mRNA_H-paniculata_contig211.5512.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig211.5512.1 vs. uniprot
Match: D7FSX8_ECTSI (Ubiquitin carboxyl-terminal hydrolase 64E n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSX8_ECTSI) HSP 1 Score: 1290 bits (3337), Expect = 0.000e+0 Identity = 898/1873 (47.94%), Postives = 1108/1873 (59.16%), Query Frame = 3
Query: 297 MAHFGAFKNMFEEIGDKPGGGFAKVEDEVLGRAESGFVGLDNQGATCYLNALLQAMYMTPELRHGLYSINPKDIGEEAYEKDAQKDKDDEKAKLAKARAKIRKQEAEGRVQPDPEIVKQLLTM-FSVQAAHRAALKTDNKGFDAALDWALAHSEDPDFNAPLEGDDDEEAGEDGDAGDVTAEKKDKRRDKKK---SKDKSAKFIPLELQRLFSRLQLLDTRTDSTDRLTTKGFKWQDDQGRVQHDAHELNRLLIDRLEYDLRKSKINSGLVSALYEGVLVNQVKCLACEHVSERKETFRDVLLQVAGQEDLVTSLLSYTRPERLSGDNKYFCDQCQNKQDALRSQTLRALPPVLIFSLNRFEFDFETLERVKVQTAFKYPVALDMEPFVEGRAWAGNDNSDESQVPDLAGDPDTPGTCRSRQKWVPQAWKDAEAHAQAVYERSLSRDERAAASSLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTREEGGLVYDLLAVVVHRGSAYSGHYHAFIKDSLQEGRWMPPSGFELSEVEAAATAALAQEEEKAALG---------NKKNNSGNYKPGKGXXXXXXXXXXXXXDESAKGENGGRDPKDPKTLLVDILRNKPNHEALQLPCMKLPALRSEIRKRLGFK-WDKVFGSMHGRLEHFLERHGETFLLQAEAPGGSMEVLLM-------GDDAEPEGGGAGGGDRGKSGVEAGEGDDDEMQQALRLSLEQSMNGTXXXXXXXXXXXXDV---GGTILKSG---GTVVSKGTVDALAAEKHGRWFSFDDRKVTPISILDLQKPFSGAETAYLLVYRARSLDHESSSPCSSATSCLGAPTCASTLSXXXXXXXXXXXXXXXXXXXVVTGKSGALALPGNLHMTSEPPEFWVSKVASENMSLRSAKTTREADVHALTLKVWLPRLLTPQRPHLLPLEPGCAELEQLPEGLRGPLILNMDDRQTVSDLKKMAVERVGKNFKQMGCPDGVGRVRLSELTSHGPGMFLSKHLPDA----VTRPRHKGAGXXXXXXXXXXXXXXXXPPVSAV---LGDLEWDNMRDQEATVLMWDGYDVGGVELDEPTHENRPIRLTVAVLKPTEEEEATAWIDAILEQGGAARPGPERRGARAERCAYWQDVYVRAGVTAQELMRIVSNRGGGGVSVAKMCISLLR-------PAVSGSGEGXXXXXXXXXXXXXXXGGVTLEAVQIAGPEGVFQEWKVNDFVQKTGGGMDVS-LELQEGCELLVEEQGAASKLIRV-DAASLADMEAARRNRLVQLEVEVDDSVIESVKNAKLALAHDHAVEHHAGRPVTIYLEADGESATIPHVKARCLLNLAPGLI--SLPTSALNIPFPTSTPAPTGTNSAASAGLAGQLALASMVSSVRLTGNDSGTYGSVLEESAGSGDGMSLHAAEVRSGSSFMLEWGAPLPSGKTRVKFQLVTGNNPANMYDATRPGAVLCTLSVEADLKEPVSALKARMLEAAREAGIMVDGQERRIRLGNLIGDSSTLVEEQKDAEPYPKASLPQSSGKLTKSAAEDAGGKRDEKEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGYDAGASNLDGKGEEEGEGGEREAPGXXXXXXXXXXXXXXXXXXXXXXAAGRVAEDEVGEEGRAGLDVAAGGEVGETAAVKGRGEREEEKEFALCDKLVEESGILTAEEIHLEEGRVPRPRELEIVVQAYAPHFVGLAAAAANEKLDKKCAARAIAKVKSSANANSRSSSPGGATEEALVSADDDAR-----------------LDWRLGAKVGLRGRGERRRGGSGCVPTGLSPDTVWPDEEAEKKRQELEREKGHP 5729
MAH GAFKNMFEEI D G + ++E LGRAESGFVGLDNQGATCYLNALLQA+YMTPELRHGLY+++PKD+G + YE + ++D+++EKA+LAK RA+++KQE EGR+QPDPEIVK LL M FS A RAALKT NK F+AALDWA+ HSED DF PL G DD+ SK ++AK IPLELQRLF+RLQLLD RT ST+ LT +GFKW++D+GR+QHDAHEL RLLIDRLE D++ SK+N+GLVSALYEG L NQVKCL C HVSER+E +RDVLLQVAGQEDLVTSLLSYTRPERLSGDNKYFCDQCQ KQDALRSQTLRALPPVLIFSLNRFEFDFET+ERVKV+ FKYP+ LDMEPFVEGRAW+GNDNSDESQVPDLAGDP+ PGTCR+RQKWVPQAW DA+A A + + + AS D E GGLVY+LLAVVVHRGSAYSGHYHA I+D LQEGRW+PPSG S+ A ++EEK +G K + G+ G G K + + P LL+++ + P H+ L+ PC++L LR++ R RLG K WDKVF RL+ F++ H + F+LQ G +EVLL+ GD AEP G A + G G +G D E+++ LRLSL+Q G D GG G V G VDALA+EKHGRWFSFDDRKVTPISI DLQKPF GAETAYLL+YR+RSLD E+ SP S A + A AS+ G G LPG LHMTS PP +W+ KV +EN SL++AK ++EAD+H + + VW+P+LL Q PHL+PL+P + L+QLPE LR PL+L++DDRQTV DLKK V+R+G+ ++MG D +GR RLSELT+HGPGM+ SKHLPD PR XXXXXXXXXXXXX +A LGDL+WD + + VL+W+G + GVE+ +P E RPIRL V+VLK +E+ + +AWID ILEQ G PERRG+RAE W D+Y RAGVTA E++ +VSNRG VS +KMCISLLR P SG G +EAVQIAGP GVF+EW+ + K G G +++ LEL EG ELLVEEQGA +KLI + + +SLA+MEAARR+RLV++EVEVDD +++++++ L LAHD AV H G+ V ++LE D + +IPH+KA CLL L P L ++P+S + P GT +A ++G +LAL +V +VRL SG L+ES+ G SL A + G+ ML+WGAP +GK VKF + GN+ A D TR G+ L V ADLKEPVSALKARM++ A E +V+ K + XXXXXXXXXXXXXX XXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXKG A D+ G + + +D G + D+LVEESGIL +EI+LE+GRVPRPRELEI V AYAPHF+GLAAAAA E+L K ++++ ++A + D AR VPTGLSP VWPDEEA +K+ ++ER +G P
Sbjct: 1 MAHLGAFKNMFEEIDDSSGPTVQQGDEEALGRAESGFVGLDNQGATCYLNALLQAIYMTPELRHGLYAVDPKDLGGDKYEAEREQDRENEKARLAKERARLKKQEKEGRMQPDPEIVKGLLDMSFSENGARRAALKTKNKSFNAALDWAMEHSEDKDFEDPLPGYDDDXXXXXXXXXXXXXXXXXXXXXXXXXXGSKSRNAKMIPLELQRLFARLQLLDARTVSTEDLTERGFKWKNDEGRMQHDAHELIRLLIDRLERDMKLSKVNAGLVSALYEGDLANQVKCLHCGHVSERREKYRDVLLQVAGQEDLVTSLLSYTRPERLSGDNKYFCDQCQEKQDALRSQTLRALPPVLIFSLNRFEFDFETMERVKVKQEFKYPLTLDMEPFVEGRAWSGNDNSDESQVPDLAGDPEVPGTCRNRQKWVPQAWNDAQAEAITLQTSLAATSDPGQASKFDGDGGRAGGIGDGLRREED--------------EGGGLVYELLAVVVHRGSAYSGHYHALIRDCLQEGRWLPPSGLNPSQ-----PADAGEDEEKEGVGLGGDGGXQEESKKSDGSLGAGTGPHRI-----------GGKTQQXXXXXR-PMELLLEVFEDAPKHQELEKPCLQLKELRAKTRSRLGGKRWDKVFKP---RLDKFIKDHADVFMLQETETNG-VEVLLLHRPGGGEGDAAEPPAGNAA--ESGVGGAPGADGSDPELEEVLRLSLQQQSAGHQSLAPANGTALADTAGDGGXXXXKGLAASKAVPPGAVDALASEKHGRWFSFDDRKVTPISIRDLQKPFEGAETAYLLIYRSRSLDQEAGSPVSPAD--IAAAVSASS-----------------------AGSGGPRNLPGGLHMTSVPPSYWMDKVDTENDSLKTAKDSKEADLHGIKVTVWVPKLLQVQMPHLVPLDPSSSNLDQLPEALRSPLVLHLDDRQTVKDLKKEVVKRLGEFCREMGVSD-MGRARLSELTAHGPGMYPSKHLPDQPGHRANSPRRXXXXXXXXXXXXXXXXXDAGATSTATVPTLGDLDWD--QPEGPLVLLWEGRRIDGVEVPDPGPETRPIRLVVSVLKASEDMDQSAWIDNILEQAGGFGRVPERRGSRAETSQTWSDLYTRAGVTASEVVELVSNRGPAEVSTSKMCISLLRNFSSAVAPDYLDSGR-----KRASERGGGGAGAPQMEAVQIAGPSGVFEEWQSSGLAGKGGSGAELAGLELSEGSELLVEEQGAVNKLIAMTEFSSLAEMEAARRSRLVRVEVEVDDDLVDTLRSHSLPLAHDVAVATHEGQRVLLHLECDVHATSIPHLKAFCLLGLVPALKENTIPSSQIQALLPXXXXXXRGTAAAPASGAKEELALVGLVKTVRLENTKSGN---TLDESS---TGASLFATRISEGAQLMLQWGAPPATGKALVKFYVRVGNSTATARDPTRSGSTFGPLEVIADLKEPVSALKARMVKKAAEMTYIVEDXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------KPEGGAEGXXXXXXXXXXXXXXASKXXXXXXXXXXXXXXXXXDGIPXXXXXXXXXXXXXXXXXXKG---------------------------------------------------AATDDNGNKHKVDVD----GPL-------------------FQDRLVEESGILGGQEIYLEDGRVPRPRELEITVLAYAPHFLGLAAAAAAERLKAK-----VSQISEISDAAADXXXXXXXXXXKAADPADPARGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVPTGLSPSAVWPDEEAARKKGDVERFRGDP 1690
BLAST of mRNA_H-paniculata_contig211.5512.1 vs. uniprot
Match: A0A6H5JBL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL7_9PHAE) HSP 1 Score: 582 bits (1501), Expect = 3.280e-185 Identity = 369/752 (49.07%), Postives = 437/752 (58.11%), Query Frame = 3
Query: 468 MTPELRHGLYSINPKDIGEEAYEKDAQKDKDDEKAKLAKARAKIRKQEAEGRVQPDPEIVKQLLTM-FSVQAAHRAALKTDNKGFDAALDWALAHSEDPDFNAPLEGDDDEEAGEDGDAGDVTAEKKDKRRDK---KKSKDKSAKFIPLELQRLFSRLQLLDTRTDSTDRLTTKGFKWQDDQGRVQHDAHELNRLLIDRLEYDLRKSKINSGLVSALYEGVLVNQVKCLACEHVSERKETFRDVLLQVAGQEDLVTSLLSYTRPERLSGDNKYFCDQCQNKQDALRSQTLRALPPVLIFSLNRFEFDFETLERVKVQTAFKYPVALDMEPFVEGRAWAGNDNSDESQVPDLAGDPDTPGTCRSRQKWVPQAWKDAEAHAQAVYERSLSRDERAAASSLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTREEGGLVYDLLAVVVHRGSAYSGHYHAFIKDSLQEGRWMPPSGFELSEVEAAATAALAQEEEKAALGNKKNNSGNYKPGKGXXXXXXXXXXXXXDESAKGENG---GRDPKDPKTLLVDILRNKPNHEALQLPCMKLPALRSEIRKRLGFK-WDKVFGSMHGRLEHFLERHGETFLLQAEAPGGSMEVLLM-------GDDAEPEGGGAGGGDRGKSGVEAGEGDDDEMQQALRLSLEQSMNGTXXXXXXXXXXXXDVGGTILKSGGTVVSKGTVDALAAEKHGRWFSFDDRKVTPISILDLQKPFSGAETAYLLVYRARSL 2678
MTPELRHGLY+++PKD+G + YE + ++D+++EKA+LAK RA+++KQE EGR+QPDPEIVK LL M FS A RAALKT NK F+AALDWA+ HSED DF PL G DD K SK K+AK IPLELQRLF+RLQLLD RT ST+ LT +GFKW++D+GR+QHDAHEL RLLIDRLE D++ SK+N+GLVSALYEG L NQV AGQEDLVTSLLSYTRPERLSGDNKYFCDQCQ KQDALRSQTLRALPPVLIFSLNRFEFDFET+ERVKV+ FKYP+ LDMEPFVEGRAW+GNDNSDESQVP+LAGDP+ PGTCR+RQKWVPQAW DA+A A + SL+ A S H A KD LQEGRW+PPSG S+ A ++EEK +G + G DE K + G P LL+++ + P H+ L PCM+L LR++ R RLG K WDKVF RL+ F+ H + F+LQ G +EVLL+ GD AEP AG A +QS+ V G VDALA+EKHGRWFSFDDRKVTPISI DLQKPF GAETAYLL+YR+R++
Sbjct: 1 MTPELRHGLYAVDPKDLGGDKYEAEREQDRENEKARLAKERARLKKQEKEGRMQPDPEIVKGLLDMSFSENGARRAALKTKNKSFNAALDWAMEHSEDKDFEDPLPGYDDXXXXXXXXXXXXXXXXXXXXXXXXXXKGSKSKNAKMIPLELQRLFARLQLLDARTVSTEDLTERGFKWKNDEGRMQHDAHELIRLLIDRLERDMKHSKVNAGLVSALYEGDLANQV----------------------AGQEDLVTSLLSYTRPERLSGDNKYFCDQCQEKQDALRSQTLRALPPVLIFSLNRFEFDFETMERVKVKQEFKYPLTLDMEPFVEGRAWSGNDNSDESQVPELAGDPEVPGTCRNRQKWVPQAWNDAQAEA-ITLQTSLA-------------------------------------------------------------ATSDHGQA-AKDCLQEGRWLPPSGLNPSQ-----PAHAGEDEEKEGVGLGGDGGGQ-------------------DEGKKSDGPLGVGTGLAGPMELLLEVFEDAPKHQDLGKPCMQLKELRAKTRSRLGGKRWDKVFKP---RLDKFIMDHADVFMLQETETSG-VEVLLLHRPGGGEGDAAEPP---------------AGNAXXXXXXXAPGADGQQSLAPANGTALADTVGDGXXXXXXXXXASKAVPPGAVDALASEKHGRWFSFDDRKVTPISIRDLQKPFEGAETAYLLIYRSRNI 624
BLAST of mRNA_H-paniculata_contig211.5512.1 vs. uniprot
Match: A0A6H5JBH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBH2_9PHAE) HSP 1 Score: 280 bits (715), Expect = 3.610e-79 Identity = 183/399 (45.86%), Postives = 241/399 (60.40%), Query Frame = 3
Query: 3345 LGDLEWDNMRDQEATVLMWDGYDVGGVELDEPTHENRPIRLTVAVLKPTEEEEATAWIDAILEQGGAARPGPERRGARAERCAYWQDVYVRAGVTAQELMRIVSNRGGGGVSVAKMCISLLR-------PAVSGSGEGXXXXXXXXXXXXXXXGGVTLEAVQIAGPEGVFQEWKVNDFVQKTGGGMDVSLELQEGCELLVEEQGAASKLIRV-DAASLADMEAARRNRLVQLEVEVDDSVIESVKNAKLALAHDHAVEHHAGRPVTIYLEADGESATIPHVKARCLLNLAPGLI--SLPTSALNIPFPTSTPAPTGTNSAASAGLAGQLALASMVSSVRLTGNDSGTYGSVLEESAGSGDGMSLHAAEVRSGSSFMLEWGAPLPSGKTRVKFQLVTGNN 4511
LGDL+W + + VL+WDG + GVE+ +P RPIRL V+VLK +E+ + +AWID ILEQ G PERRG+RAE W D+Y RAGVTA E++ +VSNRG VS +KMCISLLR P GSG G +EAVQIAGP GVF+EWK + G LEL EG ELLVEEQGA +KLI + + +SLA+MEAARR+RLV++EVEVDD ++E++++ L LAHD AV H G+ V + LE D + ++PH+KA CLL L P L ++P+S + P GT +A ++G +LAL +V +VRL SG L+ES+ G SL AA V G+ ML+WGAP +GK VKF + G +
Sbjct: 67 LGDLDWG--QPEGPLVLLWDGRRIDGVEVPDPGPGTRPIRLVVSVLKASEDIDQSAWIDNILEQAGGFGRVPERRGSRAET---WSDLYTRAGVTASEVVELVSNRGPAEVSTSKMCISLLRNFSSAVTPDYLGSGR-----KRASERGGGGAGASQMEAVQIAGPSGVFEEWKGGAGAELAG------LELSEGSELLVEEQGAVNKLIAMTEFSSLAEMEAARRSRLVRVEVEVDDDLVETLRSHGLPLAHDVAVATHEGQRVLLNLECDVHATSVPHLKALCLLGLVPALKENAVPSSQIQALLPPXXXXARGTATAPASGAKEELALVGLVKTVRLEDTKSGN---ALDESS---TGASLFAARVTDGAQLMLQWGAPPATGKALVKFYVRVGES 443
BLAST of mRNA_H-paniculata_contig211.5512.1 vs. uniprot
Match: A0A7R9UHF4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UHF4_9STRA) HSP 1 Score: 281 bits (718), Expect = 1.430e-72 Identity = 259/798 (32.46%), Postives = 350/798 (43.86%), Query Frame = 3
Query: 345 KPGGGFAKV------EDEVLGRAESGFVGLDNQGATCYLNALLQAMYMTPELRHGLYSINPKDIGEEAYEKDAQKDKDDEKAKLAKARAKIRKQEAEGRVQPDPEIVKQLLTM-FSVQAAHRAALKTDNKGFDAALDWALAHSEDPDFNAPLEGDDDEEAGEDGDAGDVTAEKKDKRRDKKKSKDKSAKFIPLELQRLFSRLQLLDTRTDSTDRLTTKGFKWQDDQGRVQHDAHELNRLLIDRLEYDLRKSKINSGLVSALYEGVLVNQVKCLACEHVSERKETFRDVLLQVAGQEDLVTSLLSYTRPERLSGDNKYFCDQCQNKQDALRSQTLRALPPVLIFSLNRFEFDFETLERVKVQTAFKYPVALDMEPFVEGRAWAGNDNSDESQVPDLAGDPDTPGTCRSRQKWVPQAWKDAEAHAQAVYERSLSRDERAAASSLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTREEGGLVYDLLAVVVHRGSAYSGHYHAFIKDSLQEGRWMPPSGFELSEVEAAATAALAQEEEKAALGNKKNNSGNYKPGKGXXXXXXXXXXXXXDESAKGENGGRDPKDPKTLLVDILRNKPNHEALQLPCMKLPALRSEIRKRLGFKWDKVFGSMHGRLEHFLERHGETFLLQAEAPGGSMEVLLMGDDAEPEGGGAGGGDRGKSGVEAGEGDDDEMQQALRLSLEQSMNGTXXXXXXXXXXXXDVGGTILKSGGTVVSKGT----------VDAL---AAEKHGRWFSFDDRKVTPISILDLQKPFSGAETAYLLVYRARSL 2678
+PG G A+ + GR +GF GL+NQGATCYLN+LLQA+Y+TPELR GL+ + +++G L A + E + V+QL + FSV AA +KT N+ F+AA+++ +H+E+ EA E A+K R +K + IPLELQRLF+ LQL +T LT KGF+W+ GR QHD HEL RLL+D LE L KS LV +L GV +V+C C VSER+E F D+++QV G DL+ SL +YT E+L G N Y C+ C K+DA LR LPP+L SL RF F+F+TL+R KV TAF++P+ LDM PFVE E D R ++ QA ++A A A+ E R A+S L T L YDL AV+VHRG+A+SGHYHAFI+D L EG W PP G + A A+ A +E A+ D + GR P + + AL ++K W ++ G L F+E + F S V L+ D + K+ E XXXXXXXXXXXX K VD L +A+ +G+WF F+D +VTP SI L++ F G + AY+L+YR+RSL
Sbjct: 15 RPGSGHAEAMASRARASKFQGRGATGFAGLENQGATCYLNSLLQALYLTPELRAGLFQVGVEELG------------------LCATGAAAEAPQLE--TSANDAYVQQLQGLGFSVAAAEFGCIKTKNESFEAAMEYIWSHAEEA------------EAWE--------AQKSSAPRKRK------PRHIPLELQRLFTFLQLSKRGVVATQELTQKGFQWETMDGRQQHDLHELQRLLLDALERSLSKSS-GKELVQSLCRGVTARRVRCCYCGRVSEREEQFYDLMVQVQGLSDLIASLFAYTDMEKLEGANAYECEACGQKRDAELGIVLRQLPPLLNISLTRFAFNFQTLQREKVTTAFEFPLVLDMAPFVEEARLKSFSAGKERH--------DLLLEMRQNSVFIDQASEEARA---AMLEEDAGVALRRASSGL----------------------------RSQTDAADPLWYDLYAVIVHRGNAFSGHYHAFIRDVLHEGHWTPPKG---PHAKRATPASRAAADEAVAV-----------------------LATCFDGAMTDAESGR------------------------PRLSMSALGFNLKKATEKSWTALYKEELGPLTRFVEARSDVFAYNKR----SKTVTLLKDVPQVS----------KASDEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDKEAEEKDAESADFVDRLERWSADHYGQWFDFNDSRVTPSSIQGLREAFQGRDCAYMLLYRSRSL 662
BLAST of mRNA_H-paniculata_contig211.5512.1 vs. uniprot
Match: A0A7S1CH08_9STRA (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CH08_9STRA) HSP 1 Score: 234 bits (596), Expect = 1.120e-61 Identity = 199/629 (31.64%), Postives = 265/629 (42.13%), Query Frame = 3
Query: 390 RAESGFVGLDNQGATCYLNALLQAMYMTPELRHGLYSINPKDIGEEAYEKDAQKDKDDEKAKLAKARAKIRKQEAEGRVQPDPEIVKQLLTMFSVQAAHRAALKTDNKGFDAALDWALAHSEDPDFNAPLEGDDDEEAGEDGDAGDVTAEKKDKRRDKKKSKDKSAKFIPLELQRLFSRLQLLDTRTDSTDRLTTKGFKWQDDQGRVQHDAHELNRLLIDRLEYDLRKSKINSG------LVSALYEGVLVNQVKCLACEHVSERKETFRDVLLQVAGQEDLVTSLLSYTRPERLSGDNKYFCDQCQNKQDALRSQTLRALPPVLIFSLNRFEFDFETLERVKVQTAFKYPVALDMEPFVEGRAWAGNDNSDESQVPDLAGDPDTPGTCRSRQKWVPQAWKDAEAHAQAVYERSLSRDERAAASSLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTREEGGLVYDLLAVVVHRGSAYSGHYHAFIKDSLQEGRWMPPSGFELSEVEAAATAALAQEEEKAALGNKKNNSGNYKPGKGXXXXXXXXXXXXXDESAKGENGGRDPKDPKTLLVDILRNKPNHEALQLPCMKLPALRSEIRKRLGFKWDKVFGSMHGRLEHFLERHGETF 2258
R +GFVGL NQGATCYLN+LLQAMYMTPELR GL+S++P +G + E+D A + K + IP+ELQRLF+RL LLD R+ ST+ LT KGFKW + +G VQHD HELNR L D +E L+ K +G L+ LY CLAC +R E DV+LQV G DLV SL SYT E ++GDN+ +CD C K DA R + +LPPVL+F+LNRF FD T +R KV F +P+ LDM F +G + G + + L GD G KDAE A A+ D AA S+ + E VYDL V++H G A+ GHY+A+I+D+L+EGRW PP + SGN XXXXXXXXXX + + P L+ +LR+ P + L + L L S +++ G W++ + G L+ FL++H + F
Sbjct: 38 RGSTGFVGLQNQGATCYLNSLLQAMYMTPELRGGLFSLDPDMLGVQQMEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAR-----------------------------------------RRKKPRVIPIELQRLFARLHLLDQRSVSTEHLTEKGFKWTNAEGSVQHDVHELNRNLYDAVEKSLKGLKDGAGQTIRADLIDRLYRIRAAYHTHCLACGTARDRAEDQFDVMLQVQGFPDLVASLASYTTHELMAGDNRVWCDTCDAKADAARGVVINSLPPVLVFALNRFAFDMRTFDRKKVTDRFDFPLVLDMREFKKGGKFDGAVAAADGT---LRGDGAGEG-------------KDAEEAAAAMASAEAKLD--AARESM-----------VWLSHLESEEGRTMAAATSASLEGLEHVYDLFCVIIHSGDAHHGHYYAYIRDNLEEGRWEPPYDVV-----------------------RDGGSGNXXXXXXXXXXXXXXXXAAGFKEREAAKAAASGDSPLKLMKLLLRSAPRNATTGLLTVSLDRLGSMVKENTGEGWNQQYRVKWGGLKQFLQQHDKVF 573
BLAST of mRNA_H-paniculata_contig211.5512.1 vs. uniprot
Match: A0A835YZ71_9STRA (USP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ71_9STRA) HSP 1 Score: 217 bits (553), Expect = 1.520e-59 Identity = 128/330 (38.79%), Postives = 167/330 (50.61%), Query Frame = 3
Query: 888 KFIPLELQRLFSRLQLLDTRTDSTDRLTTKGFKWQDDQGRVQHDAHELNRLLIDRLEYDLRKSKINSGLVSALYEGVLVNQVKCLACEHVSERKETFRDVLLQV--AGQED----LVTSLLSYTRPERLSGDNKYFCDQCQNKQDALRSQTLRALPPVLIFSLNRFEFDFETLERVKVQTAFKYPVALDMEPFVEGRAWAGNDNSDESQVPDLAGDPDTPGTCRSRQKWVPQAWKDAEAHAQAVYERSLSRDERAAASSLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTREEGGLVYDLLAVVVHRGSAYSGHYHAFIKDSLQEGRW 1859
K IPLE+QRLF+RLQ+L +T ST+ LTTKGFKWQD GRVQHD HELNRLLID LE L + + L+ LY G ++V CL+C +S+R E F+D++L V G D LV++L + +PE + G+N+Y+C++C K D R Q LR LPP+L+FSLNRF+FD +T+ERVKV F++P+ LD PFV ++ GL YDLL VV+HRGSAYSGHYHA+I+D L EG W
Sbjct: 60 KLIPLEVQRLFARLQMLQVQTISTEDLTTKGFKWQDRDGRVQHDVHELNRLLIDALERSLAHTPSGAALIPTLYTGQATSRVTCLSCGRMSDRDEAFQDLMLMVNPGGDSDPDSNLVSALAEHIQPEAMVGENQYWCERCDRKVDGERRQMLRELPPLLVFSLNRFQFDMKTMERVKVSAKFEFPLVLDTAPFVN--------------------------------------------------------------------------------------------------DQDGL-YDLLGVVLHRGSAYSGHYHAYIRDCLGEGAW 290
BLAST of mRNA_H-paniculata_contig211.5512.1 vs. uniprot
Match: A0A7S2SD68_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SD68_9STRA) HSP 1 Score: 212 bits (540), Expect = 1.820e-55 Identity = 147/369 (39.84%), Postives = 204/369 (55.28%), Query Frame = 3
Query: 369 VEDEVLGRAESGFVGLDNQGATCYLNALLQAMYMTPELRHGLYSINP-----KDIGEEAYEKDAQKDKDDEKAKLAKARAKIRKQEAEGRVQPDPEIVKQLLTM-FSVQAAHRAALKTDNKGFDAALDWALAHSEDPDFNAPLEGDDDEEAGEDGDAGDVTAEKKDKRRDKKKSKDKSAKFIPLELQRLFSRLQLLDTRTDSTDRLTTKGFKWQDDQGRVQHDAHELNRLLIDRLEYDLRKSKINSGLVSALYEGVLVNQVKCLACEHVS-ERKETFRDVLLQVAGQEDLVTSLLSYT-RPERLSGDNKYFCDQCQNKQDALRSQTLRALPPVLIFSLNRFEFDFETLERVKVQTAFKYPVALDMEPFV 1451
V+ GRA G+VGL+NQGATCYLN+LLQA+YM P+ R + I+P D+ ++ ++ A+++++ E VQ D +V QL + F A RA L+T NKGFD ALDW A+SE P F+ PL G ++E+ G++ A D K+ KRR + +ELQRLF+RLQL D R ST LT++GF + VQHD HEL L+D LE +L ++ S LV AL+EG Q++CL C H+S E FR ++LQV G +L SL E+ D CD C K+ + LPP+L SLNRFE ++ T ER KV F++P+ LD+ P+V
Sbjct: 32 VDAPAAGRAACGYVGLENQGATCYLNSLLQALYMNPDFRRQFFHIDPVQELSADLADKEAKEKARREQEXXXXXXXGKTXXXXXXXXEAPVQVDETVVTQLQGLGFPPNGARRAVLETKNKGFDIALDWCFANSEKPGFDDPLPGMEEEDEGKEV-AADAVPRKQRKRR--------KLPIMAIELQRLFARLQLADQRAVSTADLTSRGFNFSGSDASVQHDVHELITKLLDALEQNLARTS-GSKLVPALFEGKKRAQLRCLTCGHISGPPPELFRTLMLQVKGFPNLEASLKDGEFEVEKRETD----CDSCGMKRAKEFVNVMHHLPPLLWTSLNRFELNYATGERKKVVDKFEFPLLLDLAPYV 386
BLAST of mRNA_H-paniculata_contig211.5512.1 vs. uniprot
Match: A0A5A8E2Q8_CAFRO (USP domain-containing protein n=9 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E2Q8_CAFRO) HSP 1 Score: 201 bits (511), Expect = 6.340e-48 Identity = 169/558 (30.29%), Postives = 238/558 (42.65%), Query Frame = 3
Query: 291 DSMAHFGAFKNMFEEIGD-------KPGGGFAKVEDEVL-----GRAESGFVGLDNQGATCYLNALLQAMYMTPELRHGLYSINPKDIGEEAYEKDAQKDKDDEKAKLAKARAKIRKQEAEGRVQPDPEIVKQLLTMFSVQAAHRAALKTDNKGFDAALDWALAHSEDPDFNAPLEGDDDEEAGEDGDAGDVTAEKKDKRRDKKKSKDKSAKFIPLELQRLFSRLQLLDTRTDSTDRLTTKGFKWQDDQGRVQHDAHELNRLLIDRLEYDLRKSKINSGLVSALYEGVLVNQVKCLACEHVSERKETFRDVLLQVAGQEDLVTSLLSYTRPERLSGDNKYFCDQCQNKQDALRSQTLRALPPVLIFSLNRFEFDFETLERVKVQTAFKYPVALDMEPFVEGRAWA------GNDNSDESQVPDLAG----DPDTPGTCRSRQKWVPQAWKDAEAHAQAVYERSLS-RDERAAASSLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT-------REEGGLVYDLLAVVVHRGSAY-SGHYHAFIKDSLQEGRWMPPS 1871
DS A GAF NMF D + G G E + RA S FVGLDNQGATCY+N+LLQ +YMTPELR +++++ D VK+L + ++A A +G DA+ A K+K+ K + +PLELQRLF+RLQLLD R+ T+ LT +GFKW QG VQHD ELNR L +R+E L + LV LY+GV N + C+ C + + DV++ V G DLV ++ E ++G N C+ C K LR + LP VL+ + NR+E D T E VK++ F+YP+ LD PFV G + A G ++ + AG + D C ++ +A A ++L+ E AA++ D + RE+ VYDL VV+H GS +GHY AFI+D++ EG+W PP+
Sbjct: 3 DSDAPMGAFGNMFARDTDSDEAPTHRAGAGVTAAAAEGIYVPPDARAASKFVGLDNQGATCYMNSLLQCLYMTPELRSAIFALST-----------------------------------------DALDVKRLEELEELEAEAAA------RGNDASAXXXXXXXXXXXAAA-----------------------------KEKAIRKRCRVLPLELQRLFTRLQLLDRRSIGTNELTERGFKWTGSQGSVQHDVAELNRKLYERIEKSLARLP-GDRLVGDLYKGVTGNAMTCMRCSAPRQSMQDAYDVIVTVKGFADLVGAMSGSVAKEVMAGSNAVTCEACDMKTPTLRGSVISHLPAVLVVTANRYELDMRTFEPVKIKDRFEYPLVLDARPFVAGGSVAAAQERLGVAHAALIAAGEAAGLGRDEMDALSACAGKESREQRAQCGELLEAAGGGSKALADAAEAVAAATADVRDKEKQARDGCVWLSALDCATGREASAALSARLATLPREDLSQVYDLFGVVIHHGSTSGAGHYTAFIRDTVGEGQWKPPT 483
BLAST of mRNA_H-paniculata_contig211.5512.1 vs. uniprot
Match: A0A2P6NR45_9EUKA (USP domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NR45_9EUKA) HSP 1 Score: 199 bits (507), Expect = 1.000e-47 Identity = 160/460 (34.78%), Postives = 223/460 (48.48%), Query Frame = 3
Query: 216 GPPHLSVSRLLLLLDWIVRGVGRGGDSMAHFGAFKNMFEEIGD-----KPGGGFAKV-----EDEVLGRAESGFVGLDNQGATCYLNALLQAMYMTPELRHGLYSINPKDIGEEAYEKDAQKDKDDEKAKLAKARAKIRKQEAEGRVQPDPEIVKQLLTM------FSVQAAHRAALKTDN-KGFDAALDWALAHSEDPDFNAPLEGDDDEEAGEDGDA---------GDVTAEKKDKRRDKKKSK-----------------DKSAKF----IPLELQRLFSRLQLLDTRTDSTDRLTTKGFKWQDDQGRVQHDAHELNRLLIDRLEYDLRKSKINSGLVSALYEGVLVNQVKCLACEHVSERKETFRDVLLQVAGQEDLVTSLLSYTRPERLSGDNKYFCDQCQNKQDALRSQTLRALPPVLIFSLNRFEFDFETLERVKVQTAFKYPVALDMEPFVE 1454
P + + LLL I G + SM G+ +FEE D G K + R E GFVGL NQGATCYLN+L+Q MYMTPELR G+Y ++ + +G E K K++ E ++ P V + +T F A RA + N + F++ + W +PD + + E+ GD+ G +E + +++KK DK+AK +P ELQRLF RLQL DT +T+ LT K F W + QHD HELNRLL D +E L+++ N L+S LY G LVN++ C AC S R+E F+DV L V G + SL S E L G N+YFC+ C K DA++ R+LPPV+IFSL RFE+D+ +R K+ + FKYP+ L+M + E
Sbjct: 80 NPTQDTSRQCPLLLIEIAEGHSQAASSMLGLGS---LFEEGDDVESITNVGAANGKTVYRPQRTHMKPRPEHGFVGLANQGATCYLNSLIQCMYMTPELRSGIYQLSQETLGVEN-----------------KPPPSPTKEKKETQITPPVSQVIEPVTSGLKDMGFDEGVAKRAVKRYPNCENFESLVIWCC----EPDASETYD-----ESANMGDSLFDATFWPGGASVSEPTTEDKEEKKXXXXXXXXXXXXXXXXXXXDKTAKKPFLKVPYELQRLFGRLQLADTNQVTTESLT-KSFGWTGSEVYDQHDVHELNRLLFDAIERSLQRTTSNH-LISDLYRGTLVNKIICQACHRTSAREEHFQDVTLIVKGFPSVEESLKSLVNFELLEGSNQYFCEGCNAKADAMKGVLFRSLPPVIIFSLGRFEYDWTEDKRKKITSPFKYPLVLNMSQYKE 508
BLAST of mRNA_H-paniculata_contig211.5512.1 vs. uniprot
Match: A0A1Y1IFY9_KLENI (Ubiquitin carboxyl-terminal hydrolase 7 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IFY9_KLENI) HSP 1 Score: 199 bits (506), Expect = 2.380e-47 Identity = 177/598 (29.60%), Postives = 254/598 (42.47%), Query Frame = 3
Query: 378 EVLGRAESGFVGLDNQGATCYLNALLQAMYMTPELRHGLYSINPKDIGEEAYEKDAQKDKDDEKAKLAKARAKIRKQEAEGRVQPDPEIVKQLLTM-FSVQAAHRAALKTDNKGFDAALDWALAHS----------------ED-PDFNAPLEGDDDEEAGEDG-----------DAGDVTAEKKD---------------------------------------------KRRDKKKSK-------------DKSA---------------KFIPLELQRLFSRLQLLDTRTDSTDRLTTKGFKWQDDQGRVQHDAHELNRLLIDRLEYDLRKSKINSGLVSALYEGVLVNQVKCLACEHVSERKETFRDVLLQVAGQEDLVTSLLSYTRPERLSGDNKYFCDQCQNKQDALRSQTLRALPPVLIFSLNRFEFDFETLERVKVQTAFKYPVALDMEPFVEGRAWAGNDNSDESQVPDLAGDPDTPGTCRSRQKWVPQAWKDAEAHAQAVYERSLSRDERAAASSLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTREEGGLVYDLLAVVVHRGSAYSGHYHAFIKDSLQEGRWMP 1865
E R SGFVGL NQG TCYLN+LLQ M++TPELR GLY + +++G A E ++ + A K ++ +G++ ++ L+ M F V RA LK + A DW LA + ED P AP D G +G G +TA +D K R+ + ++ D +A + + +ELQ+ F+ LQ +D + ST+ LT + F W + RVQHD HELNR+L + +E+ L+ ++ S LV LY G LVNQV+CL C VSER E F D+ + V G L SL + + E L GDN+YFC++CQ K DA RSQ R+LPP+L L RFE+D++ ER K+ T F +P+ L++ P++ + G + ++ AG P PG G ++DLL+VV+H GSA+SGHYHA+I+D L EG+ P
Sbjct: 37 EAQPRGASGFVGLQNQGMTCYLNSLLQTMFLTPELRAGLYQVPLQELGLNADEMQSEA----AAGEPLGATPKEHEEAKQGQIDAGAAAMESLMGMGFPVDEVERA-LKKFHNDVQRAADWLLARACSGDKAELPDEDTDTYEDLPPLEAPGADDSSPLMGSEGLIVSMEMDKEPVEGPLTAVAQDAVDAFNKRLYDMDESGMEAEGLSSSQKSVNGANGSQEHGRGTQGGKHRETEDAEGEXXXXAAAAIGGDNTANTPAIAVPPKPKRRRRGLIIELQKAFAWLQAVDQKAISTEDLT-RVFGWDGSEARVQHDVHELNRILFESVEFYLKGTQQES-LVKDLYHGTLVNQVECLRCGAVSERHEEFSDIPVVVKGFSSLEESLAAAAKAEMLDGDNQYFCERCQAKVDAQRSQRFRSLPPLLTLPLCRFEYDWDRDERRKITTPFSFPLTLNLAPYMAPPSSDGQPANHDAAANGSAGAPGGPG--------------------------------------------------------------------------GAALFDLLSVVIHSGSAHSGHYHAYIRDMLNEGKGRP 553 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig211.5512.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig211.5512.1 >prot_H-paniculata_contig211.5512.1 ID=prot_H-paniculata_contig211.5512.1|Name=mRNA_H-paniculata_contig211.5512.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1814bp MAHFGAFKNMFEEIGDKPGGGFAKVEDEVLGRAESGFVGLDNQGATCYLNback to top mRNA from alignment at H-paniculata_contig211:179..32097- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig211.5512.1 ID=mRNA_H-paniculata_contig211.5512.1|Name=mRNA_H-paniculata_contig211.5512.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=31919bp|location=Sequence derived from alignment at H-paniculata_contig211:179..32097- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig211:179..32097- >mRNA_H-paniculata_contig211.5512.1 ID=mRNA_H-paniculata_contig211.5512.1|Name=mRNA_H-paniculata_contig211.5512.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=10884bp|location=Sequence derived from alignment at H-paniculata_contig211:179..32097- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |