mRNA_H-paniculata_contig21061.5506.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig21061.5506.1 vs. uniprot
Match: A0A6H5KH94_9PHAE (GH16 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KH94_9PHAE) HSP 1 Score: 280 bits (715), Expect = 2.150e-88 Identity = 130/173 (75.14%), Postives = 148/173 (85.55%), Query Frame = 1
Query: 1 HENKGRGSTEIDIIEAQPGTSDDPLMNLGKVNSPYVSTTLQLAPGIPKNRPTNGHLLSPDNIWYEGMKFGDNSTLNYHFYGMHVDKTTPQEPVYRGADQAYLADAISGLSPLERTHFHELHNYKLEWMP--------GKGGYLRWYIDDVEVLGIDGHTVEKHGTQVRSQCNF 495
H +GRGSTEIDI+EAQPGTSDDPLMNLGKVNSPY+STTLQLAPGIP +RPTNG LLSP+N WYEGM+F +NS+LNYHFYGMHVDKTTPQEPVYRGADQAY+ADAISGL+ L RTHFHE HNYKLEW+P G G+L+WYIDD VLGID TVEKHGTQ+ ++ ++
Sbjct: 262 HGYQGRGSTEIDILEAQPGTSDDPLMNLGKVNSPYLSTTLQLAPGIPVHRPTNGELLSPENTWYEGMQFAENSSLNYHFYGMHVDKTTPQEPVYRGADQAYIADAISGLTSLTRTHFHEYHNYKLEWVPPPPTRGDAGPRGHLKWYIDDEMVLGIDAETVEKHGTQIPNEPSY 434
BLAST of mRNA_H-paniculata_contig21061.5506.1 vs. uniprot
Match: A0A835YN37_9STRA (Beta-1,6-glucan active enzyme, family GH16 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN37_9STRA) HSP 1 Score: 182 bits (463), Expect = 1.230e-51 Identity = 84/167 (50.30%), Postives = 113/167 (67.66%), Query Frame = 1
Query: 1 HENKGRGSTEIDIIEAQPGTSDDP-LMNLGKVNSPYVSTTLQLAPGIPKNRPTNGHLLSPDNIWYEGMKFGDNSTLNYHFYGMHVDKTTPQEPVYRGADQAYLADAISGLSPLERTHFHELHNYKLEWMPGK-GGYLRWYIDDVEVLGIDGHTVEKHGTQVRSQCNF 495
H ++GRGSTEIDIIE G P ++ K+ PY+S TLQ+APGI +RP H P+N WYEGM +G N+T N+HFYG+ VDKT P EPVYR Q+Y AD IS ++ L RTHF++ H YKLEW PG GGYL WY+DD + ID +++ +G+Q+ + ++
Sbjct: 220 HAHQGRGSTEIDIIEVMAGKPGYPEIIEWDKIGLPYMSATLQVAPGIEDHRPEQDHQQQPENTWYEGMSYGPNTTQNFHFYGLLVDKTLPMEPVYRSEKQSYRADGISAITRLARTHFNDFHTYKLEWRPGADGGYLAWYLDDELLFEIDQASLDPYGSQIPDEPSY 386
BLAST of mRNA_H-paniculata_contig21061.5506.1 vs. uniprot
Match: A0A7R9YBD8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBD8_9STRA) HSP 1 Score: 159 bits (402), Expect = 3.250e-45 Identity = 75/162 (46.30%), Postives = 107/162 (66.05%), Query Frame = 1
Query: 10 KGRGSTEIDIIEAQPGTSDDPLMNLGKVNSPYVSTTLQLAPGIPKNRPTNGHLLSPDNIWYEGMKFGDNSTLNYHFYGMHVDKTTPQEPVYRGADQAYLADAISGLSPLERTHFHELHNYKLEWMPGKGGYLRWYIDDVEVLGIDGHTVEKHGTQVRSQCNF 495
+GRG+TEIDIIEA PG PL N PYVST+LQ+APG+ +RP NG WY G+++G NS+LN +FYG +D+T+ E R Q++ ADAIS +S + +HF LH Y++EWMPGK GYLRWYIDD + I+G +++ G+++ + ++
Sbjct: 31 QGRGATEIDIIEAMPGFDTSPLPNTNTTR-PYVSTSLQIAPGVADHRPFNGAKPFGKQKWYHGLEYGRNSSLNVYFYGTLMDETSKYEVASRVKSQSFQADAISAISGVTESHFDSLHKYRVEWMPGKEGYLRWYIDDEMIHSINGTSLKLMGSKIPEEPSY 191
BLAST of mRNA_H-paniculata_contig21061.5506.1 vs. uniprot
Match: W7TCX4_9STRA (Beta-glucan synthesis-associated, SKN1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCX4_9STRA) HSP 1 Score: 139 bits (350), Expect = 2.860e-36 Identity = 68/144 (47.22%), Postives = 92/144 (63.89%), Query Frame = 1
Query: 4 ENKGRGSTEIDIIEAQPGTSDDPLM--NLGKVNSPYVSTTLQLAPGIPKNRPTNGHLLSPDN---IWYEGMKFGDNSTLNYHFYGMHVDKTTPQEPVYRGADQAYLADAISGLSPLERTHFHELHNYKLEWMPGKGGYLRWYID 420
+N+GRG+TEIDI+EA G +LG V PY+S+TLQ++PG+ KNRP G + WY+G++FG+ S +N +FYG +DKT EP R Q Y ADA+S L+ L TH+ + H Y+LEWMPG GYL WY+D
Sbjct: 14 QNQGRGATEIDIMEAMSGKPHKVTKKGDLG-VGVPYMSSTLQVSPGVEKNRPQAGKNFTEHQEEWTWYDGLRFGEKSKMNMYFYGTLLDKTQKDEPAGRSIHQVYQADAVSALTSLSATHWEDFHTYRLEWMPGPEGYLAWYLD 156
BLAST of mRNA_H-paniculata_contig21061.5506.1 vs. uniprot
Match: A0A4D9CTT0_9STRA (GH16 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTT0_9STRA) HSP 1 Score: 140 bits (353), Expect = 4.420e-36 Identity = 69/144 (47.92%), Postives = 92/144 (63.89%), Query Frame = 1
Query: 4 ENKGRGSTEIDIIEAQPGTSDDPLM--NLGKVNSPYVSTTLQLAPGIPKNRPTNGHLLSPDN---IWYEGMKFGDNSTLNYHFYGMHVDKTTPQEPVYRGADQAYLADAISGLSPLERTHFHELHNYKLEWMPGKGGYLRWYID 420
+NKGRG+TEIDI+EA G +LG V PY+S+TLQ++PG+ KNRP G + WY+G++FG+ S +N +FYG +DKT EP R Q Y ADA+S L+ L TH+ + H Y+LEWMPG GYL WY+D
Sbjct: 224 QNKGRGATEIDIMEAMSGKPHKVTKKGDLG-VGVPYMSSTLQVSPGVEKNRPQAGKNFTEHQEEWTWYDGLRFGEKSKMNMYFYGTLLDKTQKDEPAGRSIHQVYQADAVSALTSLSATHWDDFHTYRLEWMPGPEGYLAWYLD 366
BLAST of mRNA_H-paniculata_contig21061.5506.1 vs. uniprot
Match: A0A7S2W6G7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6G7_9STRA) HSP 1 Score: 130 bits (328), Expect = 3.300e-33 Identity = 68/158 (43.04%), Postives = 95/158 (60.13%), Query Frame = 1
Query: 7 NKGRGSTEIDIIEAQPGTSDDPLMNLGKVNSPYVSTTLQLAPGIPKNRPTNGHLLSPDNIWYEGMKFGDNSTLNYHFYGMHVDKTTPQEPVYRGADQAYLADAISGLSPLERTHFHELHNYKLEWM-----PGKGGYLRWYIDDVEVLGIDGHTVEKH 465
N GRG+ EIDI+EA PG+ PL +GK PY ST+LQ+APGI NRP G P +WYEGM++G NS++N FYG K + D Y +DA+SG + +++ + + H Y+LEW P + GY+RWY+DD + GI G T+ +H
Sbjct: 212 NSGRGAPEIDILEAMPGSGALPLSTVGK---PYFSTSLQIAPGIEVNRPQGGVWPGPG-MWYEGMEYGANSSMNIFFYGTRNVK--------KNQDYTYQSDALSGNTQMDKKKWEQWHTYRLEWETKESDPLREGYIRWYMDDELIYGIRGETLSQH 357
BLAST of mRNA_H-paniculata_contig21061.5506.1 vs. uniprot
Match: A0A1Z5KN53_FISSO (GH16 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KN53_FISSO) HSP 1 Score: 133 bits (335), Expect = 3.600e-33 Identity = 64/163 (39.26%), Postives = 95/163 (58.28%), Query Frame = 1
Query: 1 HENKGRGSTEIDIIEAQPGTSDDPLMNLGK-VNSPYVSTTLQLAPGIPKNRPTNGHLLSPDNI-------------WYEGMKFGDNSTLNYHFYGMHVDKTTPQEPVYRGADQAYLADAISGLSPLERTHFHELHNYKLEWMPGKGGYLRWYIDDVEVLGIDG 447
H N+GRG+TEIDI+E G+SD P+ V+ PY TLQ+APG+ KNRP +G L N+ WY+G+ + N+++N FYG ++ +T P EPV R QA+ ADA+ + L HF + H ++LEW PG+GG L W++ ++ +G
Sbjct: 217 HPNQGRGATEIDIVEVMTGSSDGPIPGTKPGVSYPYCDMTLQVAPGVTKNRPQSGALPKRKNVLSKNGHTEFLADTWYDGLMYAGNTSINPFFYGTYMAETKPNEPVSRTKKQAFQADAVGVVHELTPAHFEKPHTFRLEWQPGRGGRLDWFVKSYKIENENG 379
BLAST of mRNA_H-paniculata_contig21061.5506.1 vs. uniprot
Match: A0A448Z6K2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z6K2_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.840e-32 Identity = 66/152 (43.42%), Postives = 88/152 (57.89%), Query Frame = 1
Query: 1 HENKGRGSTEIDIIEAQPGTSDDPLMNLGK-VNSPYVSTTLQLAPGIPKNRP-------------TNGHLLSPDNIWYEGMKFGDNSTLNYHFYGMHVDKTTPQEPVYRGADQAYLADAISGLSPLERTHFHELHNYKLEWMPGKGGYLRWY 414
H +GRG+TEID+IE G SD PL V PY TLQ+APG+ KNRP NGH N WYEG++ N+T+N FYG ++ +T P EPV R +QA+ ADA+ L R HF +LH +++EW PG+GG + W+
Sbjct: 166 HAFQGRGATEIDLIEVMTGDSDGPLPGTDPPVGLPYGDMTLQVAPGVTKNRPQCCSVPLYESTVSANGHTEYLANTWYEGLEMHGNTTINPFFYGTYMGETKPGEPVTRTKEQAFQADAVGVAHQLTREHFRKLHTFRVEWQPGRGGRIDWF 317
BLAST of mRNA_H-paniculata_contig21061.5506.1 vs. uniprot
Match: A0A7S2W5Y4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W5Y4_9STRA) HSP 1 Score: 130 bits (328), Expect = 2.480e-32 Identity = 68/158 (43.04%), Postives = 95/158 (60.13%), Query Frame = 1
Query: 7 NKGRGSTEIDIIEAQPGTSDDPLMNLGKVNSPYVSTTLQLAPGIPKNRPTNGHLLSPDNIWYEGMKFGDNSTLNYHFYGMHVDKTTPQEPVYRGADQAYLADAISGLSPLERTHFHELHNYKLEWM-----PGKGGYLRWYIDDVEVLGIDGHTVEKH 465
N GRG+ EIDI+EA PG+ PL +GK PY ST+LQ+APGI NRP G P +WYEGM++G NS++N FYG K + D Y +DA+SG + +++ + + H Y+LEW P + GY+RWY+DD + GI G T+ +H
Sbjct: 212 NSGRGAPEIDILEAMPGSGALPLSTVGK---PYFSTSLQIAPGIEVNRPQGGVWPGPG-MWYEGMEYGANSSMNIFFYGTRNVK--------KNQDYTYQSDALSGNTQMDKKKWEQWHTYRLEWETKESDPLREGYIRWYMDDELIYGIRGETLSQH 357
BLAST of mRNA_H-paniculata_contig21061.5506.1 vs. uniprot
Match: A0A7S1BHS0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BHS0_9STRA) HSP 1 Score: 130 bits (327), Expect = 4.310e-32 Identity = 71/181 (39.23%), Postives = 100/181 (55.25%), Query Frame = 1
Query: 1 HENKGRGSTEIDIIEAQPGTSDDPLMNLGKVNSPYVSTTLQLAPGIPKNRPTNGHL-------------LSPDNIWYEGMKFGDNSTLNYHFYGMHVDKTTPQEPVYRGADQAYLADAISGLSPLERTHFHELHNYKLEWMPGKGGYLRWY------IDDVEVLGIDGHTVEKHGTQVRSQ 486
H+N+GRGSTEIDIIE+ G + +++PY TLQ APGI RPT GHL +S WYEG+ +G+ +++N +FYG ++ T P+EPV R QAY ADA++ + L HF + H ++LEW PG+ G + WY D I G+T+ H VR+Q
Sbjct: 238 HKNQGRGSTEIDIIESMSGKVGEIPETDPPISNPYADMTLQSAPGITVRRPTEGHLPARVETTGEYGYPMSLPQNWYEGLIYGNETSMNPYFYGTYLAPTKPEEPVQRSKKQAYQADALAAMFQLFPQHFRKTHKFRLEWQPGRDGRIDWYGQVPSKDDAAPPEWIHGYTI--HDEFVRNQ 416 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21061.5506.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig21061.5506.1 >prot_H-paniculata_contig21061.5506.1 ID=prot_H-paniculata_contig21061.5506.1|Name=mRNA_H-paniculata_contig21061.5506.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=166bp HENKGRGSTEIDIIEAQPGTSDDPLMNLGKVNSPYVSTTLQLAPGIPKNRback to top mRNA from alignment at H-paniculata_contig21061:274..3328+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig21061.5506.1 ID=mRNA_H-paniculata_contig21061.5506.1|Name=mRNA_H-paniculata_contig21061.5506.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3055bp|location=Sequence derived from alignment at H-paniculata_contig21061:274..3328+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig21061:274..3328+ >mRNA_H-paniculata_contig21061.5506.1 ID=mRNA_H-paniculata_contig21061.5506.1|Name=mRNA_H-paniculata_contig21061.5506.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=996bp|location=Sequence derived from alignment at H-paniculata_contig21061:274..3328+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |