits (436), Expect = 7.520e-48 Identity = 85/102 (83.33%), Postives = 90/102 (88.24%), Query Frame = 1
Query: 13 QAVQPVIVRYHFRD--LDPSYPAVAPSLGALALRVMCQVWNCMEVEYLPVYVPTLEDRSNPGVFALHVQEYMSRSLGVPATQHAFEDVALQFQAMKMNLDPE 312
Q +QPV VRY D LDPSYPAV+PSL ALALRVMCQVWNCME+EYLPVYVPT EDR NP +FA HVQEYMSRSLGVPATQHAFEDVALQFQAMKMNL+PE
Sbjct: 302 QNIQPVTVRYPRTDGHLDPSYPAVSPSLVALALRVMCQVWNCMEIEYLPVYVPTAEDRENPTLFAQHVQEYMSRSLGVPATQHAFEDVALQFQAMKMNLNPE 403
BLAST of mRNA_H-paniculata_contig21252.5571.1 vs. uniprot
Match: D7FLI2_ECTSI (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLI2_ECTSI) HSP 1 Score: 169 bits (428), Expect = 6.480e-47 Identity = 84/102 (82.35%), Postives = 89/102 (87.25%), Query Frame = 1
Query: 13 QAVQPVIVRYHFRD--LDPSYPAVAPSLGALALRVMCQVWNCMEVEYLPVYVPTLEDRSNPGVFALHVQEYMSRSLGVPATQHAFEDVALQFQAMKMNLDPE 312
Q +QPV VRY D LDPSYPAV+PSL ALALRVMCQVWNCME+EYLPVYVPT EDR N +FA HVQEYMSRSLGVPATQHAFEDVALQFQAMKMNL+PE
Sbjct: 300 QNIQPVTVRYPRTDGHLDPSYPAVSPSLVALALRVMCQVWNCMEIEYLPVYVPTAEDRDNSTLFAQHVQEYMSRSLGVPATQHAFEDVALQFQAMKMNLNPE 401
BLAST of mRNA_H-paniculata_contig21252.5571.1 vs. uniprot
Match: A0A835YMY3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMY3_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.350e-28 Identity = 53/92 (57.61%), Postives = 72/92 (78.26%), Query Frame = 1
Query: 13 QAVQPVIVRYHFRDLDPSYPAVAPSLGALALRVMCQVWNCMEVEYLPVYVPTLEDRSNPGVFALHVQEYMSRSLGVPATQHAFEDVALQFQA 288
++VQPV+V+Y++ LDPS+PAV+ L LA+R+MCQV+N +EV +L VY P+ E+ + P +FA +VQ MSR LGVPATQHA+ED ALQF A
Sbjct: 255 ESVQPVLVKYYYEHLDPSFPAVSAKLHLLAIRMMCQVYNTLEVRFLDVYTPSAEEIAEPSLFASNVQRLMSRELGVPATQHAYEDAALQFAA 346
BLAST of mRNA_H-paniculata_contig21252.5571.1 vs. uniprot
Match: L8H4L3_ACACA (1acylglycerophosphocholine O-acyltransferase 1, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H4L3_ACACA) HSP 1 Score: 97.1 bits (240), Expect = 2.280e-21 Identity = 50/94 (53.19%), Postives = 72/94 (76.60%), Query Frame = 1
Query: 19 VQPVIVRYHFR--DLDPSYPAVAPSLGALALRVMCQVWNCMEVEYLPVYVPTLEDRSNPGVFALHVQEYMSRSLGVPATQHAFEDVALQFQAMK 294
+QPV+VRY F+ D+ S PA+ P+L L R MCQ +N MEV+YLPVY P+ E++S+P +FA +V++ M+R+LGVP T+HA+EDV LQ +A+K
Sbjct: 224 IQPVVVRYPFKYHDVSASDPAL-PTLWLL-FRTMCQFYNRMEVQYLPVYYPSDEEKSDPKLFANNVRQVMARALGVPTTEHAYEDVMLQGEAVK 315
BLAST of mRNA_H-paniculata_contig21252.5571.1 vs. uniprot
Match: H3GIP8_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GIP8_PHYRM) HSP 1 Score: 89.7 bits (221), Expect = 9.680e-19 Identity = 41/85 (48.24%), Postives = 63/85 (74.12%), Query Frame = 1
Query: 22 QPVIVRYHFRDLDPSYPAVAPSLGALALRVMCQVWNCMEVEYLPVYVPTLEDRSNPGVFALHVQEYMSRSLGVPATQHAFEDVAL 276
QPV++RY ++ D S+P L LALRV+CQV+N +EVE LP Y P+ ++++P ++A +V++YM+ +LGVP T HA+EDVA+
Sbjct: 279 QPVVLRYPYKHFDMSWPPGVSGLY-LALRVLCQVYNRLEVEILPAYYPSEREQNDPQLYANNVRDYMAHALGVPTTNHAYEDVAM 362
BLAST of mRNA_H-paniculata_contig21252.5571.1 vs. uniprot
Match: G4ZXC2_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZXC2_PHYSP) HSP 1 Score: 89.4 bits (220), Expect = 1.320e-18 Identity = 41/85 (48.24%), Postives = 63/85 (74.12%), Query Frame = 1
Query: 22 QPVIVRYHFRDLDPSYPAVAPSLGALALRVMCQVWNCMEVEYLPVYVPTLEDRSNPGVFALHVQEYMSRSLGVPATQHAFEDVAL 276
QPV++RY ++ D S+P L LALRV+CQV+N MEVE LP Y P+ ++++P ++A +V++ M+++LG+P T HAFEDVA+
Sbjct: 279 QPVVLRYPYKHFDMSWPPGVSGLY-LALRVLCQVYNRMEVEILPAYYPSQREQNDPQLYANNVRDVMAQALGIPTTNHAFEDVAM 362
BLAST of mRNA_H-paniculata_contig21252.5571.1 vs. uniprot
Match: W2REF0_PHYPN (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2REF0_PHYPN) HSP 1 Score: 88.6 bits (218), Expect = 2.460e-18 Identity = 41/85 (48.24%), Postives = 62/85 (72.94%), Query Frame = 1
Query: 22 QPVIVRYHFRDLDPSYPAVAPSLGALALRVMCQVWNCMEVEYLPVYVPTLEDRSNPGVFALHVQEYMSRSLGVPATQHAFEDVAL 276
QP+++RY ++ D S+P L LALRV+CQV+N +EVE LP Y P+ ++ +P ++A +V+E M+++LGVP T HAFEDVA+
Sbjct: 277 QPIVLRYPYKHFDMSWPPGVSGLY-LALRVLCQVYNRLEVEILPAYYPSEREQRDPQLYANNVREVMAKALGVPTTNHAFEDVAM 360
BLAST of mRNA_H-paniculata_contig21252.5571.1 vs. uniprot
Match: A0A5D6Y5U2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y5U2_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 3.330e-18 Identity = 45/91 (49.45%), Postives = 63/91 (69.23%), Query Frame = 1
Query: 22 QPVIVRYHFRDLDPSYPAVAPSLGA--LALRVMCQVWNCMEVEYLPVYVPTLEDRSNPGVFALHVQEYMSRSLGVPATQHAFEDVALQFQA 288
QPV++RY F D S+P P + LALR++CQV N +EVE+LP YVPT ++ + P ++A +V++ M+R+LGV T HAFEDVAL A
Sbjct: 255 QPVLLRYPFAHFDVSWP---PGVSGRYLALRLLCQVRNRLEVEFLPPYVPTRDEAAQPALYAENVRQAMARALGVACTNHAFEDVALLLDA 342
BLAST of mRNA_H-paniculata_contig21252.5571.1 vs. uniprot
Match: A0A3R7MQ51_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7MQ51_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 3.360e-18 Identity = 43/85 (50.59%), Postives = 60/85 (70.59%), Query Frame = 1
Query: 22 QPVIVRYHFRDLDPSYPAVAPSLGALALRVMCQVWNCMEVEYLPVYVPTLEDRSNPGVFALHVQEYMSRSLGVPATQHAFEDVAL 276
QPV++RY ++ D S+P L LALRV+CQV+N MEVE LP Y P+ ++ +P ++A V+ M+++LGVP T HAFEDVAL
Sbjct: 243 QPVVLRYPYKHFDMSWPPGVSGLY-LALRVLCQVYNRMEVEILPAYYPSEREQQDPQLYAEGVRNVMAKALGVPTTNHAFEDVAL 326
BLAST of mRNA_H-paniculata_contig21252.5571.1 vs. uniprot
Match: A0A3F2RH76_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RH76_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 3.390e-18 Identity = 43/85 (50.59%), Postives = 60/85 (70.59%), Query Frame = 1
Query: 22 QPVIVRYHFRDLDPSYPAVAPSLGALALRVMCQVWNCMEVEYLPVYVPTLEDRSNPGVFALHVQEYMSRSLGVPATQHAFEDVAL 276
QPV++RY ++ D S+P L LALRV+CQV+N MEVE LP Y P+ ++ +P ++A V+ M+++LGVP T HAFEDVAL
Sbjct: 296 QPVVLRYPYKHFDMSWPPGVSGLY-LALRVLCQVYNRMEVEILPAYYPSEREQQDPQLYAEGVRNVMAKALGVPTTNHAFEDVAL 379 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21252.5571.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig21252.5571.1 >prot_H-paniculata_contig21252.5571.1 ID=prot_H-paniculata_contig21252.5571.1|Name=mRNA_H-paniculata_contig21252.5571.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=104bp LVYAQAVQPVIVRYHFRDLDPSYPAVAPSLGALALRVMCQVWNCMEVEYLback to top mRNA from alignment at H-paniculata_contig21252:375..2881- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig21252.5571.1 ID=mRNA_H-paniculata_contig21252.5571.1|Name=mRNA_H-paniculata_contig21252.5571.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2507bp|location=Sequence derived from alignment at H-paniculata_contig21252:375..2881- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig21252:375..2881- >mRNA_H-paniculata_contig21252.5571.1 ID=mRNA_H-paniculata_contig21252.5571.1|Name=mRNA_H-paniculata_contig21252.5571.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=624bp|location=Sequence derived from alignment at H-paniculata_contig21252:375..2881- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |