mRNA_H-paniculata_contig210.5479.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig210.5479.1 vs. uniprot
Match: A0A6H5L2J2_9PHAE (NFACT-R_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2J2_9PHAE) HSP 1 Score: 698 bits (1802), Expect = 1.860e-239 Identity = 399/696 (57.33%), Postives = 475/696 (68.25%), Query Frame = 2
Query: 776 MSRELAQTVVPSRVENAYQLDPYNLAIGLRTLEGNMWLHVCWHPQGARCHVGAPPPREKEQKAYTFSQTLRSLIRGLNIVKVGLARPFERVVTLDLSTRLDEPPSYRIYVEIMASRSNVVLVAVD-ADGAETVAACAYQISPNKSVRPLST-------------GQSYELPPVLVARR-PTLEESLEDFTEGVGRVPTVQLKKALVGVYQGTSPALVNTMASCVPDLSPSVKVGELTPEQWNALYSGPWKRWLELVGDGTTTTAAADSGSTSPPVSSTREGSSISPQATTAWLSKDGLSYYPTKLGGS-GTXXXXXXXXEGREEDEASGFSSTALQRVMERYYRGTQSTEEFDELKRRCVARISATLAKLREREVEFERQVAAAQDDQVAELNRRGDLLVTYGHAWVQGETHVKCVDFDTGENIDIQISAADKTPVEEAQQAFKQGKKLKRSMVVVRELLDQVKTQILYAEGIEMALEQLRGGGSTTIPAPTSTTAYESGTAAAATASREELSVLRGISEELGLQGDRESTRKFAGVFGVKQAQVSNRGGGGGSGRMVGGNRRKGKSKGGTSKAGEGR------------------------VCIEGGGGGEEGSLVGLLELRRPAPGSPAVLVGRNNLQNDRITFSVARAHELWFHARGVAGAHVLLRLEPGQAGEDEDVQFAADIAVYFSKARQ 2743
MSREL Q++VP+RVENAYQ+D +NLA+ LRTLEGN+WLHV WHP+GARCHVG PREKEQKAYTFSQTLRS IRGLNI+ VGLARP ERVV LDL+ RLD P ++R+YVEIMASRSNVVLVAVD A G+ET+AACAYQ+SP+KSVRPLST GQ+Y LPP + ARR P EE EDF E VGRVPT QLKKALV VYQG SP LV MAS VP L+ + KVGE++PEQW+AL+ GPWKRWL ++GDG A +G+ + + + S T W+S+DG SYYPT LG G + + F L++VME+YYRGTQS EEFD LKRRC++R++ATLAKLRER EFE Q+AAAQ+++V+ELNRRGDLL+TYG+AW G+THV C DFDTGE + I+I +KTP++ AQ+AFK GKKLKRS VV+ELLD+ QILYAEGIEMALEQLRGG E+GTA+ SREELSVLRG++EELG+ G ++ R FA FGVKQ Q GGT+ G G+ GLLELRR PG+PAVLVGRNN QN+RITFS+ARAHELW HARGVAGAHVLLRL+PGQ ED+D+ FAAD+A +FSKARQ
Sbjct: 1 MSRELEQSIVPARVENAYQMDAHNLALQLRTLEGNIWLHVSWHPKGARCHVGGDVPREKEQKAYTFSQTLRSQIRGLNIISVGLARPMERVVRLDLAPRLDTPATFRLYVEIMASRSNVVLVAVDEASGSETIAACAYQVSPSKSVRPLSTERLADLSVLPPLAGQAYVLPPAMTARRRPRPEEPFEDFVEAVGRVPTQQLKKALVAVYQGLSPMLVTVMASRVPGLTAATKVGEVSPEQWSALFDGPWKRWLRVIGDG----GDAAAGAAGMADGNEPDDDAASNVPTKPWISEDGASYYPTTLGEQDGDDDGASDAAAAEQGGRSKVFGLARLEKVMEKYYRGTQSNEEFDGLKRRCLSRVTATLAKLRERAAEFEDQLAAAQENKVSELNRRGDLLMTYGYAWEYGQTHVHCEDFDTGEPVSIEIPR-EKTPIDVAQEAFKLGKKLKRSAAVVKELLDRANAQILYAEGIEMALEQLRGG--------------EAGTAS----SREELSVLRGVAEELGILGGADAARSFASTFGVKQVQ-----------------------SGGTTNDGSGKRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPTAGLLELRRE-PGAPAVLVGRNNQQNERITFSLARAHELWLHARGVAGAHVLLRLDPGQEVEDDDLAFAADVAAFFSKARQ 649
BLAST of mRNA_H-paniculata_contig210.5479.1 vs. uniprot
Match: D8LSX7_ECTSI (NFACT-R_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSX7_ECTSI) HSP 1 Score: 687 bits (1773), Expect = 2.810e-235 Identity = 388/663 (58.52%), Postives = 460/663 (69.38%), Query Frame = 2
Query: 827 YQLDPYNLAIGLRTLEGNMWLHVCWHPQGARCHVGAPPPREKEQKAYTFSQTLRSLIRGLNIVKVGLARPFERVVTLDLSTRLDEPPSYRIYVEIMASRSNVVLVAVD-ADGAETVAACAYQISPNKSVRPLSTGQSYELPPVLVARR-PTLEESLEDFTEGVGRVPTVQLKKALVGVYQGTSPALVNTMASCVPDLSPSVKVGELTPEQWNALYSGPWKRWLELVGDGTTTTAAADSGSTSPPVSSTREGSSISPQATTAWLSKDGLSYYPTKLG-GSGTXXXXXXXXEGREEDEASGFSSTALQRVMERYYRGTQSTEEFDELKRRCVARISATLAKLREREVEFERQVAAAQDDQVAELNRRGDLLVTYGHAWVQGETHVKCVDFDTGENIDIQISAADKTPVEEAQQAFKQGKKLKRSMVVVRELLDQVKTQILYAEGIEMALEQLRGGGSTTIPAPTSTTAYESGTAAAATASREELSVLRGISEELGLQGDRESTRKFAGVFGVKQAQVSNRGGGGGSGRMVGGNRRKGKSKGGTSKAGEGR---------------------VCIEGGGGGEEGSLVGLLELRRPAPGSPAVLVGRNNLQNDRITFSVARAHELWFHARGVAGAHVLLRLEPGQAGEDEDVQFAADIAVYFSKARQ 2743
+++D +N+A+ LRTLEGNMWLHV WHP+GARCHVG PREKEQKAYTFSQTLRS I GLNIV VGLARP ERVV LDL+ RLD P ++R+YVEIMASRSNVVLVAVD A G+ET+AACAYQ+SP+KSVRPLSTGQ+YELPP + ARR P EE EDF E VGRVPT QLKKALV VYQG SP LV MAS VP L+ + KVGE++PEQW+AL+ GPWKRWL ++GDG A +G+ + + G + S T W+S+DG SYYPT LG G G + + FS L+++ME+YYRGTQS EEFD LKRRC++R++ATLAKLRER EFE Q AAAQ+D+V+ELNRRGDLL+TYG+ W G+THV C DFDTGE + I+I DKTP++ AQ+AFK GKKLKRS VV+ELLD+ QILYAEGIEMALEQLRGG GTA+ SREELSVLRG++EELG+ G ++ R FA FGVKQ Q GGT+ G G+ G +E GLLELRR PG+PAVLVGRNN QN+RITFS+AR HELW HARGVAGAHVLLRL+PGQ ED+D+ FAAD+A +FSKARQ
Sbjct: 29 HEMDAHNVALQLRTLEGNMWLHVSWHPKGARCHVGGDVPREKEQKAYTFSQTLRSQIWGLNIVSVGLARPMERVVRLDLAPRLDTPSTFRLYVEIMASRSNVVLVAVDEASGSETIAACAYQVSPSKSVRPLSTGQAYELPPAMTARRRPRPEEPFEDFVEAVGRVPTQQLKKALVAVYQGLSPMLVTVMASRVPGLTAATKVGEVSPEQWSALFDGPWKRWLRVIGDG----GDAAAGAAAVADGAGAGGDAASNVPTKPWISEDGASYYPTTLGEGEGDDDGAADVAAAGQGGRSKVFSLARLEKIMEKYYRGTQSNEEFDGLKRRCLSRVTATLAKLRERAAEFEDQQAAAQEDKVSELNRRGDLLMTYGYDWEYGQTHVHCEDFDTGEPVSIEIPR-DKTPIDVAQEAFKLGKKLKRSAAVVKELLDRANAQILYAEGIEMALEQLRGGNP--------------GTAS----SREELSVLRGVAEELGILGGADAARSFASAFGVKQVQ-----------------------SGGTTNDGSGKRGXXXXXXXXXAXXXXXXXXXXXXXXXXGKKEAPTAGLLELRRE-PGAPAVLVGRNNQQNERITFSLARGHELWLHARGVAGAHVLLRLDPGQEVEDDDLAFAADVAAFFSKARQ 644
BLAST of mRNA_H-paniculata_contig210.5479.1 vs. uniprot
Match: A0A0G4ENT6_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ENT6_VITBC) HSP 1 Score: 361 bits (927), Expect = 5.840e-109 Identity = 239/673 (35.51%), Postives = 358/673 (53.19%), Query Frame = 2
Query: 734 KRKLQSVDFTTALVMSRELAQTVVPSRVENAYQLDPYNLAIGLRTLEGNMWLHVCWHPQGARCHVGAPPPREKEQKAYTFSQTLRSLIRGLNIVKVGLARPFERVVTLDLSTRLDEPPSYRIYVEIMASRSNVVLVAVDADGAETVAACAYQISPNKSVRPLSTGQSYELPPVLVARRPTLEESLEDFTEGVGRVPTVQLKKALVGVYQGTSPALVNTMASCVPDLSPSVKVGELTPEQWNALYSGPWKRWLELVGDGTTTTAAADSGSTSPPVSSTREGSSISPQATTAWLSKDGLSYYPTKLGGSGTXXXXXXXXEGREEDEASGFSSTALQRVMERYYRGTQSTEEFDELKRRCVARISATLAKLREREVEFERQVAAAQDDQVAELNRRGDLLVTYGHAWVQGETHVKCVDFDTGENIDIQISAADKTPVEEAQQAFKQGKKLKRSMVVVRELLDQVKTQILYAEGIEMALEQLRGGGSTTIPAPTSTTAYESGTAAAATASREELSVLRGISEELGLQGDRESTRKFAGVFGVKQAQVSNRGGGGGSGRMVGGNRRKGKSKGGTSKAGEGRVCIEGGGGGEEGSLVGLLELRRPAPGS---PAVLV-GRNNLQNDRITFSVARAHELWFHARGVAGAHVLLRLEPGQAGEDEDVQFAADIAVYFSKAR 2740
K K Q+VDFTT L+ REL ++VPS V +A+QLD NL +GL TL G WLH+CW + AR +G PP+ KE ++FS +R ++GL + + L +PF R+V + + RL P ++++VE+ RSNV+LV+ D + ++AACAYQ+ ++SVRPL TGQ Y+LPP R P+LEE+ + F + VP + L+KA + Y+G SPAL+ MA V L + ++ +LY GPWKRWL+LV +S T +S+ P + LSY L + + E S + ++Q ++ YY G ++ +D+LK RC + + L K +R FE+Q+A+A + +V L +RGDLL+ Y H W G++ + C DF+T E++ I I DKTP+E AQ A+K+ KL+RS+ V LD+ + + Y + IE A+E L A ++ +L+ I+EELG+ G + + G KQA+ + RG KGK+ A G+V + S+ GLL + P G+ PAV++ GRNN QNDR+TF +AR E+W HA+G+ G+H +LR +A DVQFAA +A Y SK +
Sbjct: 76 KAKKQTVDFTTLLLSCRELNASLVPSSVSSAFQLDDSNLLLGLTTLSGTRWLHLCWDAKAARLALGENPPK-KEILPFSFSHNIRLALKGLTLTAISLPQPFNRIVEMTFAPRLGRDPFFKLFVEVQGPRSNVILVSADTN---SIAACAYQVGASRSVRPLQTGQLYQLPPAQSGRLPSLEETWDVFHRRLSVVPEMSLQKAFIDSYRGLSPALIIEMA-LVAGLDAQTPIKDIPEASLRSLYEGPWKRWLQLV------------------LSDTENPASVQPALRIGGEGQR-LSYAVLGL-------LPAIDADAADTSEPSWVKAKSMQELLRIYY-GEHGSKRWDDLKTRCDRAVKSRLQKSEQRVQLFEKQLASADESEVERLRKRGDLLMAYQHEWAAGDSELICEDFETHESVSIPIPP-DKTPLELAQAAYKRSGKLQRSIAAVMPQLDKARDDLQYLQSIETAIEDL-----------------------AQYRRDSDIKLLQEIAEELGIYGSETNEARKKPAKG-KQAKGARRG--------------KGKA------AAAGKV--------HKASMKGLLVIDCPREGTNDTPAVVIAGRNNRQNDRLTFDIARNSEMWLHAQGLPGSHCILRGPSSEA----DVQFAAHVAAYLSKGK 659
BLAST of mRNA_H-paniculata_contig210.5479.1 vs. uniprot
Match: W7TLK7_9STRA (Fibronectin-binding a domain protein n=4 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TLK7_9STRA) HSP 1 Score: 283 bits (724), Expect = 2.150e-79 Identity = 218/711 (30.66%), Postives = 352/711 (49.51%), Query Frame = 2
Query: 740 KLQSVDFTTALVMSRELAQTVVPSRVENAYQLDPYNLAIGLRTLEGNMWLHVCWHPQGARCHVGAPPPREKEQKA-------------------YTFSQTLRSLIRGLNIVKVGLARPFERVVTLDLSTRLD-EPPSYRIYVEIMASRSNVVLVAVDADGAETVAACAYQISPNKSVRPLSTGQSYELPPVLVARRPT--------LEESLEDFTEGVGRVPTVQLKKALVGVYQGTSPALVNTMASCVPDLSPSVK-VGELTPEQWNALYSGPWKRWLELVGDGTTTTAAADSGSTSPPVSSTREGSSISPQATTAWLSKDGLSYYPTKLGGSGTXXXXXXXXEGREEDEASGFSST-ALQRVMERYYRGTQSTEEFDELKRRCVARISATLAKLREREVEFERQVAAAQDDQVAELNRRGDLLVTYGHAWVQGETHVKCVDFDTGENIDIQISAADKTPVEEAQQAFKQGKKLKRSMVVVRELLDQVKTQILYAEGIEMALEQLRGGGSTTIPAPTSTTAYESGTAAAATASREELSVLRGISEELG---LQGDRESTRKF-------AGVFGVKQAQVSNRGGGGGSGRMVGGNRRKGKSKGGTSKAGEG-RVCIEGGGGGEEGSLVGLLELRRPAPGSPA---VLVGRNNLQNDRITFSVARAHELWFHARGVAGAHVLLRLEPGQAGEDEDVQFAADIAVYFSKAR 2740
+LQ++D+TT +++ EL + ++P RVEN Q D ++L + +R ++ W+ +CW P+ AR + P + + + Y+ L+ ++ ++ V L P ER++ + + RL P++++ +E+M RSNV+LV D D V AC YQ+SP KSVRP+S GQ Y PP L A P +E +F G+ VP+ L KAL+ Y+G SP LV+ M S V + S VG L+ + + GP W+ L+ D P V +T E LS DG Y P +G+ ++ +++E YY +E +L+RR + R+ A +L+ EF+RQ+ AA +++V++L + +LL TY ++W QG+T C D DTGE I I + + + +EAQ + + +KLKRS+ + LL ++ ++ Y + +E +++QL + P + T + ++L+++R I+EELG L G S+ F V G++Q+ +SN + + K+K K+ +G + C + + + R P+ S + V VGRN+ QND +TF +AR HELWFHA+GV GAH L+R++PG D D+QFAAD+A YFSKAR
Sbjct: 59 RLQTLDYTTLALVACELRERLLPGRVENVIQQDDFSLLLQMRCVDDFTWMLICWQPEAARVCLQRNGPNDSNRNSRGDGQSKRRGGGNGVSSTLYSLPGQLKGFLQLKTLINVTLPIPGERIMVFEFADRLTVSVPTHKLVIEVMGRRSNVMLVDGDTD---IVLACGYQVSPLKSVRPVSIGQRYTYPPPLTAPLPPPLPEDQADMEAYESEFIRGITLVPSHSLPKALISAYRGFSPQLVDVMGSTVGIRNASTTPVGNLSRDVLVRFFRGPVVMWVRLI-------VMRD-----PRVVATSE----------CGLSLDGKRYTPLLF------------------HPGNGWQPVPSVLKLVEVYYTAFLKRQELRDLQRRGLNRVQAVQHRLQRTRQEFQRQLDAAAEEEVSKLQTKAELLTTYAYSWKQGDTECVCPDLDTGEEICIPLKPGN-SAADEAQATYGRIRKLKRSVDAIMPLLQKIDVKVAYVDELESSIQQLGTSARSDEDTPN---VLNTRTLS------QDLAIMREIAEELGINCLDGRGGSSTTFFSTILNRLSVPGIEQSSLSNYQNSKNNKXXXKDKPVRDKNKKIQGKSTDGAKKCAQ---------SMAIQSFRPPSVHSTSNVVVYVGRNSKQNDYVTFQLARDHELWFHAQGVPGAHCLMRIDPGVEVSDADMQFAADLAAYFSKAR 707
BLAST of mRNA_H-paniculata_contig210.5479.1 vs. uniprot
Match: A0A0M2Q4I6_PROHO (Rqc2 homolog RqcH n=1 Tax=Prochlorothrix hollandica PCC 9006 = CALU 1027 TaxID=317619 RepID=A0A0M2Q4I6_PROHO) HSP 1 Score: 278 bits (711), Expect = 2.790e-79 Identity = 215/668 (32.19%), Postives = 307/668 (45.96%), Query Frame = 2
Query: 743 LQSVDFTTALVMSRELAQTVVPSRVENAYQLDPYNLAIGLRTLEGNMWLHVCWHPQGARCHVGAPPPREKEQKAYTFSQTLRSLIRGLNIVKVGLARPFERVVTLDLSTRLDEPPSYRIYVEIMASRSNVVLVAVDADGAETVAACAYQISPNKS-VRPLSTGQSYELPPVLVARRPTLEESLEDFTEGVGRVPTVQLKKALVGVYQGTSPALVNTMASCVPDLSPSVKVGELTPEQWNALYSGPWKRWLELVGDGTTTTAAADSGSTSPPVSSTREGSSISPQATTAWLSKDGLSYYPTKLGGSGTXXXXXXXXEGREEDEASGFSSTALQRVMERYYRGTQSTEEFDELKRRCVARISATLAKLREREVEFERQVAAAQDDQVAELNRRGDLLVTYGHAWVQGETHVKCVDFDTGENIDIQISAADKTPVEEAQQAFKQGKKLKRSMVVVRELLDQVKTQILYAEGIEMALEQLRGGGSTTIPAPTSTTAYESGTAAAATASREELSVLRGISEELGLQGDRESTRKFAGVFGVKQAQVSNRGGGGGSGRMVGGNRRKGKSKGGTSKAGEGRVCIEGGGGGEEGSLVGLLELRRPAPGSPAVLVGRNNLQNDRITFSVARAHELWFHARGVAGAHVLLRLEPGQAGEDEDVQFAADIAVYFSKARQ 2743
+Q VDFTT + L Q +P+RVE YQ D + LA+GLRTL+G WL +CWHPQGAR H+G PPR+ + +TFS+ + S I+GL + ++ L P+ERVV L + R DEP + +Y+E+M SN +LV D + + + A+Q+S +S +RP+ TGQ Y LPP+ P +ESLE + V VP L K L Y+G S AL + L P L+P QW AL++ W+RWL+ + E S P W + Y T +GG D G + ++ +YY +L+ + R+ L K + F ++ Q D + +GDL++ + H W G + +DF TGE I + KT V+ AQ +K+ +KLKR+ + V LL V ++ Y E +E L++L GG+ + LR + EEL L+G GT + G+ R I G S R P V VGRNN QND +TF VA A++LWFHA+ + G+HVLLRLEPGQ E ED+ +AAD+A Y S+ARQ
Sbjct: 1 MQPVDFTTLVASCAALRQGWLPARVEQVYQCDRHTLALGLRTLQGRGWLTLCWHPQGARLHLGDSPPRDPD--TFTFSKQVLSQIKGLALSQIALVAPWERVVDLQFAPRPDEPAHWHLYLEVMGKYSNALLVNAD----DRIVSVAHQVSSGQSRIRPIQTGQPYPLPPLPPGSIPRRDESLEQWQAQVNLVPG-PLAKVLRQSYRGLSSALAQELVQGA-GLDPQCPSDRLSPPQWQALFT-QWQRWLQAL-----------------------EQESFRP----GWTA---TGY--TVIGG----------------DPPQGLDQ--VHPLLHQYYGQHLRRHHIQQLQHQLGQRVRIALTKANHKAAGFRDRLQ--QSDGADDHRHQGDLIMAHLHHWQPGLQQLPVLDFATGEQRLIPLEPT-KTAVQLAQGLYKKHQKLKRARLAVEPLLATVDQEVRYLEQVEETLQELGSGGT-----------------------EADWLALREVQEELYLEGY------------------------------------------GTGQRGDDRPLIRKKGKVSRRSQTDFYRYRSPQ--GLEVWVGRNNHQNDDLTFRVATAYDLWFHAQEIPGSHVLLRLEPGQVPEAEDLAYAADVASYHSRARQ 539
BLAST of mRNA_H-paniculata_contig210.5479.1 vs. uniprot
Match: A0A7C3VUB6_9CYAN (Rqc2 homolog RqcH n=2 Tax=Oscillatoriales TaxID=1150 RepID=A0A7C3VUB6_9CYAN) HSP 1 Score: 278 bits (710), Expect = 3.970e-79 Identity = 212/672 (31.55%), Postives = 318/672 (47.32%), Query Frame = 2
Query: 743 LQSVDFTTALVMSRELAQTVVPSRVENAYQLDPYNLAIGLRTLEGNMWLHVCWHPQGARCHVGAPPPREKEQKAYTFSQTLRSLIRGLNIVKVGLARPFERVVTLDLSTRLDEPPSYRIYVEIMASRSNVVLVAVDADGAETVAACAYQISPNKS-VRPLSTGQSYELPPVLVARRPTLEESLEDFTEGVGRVPTVQLKKALVGVYQGTSPALVNTMASCVPDLSPSVKVGELTPEQWNALYSGPWKRWLELVGDGTTTTAAADSGSTSPPVSSTREGSSISPQATTAWLSKDGLSYYPTKLGGSGTXXXXXXXXEGREEDEASGFSSTALQRVMERYYRGTQSTEEFDELKRRCVARISATLAKLREREVEFERQVAAAQDDQVAELNRR-GDLLVTYGHAWVQGETHVKCVDFDTGENIDIQISAADKTPVEEAQQAFKQGKKLKRSMVVVRELLDQVKTQILYAEGIEMALEQLRGGGSTTIPAPTSTTAYESGTAAAATASREELSVLRGISEELGLQGDRESTRKFAGVFGVKQAQVSNRGGGGGSGRMVGGNRRKGKSKGGTSKAGEGRVCIEGGGGGEEGSLVGLLEL---RRPAPGSPAVLVGRNNLQNDRITFSVARAHELWFHARGVAGAHVLLRLEPGQAGEDEDVQFAADIAVYFSKARQ 2743
+Q VDFTT EL V+P+R+E YQ D + + + LRTL G WL + WHPQGAR + PPPR + +TFS LR + GL +V + +P+ER L + R EP + +Y EIM RSN +L D + CA+Q+S +S VRP+ TGQ YELPP L P+L ES E + E V +P ++ K L+ Y+G S ALVN+M + P ELT QW L+ W RWL+ + AA G S I P AW +DG Y GG SG + ++Q +++RYY + EEF +L++ + ++S L KLR++ + ++ Q+ + A+ +R DLL+ + + W G ++ DF+TG+ + + ++ +K V+ AQ +K +KLKR+ + LL +V T+I Y E +E+A+ Q+ R ++ L LQ R+ +++ QV + GG + G L E R +P +LVGRNN QND ++F +A ++LWFH + +AG+HVLLRL PG +D D+Q AAD+ Y+S+ARQ
Sbjct: 1 MQQVDFTTLTAACGELRAQVLPARLEQVYQRDRHTVNLALRTLTGRCWLALSWHPQGARLCLCDPPPRTPD--TFTFSDQLRHQLGGLALVAIEPVQPWERAFDLQFARRPGEPIVWHLYAEIMGKRSNAILANQD----NIIITCAHQVSEKQSSVRPVQTGQPYELPPALTDPAPSLAESYERWQERVSLIPG-KVGKRLLSSYRGLSSALVNSMVVAA-GIDPETSTLELTEAQWQGLFQ-EWLRWLQAL-------AALGQGDLS----------HIKP----AW--RDGG--YTVLYGGD------------------SGNQAISVQELLDRYYSAKLNHEEFQQLRQALMQKLSRLLGKLRQKAAGWTERL---QESEGADRHRLLADLLMAHLYMWEPGMKSIQLPDFETGDPVTVPLNP-EKNAVQNAQSLYKLHQKLKRARTAIEPLLAEVVTEIHYLEQVEVAVTQI--------------------------------DTYREEADLLALQEIRQEL--------MQEGQVDS-------------------------------------GGSKPGGLKPNSEADFHRYQSPSGFELLVGRNNRQNDLLSFRIAGDYDLWFHTQEIAGSHVLLRLNPGAVADDRDLQLAADLTAYYSRARQ 539
BLAST of mRNA_H-paniculata_contig210.5479.1 vs. uniprot
Match: A0A846A464_9CYAN (Rqc2 homolog RqcH n=1 Tax=Leptolyngbya sp. SIO4C5 TaxID=2607774 RepID=A0A846A464_9CYAN) HSP 1 Score: 275 bits (702), Expect = 5.570e-78 Identity = 205/669 (30.64%), Postives = 307/669 (45.89%), Query Frame = 2
Query: 743 LQSVDFTTALVMSRELAQTVVPSRVENAYQLDPYNLAIGLRTLEGNMWLHVCWHPQGARCHVGAPPPREKEQKAYTFSQTLRSLIRGLNIVKVGLARPFERVVTLDLSTRLDEPPSYRIYVEIMASRSNVVLVAVDADGAETVAACAYQISPNKS-VRPLSTGQSYELPPVLVARRPTLEESLEDFTEGVGRVPTVQLKKALVGVYQGTSPALVNTMASCVPDLSPSVKVGELTPEQWNALYSGPWKRWLELVGDGTTTTAAADSGSTSPPVSSTREGSSISPQATTAWLSKDGLSYY-PTKLGGSGTXXXXXXXXEGREEDEASGFSSTALQRVMERYYRGTQSTEEFDELKRRCVARISATLAKLREREVEFERQVAAAQDDQVAELNRRGDLLVTYGHAWVQGETHVKCVDFDTGENIDIQISAADKTPVEEAQQAFKQGKKLKRSMVVVRELLDQVKTQILYAEGIEMALEQLRGGGSTTIPAPTSTTAYESGTAAAATASREELSVLRGISEELGLQGDRESTRKFAGVFGVKQAQVSNRGGGGGSGRMVGGNRRKGKSKGGTSKAGEGRVCIEGGGGGEEGSLVGLLELRRPAPGSPAVLVGRNNLQNDRITFSVARAHELWFHARGVAGAHVLLRLEPGQAGEDEDVQFAADIAVYFSKARQ 2743
+Q VDFTT + + EL +PSR E YQ D Y + I LRTL+ WL + WHPQ AR H+ APPPR + +TFSQ L+ + GL +V++ P+ERV+ L + R +P + +Y EIM SNV+L + + + A+Q+S ++S VRP+ TG Y+ PP + P+L+ES D+ E + +P LKK ++ VY G S ALV ++ DLSPS L W L+ W+RWL + G P T + GL P + G Q ++++YY + + F +L R + ++ L KLR++E F ++ Q DQ + ++ DLL+ Y + W G ++ DF+TGE + I+++ +K ++ AQ +KQ +KLKR+ V LL +V++++ Y E +E AL L T +L L+ I EEL QG + AQ G + S R P VLVGRNN QND++TFS A ++LWFH + + G+HVLLRLEPG ++ D+Q+ A++A YFS+ARQ
Sbjct: 1 MQPVDFTTLMAVCSELRSQWLPSRCEQVYQRDRYTVCIALRTLKRRGWLTLAWHPQAARIHIDAPPPRLPD--TFTFSQQLKHQLGGLALVQIEAIAPWERVLDLQFAQRPGDPVQWHLYAEIMGKYSNVILTTAN----QQIVTAAHQVSESQSSVRPIQTGDIYQPPPAITDPLPSLDESQADWQERISLIPG-GLKKMMMQVYGGLSSALVRSLIEAA-DLSPSQSTETLNASDWQRLFQA-WQRWLRQLQSG-----------------------EFQPGWTETGYTVTGLGLIEPVETG----------------------------QSLLQQYYTYELNLQLFKQLHHRMIQKLQNLLKKLRQKEATFLTRLE--QSDQADQQRQQADLLMAYAYQWQPGMQSMELADFETGEPVKIKLNP-EKNAIQNAQALYKQHQKLKRARRAVEPLLAEVRSEMNYLEQVEAALLHLDRYQETA-----------------------DLQALQEIYEELIAQG-----------YLSDPAQRE----------------------------------------GSQRSPEQTEFHRYRTPSGFEVLVGRNNRQNDKLTFSTATDYDLWFHTQEIPGSHVLLRLEPGAVPDEADLQYTANLAAYFSRARQ 532
BLAST of mRNA_H-paniculata_contig210.5479.1 vs. uniprot
Match: B0JJ07_MICAN (Rqc2 homolog RqcH n=79 Tax=Chroococcales TaxID=1118 RepID=B0JJ07_MICAN) HSP 1 Score: 273 bits (698), Expect = 1.570e-77 Identity = 204/668 (30.54%), Postives = 317/668 (47.46%), Query Frame = 2
Query: 743 LQSVDFTTALVMSRELAQTVVPSRVENAYQLDPYNLAIGLRTLEGNMWLHVCWHPQGARCHVGAPPPREKEQKAYTFSQTLRSLIRGLNIVKVGLARPFERVVTLDLSTRLDEPPSYRIYVEIMASRSNVVLVAVDADGAETVAACAYQISPNKS-VRPLSTGQSYELPPVLVARRPTLEESLEDFTEGVGRVPTVQLKKALVGVYQGTSPALVNTMASCVPDLSPSVKVGELTPEQWNALYSGPWKRWLELVGDGTTTTAAADSGSTSPPVSSTREGSSISPQATTAWLSKDGLSYYPTKLGGSGTXXXXXXXXEGREEDEASGFSSTALQRVMERYYRGTQSTEEFDELKRRCVARISATLAKLREREVEFERQVA-AAQDDQVAELNRRGDLLVTYGHAWVQGETHVKCVDFDTGENIDIQISAADKTPVEEAQQAFKQGKKLKRSMVVVRELLDQVKTQILYAEGIEMALEQLRGGGSTTIPAPTSTTAYESGTAAAATASREELSVLRGISEELGLQGDRESTRKFAGVFGVKQAQVSNRGGGGGSGRMVGGNRRKGKSKGGTSKAGEGRVCIEGGGGGEEGSLVGLLELRRPAPGSPAVLVGRNNLQNDRITFSVARAHELWFHARGVAGAHVLLRLEPGQAGEDEDVQFAADIAVYFSKAR 2740
+QSVDFTT E+A T +P+R+E YQ+D +A+ LRT + WL + WHPQGAR H+G PPP+ + +TFS LR + GL + K+ P+ERV+ L + R D+P +Y+EIM SNV+L A D + A+Q++ +S VR + TGQ Y+LPPVL+A P+LEESL + V +P ++K LV Y+G SP + ++ +++P + +L W L+S W+ WL+++ + T TREG ++ +GG ++ +Q ++ RYY + E F +L+++ ++ + L KL+ + F+ ++A +A D+ E +GDLL+ QG T + DF TG + I + ++ PV+ AQ +KQ +KLKR+ + V LL++V ++I Y E + +L QL S+ E+L L I EEL Q ES ++ + +N K E +R P + +GRNN QNDR+TF A +++WFH++ +AG+HVLLRL PG E D+QFAAD A Y+S+AR
Sbjct: 1 MQSVDFTTLSATCAEIAATWLPARLEQVYQIDRQTIALYLRTFDRKGWLIISWHPQGARLHIGDPPPKVPD--TFTFSDQLRHQLNGLALTKLAFVAPWERVIDLQFAQRPDDPALGHLYIEIMGKYSNVILTAAD----NQIVTVAHQVNATQSSVRTVQTGQIYQLPPVLLATNPSLEESLSSWQARVSLIPKT-IEKQLVSTYRGVSPVIARSLLQKA-NINPKLNTDQLDNTDWEKLFS-VWQEWLKILENNTFQPGW------------TREGYTV--------------------IGGEILA------------------AAKNVQELLNRYYSDQINQESFRQLQQKLNQKVISLLTKLQTKAAGFQTRLAESAHADRYKE---QGDLLMANLQQIQQGMTSISLADFQTGTPVIIPLDP-ERNPVQNAQYFYKQHQKLKRARLAVEPLLEEVVSEINYLEQVRSSLSQLENYSSS-----------------------EDLQALDEIQEELIQQKYLESN--------YQRNRTNN-------------------------KESE--------------------PMRFTTPSGVELWIGRNNRQNDRLTFRSASDYDIWFHSQEIAGSHVLLRLTPGTVPEAADLQFAADYAAYYSRAR 529
BLAST of mRNA_H-paniculata_contig210.5479.1 vs. uniprot
Match: D8G6G5_9CYAN (Rqc2 homolog RqcH n=2 Tax=Microcoleaceae TaxID=1892252 RepID=D8G6G5_9CYAN) HSP 1 Score: 271 bits (693), Expect = 1.240e-76 Identity = 215/673 (31.95%), Postives = 320/673 (47.55%), Query Frame = 2
Query: 743 LQSVDFTTALVMSRELAQTVVPSRVENAYQLDPYNLAIGLRTLEGNMWLHVCWHPQGARCHVGAPPPREKEQKAYTFSQTLRSLIRGLNIVKVGLARPFERVVTLDLSTRLDEPPSYRIYVEIMASRSNVVLVAVDADGAETVAACAYQISPNKS-VRPLSTGQSYELPPVLVARRPTLEESLEDFTEGVGRVPTVQLKKALVGVYQGTSPALVNTMASCVPDLSPSVKVGELTPEQWNALYSGPWKRWLELVGDGTTTTAAADSGSTSPPVSSTREGSSISPQATTA--WLSKDGLSYYPTKLGGSGTXXXXXXXXEGREEDEASGFSSTALQRVMERYYRGTQSTEEFDELKRRCVARISATLAKLREREVEFE---RQVAAAQDDQVAELNRRGDLLVTYGHAWVQGETHVKCVDFDTGENIDIQISAADKTPVEEAQQAFKQGKKLKRSMVVVRELLDQVKTQILYAEGIEMALEQLRGGGSTTIPAPTSTTAYESGTAAAATASREELSVLRGISEELGLQGDRESTRKFAGVFGVKQAQVSNRGGGGGSGRMVGGNRRKGKSKGGTSKAGEGRVCIEGGGGGEEGSLVGLLELRRPAPGSPAVLVGRNNLQNDRITFSVARAHELWFHARGVAGAHVLLRLEPGQAGEDEDVQFAADIAVYFSKARQ 2743
+Q VDFTT + EL +P+R+E YQ D + +A+ LRT+ WL + WHPQGAR +G+PPPR + +TFSQ LR + L +V + P+ERV+ L + R EP + +YVEIM+ SNV+L D + CA+Q+S +S VRP+ TGQ YELPP L P+L E +E + + + VP QL++ L+ Y+G S ALV + A L P L+PE W LY+ W++WL+ A + + P S +PQ T W S+ L+ G+ E+ +Q+++ YY + + F +L + ++S+ LAKLR + F+ +Q A A D++ + DLL+ H W G + DF+TGE I + +K V+ AQ +K+ +KLKR+ + V LL V+ +I Y E +E AL L Y + E+L L I +EL ++Q + + G R+ G E R E G R P +L+GRNN QND +TF +A ++LWFH + + G+H LLRLEPG A E+ D+QFAA++A Y+S+ARQ
Sbjct: 4 VQPVDFTTLMAACCELRSDWLPARLEQVYQRDRHTVALALRTINRRGWLDISWHPQGARLCIGSPPPRTPD--TFTFSQQLRHQLGSLALVAIAQVAPWERVIDLQFARRPGEPALWHLYVEIMSKYSNVILTTQD----NLIVTCAHQVSAQQSSVRPIQTGQPYELPPSLTDAVPSLSEPIERWQQRISLVPG-QLRRNLLKNYRGLSSALVMS-AIAAAGLDPDQSTLNLSPEDWQQLYNC-WQQWLQ----------ALEKSNFQP---------SFTPQGYTVIDWNSRQSLN--------------------GKSAVES-------VQKLLNTYYTTELNQQVFAQLSHQLKQKLSSLLAKLRLKANTFKERLQQSARADADKL-----QADLLMANLHEWQPGMKTITLPDFETGEPATIPLDP-EKNAVQNAQALYKRHQKLKRARIAVEPLLAAVQEEIDYLEQVEAALSHLES--------------YHNS---------EDLQTLEEIRDEL-----------------IQQKYLEDPGN-----RLRAGQ--------------EARAAKE----------QGPDFYRYKTPSGFELLIGRNNRQNDLLTFRIAGDYDLWFHTQEIPGSHGLLRLEPGTAAEEADLQFAANLAAYYSRARQ 546
BLAST of mRNA_H-paniculata_contig210.5479.1 vs. uniprot
Match: UPI000EFCECAE (fibronectin-binding domain-containing protein n=1 Tax=Leptolyngbya sp. BC1307 TaxID=2029589 RepID=UPI000EFCECAE) HSP 1 Score: 267 bits (682), Expect = 5.270e-75 Identity = 209/668 (31.29%), Postives = 314/668 (47.01%), Query Frame = 2
Query: 743 LQSVDFTTALVMSRELAQTVVPSRVENAYQLDPYNLAIGLRTLEGNMWLHVCWHPQGARCHVGAPPPREKEQKAYTFSQTLRSLIRGLNIVKVGLARPFERVVTLDLSTRLDEPPSYRIYVEIMASRSNVVLVAVDADGAETVAACAYQISPNKS-VRPLSTGQSYELPPVLVARRPTLEESLEDFTEGVGRVPTVQLKKALVGVYQGTSPALVNTMASCVPDLSPSVKVGELTPEQWNALYSGPWKRWLELVGDGTTTTAAADSGSTSPPVSSTREGSSISPQATTAWLSKDGLSYYPTKLGGSGTXXXXXXXXEGREEDEASGFSSTALQRVMERYYRGTQSTEEFDELKRRCVARISATLAKLREREVEFERQVAAAQDDQVAELNRRGDLLVTYGHAWVQGETHVKCVDFDTGENIDIQISAADKTPVEEAQQAFKQGKKLKRSMVVVRELLDQVKTQILYAEGIEMALEQLRGGGSTTIPAPTSTTAYESGTAAAATASREELSVLRGISEELGLQGDRESTRKFAGVFGVKQAQVSNRGGGGGSGRMVGGNRRKGKSKGGTSKAGEGRVCIEGGGGGEEGSLVGLLELRRPAPGSPAVLVGRNNLQNDRITFSVARAHELWFHARGVAGAHVLLRLEPGQAGEDEDVQFAADIAVYFSKARQ 2743
+Q VDFTT + +S +L +P+R E YQ D Y L I LRTLE WL V WHPQ AR H+ APPP++ + +TFSQ L+ + GL + + P+ERV+ L + R DEP + +YVE+M SNV+L A + A+Q+S +S VRP+ TGQ Y PP + + P L+E + D+ + + +P +LKK +V Y G S ++ + + +L V +LT W+ L+ W+ WL + A +S T WL + Y T LG G + AS +Q +++ YY+ + EEF L + R+ LAKLR + F +++ Q DQ + ++ DLL+ + H W G T ++ DF+TGE + + ++ +K V+ AQ +K+ +KLKRS V LL VK +I Y E +E +L Q +PA Y + +L L + EL Q + Q NR G + G+S +E L G R P +L+GRNN QN+++TF A ++LW HA+ + G+HVLLRL+ G DE +Q AA +A Y+S+ARQ
Sbjct: 1 MQPVDFTTLMAVSADLRSHWLPARCEQVYQRDRYTLFIALRTLEERGWLAVSWHPQAARMHMAAPPPKQPD--TFTFSQQLKHQLGGLALTGIVPLSPWERVLDLQFARRPDEPALWHLYVEVMGKYSNVILTTA----AGQIVTAAHQVSEQQSSVRPIQTGQPYAPPPAIRGKLPALDEGIADWRDRIALIPG-KLKKMVVKAYSGVSSSVASQLILAA-ELPADVTTSDLTDADWHRLFES-WRSWLHCL--------ATES-------------------FTPGWLDQTAGGY--TVLG------------IGIAKPAAS------VQTLLDEYYQHQFNQEEFRRLHHQLSQRLKTLLAKLRRKADTFAQRLQ--QSDQAEQYRQQADLLMAHLHQWQPGMTQIELADFETGEPVKLTLNP-EKNAVQNAQGLYKRHQKLKRSRAAVMPLLTAVKAEIHYLEQVEDSLLQ--------VPA------YRT---------EADLRSLEEVRTELIAQTYLRDATGY---------QSGNRAG------------KSGRS--------------------QEQDLSGFR--RYTTPQGFELLIGRNNHQNEQLTFKQASDYDLWLHAQEIPGSHVLLRLDAGTVPGDETLQLAASLAAYYSRARQ 543 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig210.5479.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig210.5479.1 >prot_H-paniculata_contig210.5479.1 ID=prot_H-paniculata_contig210.5479.1|Name=mRNA_H-paniculata_contig210.5479.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=804bp MARTRRRRDAFHAVAAMLLCLQSAAMAWNNPAVTIKTRQVQLSGGSKLNFback to top mRNA from alignment at H-paniculata_contig210:930..11559- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig210.5479.1 ID=mRNA_H-paniculata_contig210.5479.1|Name=mRNA_H-paniculata_contig210.5479.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10630bp|location=Sequence derived from alignment at H-paniculata_contig210:930..11559- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig210:930..11559- >mRNA_H-paniculata_contig210.5479.1 ID=mRNA_H-paniculata_contig210.5479.1|Name=mRNA_H-paniculata_contig210.5479.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4824bp|location=Sequence derived from alignment at H-paniculata_contig210:930..11559- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |