mRNA_H-paniculata_contig2115.5533.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2115.5533.1 vs. uniprot
Match: A0A6H5KV36_9PHAE (Aminotran_1_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV36_9PHAE) HSP 1 Score: 227 bits (578), Expect = 9.980e-69 Identity = 120/152 (78.95%), Postives = 135/152 (88.82%), Query Frame = 1
Query: 25 RYCYRLILNEALSFGVLGATGRGLTEMHGVDVNEVEVLTLSMAHSLASVGGLCIGTTQVVDHQRLSAAGYCYSASAPPFVSAAASSALRMLRAEPGLVSALRTNSELLHRGISAIPGLEVTSCDLSPIVHVRLA-ELDAVDVREMLERIAKR 477
+YCYRLILNEALSFGVLGATGRG+TEM+GVDV+EVE++ LSMAHSLASVGGLCIGTTQVV HQRLSAAGYCYSA+APPF SAAAS+AL MLRAEP LV+ALRTN+E LH + AIPGL+VTSC LSPIVHV LA E +A VR +L+ IAKR
Sbjct: 370 KYCYRLILNEALSFGVLGATGRGVTEMYGVDVSEVEIVALSMAHSLASVGGLCIGTTQVVAHQRLSAAGYCYSAAAPPFTSAAASAALGMLRAEPNLVAALRTNAEFLHGAVGAIPGLKVTSCALSPIVHVALAGEQEAAAVRLVLQGIAKR 521
BLAST of mRNA_H-paniculata_contig2115.5533.1 vs. uniprot
Match: A0A835Z5A0_9STRA (Pyridoxal phosphate-dependent transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5A0_9STRA) HSP 1 Score: 157 bits (397), Expect = 1.280e-42 Identity = 79/148 (53.38%), Postives = 115/148 (77.70%), Query Frame = 1
Query: 25 RYCYRLILNEALSFGVLGATGRGLTEMHGVDVNEVEVLTLSMAHSLASVGGLCIGTTQVVDHQRLSAAGYCYSASAPPFVSAAASSALRMLRAE-PGLVSALRTNSELLHRGISAIPGLEVTSCDLSPIVHVRLAELDAVDVREMLER 465
+Y YRL+++E LSFGVLGA+GRG+TE +G+ V V+++T+S+AH+LAS+GG+C+G VVDHQRLS AGYC+SA+APPF +AAA ++R+L +E P L+ LRTN++ L G++ + GL+V S + SPIVHV LA A + +E L++
Sbjct: 312 KYHYRLVVDEGLSFGVLGASGRGVTEHYGLPVTCVDIMTVSLAHALASIGGVCVGRDDVVDHQRLSGAGYCFSAAAPPFTAAAAGESIRLLESEGPQLLQQLRTNAKRLSSGLARVNGLQVISSEESPIVHVALAGAGASNQQEHLQQ 459
BLAST of mRNA_H-paniculata_contig2115.5533.1 vs. uniprot
Match: A0A7S2UXR4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXR4_9STRA) HSP 1 Score: 149 bits (376), Expect = 2.300e-42 Identity = 71/151 (47.02%), Postives = 107/151 (70.86%), Query Frame = 1
Query: 25 RYCYRLILNEALSFGVLGATGRGLTEMHGVDVNEVEVLTLSMAHSLASVGGLCIGTTQVVDHQRLSAAGYCYSASAPPFVSAAASSALRMLRAEPGLVSALRTNSELLHRGISAIPGLEVTSCDLSPIVHVRLAELDAVDVREMLERIAKR 477
+Y YRL+++E+ SFG LG TGRG+TE GVD++ VE++ LSM +LASVGG C+G+ Q++DHQRLS GYC+SASAPPF+S AA + L+++ P L+ +L +E LH+ +S+ GL+V S SP++H+R+ + D E+ I ++
Sbjct: 14 KYFYRLVVDESFSFGTLGGTGRGVTEHCGVDISMVEIIMLSMESTLASVGGTCVGSEQIIDHQRLSGVGYCFSASAPPFLSVAACTGLQVMEENPNLLVSLNQKAEYLHKALSSCKGLQVVSQKGSPLLHMRITDPTCCDKLEVYAEIVEK 164
BLAST of mRNA_H-paniculata_contig2115.5533.1 vs. uniprot
Match: A0A4D9CT10_9STRA (Aminotran_1_2 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CT10_9STRA) HSP 1 Score: 153 bits (386), Expect = 5.410e-41 Identity = 75/135 (55.56%), Postives = 103/135 (76.30%), Query Frame = 1
Query: 25 RYCYRLILNEALSFGVLGATGRGLTEMHGVDVNEVEVLTLSMAHSLASVGGLCIGTTQVVDHQRLSAAGYCYSASAPPFVSAAASSALRMLRAEPGLVSALRTNSELLHRGISAIPGLEVTSCDLSPIVHVRLAE 429
+Y YRL L++ SFG G GRGL E GV + ++EV+++S++H+L SVGG+C+GT++VVDHQRLS AGYCYSASAPPF S+AA +AL +L EP LV+ LR N+ L R + IPGL+V S ++SP++HV +AE
Sbjct: 305 QYRYRLYLDQTFSFGCFGTAGRGLAEHFGVPLADIEVMSVSISHALGSVGGMCVGTSEVVDHQRLSGAGYCYSASAPPFTSSAAMAALALLEKEPELVTKLRENAVWLARALGKIPGLKVRSQEISPVLHVGVAE 439
BLAST of mRNA_H-paniculata_contig2115.5533.1 vs. uniprot
Match: T1NF66_TRIUA (Aminotran_1_2 domain-containing protein n=1 Tax=Triticum urartu TaxID=4572 RepID=T1NF66_TRIUA) HSP 1 Score: 139 bits (351), Expect = 7.220e-38 Identity = 73/152 (48.03%), Postives = 113/152 (74.34%), Query Frame = 1
Query: 25 RYCYRLILNEALSFGVLGATGRGLTEMHGVDVNEVEVLTLSMAHSLASVGGLCIGTTQVVDHQRLSAAGYCYSASAPPFVSAAASSALRMLRAEPGLVSALRTNSELLHRGISAIPGLEVTSCDLSPIVHVRLAELD---AVDVREMLERIA 471
+Y +R+IL E+ SFGVLG +GRGL E +GV +++++++T +M ++LAS GG C G+ +VVDHQRLS+AGY +SAS PP++++AA SA+ L P +++ LR+N LLH+G+S PGL+++S LSPIV ++L + A D+ ++LE IA
Sbjct: 76 KYRFRVILEESHSFGVLGKSGRGLAEHYGVPIDKIDIITAAMGNALASDGGFCTGSARVVDHQRLSSAGYVFSASLPPYLASAAISAVNYLEENPSVLTKLRSNVALLHKGLSGTPGLQISSHVLSPIVFLKLNKSTGSLATDL-DLLETIA 226
BLAST of mRNA_H-paniculata_contig2115.5533.1 vs. uniprot
Match: B8BKC3_ORYSI (Aminotran_1_2 domain-containing protein n=1 Tax=Oryza sativa subsp. indica TaxID=39946 RepID=B8BKC3_ORYSI) HSP 1 Score: 137 bits (346), Expect = 9.320e-38 Identity = 74/153 (48.37%), Postives = 110/153 (71.90%), Query Frame = 1
Query: 25 RYCYRLILNEALSFGVLGATGRGLTEMHGVDVNEVEVLTLSMAHSLASVGGLCIGTTQVVDHQRLSAAGYCYSASAPPFVSAAASSALRMLRAEPGLVSALRTNSELLHRGISAIPGLEVTSCDLSPIVHVRLAEL--DAVDVREMLERIAKR 477
+Y +R+IL E+ SFGVLG +GRGL E +GV V +++++T M ++LA+ GG C G+ +VVDHQRLS++GY +SAS PP++++AA SA+ L P +++ LR+N LLH+ +S IPGLE+ S LSPIV ++L AV E+LE IA++
Sbjct: 19 KYRFRVILEESHSFGVLGKSGRGLAEHYGVPVEKIDIITAGMGNALATDGGFCTGSVRVVDHQRLSSSGYVFSASLPPYLASAAMSAVNHLEENPSVLANLRSNIALLHKELSDIPGLEIASNILSPIVFLKLKTPTGSAVADLELLEIIAEK 171
BLAST of mRNA_H-paniculata_contig2115.5533.1 vs. uniprot
Match: A0A024UG65_9STRA (Aminotran_1_2 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UG65_9STRA) HSP 1 Score: 144 bits (362), Expect = 1.520e-37 Identity = 71/151 (47.02%), Postives = 110/151 (72.85%), Query Frame = 1
Query: 25 RYCYRLILNEALSFGVLGATGRGLTEMHGVDVNEVEVLTLSMAHSLASVGGLCIGTTQVVDHQRLSAAGYCYSASAPPFVSAAASSALRMLRAEPGLVSALRTNSELLHRGISAIPGLEVTSCDLSPIVHVRLAELDAVDVREMLERIAKR 477
++C+RL L+E SFGVLGATG+G+TE + V++V++L +++ +LA VGG G+ VVD+QR+++AGY +SASAPP+ SA AS ++R+L++EPGL+ +LR + HR +SAIPGL V S +SP+VHVR+A + +E ++ +R
Sbjct: 304 KHCFRLFLDETYSFGVLGATGKGITEHFNMSVDDVDILCGALSTTLAGVGGFSTGSQLVVDYQRINSAGYVFSASAPPYTSAVASESIRILKSEPGLLKSLRERAVQAHRLLSAIPGLHVLSDPISPVVHVRVATENGTTNKEWTAQVCRR 454
BLAST of mRNA_H-paniculata_contig2115.5533.1 vs. uniprot
Match: A0A453II14_AEGTS (Aminotran_1_2 domain-containing protein n=3 Tax=Triticinae TaxID=1648030 RepID=A0A453II14_AEGTS) HSP 1 Score: 139 bits (349), Expect = 1.700e-37 Identity = 73/154 (47.40%), Postives = 113/154 (73.38%), Query Frame = 1
Query: 25 RYCYRLILNEALSFGVLGATGRGLTEMHGVDVNEVEVLTLSMAHSLASVGGLCIGTTQVVDHQRLSAAGYCYSASAPPFVSAAASSALRMLRAEPGLVSALRTNSELLHRGISAIPGLEVTSCDLSPIVHVRLAELD---AVDVREMLERIAKR 477
+Y +R+IL E+ SFGVLG +GRGL E +GV +++++++T M ++LA+ GG C G+ +VVDHQRLS+AGY +SAS PP++++AA SA+ L P +++ LR+N LLH G+S PGLE++S LSPIV ++L + A D+ ++LE IA++
Sbjct: 79 KYLFRVILEESHSFGVLGKSGRGLAEHYGVPIDKIDIITAGMGNALATDGGFCTGSARVVDHQRLSSAGYVFSASLPPYLASAAVSAVNYLEENPSVLANLRSNVALLHTGLSDTPGLEISSHVLSPIVFLKLKKSTGSLATDL-DLLETIAEQ 231
BLAST of mRNA_H-paniculata_contig2115.5533.1 vs. uniprot
Match: UPI00188EC1E6 (long chain base biosynthesis protein 1a-like n=2 Tax=Triticum dicoccoides TaxID=85692 RepID=UPI00188EC1E6) HSP 1 Score: 139 bits (351), Expect = 6.700e-37 Identity = 73/152 (48.03%), Postives = 113/152 (74.34%), Query Frame = 1
Query: 25 RYCYRLILNEALSFGVLGATGRGLTEMHGVDVNEVEVLTLSMAHSLASVGGLCIGTTQVVDHQRLSAAGYCYSASAPPFVSAAASSALRMLRAEPGLVSALRTNSELLHRGISAIPGLEVTSCDLSPIVHVRLAELD---AVDVREMLERIA 471
+Y +R+IL E+ SFGVLG +GRGL E +GV +++++++T +M ++LAS GG C G+ +VVDHQRLS+AGY +SAS PP++++AA SA+ L P +++ LR+N LLH+G+S PGL+++S LSPIV ++L + A D+ ++LE IA
Sbjct: 175 KYRFRVILEESHSFGVLGKSGRGLAEHYGVPIDKIDIITAAMGNALASDGGFCTGSARVVDHQRLSSAGYVFSASLPPYLASAAISAVNYLEENPSVLTKLRSNVALLHKGLSGTPGLQISSHVLSPIVFLKLNKSTGSLATDL-DLLETIA 325
BLAST of mRNA_H-paniculata_contig2115.5533.1 vs. uniprot
Match: A0A3R6VEN7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6VEN7_9STRA) HSP 1 Score: 144 bits (362), Expect = 8.880e-37 Identity = 71/151 (47.02%), Postives = 110/151 (72.85%), Query Frame = 1
Query: 25 RYCYRLILNEALSFGVLGATGRGLTEMHGVDVNEVEVLTLSMAHSLASVGGLCIGTTQVVDHQRLSAAGYCYSASAPPFVSAAASSALRMLRAEPGLVSALRTNSELLHRGISAIPGLEVTSCDLSPIVHVRLAELDAVDVREMLERIAKR 477
++C+RL L+E SFGVLGATG+G+TE + V++V++L +++ +LA VGG G+ VVD+QR+++AGY +SASAPP+ SA AS ++R+L++EPGL+ +LR + HR +SAIPGL V S +SP+VHVR+A + +E ++ +R
Sbjct: 285 KHCFRLFLDETYSFGVLGATGKGITEHFNMSVDDVDILCGALSTTLAGVGGFSTGSQLVVDYQRINSAGYVFSASAPPYTSAVASESIRILKSEPGLLKSLRERAVQAHRLLSAIPGLHVLSDPISPVVHVRVATENGTTNKEWTAQVCRR 435 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2115.5533.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2115.5533.1 >prot_H-paniculata_contig2115.5533.1 ID=prot_H-paniculata_contig2115.5533.1|Name=mRNA_H-paniculata_contig2115.5533.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=158bp MNLENGRYCYRLILNEALSFGVLGATGRGLTEMHGVDVNEVEVLTLSMAHback to top mRNA from alignment at H-paniculata_contig2115:20314..22408- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2115.5533.1 ID=mRNA_H-paniculata_contig2115.5533.1|Name=mRNA_H-paniculata_contig2115.5533.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2095bp|location=Sequence derived from alignment at H-paniculata_contig2115:20314..22408- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2115:20314..22408- >mRNA_H-paniculata_contig2115.5533.1 ID=mRNA_H-paniculata_contig2115.5533.1|Name=mRNA_H-paniculata_contig2115.5533.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=948bp|location=Sequence derived from alignment at H-paniculata_contig2115:20314..22408- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |