mRNA_H-paniculata_contig21028.5491.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig21028.5491.1 vs. uniprot
Match: D7G107_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G107_ECTSI) HSP 1 Score: 82.8 bits (203), Expect = 5.600e-18 Identity = 37/66 (56.06%), Postives = 45/66 (68.18%), Query Frame = 1
Query: 7 DMVDNYLHAFCFLQRANRLAMADSTFSWWAAFLGRATEIHFPFGGKGSHLTSRLLVFDETRYVYRN 204
+MV++ HAFCFL RA RL MA STFSWW AFLG TE+HFP + +T + DE RYVYR+
Sbjct: 138 EMVEDQFHAFCFLSRAPRLVMAHSTFSWWVAFLGVGTEVHFPLTKQNKGVTGPSIAVDEGRYVYRD 203
BLAST of mRNA_H-paniculata_contig21028.5491.1 vs. uniprot
Match: D7G104_ECTSI (Alpha-1,2-fucosyltransferase, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G104_ECTSI) HSP 1 Score: 82.8 bits (203), Expect = 4.330e-17 Identity = 37/66 (56.06%), Postives = 45/66 (68.18%), Query Frame = 1
Query: 7 DMVDNYLHAFCFLQRANRLAMADSTFSWWAAFLGRATEIHFPFGGKGSHLTSRLLVFDETRYVYRN 204
+MV++ HAFCFL RA RL MA STFSWW AFLG TE+HFP + +T + DE RYVYR+
Sbjct: 305 EMVEDQFHAFCFLSRAPRLVMAHSTFSWWVAFLGVGTEVHFPLTRQNQGVTGPSIAVDEGRYVYRD 370
BLAST of mRNA_H-paniculata_contig21028.5491.1 vs. uniprot
Match: A0A349D2R7_9BACT (Uncharacterized protein n=1 Tax=Candidatus Peribacteria bacterium TaxID=2053688 RepID=A0A349D2R7_9BACT) HSP 1 Score: 58.9 bits (141), Expect = 1.330e-8 Identity = 30/61 (49.18%), Postives = 39/61 (63.93%), Query Frame = 1
Query: 25 LHAFCFLQRANRLAMADSTFSWWAAFLGRATEIHFPFGGKGSHLTSRL---LVFDETRYVY 198
L FCFL+ A ++A++ ST+SWWAA+L ATEI+FP G +SR L DE RY Y
Sbjct: 178 LEDFCFLKSAKKIALSQSTYSWWAAYLSDATEIYFPRSLTGPFSSSRPDIDLEVDEPRYRY 238
BLAST of mRNA_H-paniculata_contig21028.5491.1 vs. uniprot
Match: F2TVY1_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TVY1_SALR5) HSP 1 Score: 57.4 bits (137), Expect = 5.690e-8 Identity = 28/64 (43.75%), Postives = 40/64 (62.50%), Query Frame = 1
Query: 25 LHAFCFLQRANRLAMADSTFSWWAAFLGRATEIHFPFGG----KGSHLTSRLLVFDETRYVYRN 204
+H + F++ A RL M+ ST++WWAA+LG A E+H+P G KG T L DE RYV+ +
Sbjct: 447 MHDWLFMRSARRLVMSQSTYAWWAAWLGDAEEVHYPLAGDWWGKGPRHT--LYPVDEPRYVFHD 508
BLAST of mRNA_H-paniculata_contig21028.5491.1 vs. uniprot
Match: A0A382I3S7_9ZZZZ (Uncharacterized protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382I3S7_9ZZZZ) HSP 1 Score: 53.1 bits (126), Expect = 9.380e-7 Identity = 28/63 (44.44%), Postives = 37/63 (58.73%), Query Frame = 1
Query: 16 DNYLHAFCFLQRANRLAMADSTFSWWAAFLGRATEIHFPFGGKGSHLTSRLLVFDETRYVYRN 204
++ LH F FL A RL +A+STFSWWA +LG A I++P + L V +E RYV N
Sbjct: 138 EDTLHDFAFLASAKRLCIANSTFSWWAGWLGNAERIYYP--DMKIDYFNNLWVHNENRYVRIN 198
BLAST of mRNA_H-paniculata_contig21028.5491.1 vs. uniprot
Match: A0A8J2T2Q7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T2Q7_9STRA) HSP 1 Score: 53.1 bits (126), Expect = 1.500e-6 Identity = 26/57 (45.61%), Postives = 37/57 (64.91%), Query Frame = 1
Query: 34 FCFLQRANRLAMADSTFSWWAAFLGRATEIHFPFGGKGSHLTSRLLVFDETRYVYRN 204
F +L RA RL + +ST+SWWAA++G+ATE+H P G G+ DE RYV+ +
Sbjct: 164 FAYLARATRLVVTESTYSWWAAYVGQATEVHAP--GVGTVPVPA----DERRYVFHD 214
BLAST of mRNA_H-paniculata_contig21028.5491.1 vs. uniprot
Match: A0A2H0RNU4_9BACT (Uncharacterized protein n=1 Tax=Candidatus Peregrinibacteria bacterium CG10_big_fil_rev_8_21_14_0_10_55_24 TaxID=1974791 RepID=A0A2H0RNU4_9BACT) HSP 1 Score: 51.2 bits (121), Expect = 7.690e-6 Identity = 26/58 (44.83%), Postives = 33/58 (56.90%), Query Frame = 1
Query: 34 FCFLQRANRLAMADSTFSWWAAFLGRATEIHFPFGGKGSHLTSRL---LVFDETRYVY 198
FC + A ++A++ S+FSWWAAFL A I+FP G R L DE RYVY
Sbjct: 181 FCLMHSARQIAISQSSFSWWAAFLSHAETIYFPRSLTGPFSPERPDIDLEVDEPRYVY 238
BLAST of mRNA_H-paniculata_contig21028.5491.1 vs. uniprot
Match: A0A7S3JMN3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JMN3_9STRA) HSP 1 Score: 49.7 bits (117), Expect = 2.980e-5 Identity = 24/57 (42.11%), Postives = 32/57 (56.14%), Query Frame = 1
Query: 34 FCFLQRANRLAMADSTFSWWAAFLGRATEIHFPFGGKGSHLTSRLLVFDETRYVYRN 204
F +L A RL + +STFSWWAA L ATEIH P G + D+ R+V+ +
Sbjct: 451 FLYLAHATRLIICESTFSWWAAILSNATEIHAPASGMVP------VAIDDPRFVFHD 501
BLAST of mRNA_H-paniculata_contig21028.5491.1 vs. uniprot
Match: F0YD20_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YD20_AURAN) HSP 1 Score: 49.3 bits (116), Expect = 4.160e-5 Identity = 19/36 (52.78%), Postives = 26/36 (72.22%), Query Frame = 1
Query: 34 FCFLQRANRLAMADSTFSWWAAFLGRATEIHFPFGG 141
F ++ RA RL + +ST+SWWAA+LG A E+H P G
Sbjct: 368 FLYMTRAKRLVVTESTYSWWAAYLGAADEVHAPASG 403 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21028.5491.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig21028.5491.1 >prot_H-paniculata_contig21028.5491.1 ID=prot_H-paniculata_contig21028.5491.1|Name=mRNA_H-paniculata_contig21028.5491.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=65bp MVDNYLHAFCFLQRANRLAMADSTFSWWAAFLGRATEIHFPFGGKGSHLTback to top mRNA from alignment at H-paniculata_contig21028:2284..2487- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig21028.5491.1 ID=mRNA_H-paniculata_contig21028.5491.1|Name=mRNA_H-paniculata_contig21028.5491.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=204bp|location=Sequence derived from alignment at H-paniculata_contig21028:2284..2487- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig21028:2284..2487- >mRNA_H-paniculata_contig21028.5491.1 ID=mRNA_H-paniculata_contig21028.5491.1|Name=mRNA_H-paniculata_contig21028.5491.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=390bp|location=Sequence derived from alignment at H-paniculata_contig21028:2284..2487- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |