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Homology
BLAST of mRNA_H-paniculata_contig2117.5543.1 vs. uniprot
Match: A0A6H5JW11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW11_9PHAE) HSP 1 Score: 364 bits (934), Expect = 7.470e-110 Identity = 289/764 (37.83%), Postives = 361/764 (47.25%), Query Frame = 2
Query: 260 NEGETVHAAPVSSLAREIGLPTWLVDIRHEAAHKQLPGLVILRLAADFLMDYLWRRYWAPQEEHLRFLWGAFDQLICRYKAVSESDPAIPCTCIVSNDGSRARPNSSHSPPSIDDANRSSPSTSKKRCQGDSQHTLSSDSASTDFQLLASPAGVAAAAGAPSTTEAPSTPSQNSKYCSMPQPRPATQSAESSMSQPTVSAPIARCGATSMGSTHKTGGGVERFAGAAETAAREIACSVTPTALSWAIVSLLADGSVSLGTGGVEDD---DGIAGQGRRDQGHLLPRSKEKYPTPGTPGVDNDKLCNRLTTRWATLLDMFHGRWRGFGAALLVRLVETLLANASRQATSIVNPAASVIGPDDGPST-RATRCRPPEGGTRNGTTIGWERQAVFIGLWVRHLLSRRWHLRSTEAKIKETLRNSAVEDGLTPDFCDRPEASWGYEEKAWADRT--APTEVLYLAAFPLNELSARCRSALSALITTRSTSIDNESSHSIEATIS----SRCAKP------------------HGAHWALPGLEAVVRCMDSAL-GKNGTVAYTDRHRRHPTTSSDKKFV--HTRGVAEVGPTAARDAELQVGVLETSARQIGALPHKKDKVMDEGSLTEGEAVSEEGSQGGDVEGACFGCVNRAEAGTVAMMDLDALEKILSGGGPTEVGSTALSAAASTISYEGTEAVGEVNRKGRSELPSVLMEGHDRVKASTARESTVNVSGNHGNGNGGAWEMVENWTPCAIGTLPGWSGAYLY 2458
+E + HAAPVSSLAREIGLPTW+VDIRHEAAHKQLPG+V LRLAADFL+DYLWRR+W+PQ EHL F+WGAFDQLICRYKA S+SD +P + S+ G RP+S KK + P G G+ S SK+ GA +M E AA EI S TPTALSWA+VSLLADG G V + G+ G R QGHLLPRS++KYPTP G+ WATLLDMFH RWRGFGAALLVRLVE LL NAS P A+V ++G S G ERQA FI +WV HLLSRRWHLR+++A+++E LR AV GL+P F EA W E WAD+ +P VL+ A FP++EL RCR ALSAL R S N + + + S C P + AHWA GL+AV + +AL G+N P+ S+ + H +G + A + + SA Q L + ++ + GE ++ S G + A G + A +AMM LD LE++L G S++L+A S + A G V G E+ R S VN G AWE+VE WTPCAIGTLPG S A L+
Sbjct: 112 HEQKAAHAAPVSSLAREIGLPTWIVDIRHEAAHKQLPGIVTLRLAADFLVDYLWRRHWSPQAEHLGFVWGAFDQLICRYKATSDSDALMPRS---SSPGHAGRPSS------------------KKPRTXXXXXXXXXXXXXXXXDXXSKPPGTPRGTGS----------SAASKF-----------------------------GAAAM-----------------EVAAHEIVLSATPTALSWAVVSLLADGG-----GRVRGEYFVGGVGGTKGRGQGHLLPRSRDKYPTP-VRGLGGGW--------WATLLDMFHSRWRGFGAALLVRLVEALLDNASS------TPGAAVNADENGRSACGGGNXXXXXXXXXXXXXXGLERQAAFIEIWVNHLLSRRWHLRTSDARVREALREEAVRAGLSPTFFQAKEALWEENESTWADKPGESPVSVLHAAYFPVHELLDRCRRALSALPAARQPSAANPRTPGDGSLVGKSERSTCPAPPSPSTADGIADDEGKNIGYSAHWARAGLDAVCHALAAALPGENAA---------SPSASAATFGLDAHRKGECDNAAAGAPSGPVVATQVAISANQEVPLCVPPTEECNQTAGPPGEVLNHCSSGGAERGDAAKGPASET-APLLAMMGLDDLERLLGGDA-----SSSLAAPGGYTSVPSSIAAGAVRESGFREV---------------GRPSEVNGD------TGRAWELVEAWTPCAIGTLPGSSAARLH 742
BLAST of mRNA_H-paniculata_contig2117.5543.1 vs. uniprot
Match: D7FGU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGU4_ECTSI) HSP 1 Score: 204 bits (519), Expect = 3.480e-55 Identity = 134/312 (42.95%), Postives = 166/312 (53.21%), Query Frame = 2
Query: 260 NEGETVHAAPVSSLAREIGLPTWLVDIRHEAAHKQLPGLVILRLAADFLMDYLWRRYWAPQEEHLRFLWGAFDQLICRYKAVSESDPAIPCTCIVSNDGSRARPNSSHSPPSIDDANRSSPSTSKKRCQGDSQHTLSSDSASTDFQLLASPAGVAAAAGAPSTTEAPSTPSQNSKYCSMPQPRPATQSAESSMSQPTVSAPIARCGATSMGSTHKTGGGVERFAGAAETAAREIACSVTPTALSWAIVSLLADGSVSLGTGGVEDDDGIAGQGRRDQGHLLPRSKEKYPTPGTPGVDNDKLCNRLTTRWATL 1195
+E + HAAPVSSLAREIGLPTW+VDIRHEAAHKQLPG+V LRLAADFL+DYLWRR+W+PQ EHL F+WGAFDQLI RYKA S+S+ +P + S+ G R SS S+++ P TP + T S+ ++ GA +M E AA EIA S TPTALSWA+V+LLADG +G G G++G R QGHLLPRS++KYPTPGTPGVD+ ++ RLT R +TL
Sbjct: 97 HEQKAAHAAPVSSLAREIGLPTWIVDIRHEAAHKQLPGIVSLRLAADFLVDYLWRRHWSPQAEHLGFVWGAFDQLIGRYKATSDSEALMPRS---SSPGHAGR---------------------------------SSXXXXXXXXXXXXXXXXXXXXDGDSSSKPPGTP------------------------RGTGSSAASKPGAAAM-----------------EVAAHEIALSATPTALSWAVVALLADGGGRVGGGDCVG--GVSGTKGRGQGHLLPRSRDKYPTPGTPGVDSRQVSRRLTARCSTL 329
BLAST of mRNA_H-paniculata_contig2117.5543.1 vs. uniprot
Match: D8LD46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD46_ECTSI) HSP 1 Score: 175 bits (443), Expect = 1.780e-45 Identity = 106/222 (47.75%), Postives = 122/222 (54.95%), Query Frame = 2
Query: 935 AAETAAREIACSVTPTALSWAIVSLLADGSVSLGTGGVEDDDGIAGQGRRDQGHLLPRSKEKYPTPGTPGVDNDKLCNRLTTRWATLLDMFHGRWRGFGAALLVRLVETLLANASRQATSIVNPAASVIGPDDGPST--RATRCRPPEGGTRNGTTIGWERQAVFIGLWVRHLLSRRWHLRSTEAKIKETLRNSAVEDGLTPDFCDRPEASWGYEEKAWADR 1594
A E AA EIA S TPTALSWA+V+LLADG G V D + G G R+QGHLLPRS++KYPTPGTPGVD+ ++ RL+ RWATLLDMFH RWRGFGAALLVRLVE LL N S P +V DDG S ERQA FI +W A+++ LR AV D L P F EA W E W D+
Sbjct: 75 AMEVAAHEIALSATPTALSWAVVALLADGG-----GRVRGGDFVGGVGGREQGHLLPRSRDKYPTPGTPGVDSRQVSRRLSARWATLLDMFHSRWRGFGAALLVRLVEALLDNDSS------TPGEAVNADDDGTSACXXXXXXXXXXXXXXXXXXXXLERQAAFIEIW---------------ARVRGALREEAVHDRLPPTFFQAKEALWEENESTWVDK 270
BLAST of mRNA_H-paniculata_contig2117.5543.1 vs. uniprot
Match: A0A835YSI0_9STRA (Las1-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSI0_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 8.070e-14 Identity = 32/59 (54.24%), Postives = 46/59 (77.97%), Query Frame = 2
Query: 278 HAAPVSSLAREIGLPTWLVDIRHEAAHKQLPGLVILRLAADFLMDYLWRRYWAPQEEHL 454
HA + +AR+IG+P+WLVD+RH+AAHK +P L RLA+ FL+DYL +RYW Q+++L
Sbjct: 108 HAISIQQIARQIGIPSWLVDLRHDAAHKDMPSLASFRLASAFLLDYLSQRYWDVQQQNL 166
BLAST of mRNA_H-paniculata_contig2117.5543.1 vs. uniprot
Match: A9UZ16_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UZ16_MONBE) HSP 1 Score: 72.8 bits (177), Expect = 7.290e-11 Identity = 37/94 (39.36%), Postives = 50/94 (53.19%), Query Frame = 2
Query: 257 DNEGETVHAAPVSSLAREIGLPTWLVDIRHEAAHKQLPGLVILRLAADFLMDYLWRRYWAPQEE---HLRFLWGAFDQLICRYKAVSESDPAIP 529
D + V A V+ LARE+G+P WLVD+RH+A H +LP ++ A D + +L RYWAPQ E H G LI + DP +P
Sbjct: 54 DQRQQAVMAHSVNRLARELGIPEWLVDLRHDATHGELPSHSLVLAAVDTIKTWLHDRYWAPQAEMVVHFEARVGELATLIWASATSTNPDPTLP 147
BLAST of mRNA_H-paniculata_contig2117.5543.1 vs. uniprot
Match: A0A5D6Y937_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y937_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 4.010e-10 Identity = 39/99 (39.39%), Postives = 56/99 (56.57%), Query Frame = 2
Query: 257 DNEGETVHAAPVSSLAREIGLPTWLVDIRHEAAHKQLPGLVILRLAADFLMDYLWRRYWAPQEEHLRF--------LWGAFDQLICRYKAVSESDPAIP 529
D+ + +A VSSLA+ IG+P W+VD+RHE+ H QLP L +LR AA L+ +L YW Q+E LR L QL+ + A +++P P
Sbjct: 104 DSAQKGAYALAVSSLAQRIGIPLWIVDLRHESTHNQLPSLPVLRFAAQHLLAWLRANYWHKQDELLRAQVRRVGDALSARIAQLLRPHDASVDAEPVAP 202
BLAST of mRNA_H-paniculata_contig2117.5543.1 vs. uniprot
Match: A0A1V9YTH2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YTH2_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 4.520e-10 Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = 2
Query: 257 DNEGETVHAAPVSSLAREIGLPTWLVDIRHEAAHKQLPGLVILRLAADFLMDYLWRRYWAPQEEHLR 457
D + +A VS+LA IG+P W+VD+RHEAAH +LP L L+LAA L +L+ YW PQE +R
Sbjct: 25 DASQKGAYAMAVSTLAMRIGIPLWVVDVRHEAAHTKLPALPTLQLAASTLRQWLFEHYWQPQESAIR 91
BLAST of mRNA_H-paniculata_contig2117.5543.1 vs. uniprot
Match: A0A2D4BX17_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BX17_PYTIN) HSP 1 Score: 74.3 bits (181), Expect = 4.980e-10 Identity = 32/60 (53.33%), Postives = 43/60 (71.67%), Query Frame = 2
Query: 278 HAAPVSSLAREIGLPTWLVDIRHEAAHKQLPGLVILRLAADFLMDYLWRRYWAPQEEHLR 457
+A VS+LA+ IG+P W+VD+RHEA H QLP L +LR AAD L+ +L YW QE+ +R
Sbjct: 105 YAMAVSALAQRIGIPLWIVDLRHEATHNQLPSLSVLRFAADHLLAWLRTNYWFKQEDAIR 164
BLAST of mRNA_H-paniculata_contig2117.5543.1 vs. uniprot
Match: T0R2P0_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0R2P0_SAPDV) HSP 1 Score: 73.6 bits (179), Expect = 7.990e-10 Identity = 33/63 (52.38%), Postives = 43/63 (68.25%), Query Frame = 2
Query: 257 DNEGETVHAAPVSSLAREIGLPTWLVDIRHEAAHKQLPGLVILRLAADFLMDYLWRRYWAPQE 445
D + +A PVS+LA IG+P W+VDIRHE+AH +LP L L+LAA L +L+ YW PQE
Sbjct: 130 DASQKGAYAMPVSTLAMRIGIPLWVVDIRHESAHTKLPALPTLQLAAQTLWKWLFEHYWQPQE 192
BLAST of mRNA_H-paniculata_contig2117.5543.1 vs. uniprot
Match: W2QXV9_PHYPN (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=W2QXV9_PHYPN) HSP 1 Score: 73.2 bits (178), Expect = 1.220e-9 Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = 2
Query: 257 DNEGETVHAAPVSSLAREIGLPTWLVDIRHEAAHKQLPGLVILRLAADFLMDYLWRRYWAPQEEHLR 457
D + +A VS+LA+ IG+P W+VD+RHE++H QLP L +LR AA L+ +L YW QE+ +R
Sbjct: 101 DGSQKGAYATAVSTLAQRIGIPLWIVDLRHESSHNQLPSLPVLRFAAQHLLAWLRSNYWGAQEDLIR 167
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 207.2 |
| Seed ortholog evalue | 2.6e-50 |
| Seed eggNOG ortholog | 2880.D7FGU4 |
| Preferred name | LAS1L |
| KEGG ko | ko:K05956,ko:K16912 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000460,GO:0000469,GO:0000470,GO:0000478,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006325,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022613,GO:0030684,GO:0030687,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0035097,GO:0042254,GO:0042273,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044665,GO:0046483,GO:0051276,GO:0070013,GO:0071339,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:1901360,GO:1902494,GO:1990234,GO:1990904 |
| EggNOG free text desc. | endonucleolytic cleavage involved in rRNA processing |
| EggNOG OGs | KOG2425@1,KOG2425@2759 |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-11_000410.3 |
| EC | 2.5.1.60 |
| COG Functional cat. | L |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01000,ko01006,ko03009,ko04131 |
| Exons | 9 |
| Model size | 2686 |
| Cds size | 2238 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2117.5543.1 >prot_H-paniculata_contig2117.5543.1 ID=prot_H-paniculata_contig2117.5543.1|Name=mRNA_H-paniculata_contig2117.5543.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=746bp
MVSPATSKRQDNEGETVHAAPVSSLAREIGLPTWLVDIRHEAAHKQLPGL VILRLAADFLMDYLWRRYWAPQEEHLRFLWGAFDQLICRYKAVSESDPAI PCTCIVSNDGSRARPNSSHSPPSIDDANRSSPSTSKKRCQGDSQHTLSSD SASTDFQLLASPAGVAAAAGAPSTTEAPSTPSQNSKYCSMPQPRPATQSA ESSMSQPTVSAPIARCGATSMGSTHKTGGGVERFAGAAETAAREIACSVT PTALSWAIVSLLADGSVSLGTGGVEDDDGIAGQGRRDQGHLLPRSKEKYP TPGTPGVDNDKLCNRLTTRWATLLDMFHGRWRGFGAALLVRLVETLLANA SRQATSIVNPAASVIGPDDGPSTRATRCRPPEGGTRNGTTIGWERQAVFI GLWVRHLLSRRWHLRSTEAKIKETLRNSAVEDGLTPDFCDRPEASWGYEE KAWADRTAPTEVLYLAAFPLNELSARCRSALSALITTRSTSIDNESSHSI EATISSRCAKPHGAHWALPGLEAVVRCMDSALGKNGTVAYTDRHRRHPTT SSDKKFVHTRGVAEVGPTAARDAELQVGVLETSARQIGALPHKKDKVMDE GSLTEGEAVSEEGSQGGDVEGACFGCVNRAEAGTVAMMDLDALEKILSGG GPTEVGSTALSAAASTISYEGTEAVGEVNRKGRSELPSVLMEGHDRVKAS TARESTVNVSGNHGNGNGGAWEMVENWTPCAIGTLPGWSGAYLYA* back to topmRNA from alignment at H-paniculata_contig2117:1621..8512- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2117.5543.1 ID=mRNA_H-paniculata_contig2117.5543.1|Name=mRNA_H-paniculata_contig2117.5543.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6892bp|location=Sequence derived from alignment at H-paniculata_contig2117:1621..8512- (Halopteris paniculata Hal_grac_a_UBK monoicous) CAGGCGTTGTTGTTTTCTCCAGAGCCGCATCTACGCTGCCAAGGTGTTCA
GCACGTAGCGGTATGGCGCAGTCGGGAGCGAATACCGCACGCTGTCGACA
CCACGTCGCAGGTGGAGAGATGGAGGGGTCTTTCATCCTGTGTTTTGCGT
CCACGCTATGCCGCCGCTGTTCTGCTGCAATGTCATATCATGCGGCATCC
AGTCAAGCGCTCTGACTACATACATGAGAAAATCAATATCTAGGCCAGCG
AATTTATGCGAGCAACACGATGTGCGCACAGGGTGTGTACAACGACTATA
TTTTGGTTGTACTCGAGGAAGCATACATGAACACCACCACATTACGGCTG
TGATTCTGATCGACAAAATCACTAAATACAATTTGTAGTCGACAGGAACC
GCACAAGCTCAGCTCGTGCCGCAGCGAAATCTGCATCTCCCAAGTGCCTC
ATACATGAAATTCGCTTGCCATGAACCTCTGCTCTGTCACAATATTAACG
GTTTCGCTTTCCTCCCGTTGCTACTGTTGTCACAAATCTGGCCGTAATAT
TCTCCGTCAAAACATGACGTGTGCCATGTTTCATGACAAAATCACGCCTC
CAACACCTCAAAGCTCGTGGAGGTGCGCCTTAACGATATTGGGCAAGGCG
GGTGGGGCGTGGCATGCCTCCGTCGTAGCGAGGAAGAGCTTCGGCTAGTG
TACAGCACCGTGGTCGTCAGAGCTGTCAATGGTCTCACCGGCCACGAGCA
AAAGGCAAGATAACGAAGGCGAAGTCGTGGTGGCGGTGGGCAGGTTCGGT
CGGGGAGGGTGGGTAGGCACCCTGTGTATGCTGTGAAACCACCAGAACAC
GAATGGTACATACCCGCGTGTGTCCTTTACAGCTGCCCGTCGACTACACG
TCGCCGGTCGGACTGGCGGGTGGATGCTCATATAACAGACCCAACCCCTC
TCTCCCCCCCCCCCCACCCTCAATCTTTGTTAGCTTGAATTGAATGAGAA
CACAACTGTCAATTGTTGTATCAACACCAGTATTCGATGCATACCACTCG
CTGGCCCTCACACCGAATACTAACGTTTTATTTTTATTTTTTATTCCCTG
TCTTCTGCTTGCGTTCTGCACCGTGCTCGTCGCGTATTTCAAATCGGTAC
TCGTCAACCAACTATAAAAACACGACAGACTGTGCACGCTGCTCCCGTAT
CCTCCTTGGCCCGTGAGATCGGCCTCCCCACCTGGCTGGTCGATATCCGA
CACGAGGCTGCCCACAAACAGGTGGGTAGTGGATAAGCTCTGTGTAGTTT
GTATCGGATATTTCGGTGAGTTCATGTTGACACTGATTGGACCCAACGGG
CAGCTAATTTTGTACTGCTGGCCGCACTTTGGTGTATTAGTGTTTGCTCA
CTATTTTTCGCTGGGCAACGCCGCGTGTGTTTGTGTGTGTTCCACGGAAA
GCGTTGGAAAAACATTACGCACACAAACACACGCGGCTCGTTGGTTCTTT
TGTCACTCGATTTTGTCAAATTTTCATTGTCACACAATCGTACCCATTCG
GCACGTGCCTTGGACTGCTTGTCGCTCTGCGATGGTCGGGCAAACGATAC
GGCATCGTAGAGCTACAACTGTAGGCTTCCGAGCGGAAGTGCAGCAAGAA
AAACTAAAACCAAATATGGAACTCCAAATGTACACGGGAGTACGACCCGA
CAAAGGCCAGTCCCCCACGTAGGCCCGTGTATACACACCCCCGTGTGTGA
CCGAATGGTGGCACTTCATTGTGCGCTGGCCCGGTACCGTGGCAACGCCC
CCGCTGAAAAACCGCCGCTCATGGCATGTCTGGATAACATGGACGATCCG
GCCTGTTAACTGTACCAGTTACCGGGTTTGGTGATTCTCCGACTAGCGGC
GGATTTCTTGATGGATTACCTATGGAGGAGGTACTGGGCACCTCAAGAGG
AGCACCTACGATTTTTATGGGGTGCGTTTGACCAACTCATCTGTAGGTGA
GCGCACGGGCTATATAGTACACCTTGTACAGTGTATCGAGCGCCTAGTAA
GCTAGTGTGGTTATACTTTCATGCTACGGTGATCGACTTTTATCTGGCAT
CGAGGTTCCCGATAACCAGCTTGAAGTGTCTCGAAGCCACGCGAGGTTTC
GCCAGGGGCTATCTTTGTTCTGAAACATACGCCATTCGTGTTGCTTAATC
ACTACTACTGAACCTTCTTCTGTACACACCCGCTTGATAATCTGTCCGCT
TGCCATCCCTCGCTCGTACGCTCCTTGTGCCAAAGATACAAGGCTGTGAG
CGAGTCAGACCCTGCCATACCTTGTACCTGCATAGTATCCAATGACGGGT
CGAGAGCCCGCCCCAATTCCTCTCACTCCCCGCCTTCAATCGACGACGCC
AATCGTTCTTCTCCCTCCACGAGCAAGAAACGATGTCAAGGCGATAGTCA
ACACACCCTATCCAGCGACTCGGCATCAACCGATTTTCAGTTGCTTGCAT
CTCCCGCCGGCGTTGCCGCTGCTGCCGGTGCTCCTTCGACTACCGAGGCA
CCATCCACACCGTCTCAAAATAGCAAGTATTGCAGCATGCCCCAGCCCCG
TCCTGCCACTCAGAGTGCCGAATCATCCATGAGCCAACCCACCGTATCTG
CGCCGATCGCTCGGTGTGGCGCAACCTCCATGGGCTCAACCCACAAAACC
GGTGGTGGCGTCGAAAGATTCGCCGGCGCCGCCGAGACCGCAGCACGCGA
GATAGCGTGTTCGGTTACGCCCACCGCACTATCGTGGGCCATCGTCTCTC
TTCTTGCAGACGGGAGCGTTTCGCTAGGGACCGGTGGAGTGGAAGATGAT
GACGGAATCGCAGGACAGGGAAGGAGAGACCAGGGGCATTTGCTTCCTCG
ATCAAAGGAAAAGTACCCGACGCCGGTGAGATCAATGGCGAGGGGGCGTG
GGATACATGGTCACCCGCCGCGGGGTGTTCTACCATTGGCTGTTGGTTAC
CTTTGTTTGGGTGGCTGTTGAACACGGTGTGCGTGGAGAAAGGGGCAACG
CAAAATAAAATGCCTGCAATTTCAGTTGTATTGCAAGCTATTTTACGAAT
TGTAGCCGACGGGAAGGGTTTCTGATATGGGATCTCGCCCCAGACCTGAC
ACATGTCTAATTATTGTGTGAGTATGATGCAAAGGATAGGATCAGCTGAT
AAATGCTTGTGTACTATTTCCCTCGCGCCGGAATGGCATATGGGTGTCAG
GTTAGCACTGCAACGCCATACGTACTGTACAGTGATCCAAGTCTATTCGG
TGGCCGTTTCGTTGTTCTTTCTCAGCTGCCACGTATCTAGCATGTCCTCT
CAACCAATACATGGGGTGGTGACTTCCGCGTAGCGTTCTGTTTCACACAG
TTTCACTTGGGTGTCTGCTGTGGCAACGTAGTACCTGGAAGGCTCGGTCA
CCACCGAAAACTCGTTGACCAGAGCAGTGCCCATACGTTTGTCGTGGTAC
ATCCTTGTCTGCGATAAATTGAGATAAGGATAGACCCAACATATCTCGGC
TCCCGCCTTGCCCTGTCCCATGGTTGCACCCCTGCAGGGTACCCCTGGAG
TGGACAATGATAAATTGTGTAACAGGTTGACTACCAGGTGAGAAAGATAG
GCTCACCGATATAACACATGGTGTCCCGTAACTAGAGTTGGAGAAGTGAA
AGTGTGTACCACCGAAGCCGACAGGAAGTTAAGGCGTATTTCACATGGTT
GCTTAACCCCTTGAAAACTTCAGATCCCCTAATCAGCTGCAGAGCTCTTG
TTTATTATTTGGTGACGACAAAGTCGTGTGTGGAAGTTCTCTCTTCACAC
TAAATAGGAGATAAAAAAATCCCCTAACAGCAGAAACACGATCCTGTTTT
GCATCTAAAATGCTCTAACCTACTGCCTAGAGGTGGTCAGGTTCTTTCGA
TTTCATCGTCAGTATTCACGACCCGTCGATAACAAACAAATATTGTGGCC
GTGATGAAGTCCAGTCCCCGAAGGGTTGAAGCTATGGTCTCGTCATTCGC
CGACGTGCTGTTGCGTGCATTTGTGCCCCGGTTACCCGCGCTGTACATCG
AGTCCTTGATCAGAAGCCTTCGAGTAATTCCGTCGTCAGAGAAGTTCTTT
TGAACTTTTCGTGGCTGCTGCTGGTATTGCCCTGTCGAGGAAAATGTTAT
CGCGAGAGACGCGGTTGAAACCAGCTGTTTCACTTGGTGTGTTTTGGCGA
TGTACGTCTACACGGCATCATTTTGCGGATTTATTCGCCTCCATTCTCAC
CCCGGAGGGTGGATCAACTCGGTGCATATGGTTGCTCTGTTCCTCTTTCG
CCCACGTTTCTTTACCAACGCACAGATGGGCAACACTGCTAGACATGTTT
CACGGCAGATGGCGAGGTTTTGGAGCCGCCTTGCTTGTACGTCTCGTCGA
GACACTTCTCGCGAACGCGTCGCGACAGGCCACCTCCATCGTAAACCCTG
CAGCCAGCGTCATCGGACCCGACGACGGACCCAGCACAAGGGCAACTCGC
TGTAGGCCCCCAGAAGGCGGCACTAGGAATGGCACTACAATTGGGTGGGA
GCGGCAGGCCGTGTTCATAGGGCTATGGGTACGGCACCTTTTAAGCCGTC
GGTGGCACCTGCGAAGTACGGAGGTGAGCTTGCATATTGTTGAGCCACGC
AGACGGGTATTCAAGGTTGGGAATTGAACGTGGTTTGCCTTGGATACGAT
ATTCGATTGCACGGATATTTATTTGGAGATATTCGGACACTTAGACATGA
TAATATGTCGTTCGACACGAAGGTAGAAAACGCTCACATCCCAGATTTTT
CCAACTTTTATTTCAATACGATACGATGTCCAACTGTGCGGTACTGGAGA
ATGAGTGCCGGGACGCACGGGAAATAGAGGGGTCCCGGGGATCATTTTCT
GCGGAACCACTGCCAGGCCATGCTTCGCAGGTTGTATTCCGGGTACCAGG
GACAACGTGGGTCAGATCAAGCTGTCGAGAGCTGGGGTGCCACAGTGAAG
ATGCGTAGGTTTAGATAGGGTGCGTTCTCGTGGACTGTTGCTCAGCTTAC
GATATGCGTTGCTCCAGCCCGTTGATCTGTTTGAACATTTTCCAATTATG
TACGCCGAGGTCAATCGATCATCTAGCTGAGAGTTTTCGGGGCAGAACAG
TGAACCGAATGAAGGCCCAATTCCCCATGGCCTTACAGCGCACTCATCGT
AATCCTGTCATTTCTTCGGTCAGGCGAAAATCAAGGAAACCTTGCGCAAT
AGTGCTGTGGAGGATGGCCTTACGCCTGACTTCTGCGATCGACCGGAGGC
GTCTTGGGGATACGAAGAGAAAGCATGGGCAGATCGCACAGGTAAATTAC
GTACGCCTCTATCCAGGACTTGGAAAAAAAAGTGCGCAATATCGGCTTGA
AGTATTAAAAGAGAGCGCCGGCGTTGATTTATTTGCTGTTGGTTCTACAT
TCGCGTATGTCGAACTACCTCAACCGAGCTGTATCAGGAGATATTGGAAC
CCTCGTACTTGACATACCAACTTGGCTTGTTGGTGCTCGAAGCTGGTCTC
GTAAGCTGGCTTCGTGCATGGCACCGATGGACGGGTCGAATGTAGCGTTT
TCAAGTACCAGATATCACGTTGCGGTTACATAGATGCTTACATCAAACAG
CCACGGCTTTCTCGGCCGTGTTCGTCAACGGAATGGCAGTGATCACTTTG
AGATGCGAGTGTAACCGGTGTTTGCTCTCCGTCCCATGTACGTCTTTCTT
ACAGCCCCTACGGAGGTGCTCTACCTCGCTGCGTTTCCATTGAACGAACT
GTCAGCAAGATGTAGGTCGGCCCTCTCTGCCTTAATAACAACACGAAGCA
CAAGCATAGACAACGAAAGTAGTCATTCGATTGAGGCTACGATCAGCAGT
CGGTGCGCAAAGCCACACGGCGCCCACTGGGCGTTACCCGGGCTCGAGGC
GGTGGTTCGATGTATGGATTCTGCCCTCGGTAAAAACGGCACCGTCGCCT
ACACTGACAGACACCGACGTCACCCTACCACGTCATCAGACAAGAAATTC
GTTCATACGCGTGGCGTCGCAGAAGTTGGGCCCACAGCGGCTCGCGATGC
GGAATTACAGGTTGGAGTGTTGGAAACTAGCGCTCGCCAGATTGGCGCAT
TGCCGCACAAGAAAGATAAAGTTATGGATGAGGGCAGCTTGACTGAGGGG
GAAGCGGTCTCGGAAGAGGGTAGTCAAGGCGGCGATGTGGAGGGTGCATG
TTTTGGTTGCGTGAATCGAGCAGAAGCCGGAACGGTGGCGATGATGGATC
TTGATGCGCTCGAGAAAATTCTGAGTGGGGGAGGGCCCACCGAAGTAGGT
TCTACTGCGCTTTCCGCAGCTGCCTCGACTATCTCTTATGAGGGCACAGA
GGCAGTGGGGGAAGTAAATAGGAAGGGGCGTTCGGAGTTGCCCAGCGTTC
TGATGGAGGGACATGATCGGGTCAAAGCTTCTACCGCAAGAGAGTCGACT
GTAAATGTTTCTGGAAATCATGGGAACGGGAACGGCGGGGCCTGGGAGAT
GGTGGAGAATTGGACACCTTGCGCGATTGGCACGTTGCCGGGATGGTCTG
GAGCGTACTTGTACGCTTGAACTCAGATTTTTGTATTTCGCAGGAGTTGT
AGATGTCCTTTTCAGGCTTTTAATACACAGAAGGCGAGTGAATTCATTTC
CAATTTCTACACGAGCATATTGGCCGTTTCTTCAGTGACCACTCGTATCG
ACCGCGCTGAATAATCGCTCGTTTGCGGGGACCTTGATATTGTTTCGGGT
AGACCGGTACGAACGATCCTGCCTGGAGCTGTTTCTCTTGGC back to topCoding sequence (CDS) from alignment at H-paniculata_contig2117:1621..8512- >mRNA_H-paniculata_contig2117.5543.1 ID=mRNA_H-paniculata_contig2117.5543.1|Name=mRNA_H-paniculata_contig2117.5543.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4476bp|location=Sequence derived from alignment at H-paniculata_contig2117:1621..8512- (Halopteris paniculata Hal_grac_a_UBK monoicous) ATGGTCTCACCGGCCACGAGCAAAAGGCAAGATAACGAAGGCGAAATGGT CTCACCGGCCACGAGCAAAAGGCAAGATAACGAAGGCGAAACTGTGCACG CTGCTCCCGTATCCTCCTTGGCCCGTGAGATCGGCCTCCCCACCTGGCTG GTCGATATCCGACACGAGGCTGCCCACAAACAGACTGTGCACGCTGCTCC CGTATCCTCCTTGGCCCGTGAGATCGGCCTCCCCACCTGGCTGGTCGATA TCCGACACGAGGCTGCCCACAAACAGTTACCGGGTTTGGTGATTCTCCGA CTAGCGGCGGATTTCTTGATGGATTACCTATGGAGGAGGTACTGGGCACC TCAAGAGGAGCACCTACGATTTTTATGGGGTGCGTTTGACCAACTCATCT GTAGTTACCGGGTTTGGTGATTCTCCGACTAGCGGCGGATTTCTTGATGG ATTACCTATGGAGGAGGTACTGGGCACCTCAAGAGGAGCACCTACGATTT TTATGGGGTGCGTTTGACCAACTCATCTGTAGATACAAGGCTGTGAGCGA GTCAGACCCTGCCATACCTTGTACCTGCATAGTATCCAATGACGGGTCGA GAGCCCGCCCCAATTCCTCTCACTCCCCGCCTTCAATCGACGACGCCAAT CGTTCTTCTCCCTCCACGAGCAAGAAACGATGTCAAGGCGATAGTCAACA CACCCTATCCAGCGACTCGGCATCAACCGATTTTCAGTTGCTTGCATCTC CCGCCGGCGTTGCCGCTGCTGCCGGTGCTCCTTCGACTACCGAGGCACCA TCCACACCGTCTCAAAATAGCAAGTATTGCAGCATGCCCCAGCCCCGTCC TGCCACTCAGAGTGCCGAATCATCCATGAGCCAACCCACCGTATCTGCGC CGATCGCTCGGTGTGGCGCAACCTCCATGGGCTCAACCCACAAAACCGGT GGTGGCGTCGAAAGATTCGCCGGCGCCGCCGAGACCGCAGCACGCGAGAT AGCGTGTTCGGTTACGCCCACCGCACTATCGTGGGCCATCGTCTCTCTTC TTGCAGACGGGAGCGTTTCGCTAGGGACCGGTGGAGTGGAAGATGATGAC GGAATCGCAGGACAGGGAAGGAGAGACCAGGGGCATTTGCTTCCTCGATC AAAGGAAAAGTACCCGACGCCGATACAAGGCTGTGAGCGAGTCAGACCCT GCCATACCTTGTACCTGCATAGTATCCAATGACGGGTCGAGAGCCCGCCC CAATTCCTCTCACTCCCCGCCTTCAATCGACGACGCCAATCGTTCTTCTC CCTCCACGAGCAAGAAACGATGTCAAGGCGATAGTCAACACACCCTATCC AGCGACTCGGCATCAACCGATTTTCAGTTGCTTGCATCTCCCGCCGGCGT TGCCGCTGCTGCCGGTGCTCCTTCGACTACCGAGGCACCATCCACACCGT CTCAAAATAGCAAGTATTGCAGCATGCCCCAGCCCCGTCCTGCCACTCAG AGTGCCGAATCATCCATGAGCCAACCCACCGTATCTGCGCCGATCGCTCG GTGTGGCGCAACCTCCATGGGCTCAACCCACAAAACCGGTGGTGGCGTCG AAAGATTCGCCGGCGCCGCCGAGACCGCAGCACGCGAGATAGCGTGTTCG GTTACGCCCACCGCACTATCGTGGGCCATCGTCTCTCTTCTTGCAGACGG GAGCGTTTCGCTAGGGACCGGTGGAGTGGAAGATGATGACGGAATCGCAG GACAGGGAAGGAGAGACCAGGGGCATTTGCTTCCTCGATCAAAGGAAAAG TACCCGACGCCGGGTACCCCTGGAGTGGACAATGATAAATTGTGTAACAG GTTGACTACCAGGGTACCCCTGGAGTGGACAATGATAAATTGTGTAACAG GTTGACTACCAGATGGGCAACACTGCTAGACATGTTTCACGGCAGATGGC GAGGTTTTGGAGCCGCCTTGCTTGTACGTCTCGTCGAGACACTTCTCGCG AACGCGTCGCGACAGGCCACCTCCATCGTAAACCCTGCAGCCAGCGTCAT CGGACCCGACGACGGACCCAGCACAAGGGCAACTCGCTGTAGGCCCCCAG AAGGCGGCACTAGGAATGGCACTACAATTGGGTGGGAGCGGCAGGCCGTG TTCATAGGGCTATGGGTACGGCACCTTTTAAGCCGTCGGTGGCACCTGCG AAGTACGGAGATGGGCAACACTGCTAGACATGTTTCACGGCAGATGGCGA GGTTTTGGAGCCGCCTTGCTTGTACGTCTCGTCGAGACACTTCTCGCGAA CGCGTCGCGACAGGCCACCTCCATCGTAAACCCTGCAGCCAGCGTCATCG GACCCGACGACGGACCCAGCACAAGGGCAACTCGCTGTAGGCCCCCAGAA GGCGGCACTAGGAATGGCACTACAATTGGGTGGGAGCGGCAGGCCGTGTT CATAGGGCTATGGGTACGGCACCTTTTAAGCCGTCGGTGGCACCTGCGAA GTACGGAGGCGAAAATCAAGGAAACCTTGCGCAATAGTGCTGTGGAGGAT GGCCTTACGCCTGACTTCTGCGATCGACCGGAGGCGTCTTGGGGATACGA AGAGAAAGCATGGGCAGATCGCACAGGCGAAAATCAAGGAAACCTTGCGC AATAGTGCTGTGGAGGATGGCCTTACGCCTGACTTCTGCGATCGACCGGA GGCGTCTTGGGGATACGAAGAGAAAGCATGGGCAGATCGCACAGCCCCTA CGGAGGTGCTCTACCTCGCTGCGTTTCCATTGAACGAACTGTCAGCAAGA TGTAGGTCGGCCCTCTCTGCCTTAATAACAACACGAAGCACAAGCATAGA CAACGAAAGTAGTCATTCGATTGAGGCTACGATCAGCAGTCGGTGCGCAA AGCCACACGGCGCCCACTGGGCGTTACCCGGGCTCGAGGCGGTGGTTCGA TGTATGGATTCTGCCCTCGGTAAAAACGGCACCGTCGCCTACACTGACAG ACACCGACGTCACCCTACCACGTCATCAGACAAGAAATTCGTTCATACGC GTGGCGTCGCAGAAGTTGGGCCCACAGCGGCTCGCGATGCGGAATTACAG GTTGGAGTGTTGGAAACTAGCGCTCGCCAGATTGGCGCATTGCCGCACAA GAAAGATAAAGTTATGGATGAGGGCAGCTTGACTGAGGGGGAAGCGGTCT CGGAAGAGGGTAGTCAAGGCGGCGATGTGGAGGGTGCATGTTTTGGTTGC GTGAATCGAGCAGAAGCCGGAACGGTGGCGATGATGGATCTTGATGCGCT CGAGAAAATTCTGAGTGGGGGAGGGCCCACCGAAGTAGGTTCTACTGCGC TTTCCGCAGCTGCCTCGACTATCTCTTATGAGGGCACAGAGGCAGTGGGG GAAGTAAATAGGAAGGGGCGTTCGGAGTTGCCCAGCGTTCTGATGGAGGG ACATGATCGGGTCAAAGCTTCTACCGCAAGAGAGTCGACTGTAAATGTTT CTGGAAATCATGGGAACGGGAACGGCGGGGCCTGGGAGATGGTGGAGAAT TGGACACCTTGCGCGATTGGCACGTTGCCGGGATGGTCTGGAGCGTACTT GTACGCTTGACCCCTACGGAGGTGCTCTACCTCGCTGCGTTTCCATTGAA CGAACTGTCAGCAAGATGTAGGTCGGCCCTCTCTGCCTTAATAACAACAC GAAGCACAAGCATAGACAACGAAAGTAGTCATTCGATTGAGGCTACGATC AGCAGTCGGTGCGCAAAGCCACACGGCGCCCACTGGGCGTTACCCGGGCT CGAGGCGGTGGTTCGATGTATGGATTCTGCCCTCGGTAAAAACGGCACCG TCGCCTACACTGACAGACACCGACGTCACCCTACCACGTCATCAGACAAG AAATTCGTTCATACGCGTGGCGTCGCAGAAGTTGGGCCCACAGCGGCTCG CGATGCGGAATTACAGGTTGGAGTGTTGGAAACTAGCGCTCGCCAGATTG GCGCATTGCCGCACAAGAAAGATAAAGTTATGGATGAGGGCAGCTTGACT GAGGGGGAAGCGGTCTCGGAAGAGGGTAGTCAAGGCGGCGATGTGGAGGG TGCATGTTTTGGTTGCGTGAATCGAGCAGAAGCCGGAACGGTGGCGATGA TGGATCTTGATGCGCTCGAGAAAATTCTGAGTGGGGGAGGGCCCACCGAA GTAGGTTCTACTGCGCTTTCCGCAGCTGCCTCGACTATCTCTTATGAGGG CACAGAGGCAGTGGGGGAAGTAAATAGGAAGGGGCGTTCGGAGTTGCCCA GCGTTCTGATGGAGGGACATGATCGGGTCAAAGCTTCTACCGCAAGAGAG TCGACTGTAAATGTTTCTGGAAATCATGGGAACGGGAACGGCGGGGCCTG GGAGATGGTGGAGAATTGGACACCTTGCGCGATTGGCACGTTGCCGGGAT GGTCTGGAGCGTACTTGTACGCTTGA back to top
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