mRNA_H-paniculata_contig21.5476.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig21.5476.1
Unique NamemRNA_H-paniculata_contig21.5476.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig21.5476.1 vs. uniprot
Match: A0A6H5KNH6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH6_9PHAE)

HSP 1 Score: 641 bits (1654), Expect = 1.260e-216
Identity = 340/710 (47.89%), Postives = 460/710 (64.79%), Query Frame = 1
Query:   79 IMPCAAGELCHIPDRTPESQNAHECRGGCGGRLHGLCGEVQEQVSDNLIHRICPSCLERDRKAFTVAATTAAACSSSSGTKRKIGTTGHSED-VNVKKSKPH-TPGGASGKS-RVRLSHGQKMDVLGLLKERVSHAQIAHRFGCGERTVSNIAQQRKKLEEEDKLAGCDQSAKSRRRGYFPKVDDRVLSLVEEARKVGLPVTRAVIQSFGHAAKKAVLEEATTTQDETKRLEAFGASVKWAKNFVSRNGMPSHALRGEAGNVDTAAIEKGLKEIRKVCEKYSLRNVFNVDKTILFYKVLPRITYLAESGTRKTTRGAKDMEDEDRISAYMCTNATGTAKVDMSIIGKSEYPRCFRWEKTPVKYFSQNNAWSDGPTFRKWWLEVFLPFVRRWTHEPVLLLINGSLSYGGMEDPTRQVTVMMYPPNCASKHQPMGLGIIATTKVYYRSRLLSLRASTVTGAETLRAQSKDRKMVAGTVGLAEGHSPHMLDAAELLHSAWGDVTEHTIARCWIKAETLPVTYQAILAQESGKYLGHDAQDAVREKLMEALNALSVGVHSAAQSPSIAGEELCEVLADLEIVPGEPANEAAVKMAQAWAGLEEQEEIAAALKLDSVDVLTEAANNISEDQSNPSDEKVEENNRGGLEGARVGIRAGLIPPPSYAELGQFFGPLEKVAASCGNDEAGDWLRKAKMSFIAEYSSHRTRQAGFGEYA 2199
            ++ CA  ELC +P+R    ++ HECR GCGGRLHG+CGE +E+     IHR+C  C+ + +K             SS   KR    +  + D    KK+KP     G +GKS R RL+ GQ+++VL LL E+ ++A+IA R+      +S I  +R++LE+         ++KS RRG FP+++  VL+L+EEAR+V LP+TRA I+SFG A +  ++   +T  D  +RL  FGAS KW +N V+R+ + S  L GEAG++D  A  +G+  IR+ C KY + N+FNVD+T ++Y++LP+ TYL+ +  RKT RG K M+ +DR+SAYMCTNATGTAKV M+IIG+++ PRCFR   +P+ YFSQ NAWSD  TF+KWWLEVF+PF+R+WTHEPVLLL++G  S+G + DP  Q+ V  YPPNC  K+QPM +G+I TTK YYR  LL +R ST++  +TLR Q+KDRKM AGT+GLAEGH  H+LDAAELL  AW  VT  TI RCW+KAETLP  +QA LA ++GK + + A+DA   +L E LNALS+GV  AA  P +   EL EVLA+L I PG PA+  A+K  +AWAGLEEQ E A  L  D+ ++  E  NN  ++  N SD                        PPS+AEL  FFGPLE+ A SCG  +AG +LRKAKM+F+A   +   RQ     +A
Sbjct:    1 MLVCADQELCKLPNRPLGEKDGHECRLGCGGRLHGICGEPEEEGGQE-IHRVCNPCIAKKQKTP----------GSSKQPKRASPESELAGDGAAAKKTKPAGKAAGKAGKSTRTRLNFGQQLEVLKLLDEKTTYAEIARRYSISTSAISLIKGKRQQLEQAAATNARSTTSKSSRRGDFPELEKDVLALIEEARRVPLPITRATIESFGIAVRDKLVAAPSTPADAKERLRMFGASEKWVRNLVNRHNLTSFVLHGEAGSLDAEAAAEGMAAIRRACSKYKVENIFNVDETGMYYRLLPKRTYLSTTEKRKTARGTKGMKAKDRVSAYMCTNATGTAKVPMAIIGRAKNPRCFRSSPSPLTYFSQANAWSDNATFKKWWLEVFIPFIRKWTHEPVLLLMDGCASHGDLVDPRGQIEVSTYPPNCTYKYQPMDMGVIETTKRYYRKGLLDIRVSTMSSVDTLRQQAKDRKMAAGTMGLAEGHPAHLLDAAELLEGAWDKVTPTTITRCWVKAETLPAEHQAQLANDAGKGVVNGAKDAGVAELTETLNALSIGVRDAASGPGVQDSELVEVLANLNIAPGAPAHPTAIKAVEAWAGLEEQPEFAETLSEDAKEIFMEKVNNTFKEDENISDXXXX---XXXXXXXXXXXXXXXKAPPSFAELADFFGPLEQYAESCGIGDAGHFLRKAKMAFLAATFARPARQLDIRVFA 696          
BLAST of mRNA_H-paniculata_contig21.5476.1 vs. uniprot
Match: A0A6H5KD82_9PHAE (HTH CENPB-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD82_9PHAE)

HSP 1 Score: 513 bits (1322), Expect = 4.370e-168
Identity = 283/579 (48.88%), Postives = 369/579 (63.73%), Query Frame = 1
Query:   82 MPCAAGELCHIPDRTPESQNAHECRGGCGGRLHGLCGEVQEQVSDNLIHRICPSCLERDRKAFTVAATTAAACSSSSGTKRKIGTTGHSEDVNVKKSKPHTPGGASG--KSRVRLSHGQKMDVLGLLKERVSHAQIAHRFGCGERTVSNIAQQRKKLEEEDKLAGCDQSAKSRRRGYFPKVDDRVLSLVEEARKVGLPVTRAVIQSFGHAAKKAVLEEATTTQDETKRLEAFGASVKWAKNFVSRNGMPSHALRGEAGNVDTAAIEKGLKEIRKVCEKYSLRNVFNVDKTILFYKVLPRITYLAESGTRKTTRGAKDMEDEDRISAYMCTNATGTAKVDMSIIGKSEYPRCFRWEKTPVKYFSQNNAWSDGPTFRKWWLEVFLPFVRRWTHEPVLLLINGSLSYGGMEDPTRQVTVMMYPPNCASKHQPMGLGIIATTKVYYRSRLLSLRASTVTGAETLRAQSKDRKMVAGTVGLAEGHSPHMLDAAELLHSAWGDVTEHTIARCWIKAETLPVTYQAILAQESGKYLGHDAQDAVREKLMEALNALSVGVHSAAQSPS-IAGEELCEVLADLEIVPG 1809
            MPCA GELC   DRTP+  + H C+GGCGGRLHG CG V E   DN  H IC +C+ R                    T ++ GT          K +  T GG+     SR RL   +K+D+L +L ++VSHAQIA RF C  R +      R+K+E     AGC  S K  R+G FP+VD+  L L+++ARK  +PVTR V++SFG +A+  +L    T+    +R+E F A  +WAKNFV RN + S  L GEAG+VD  AI++G++EIR +CEKY  R +FNVD+T L +K++PR TYL+ S  RKT RG+K M  +DR+SA MC NA GTAKVDM+IIG+++ PRCF+   +P+KYFSQ NAWSD  TF +WWLEVFLPF+RR+THEPVLLL++G  S+  + D   QVTV  YPP C + HQPM LG+IA TKV Y   LL ++ ST+  A+TLRAQ+K RKM AGT+GLA+GH PH+ DAAELL  AW  VT   IARC++KAETLP    A L ++  K    +  D   + L E +N LS  V  A +  S +  EE+ E+LA+L I PG
Sbjct:    1 MPCAEGELCLRQDRTPQRPHGHPCKGGCGGRLHGNCGSVFE---DNEQHLICSTCVAR--------------------TSKRKGTPAKGAGAGQSKRQKQTSGGSKKGTASRARLDSNKKLDILKMLDQKVSHAQIADRFKCSLRFIGTANAGRQKVETAT-AAGCG-SQKIARKGDFPEVDEIALDLLDKARKAKMPVTRDVLRSFGRSARATLLAGTATSAAVRERVEDFKAGERWAKNFVKRNQIQSVRLHGEAGSVDKEAIKEGMEEIRALCEKYPARFIFNVDETGLQWKLMPRRTYLSTSEDRKTARGSKSMHFKDRLSAIMCCNADGTAKVDMAIIGRAKEPRCFKNGGSPLKYFSQTNAWSDSATFLRWWLEVFLPFLRRFTHEPVLLLMDGCSSHSHLVDDRGQVTVKTYPPLCTAVHQPMDLGVIAKTKVNYGKELLDVKTSTMLMADTLRAQAKARKMKAGTLGLAQGHQPHVRDAAELLQKAWASVTAQDIARCFVKAETLPEEMAAELTKQHDK-TRFNVADPDLKALAETVNTLSTSVQDAQKQGSRVVDEEISELLAELNIEPG 553          
BLAST of mRNA_H-paniculata_contig21.5476.1 vs. uniprot
Match: A0A6H5L4D9_9PHAE (DDE-1 domain-containing protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4D9_9PHAE)

HSP 1 Score: 503 bits (1294), Expect = 2.240e-164
Identity = 281/588 (47.79%), Postives = 376/588 (63.95%), Query Frame = 1
Query:  442 VLGLLKERVSHAQIAHRFGCGERTVSNIAQQRKKLEEEDKLAGCDQSAKSRRRGYFPKVDDRVLSLVEEARKVGLPVTRAVIQSFGHAAKKAVLEEATTTQDETKRLEAFGASVKWAKNFVSRNGMPSHALRGEAGNVDTAAIEKGLKEIRKVCEKYSLRNVFNVDKTILFYKVLPRITYLAESGTRKTTRGAKDMEDEDRISAYMCTNATGTAKVDMSIIGKSEYPRCFRWEKTPVKYFSQNNAWSDGPTFRKWWLEVFLPFVRRWTHEPVLLLINGSLSYGGMEDPTRQVTVMMYPPNCASKHQPMGLGIIATTKVYYRSRLLSLRASTVTGAETLRAQSKDRKMVAGTVGLAEGHSPHMLDAAELLHSAWGDVTEHTIARCWIKAETLPVTYQAILAQESGKYLGHDAQDAVREKLMEALNALSVGVHSA-AQSPSIAGEELCEVLADLEIVPGEPANEAAVKMAQAWAGLEEQEEIAAALKLDSVDVLTE--AANNISEDQSNPSDEKVEENNRGGLEGARVGIRAGLIPPPSYAELGQFFGPLEKVAASCGNDEAGDWLRKAKMSFIAEYSSHRTRQAGFGEY 2196
            +L L+ ++V+H Q+A RF C ER V ++ + RKK E E   AG   S K+ R G  P+VD   L L+E+ARK  +PVTR V++SFG AA+  +L +   +++   R+E F A  +WA+NFV RN + S  L GEAG+V+  AI++ ++E++ +C KY  R + NVD+T L +K++PR  YL+    RKT RG+K M  +DR+SA MC NA GTAKVDMSIIGK++ PRCF    +P+KYFSQ NAWSD  TFRKWW EVFLPFVRR+THEPVLLL++G  S+G + D   QVT+  YPPNC S HQP+ LGIIA TK  YR  LL ++ ST+  A+TLRA++K RKM AGT+GLA+GH PH+ DAAELL  AW  VT   IARC++KAETLP    A L ++ GK   H A+  ++  L E LN LS  VH A  Q   I  E++ E++A+L I PG+P  E AV   Q WA +E+ +E+  AL+ D+V+ +T   A   +S  +          ++  GL   RV        PP+Y EL   FG LE  A   GN +A  +L KAKM+ IA +S  R RQA   E+
Sbjct:    1 MLKLMDQKVTHEQLADRFKCSERLVRDVKKNRKKYETEA-AAGRGGSKKNVRTGNNPEVDAIALDLLEKARKTKMPVTRDVLRSFGRAARATLLADPAASKEVKARVEDFKAGERWARNFVKRNSIDSVRLHGEAGSVNKEAIKEAMEELKALCAKYLARLIVNVDETGLQWKLMPRRMYLSNLEDRKTARGSKGMFFKDRLSAIMCANADGTAKVDMSIIGKAKGPRCFNDTPSPLKYFSQANAWSDTATFRKWWCEVFLPFVRRFTHEPVLLLMDGCASHGDLVDDRGQVTIKFYPPNCTSVHQPVDLGIIAETKCNYRKELLDVKTSTMLVADTLRAEAKARKMKAGTMGLAQGHQPHVRDAAELLQKAWASVTAQDIARCFVKAETLPDEMAAELTKQHGKSQFHVAEPTLKA-LTETLNTLSTSVHEAHKQGTQIEDEDIAELIAELRIEPGKPLLEEAVNAIQGWATIEDDDEVVEALREDTVEDMTAQLAGTRVSTGREEEDXXXXSGDDNTGL-ARRV--------PPAYGELSSHFGVLEAAAEESGNGDAALYLAKAKMAMIAAHSKRRVRQADMREF 577          
BLAST of mRNA_H-paniculata_contig21.5476.1 vs. uniprot
Match: A0A6H5J7S2_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7S2_9PHAE)

HSP 1 Score: 497 bits (1280), Expect = 2.800e-161
Identity = 300/704 (42.61%), Postives = 404/704 (57.39%), Query Frame = 1
Query:   82 MPCAAGELCHIPDRTPESQNAHECRGGCGGRLHGLCGEVQEQVSDNLIHRICPSCLERDRKAFTVAATTAAACSSSSGTKRKIGTTGHSEDVNVKKSKPHTPGGASGKS--RVRLSHGQKMDVLGLLKERVSHAQIAHRFGCGERTVSNIAQQRKKLEEEDKLAGCDQSAKSRRRGYFPKVDDRVLSLVEEARKVGLPVTRAVIQSFGHAAKKAVLEEATTTQDETKRLEAFGASVKWAKNFVSRNGMPSHALRGEAGNVDTAAIEKGLKEIRKVCEKYSLRNVFNVDKTILFYKVLPRITYLAESGTRKTTRGAKDMEDEDRISAYMCTNATGTAKVDMSIIGKSEYPRCFRWEKTPVKYFSQNNAWSDGPTFRKWWLEVFLPFVRRWTHEPVLLLINGSLSYGGMEDPTRQVTVMMYPPNCASKHQPMGLGIIATTKVYYRSRLLSLRASTVTGAETLRAQSKDRKMVAGTVGLAEGHSPHMLDAAELLHSAWGDVTEHTIARCWIKAETLPVTYQAILAQESGKYLGHDAQDAVREKLMEALNALSVGVHSAAQSPS-IAGEELCEVLADLEIVPGEPANEAAVKMAQAWAGLEEQEEIAAALKLDSVDVLTE--AANNISEDQSNPSDEKVEENNRGGLEGARVGIRAGLIPPPSYAELGQFFGPLEKVAASCGNDEAGDWLRKAKMSFIAEYSSHRTRQ 2178
            MPCA GELC   DRTP+  + H C+GGCGGRLHG CG   E   DN  HRIC +C+ R                    T ++  T          K +  T GG    +  R RL + +K+++L +L ++VSHAQIA RF C  R +  +   R+K+E     AGC  S K+ R+G FP+VD+  L L+++ARK  +PVTR V++SFG + +  +L +  T+    +R+E F A  +WAKNFV RN + S  L GEAG+VD  AI++G++EIR +CEKY  R + NVD++ L +K++PR TYL+ S  RKT RG+K M  +D +SA MC NA GTAKV M+I+G+++ PRCF+   +P+KYFSQ NAWSD  TF K                              + D   QVTV  YPP C + HQPM LG+IA TKV YR  LL ++ ST+  A+TLRAQ+K RKM+ GT+GLA+GH PH+ DAAELL  AW  VT   IARC++KAE+LP    A L ++ GK   + A+  ++  L E +N LS  V  A +  S +  EE+ E+LA+L I PG+P    AV   Q WA +E+ EE+  AL+LD+V+ +T   A  N+S                      R   RA    PP Y EL   FG LE  A   GN +A  +L KAKMS IA +S+ R RQ
Sbjct:    1 MPCAEGELCLQQDRTPQPPHGHPCKGGCGGRLHGNCGSGFE---DNEQHRICTTCVAR--------------------TSKRKATPAKGAGAGPSKRQKQTSGGCKKGTGFRARLDNNKKLEILKMLDQKVSHAQIADRFKCLLRFIGTVKAGRQKVETAT-AAGCS-SQKTARKGDFPEVDEIALDLLDKARKAKMPVTRDVLRSFGRSTRATLLADTATSAAVRERVEDFKAGKRWAKNFVKRNKIQSVRLHGEAGSVDKEAIKEGMEEIRALCEKYPARFIVNVDESGLQWKLMPRRTYLSTSEDRKTARGSKSMNFKDGLSAIMCCNADGTAKVYMAIMGRAKEPRCFKNGGSPLKYFSQTNAWSDSATFLKC----------------------------DLVDDRGQVTVKTYPPLCTAVHQPMDLGVIAKTKVNYRKELLDVKTSTMLVADTLRAQAKARKMIVGTMGLAQGHQPHVRDAAELLQKAWASVTAQDIARCFVKAESLPEEMAAELTKQHGKTRFNVAEPDLKA-LAETVNTLSTSVQDAQKQGSRVVDEEISELLAELNIEPGKPVAGEAVAAIQRWATIEDDEEVVEALRLDAVEDMTALLAGTNLSTGGDXXXXXXXXXXXXENTGRERRAPRA----PPGYEELSSHFGALEVAAEDSGNGDAAFYLTKAKMSMIAAHSARRVRQ 646          
BLAST of mRNA_H-paniculata_contig21.5476.1 vs. uniprot
Match: A0A6H5J9E2_9PHAE (DDE-1 domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9E2_9PHAE)

HSP 1 Score: 460 bits (1184), Expect = 3.550e-149
Identity = 250/504 (49.60%), Postives = 328/504 (65.08%), Query Frame = 1
Query:  670 VTRAVIQSFGHAAKKAVLEEATTTQDETKRLEAFGASVKWAKNFVSRNGMPSHALRGEAGNVDTAAIEKGLKEIRKVCEKYSLRNVFNVDKTILFYKVLPRITYLAESGTRKTTRGAKDMEDEDRISAYMCTNATGTAKVDMSIIGKSEYPRCFRWEKTPVKYFSQNNAWSDGPTFRKWWLEVFLPFVRRWTHEPVLLLINGSLSYGGMEDPTRQVTVMMYPPNCASKHQPMGLGIIATTKVYYRSRLLSLRASTVTGAETLRAQSKDRKMVAGTVGLAEGHSPHMLDAAELLHSAWGDVTEHTIARCWIKAETLPVTYQAILAQESGKY-------------LGHDAQDAVREKLMEALNALSVGVHSAAQSPSIAGEELCEVLADLEIVPGEPANEAAVKMAQAWAGLEEQEEIAAALKLDSVDVLTEAANNISEDQSNPSDEKVEENNRGGLEGARVGIRAGLIPPPSYAELGQFFGPLEKVAASCGNDEAGDWLRKAKMS 2142
            VT  VI+SFG +AK  +L  A TT    KRLE F A  KW+KNFV RN + SH L G AG+VD   I++G++E+R  CEKY  RN+FNVD+T + +K++ R TYLA    RKTTRG+K+ME +DRISA MC NATGTAKV ++IIG ++ PRCFR  K P+KYF+Q+NAWSDGPTF+KWW EVFLPF+RRWTHEPVLLL++G  S+G + DP  QV V+MYPPNC S HQPM +GIIA TKV YR  LL  + ST+  A  LRA++K RKM  GT GLAEG+ PH+LDAA+LL +A G +T  TIARC++KA+TLP   +A L    GK+             LG   +++V + L + L ++S  VH A +       EL E+LA L I  GEPA+ AAV+ A+ WA +E+Q ++  A++ D+VD +TE  +  +  + +  DE  +E              +    PP YA L   FG LE  A   GN +A   L+KAKM+
Sbjct:    6 VTGNVIRSFGRSAKATLLGSAKTTDSVRKRLEDFKAGDKWSKNFVKRNDLHSHKLHGTAGSVDHDRIKEGMEEVRAACEKYPARNIFNVDETGIQWKLIARRTYLAAFEDRKTTRGSKNMEFKDRISAIMCANATGTAKVSLAIIGTAKNPRCFRRRKCPLKYFAQSNAWSDGPTFKKWWQEVFLPFIRRWTHEPVLLLMDGCSSHGDLIDPVGQVEVVMYPPNCTSVHQPMDMGIIAATKVIYRRELLDAKVSTMLVAHALRAEAKSRKMARGTAGLAEGNHPHVLDAADLLKTARGRITPTTIARCFVKAKTLPEDMEAELTAAHGKHRPSGSAAPAGGPVLGRADKESV-DLLAKTLTSMSSRVHEAQEKSYGVDTELTEMLAALGITAGEPADAAAVRAAEVWATVEDQPDVVEAMQQDAVDEMTELLDGTAPAEESSDDEASKE-------------PSSHTAPPPYAALSSHFGALETAAEGSGNRDAAFHLQKAKMA 495          
BLAST of mRNA_H-paniculata_contig21.5476.1 vs. uniprot
Match: A0A6H5KUT5_9PHAE (DDE-1 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUT5_9PHAE)

HSP 1 Score: 461 bits (1185), Expect = 6.820e-149
Identity = 249/512 (48.63%), Postives = 331/512 (64.65%), Query Frame = 1
Query:  664 LPVTRAVIQSFGHAAKKAVLEEATTTQDETKRLEAFGASVKWAKNFVSRNGMPSHALRGEAGNVDTAAIEKGLKEIRKVCEKYSLRNVFNVDKTILFYKVLPRITYLAESGTRKTTRGAKDMEDEDRISAYMCTNATGTAKVDMSIIGKSEYPRCFRWEKTPVKYFSQNNAWSDGPTFRKWWLEVFLPFVRRWTHEPVLLLINGSLSYGGMEDPTRQVTVMMYPPNCASKHQPMGLGIIATTKVYYRSRLLSLRASTVTGAETLRAQSKDRKMVAGTVGLAEGHSPHMLDAAELLHSAWGDVTEHTIARCWIKAETLPVTYQAILAQESGKYLGHDAQDAVREKLMEALNALSVGVHSAA-QSPSIAGEELCEVLADLEIVPGEPANEAAVKMAQAWAGLEEQEEIAAALKLDSVDVLTEAANNISEDQSNPSDEKVEENNRGGLEGARVGIRAGLIPPPSYAELGQFFGPLEKVAASCGNDEAGDWLRKAKMSFIAEYSSHRTRQAGFGEY 2196
            +PVTR V++SFG +A+  +L +  T+     ++E F A  KWAKNFV RN + S  L GEAG+V+ AAI++G+ E+R +C KY  R +FNVD+T L +K+LPR TYL+ S  RKT RG+K M  +DR+SA+MC NA GTAKVDM+IIG+++ PRCF+   +P+KY+SQ NAWSD  TF KWWL+VFLPFVRR+THEPVLLL++G  S+G + D   QVTV  YPP C S HQPM LGIIA TKV +R  LL ++ ST+  A+TLRAQ+K RKM AGT+GLA+GH PH+ DAAELL  AW  +T   IARC++KA+TLP    A L  + GK     A+  ++  L E +N LS  V  A  Q   I  EE+ E+ A+L+I PG+P  E AV   + WA +E+ EE+  AL+LD+ D + E    +        +++VE     G +    G       PP Y EL   F  LE  A   GN +A  +L KAKM+ IA +S+ R RQA   E+
Sbjct:   20 MPVTRDVLRSFGRSARTTLLADTATSAAVRAKVEDFRAGEKWAKNFVKRNNIHSVRLHGEAGSVNMAAIKEGMDEVRALCAKYPARFIFNVDETGLQWKLLPRRTYLSTSEDRKTARGSKSMYFKDRLSAFMCCNADGTAKVDMAIIGRAKEPRCFKSAPSPLKYYSQTNAWSDSATFLKWWLQVFLPFVRRFTHEPVLLLMDGCASHGDLVDDRGQVTVKFYPPKCTSVHQPMDLGIIAKTKVVFRKELLDVKTSTMLVADTLRAQAKARKMKAGTMGLAQGHQPHLRDAAELLKKAWASITAQDIARCFVKADTLPSEMAAELTTQHGKTRFSIAEPDLKA-LTETVNKLSTSVGEAQKQGAGIVDEEISELFAELDIEPGKPVEEEAVSAIRGWATIEDDEEVTEALRLDAADEMAELLAGMQVTTGGDEEDEVE-----GSDDDNSGPERRA--PPDYTELSPHFSVLEAAADESGNADAAFFLTKAKMAMIAAHSARRVRQADMREF 523          
BLAST of mRNA_H-paniculata_contig21.5476.1 vs. uniprot
Match: A0A6H5JP23_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP23_9PHAE)

HSP 1 Score: 461 bits (1185), Expect = 4.040e-143
Identity = 249/512 (48.63%), Postives = 331/512 (64.65%), Query Frame = 1
Query:  664 LPVTRAVIQSFGHAAKKAVLEEATTTQDETKRLEAFGASVKWAKNFVSRNGMPSHALRGEAGNVDTAAIEKGLKEIRKVCEKYSLRNVFNVDKTILFYKVLPRITYLAESGTRKTTRGAKDMEDEDRISAYMCTNATGTAKVDMSIIGKSEYPRCFRWEKTPVKYFSQNNAWSDGPTFRKWWLEVFLPFVRRWTHEPVLLLINGSLSYGGMEDPTRQVTVMMYPPNCASKHQPMGLGIIATTKVYYRSRLLSLRASTVTGAETLRAQSKDRKMVAGTVGLAEGHSPHMLDAAELLHSAWGDVTEHTIARCWIKAETLPVTYQAILAQESGKYLGHDAQDAVREKLMEALNALSVGVHSAA-QSPSIAGEELCEVLADLEIVPGEPANEAAVKMAQAWAGLEEQEEIAAALKLDSVDVLTEAANNISEDQSNPSDEKVEENNRGGLEGARVGIRAGLIPPPSYAELGQFFGPLEKVAASCGNDEAGDWLRKAKMSFIAEYSSHRTRQAGFGEY 2196
            +PVTR V++SFG +A+  +L +  T+     ++E F A  KWAKNFV RN + S  L GEAG+V+ AAI++G+ E+R +C KY  R +FNVD+T L +K+LPR TYL+ S  RKT RG+K M  +DR+SA+MC NA GTAKVDM+IIG+++ PRCF+   +P+KY+SQ NAWSD  TF KWWL+VFLPFVRR+THEPVLLL++G  S+G + D   QVTV  YPP C S HQPM LGIIA TKV +R  LL ++ ST+  A+TLRAQ+K RKM AGT+GLA+GH PH+ DAAELL  AW  +T   IARC++KA+TLP    A L  + GK     A+  ++  L E +N LS  V  A  Q   I  EE+ E+ A+L+I PG+P  E AV   + WA +E+ EE+  AL+LD+ D + E    +        +++VE     G +    G       PP Y EL   F  LE  A   GN +A  +L KAKM+ IA +S+ R RQA   E+
Sbjct:    1 MPVTRDVLRSFGRSARTTLLADTATSAAVRAKVEDFRAGEKWAKNFVKRNNIHSVRLHGEAGSVNMAAIKEGMDEVRALCAKYPARFIFNVDETGLQWKLLPRRTYLSTSEDRKTARGSKSMYFKDRLSAFMCCNADGTAKVDMAIIGRAKEPRCFKSAPSPLKYYSQTNAWSDSATFLKWWLQVFLPFVRRFTHEPVLLLMDGCASHGDLVDDRGQVTVKFYPPKCTSVHQPMDLGIIAKTKVVFRKELLDVKTSTMLVADTLRAQAKARKMKAGTMGLAQGHQPHLRDAAELLKKAWASITAQDIARCFVKADTLPSEMAAELTTQHGKTRFSIAEPDLKA-LTETVNKLSTSVGEAQKQGAGIVDEEISELFAELDIEPGKPVEEEAVSAIRGWATIEDDEEVTEALRLDAADEMAELLAGMQVTTGGDEEDEVE-----GSDDDNSGPERRA--PPDYTELSPHFSVLEAAADESGNADAAFFLTKAKMAMIAAHSARRVRQADMREF 504          
BLAST of mRNA_H-paniculata_contig21.5476.1 vs. uniprot
Match: A0A6H5K1S6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1S6_9PHAE)

HSP 1 Score: 443 bits (1139), Expect = 7.640e-141
Identity = 265/594 (44.61%), Postives = 358/594 (60.27%), Query Frame = 1
Query:  406 SRVRLSHGQKMDVLGLLKERVSHAQIAHRFGCGERTVSNIAQQRKKLEEEDKLAGCDQSAKSRRRGYFPKVDDRVLSLVEEARKVGLPVTRAVIQSFGHAAKKAVLEEATTTQDETKRLEAFGASVKWAKNFVSRNGMPSHALRGEAGNVDTAAIEKGLKEIRKVCEKYSLRNVFNVDKTILFYKVLPRITYLAESGTRKTTRGAKDMEDEDRISAYMCTNATGTAKVDMSIIGKSEYPRCFRWEKTPVKYFSQNNAWSDGPTFRKWWLEVFLPFVRRWTHEPVLLLINGSLSYGGMEDPTRQVTVMMYPPNCASKHQPMGLGIIATTKVYYRSRLLSLRASTVTGAETLRAQSKDRKMVAGTVGLAEGHSPHMLDAAELLHSAWGDVTEHTIARCWIKAETLPVTYQAILAQESGKYLGHDAQDAVREKLMEALNALSVGVHSAAQSPS-IAGEELCEVLADLEIVPGEPANEAAVKMAQAWAGLEEQEEIAAALKLDSVDVLTE--AANNISEDQSNPSDEKVEENNRGGLEGARVGIRAGLIPPPSYAELGQFFGPLEKVAASCGNDEAGDWLRKAKMSFIAEYSSHRTRQ 2178
            SR RL + +K++ L +L ++VSHAQIA RF C  R +  +   R+K+E     AGC  S K+ R+  FP+   R             P  RA         +  +L +  T+    +R+E F A  +WAKNFV RN + S  L GEAG+VD  AI++G+ EIR +CEKY  R +FNVD+T L +K++P+ TYL+ S  RKT RG+K M  +DR++A MC NA GTAKVDM+IIG+++ PRCF+   +P++    +NA SD  TF KWWLEVFLPFVRR+THEPVLLL++G  S+  + D   QVTV  YPP C + HQPM LG+IA TKV YR  LL ++ ST+  A+TLRAQ+K RKM AGT+GLA+GH PH+ DAAELL  AW  VT   IARC++KAETLP    A L ++      + A+  ++  L E +N +S  V  A +  S +  EE+ E+LA+L I PG+P    AV   Q WA +E++EE+  AL+LD+V+ +T   A  N+S    +             +   R   RA    PP Y EL   FG L   A   GN +A  +  KAKMS IA +S+ R RQ
Sbjct:   40 SRARLDNNKKLEFLKMLDQKVSHAQIADRFKCSLRFIGTVKAGRQKVETAT-AAGCG-SQKTARKEDFPEGTLR-------------PPARAA------QCRATLLADTATSAAVRERVEDFKAGQRWAKNFVKRNKIQSVRLHGEAGSVDKEAIKEGMGEIRALCEKYPARFIFNVDETGLQWKLMPKRTYLSTSENRKTARGSKSMHLKDRLAAIMCCNADGTAKVDMAIIGRAKEPRCFKNGGSPLQVLLADNAGSDSATFLKWWLEVFLPFVRRFTHEPVLLLMDGCSSHSDLVDDRGQVTVKTYPPLCTAVHQPMDLGVIAKTKVNYRKELLDVKTSTMLVADTLRAQAKARKMKAGTMGLAQGHQPHVRDAAELLQKAWASVTAQDIARCFVKAETLPEEMAAELTKQHRNTRFNVAEPDLKV-LAETVNTVSTSVQDAQKQGSRVVDEEISELLAELNIEPGKPVAGEAVAAIQGWATIEDEEEVVEALRLDAVEDMTALLAGTNLSTGGDDXXXXXXXXXXGENMGRERRAPRA----PPGYEELSLHFGALAVAAEDSGNGDAAFYPTKAKMSMIAAHSARRVRQ 607          
BLAST of mRNA_H-paniculata_contig21.5476.1 vs. uniprot
Match: A0A6H5JMF1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMF1_9PHAE)

HSP 1 Score: 396 bits (1017), Expect = 1.690e-123
Identity = 245/562 (43.59%), Postives = 320/562 (56.94%), Query Frame = 1
Query:  664 LPVTRAVIQSFGHAAKKAVLEEATTTQDETKRLEAFGASVKWAKNFVSRNGMPSHALRGEAGNVDTAAI-------EKGLK-------------EIRK----------------------------------VCEKYSLRNVFNVDKTILFYKVLPRITYLAESGTRKTTRGAKDMEDEDRISAYMCTNATGTAKVDMSIIGKSEYPRCFRWEKTPVKYFSQNNAWSDGPTFRKWWLEVFLPFVRRWTHEPVLLLINGSLSYGGMEDPTRQVTVMMYPPNCASKHQPMGLGIIATTKVYYRSRLLSLRASTVTGAETLRAQSKDRKMVAGTVGLAEGHSPHMLDAAELLHSAWGDVTEHTIARCWIKAETLPVTYQAILAQESGKYLGHDAQDAVREKLMEALNALSVGVHSAAQSPS-IAGEELCEVLADLEIVPGEPANEAAVKMAQAWAGLEEQEEIAAALKLDSVDVLTE--AANNISEDQSNPSDEKVEENNRGGLEGARVGIRAGLIPPPSYAELGQFFGPLEKVAASCGNDEAGDWLRKAKMSFIAEYSSHRTRQ 2178
            +PVTR V++ FG +A+  +L +  T+    +R+E   A  +WAKNFV RN + S  L GEAG VD  AI       E GL+             E RK                                  + +K +++ +FNVD+T L +K++PR TYL+ S  RKT RG+K M  +DR+SA MC NA GTAKVDM+IIG+++ PRCF    +P+KYFSQ NAWSD  TF  WWL VFLPFVRR+TH+PVLLL++G  S+  + D   QVTV  YPP C + HQPM LG+IA TKV YR  LL ++ ST+  A+TLRAQ+K RKM AGT+GLA+GH PH+ DAAELL  AW  VT   IARC++KAETLP    A L ++ GK   + A+  ++  L E +  LS  V  A +  S +  EE+ E+LA+L I P +P    AV   Q WA +E+ EE   AL+LD+V+ +T   A  N+S    +                 R   RA    PP Y EL   FG LE  A   GN  A  +L KAKMS IA +S+ R RQ
Sbjct:    1 MPVTRDVLRRFGRSARATLLADTATSAAVRERVEDLKAGERWAKNFVKRNKIQSVRLHGEAGIVDKEAIKFIFNVDETGLQWKLMPRRAYLSTSEDRKTARASKSMRAGERWAKNFVKRNKIQSVRLHGEAGIVDKEAIKFIFNVDETGLQWKLMPRRTYLSTSEDRKTARGSKSMHFKDRLSAIMCCNADGTAKVDMAIIGRAKEPRCFENGGSPLKYFSQANAWSDSATFLTWWLVVFLPFVRRFTHKPVLLLMDGCSSHSDLVDDRGQVTVKTYPPLCTAVHQPMDLGVIAKTKVNYRKELLDVKTSTMLVADTLRAQAKARKMKAGTMGLAQGHQPHVRDAAELLQKAWASVTAQDIARCFVKAETLPEEMAAELTKQHGKTRFNVAKPDLKA-LAETVKTLSTSVKDAQKQGSRVVDEEISELLAELNIEPRKPVAGEAVAAIQGWATIEDDEEAVEALRLDAVEDMTALLAGTNLSTGGGDXXXXXXXXXXXENTGRERRAPRA----PPGYEELSPHFGALEVAAEDSGNGGAAFYLTKAKMSMIAAHSARRVRQ 557          
BLAST of mRNA_H-paniculata_contig21.5476.1 vs. uniprot
Match: A0A6H5JH32_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH32_9PHAE)

HSP 1 Score: 393 bits (1009), Expect = 2.950e-122
Identity = 249/593 (41.99%), Postives = 331/593 (55.82%), Query Frame = 1
Query:  451 LLKERVSHAQIAHRFGCGERTVSNIAQQRKKLEEEDKLAGCDQSAKSRRRGYFPKVDDRVLSLVEEARKVGLPVTRAVIQSFGHAAKKAVLEEATTTQDETKRLEAFGASVKWAKNFVSRNGMPSHALRGEAGNVDTAAIEKGLKEIRKVCEKYSLRNVFNVDKTILFYKVLPRITYLAESGTRKTTRGAKDMEDEDRISAYMCTNATGTAKVDMSIIGKSEYPRCFRWEKTPVKYFSQNNAWSDGPTFRKWWLEVFLPFVRRWTHEPVLLLINGSLSYGGMEDPTRQVTVMMYPPNCASKHQPMGLGIIATTKVYYRSRLLSLRASTVTGAETLRAQSKDRKMVAGTVGLAEGHSPHMLDAAELLHSAWGDVTEHTIARCWIKAETLPVTYQAILAQESGK------------------------------YLGHDAQDAVREK----------------------------LMEALNALSVGVHSAAQSPS-IAGEELCEVLADLEIVPGEPANEAAVKMAQAWAGLEEQEEIAAALKLDSVDVLTE--AANNISEDQSNPSDEKVEENNRGGLEGARVGIRAGLIPPPSY 2046
            +L ++ SHAQIA RF C  R +  +   R+K  E    AGC  S K+ R+G FP+VD+  L L+E+ARK  +PVTR V++SFG +A+  +L +  T+    + +E F A  +WAKNFV RN + S  L GE G+VD  AI+KG++EIR + EKY                     TYL+ S  RKT RG+K M  +DR+SA MC NA GTAKVDM+IIG+++ PRCF+   +P+KYFSQ NAWS   T  KWWLEVFLPFVRR+THEPVLLL++G  S+  + D   +VTV  YPP C + HQPMG  +IA TKV YR     ++ ST+  A+TLRAQ+K RKM AGT+GLA+GH PH+ DAAELL  AW  VT   IARC++KAETLP    A L ++ GK                              +L + A+  V+ +                            L E +N LS  V  A +  S +  EE+ E+LA L I PG+P    AV   Q  A +E+ EE+  AL+LD+V+ +    A  N+S    +  DE+  +  RGG    R   R     PP Y
Sbjct:    1 MLDQKASHAQIADRFKCSLRFMGTVKTGREKKVETAIAAGCG-SQKTARKGDFPEVDEIALDLLEKARKAIMPVTRDVLRSFGRSARATLLADTATSAAVREGVEDFKAGERWAKNFVKRNKIQSVRLHGETGSVDKEAIKKGMEEIRALYEKYPAGR-----------------TYLSTSEDRKTARGSKSMHFKDRLSAIMCCNADGTAKVDMAIIGRAKEPRCFKKGGSPLKYFSQTNAWSYSATLLKWWLEVFLPFVRRFTHEPVLLLMDGCSSHSDLVDDRERVTVKTYPPLCTAVHQPMGFAVIAKTKVNYRKEA-HVKTSTMLVADTLRAQTKARKMKAGTMGLAQGHQPHVRDAAELLSKAWASVTAQDIARCFVKAETLPEEMGAELTKQHGKTRFNVAEPDLXVCHWVRLTSLLHPNTDTSKFLRYLARCFVKAETLPEEMGAELTKQHGKTRFNVAEPDLKALAETVNTLSTSVQDAQKQGSRVVNEEISELLAKLNIEPGKPVAGEAVAAIQGRATIEDDEEVVEALRLDAVEDMKALLAGTNLSTGGDDEEDEQ--DLGRGGENTGRE--RRAPRAPPGY 570          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21.5476.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNH6_9PHAE1.260e-21647.89Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KD82_9PHAE4.370e-16848.88HTH CENPB-type domain-containing protein n=2 Tax=E... [more]
A0A6H5L4D9_9PHAE2.240e-16447.79DDE-1 domain-containing protein n=8 Tax=Ectocarpus... [more]
A0A6H5J7S2_9PHAE2.800e-16142.61HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5J9E2_9PHAE3.550e-14949.60DDE-1 domain-containing protein (Fragment) n=2 Tax... [more]
A0A6H5KUT5_9PHAE6.820e-14948.63DDE-1 domain-containing protein n=4 Tax=Ectocarpus... [more]
A0A6H5JP23_9PHAE4.040e-14348.63DDE-1 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5K1S6_9PHAE7.640e-14144.61DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JMF1_9PHAE1.690e-12343.59DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JH32_9PHAE2.950e-12241.99HTH CENPB-type domain-containing protein n=1 Tax=E... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21contigH-paniculata_contig21:5287..10598 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score229.6
Seed ortholog evalue4.7e-57
Seed eggNOG ortholog6669.EFX68856
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Jerky protein homolog-like
EggNOG OGs38HJW@33154,3BCG5@33208,3CXR0@33213,420II@6656,KOG3105@1,KOG3105@2759
COG Functional cat.BD
Best tax levelArthropoda
Best eggNOG OGNA|NA|NA
Exons3
Model size2882
Cds size2127
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21.5476.1prot_H-paniculata_contig21.5476.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig21 5961..10517 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929553.6846652-UTR-H-paniculata_contig21:5286..59601622929553.6846652-UTR-H-paniculata_contig21:5286..5960Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig21 5287..5960 -
1691480910.9570122-UTR-H-paniculata_contig21:5286..59601691480910.9570122-UTR-H-paniculata_contig21:5286..5960Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig21 5287..5960 -
1622929553.737037-UTR-H-paniculata_contig21:10517..105981622929553.737037-UTR-H-paniculata_contig21:10517..10598Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig21 10518..10598 -
1691480911.0043337-UTR-H-paniculata_contig21:10517..105981691480911.0043337-UTR-H-paniculata_contig21:10517..10598Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig21 10518..10598 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929553.7000015-CDS-H-paniculata_contig21:5960..65791622929553.7000015-CDS-H-paniculata_contig21:5960..6579Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21 5961..6579 -
1691480910.9689255-CDS-H-paniculata_contig21:5960..65791691480910.9689255-CDS-H-paniculata_contig21:5960..6579Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21 5961..6579 -
1622929553.7146568-CDS-H-paniculata_contig21:7634..86081622929553.7146568-CDS-H-paniculata_contig21:7634..8608Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21 7635..8608 -
1691480910.9796221-CDS-H-paniculata_contig21:7634..86081691480910.9796221-CDS-H-paniculata_contig21:7634..8608Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21 7635..8608 -
1622929553.7261293-CDS-H-paniculata_contig21:9983..105171622929553.7261293-CDS-H-paniculata_contig21:9983..10517Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21 9984..10517 -
1691480910.9943502-CDS-H-paniculata_contig21:9983..105171691480910.9943502-CDS-H-paniculata_contig21:9983..10517Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21 9984..10517 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig21.5476.1

>prot_H-paniculata_contig21.5476.1 ID=prot_H-paniculata_contig21.5476.1|Name=mRNA_H-paniculata_contig21.5476.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=709bp
MPCAAGELCHIPDRTPESQNAHECRGGCGGRLHGLCGEVQEQVSDNLIHR
ICPSCLERDRKAFTVAATTAAACSSSSGTKRKIGTTGHSEDVNVKKSKPH
TPGGASGKSRVRLSHGQKMDVLGLLKERVSHAQIAHRFGCGERTVSNIAQ
QRKKLEEEDKLAGCDQSAKSRRRGYFPKVDDRVLSLVEEARKVGLPVTRA
VIQSFGHAAKKAVLEEATTTQDETKRLEAFGASVKWAKNFVSRNGMPSHA
LRGEAGNVDTAAIEKGLKEIRKVCEKYSLRNVFNVDKTILFYKVLPRITY
LAESGTRKTTRGAKDMEDEDRISAYMCTNATGTAKVDMSIIGKSEYPRCF
RWEKTPVKYFSQNNAWSDGPTFRKWWLEVFLPFVRRWTHEPVLLLINGSL
SYGGMEDPTRQVTVMMYPPNCASKHQPMGLGIIATTKVYYRSRLLSLRAS
TVTGAETLRAQSKDRKMVAGTVGLAEGHSPHMLDAAELLHSAWGDVTEHT
IARCWIKAETLPVTYQAILAQESGKYLGHDAQDAVREKLMEALNALSVGV
HSAAQSPSIAGEELCEVLADLEIVPGEPANEAAVKMAQAWAGLEEQEEIA
AALKLDSVDVLTEAANNISEDQSNPSDEKVEENNRGGLEGARVGIRAGLI
PPPSYAELGQFFGPLEKVAASCGNDEAGDWLRKAKMSFIAEYSSHRTRQA
GFGEYAQE*
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mRNA from alignment at H-paniculata_contig21:5287..10598-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig21.5476.1 ID=mRNA_H-paniculata_contig21.5476.1|Name=mRNA_H-paniculata_contig21.5476.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5312bp|location=Sequence derived from alignment at H-paniculata_contig21:5287..10598- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAATTGCCAAATCTCTCACCAGCATATCGAGCACCATAGGAACAGCACTA CAACAGTGTCCGATTACTGCTGCCACACATCATGCCATGTGCTGCAGGGG AACTATGCCACATTCCAGATCGCACGCCTGAATCTCAGAATGCCCACGAA TGCCGTGGAGGATGCGGTGGCCGCCTACATGGTTTGTGTGGTGAAGTCCA GGAGCAAGTCAGCGACAATCTAATTCATCGTATCTGCCCCTCATGCCTAG AGAGGGATAGGAAGGCTTTTACTGTTGCTGCTACTACTGCTGCTGCTTGT AGTTCGTCGAGCGGAACGAAGCGCAAGATAGGCACGACTGGCCACAGCGA GGATGTCAATGTGAAGAAATCGAAACCTCACACTCCCGGTGGAGCCAGCG GGAAGAGCCGCGTGCGGCTCAGTCATGGGCAGAAGATGGACGTGCTTGGG CTGTTAAAGGAGAGAGTATCTCACGCGCAGATAGCGCATCGCTTTGGCTG CGGTGAGCGGACGGTGTCGAATATTGCCCAGCAGAGGAAGAAGCTGGAGG AGGAGGACAAGTTGGCTGGATGCGACCAATCAGCGAAAAGCAGACGAAGG GGATATTTTCCCAAGGTAGCGCTTATAGATATACGCTATAATGTACGTAT CTGCATGTGGTGTACGTGCTCTTATCTGAGTAGGTTGTGTAAATTCTGCA GGTTAAAAAAACCTGTATCGACAATGCAGTATTATTCCGAGAATAACGGT TACGATGAGATACTTGAGGGTAGGGAATGGCTGCACCATGCCATATGATA TTTATTGTACTGTTTCTATTGCTCATTGTGATCTCATCTAGAATCTTGGA ATGTGTTGTATTTTTATCGTGTGTTCACTTTCTGTGAAGCAACGGCAGTC TGGAGTTGTGCTTGTTGTCGGTACTGCAGTGTGAAAAAAGTTCAGGACGG TGGGTATCTTGCGAGAGCAGAAAAGTTTGACACGCGATATTCGTCGCATT GACTACAGTGCGGTACCGCACTATGCCGAACCATATCCCCGTATAGTGCT CGACCGCACTGCGCAGGACATATCATGTACTATACAGGTCATTTTCCCAG CCCTTTGTATCAAACCATTATGGAAACCGTGAGAAGGGAGGGCCCAGCCT GGCATCAGCACTTTTTTTCAACAGCGGTACGCCTACGCGCAGCAGTGTCT TTAACCGACACCCATGGACAAGTGAATGACATACTCATGTGTTTTGACTC ATGCGAAGTATGAACTGATTGTCTCCCTGTTGGTCCAAATTCGCTTGCCT CGAATCGTACACGGCGTCTTAGATGGCATCAAAGGTACACACTGATTGTA CATAATAAATCAGACGATAACCGAGTGGTGTTTTCTGAAACCTCTGTGTA ATACATGCACCTAAATATCTTGCTTGCAATATTCTGAACGTGGCACACGC GTGGCCTGCATAGCATATCTTCCACACCCCGAGCAACCGCTGCGGTCCTA CATCACACCACAGCAACACCCCCCCTACGCATCCGAAAAAGCCTAATGTA CAGCTCAGGGAATGTCGGTGCTCAGTGGACTGCAGTCGAAAGGGAAAAAC TGCATCTGTATATCGCGGTAATCGCAATATTGTGGGGGCCCCTGCATAGC ACGGCAGCCGCACTGCGGTGGCTTGGAGTAGTGACAAGCAATTTTGACCG CACTGTGGGGAGACCCCGAACTATGATGGACCGCACAGAGGTGGGACCCC CGCTTTAGAGTATATATGGTCTACTCGGCTGTACAGCACATATAGTATAA AACGTCAGACCTAACTCAACACGGCAGCGACTACATAGCCGTAGTTGGTG AGACCGAGTAGTCGGTGACTCTGGGCCACATGTAGATATGTAGAAATTAC CATTTTCAGAAAAGGGTATGTTATGTTCTCATTTTTTTTCTCTGTAGGGT ATTTAATCTCTGCACAAATGCTGTTCCCCCAACGGTTTAGGTGGATGACC GCGTGCTGTCCCTTGTGGAGGAGGCCAGAAAGGTTGGGCTACCGGTTACA CGCGCCGTTATCCAGTCATTCGGACACGCAGCCAAGAAGGCTGTGCTCGA AGAAGCCACAACAACTCAAGACGAAACGAAGAGGCTCGAAGCATTCGGGG CGAGCGTAAAGTGGGCCAAGAACTTCGTCTCTCGCAACGGCATGCCCAGC CACGCGCTGCGCGGCGAAGCTGGCAACGTTGATACCGCGGCCATCGAAAA GGGTTTAAAAGAAATCCGAAAGGTTTGCGAGAAGTACAGCTTGCGGAACG TGTTCAACGTCGATAAGACAATCCTGTTCTACAAGGTGTTGCCGAGGATT ACGTACCTTGCCGAAAGTGGGACCCGGAAGACTACGAGGGGCGCCAAAGA CATGGAGGACGAGGATCGCATATCTGCCTACATGTGTACCAACGCCACTG GCACTGCCAAGGTGGATATGTCCATCATCGGAAAATCCGAATACCCTCGC TGCTTTCGTTGGGAAAAAACGCCGGTCAAGTACTTCTCCCAGAACAACGC GTGGTCGGATGGCCCCACCTTCAGGAAATGGTGGTTAGAGGTTTTCCTTC CCTTCGTGCGGCGGTGGACCCATGAACCTGTGCTGCTCCTGATTAATGGC TCCTTGTCGTATGGTGGGATGGAGGACCCCACGCGGCAGGTCACAGTGAT GATGTACCCCCCAAACTGCGCGAGCAAGCACCAGCCGATGGGTTTGGGCA TCATCGCGACCACCAAGGTTTACTACAGGAGCAGACTGCTTAGCCTTCGG GCGTCGACCGTGACAGGGGCAGAGACCCTGCGAGCTCAATCGAAGGATCG TAAGATGGTCGCTGGCACAGTAGGGTTGGCGGAGGGCCACTCCCCCCACA TGCTGGACGCCGCCGAGCTGCTACACTCGGCATGGGGGGACGTCACTGAG CACACCATCGCCAGGTGCGTACGTGTTTGCAGTCGTTTGCGTCAGCAGGC ATTTGAGCGCATTCACCAGTAAGTGCAGTGCAGCTTAATACAGTATCTAG TACAGTACCTCACCTTGGCTCCCTAACCTTTGGCACACGAGTCTGTATAC TTCCTCTGTGCCATGGCAGATCGTATGTCTAGACCTAGAATTTTTCAATG GCTGCCGTTGGAATCGTTGGAAAACTAAGATTAACGGCCGCTCGAGGTTA GGCCTATTTAAACCATTTTCAAGTTGTTACCGATTTCCATGTTTTTCTAT TGGAAAAGGAGCAAAAGGAGCAAAAAGCGACATTTTTTCGGCCGACATTC TTTCATTCCGCTGCGCTTGCACCCGATGGGCTTTGCCAGTTTTCGTGAAA TGTTGGGGATCAATTCCAATACGTAGGGCTATAACGAGAAAAGAAAATCG GAGATTGATACTTGACTCTATAAAGTCAACCAGTGTTACTTACGGCACAG AAAGTATGACGAAGATTGGGTACTCGTGGCCGTTTCAGACGTAGCCGTTT TTCTTGTCCCATATGTTTTCCATTCTCGTTTTTTCCCGGACAAACTCAAA AGTAGCATTTTTTGCATGGTGTTCCTCAATCCTATGAGTCATAGAAAAAA ATTGTTGACTAAAGGAACAACGTTTTCTCAAGAAGTCGTGTGATTACTCG TGCTGTCATGGGTCGGACTGCGACTACTGTGGCGGGCTACCAGCTTCTTT GTGGGTACCATCACACATAACATGACCCAATACATGCAGCGGCTATCGCT TACTGGGGAACTCCGGACTCTCATGAGATGTTGCTACTTCAGCACGACTG GGCAGATAGATATGCTATGTTGTAGCGGTACACGAACTGTTGCATGCTGA TGCGTTTACGCAGGCTTGGGGTACAATCCCGAGCTACAAACCCTCAGTTC AACAGTAACGCAGTTTTGAGATCCAGGCCACACATGTACCAGCGTAATGT GTACTTGCCTGTATAATAGACACAAAAAACTAAACACCTTTTCCTCCTCT GCTCCTCGCACGCGGACAGGTGCTGGATAAAGGCCGAAACGCTTCCTGTT ACATACCAGGCAATATTAGCACAAGAGTCAGGAAAATATTTGGGACACGA CGCCCAAGACGCTGTGCGAGAGAAGTTGATGGAGGCCCTCAACGCGTTGA GCGTGGGTGTGCACAGTGCGGCACAGAGCCCCAGCATAGCAGGCGAAGAG TTGTGCGAGGTGTTAGCAGACCTTGAGATCGTCCCGGGAGAGCCAGCCAA CGAGGCCGCTGTTAAGATGGCTCAGGCTTGGGCAGGGTTGGAGGAACAAG AGGAGATTGCAGCAGCTCTGAAACTGGACTCGGTAGATGTGTTGACGGAG GCAGCGAACAACATATCGGAGGACCAGTCCAACCCTTCTGATGAGAAAGT AGAGGAAAATAATAGAGGAGGACTTGAGGGCGCCCGAGTAGGGATACGAG CAGGGTTGATCCCGCCACCGTCTTACGCCGAACTGGGCCAGTTCTTCGGC CCGCTCGAAAAAGTCGCGGCGTCTTGTGGAAATGATGAAGCTGGGGATTG GTTACGCAAGGCCAAGATGTCGTTCATAGCTGAGTACTCCTCTCACCGAA CGCGGCAGGCAGGCTTTGGGGAATATGCGCAAGAATAGTTGTAACGAGGG TGTACTACAGACAACCCACCATGAGCCCAAGGATGCTGTGTTTGGGGGAG CTCTGCTGGTATGTATTGTGCACAATGTGCAAAATATGTATGTCTGTCTC GGTGGGATTCACGATAATCGGTACATTTGTCTAAAAATATATGATGTACA GTAAAGTATGGTGCTAACGTGTGGCGAAGGACGGAATTTGAGAAACGAGA CGATTCATAAATTATGGACACGGACAATACTAAGTAGGAAAACACGTACA ATAATTCGGCTGGCTTACAGCCCATTTTGTATGCCACAGCACCATACGGA GATATGGTCCGATGCCGTGTGGTACAGTATCAGCGCAGATGTACGATCGA GCGTCATTTTCATTTCTTTATTTGCTTCCTCTTTTTTTTCTTTTGTTTTT GGAATCATGAAAAATTGAAAATAGCCACGTGTATGTGACTTTCAGTTTGT TAAAAACTGATCTCTATCAATGGGTTGATTGCTATTCGTTGGCCCCCTTC ACATTAGGTTTAAGAGTCGGGAAATGAGTGCCTAATATGTCCGGATTAAT AACTGGGGTTTAGTGTTGGGAAATGTTCGCCTTCACTACTGGGTTATCAC CAGATGTCCGCGAATACGGTCGATAAAATGCCAACGCACGCGCTGGTACT GAGCCAACGGGC
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Coding sequence (CDS) from alignment at H-paniculata_contig21:5287..10598-

>mRNA_H-paniculata_contig21.5476.1 ID=mRNA_H-paniculata_contig21.5476.1|Name=mRNA_H-paniculata_contig21.5476.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4254bp|location=Sequence derived from alignment at H-paniculata_contig21:5287..10598- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCATGTGCTGCAGGGGAACTATGCCACATTCCAGATCGCACGCCTGA
ATCTCAGAATGCCCACGAATGCCGTGGAGGATGCGGTGGCCGCCTACATG
GTTTGTGTGGTGAAGTCCAGGAGCAAGTCAGCGACAATCTAATTCATCGT
ATCTGCCCCTCATGCCTAGAGAGGGATAGGAAGGCTTTTACTGTTGCTGC
TACTACTGCTGCTGCTTGTAGTTCGTCGAGCGGAACGAAGCGCAAGATAG
GCACGACTGGCCACAGCGAGGATGTCAATGTGAAGAAATCGAAACCTCAC
ACTCCCGGTGGAGCCAGCGGGAAGAGCCGCGTGCGGCTCAGTCATGGGCA
GAAGATGGACGTGCTTGGGCTGTTAAAGGAGAGAGTATCTCACGCGCAGA
TAGCGCATCGCTTTGGCTGCGGTGAGCGGACGGTGTCGAATATTGCCCAG
CAGAGGAAGAAGCTGGAGGAGGAGGACAAGTTGGCTGGATGCGACCAATC
AGCGAAAAGCAGACGAAGGGGATATTTTCCCAAGATGCCATGTGCTGCAG
GGGAACTATGCCACATTCCAGATCGCACGCCTGAATCTCAGAATGCCCAC
GAATGCCGTGGAGGATGCGGTGGCCGCCTACATGGTTTGTGTGGTGAAGT
CCAGGAGCAAGTCAGCGACAATCTAATTCATCGTATCTGCCCCTCATGCC
TAGAGAGGGATAGGAAGGCTTTTACTGTTGCTGCTACTACTGCTGCTGCT
TGTAGTTCGTCGAGCGGAACGAAGCGCAAGATAGGCACGACTGGCCACAG
CGAGGATGTCAATGTGAAGAAATCGAAACCTCACACTCCCGGTGGAGCCA
GCGGGAAGAGCCGCGTGCGGCTCAGTCATGGGCAGAAGATGGACGTGCTT
GGGCTGTTAAAGGAGAGAGTATCTCACGCGCAGATAGCGCATCGCTTTGG
CTGCGGTGAGCGGACGGTGTCGAATATTGCCCAGCAGAGGAAGAAGCTGG
AGGAGGAGGACAAGTTGGCTGGATGCGACCAATCAGCGAAAAGCAGACGA
AGGGGATATTTTCCCAAGGTGGATGACCGCGTGCTGTCCCTTGTGGAGGA
GGCCAGAAAGGTTGGGCTACCGGTTACACGCGCCGTTATCCAGTCATTCG
GACACGCAGCCAAGAAGGCTGTGCTCGAAGAAGCCACAACAACTCAAGAC
GAAACGAAGAGGCTCGAAGCATTCGGGGCGAGCGTAAAGTGGGCCAAGAA
CTTCGTCTCTCGCAACGGCATGCCCAGCCACGCGCTGCGCGGCGAAGCTG
GCAACGTTGATACCGCGGCCATCGAAAAGGGTTTAAAAGAAATCCGAAAG
GTTTGCGAGAAGTACAGCTTGCGGAACGTGTTCAACGTCGATAAGACAAT
CCTGTTCTACAAGGTGTTGCCGAGGATTACGTACCTTGCCGAAAGTGGGA
CCCGGAAGACTACGAGGGGCGCCAAAGACATGGAGGACGAGGATCGCATA
TCTGCCTACATGTGTACCAACGCCACTGGCACTGCCAAGGTGGATATGTC
CATCATCGGAAAATCCGAATACCCTCGCTGCTTTCGTTGGGAAAAAACGC
CGGTCAAGTACTTCTCCCAGAACAACGCGTGGTCGGATGGCCCCACCTTC
AGGAAATGGTGGTTAGAGGTTTTCCTTCCCTTCGTGCGGCGGTGGACCCA
TGAACCTGTGCTGCTCCTGATTAATGGCTCCTTGTCGTATGGTGGGATGG
AGGACCCCACGCGGCAGGTCACAGTGATGATGTACCCCCCAAACTGCGCG
AGCAAGCACCAGCCGATGGGTTTGGGCATCATCGCGACCACCAAGGTTTA
CTACAGGAGCAGACTGCTTAGCCTTCGGGCGTCGACCGTGACAGGGGCAG
AGACCCTGCGAGCTCAATCGAAGGATCGTAAGATGGTCGCTGGCACAGTA
GGGTTGGCGGAGGGCCACTCCCCCCACATGCTGGACGCCGCCGAGCTGCT
ACACTCGGCATGGGGGGACGTCACTGAGCACACCATCGCCAGGTGGATGA
CCGCGTGCTGTCCCTTGTGGAGGAGGCCAGAAAGGTTGGGCTACCGGTTA
CACGCGCCGTTATCCAGTCATTCGGACACGCAGCCAAGAAGGCTGTGCTC
GAAGAAGCCACAACAACTCAAGACGAAACGAAGAGGCTCGAAGCATTCGG
GGCGAGCGTAAAGTGGGCCAAGAACTTCGTCTCTCGCAACGGCATGCCCA
GCCACGCGCTGCGCGGCGAAGCTGGCAACGTTGATACCGCGGCCATCGAA
AAGGGTTTAAAAGAAATCCGAAAGGTTTGCGAGAAGTACAGCTTGCGGAA
CGTGTTCAACGTCGATAAGACAATCCTGTTCTACAAGGTGTTGCCGAGGA
TTACGTACCTTGCCGAAAGTGGGACCCGGAAGACTACGAGGGGCGCCAAA
GACATGGAGGACGAGGATCGCATATCTGCCTACATGTGTACCAACGCCAC
TGGCACTGCCAAGGTGGATATGTCCATCATCGGAAAATCCGAATACCCTC
GCTGCTTTCGTTGGGAAAAAACGCCGGTCAAGTACTTCTCCCAGAACAAC
GCGTGGTCGGATGGCCCCACCTTCAGGAAATGGTGGTTAGAGGTTTTCCT
TCCCTTCGTGCGGCGGTGGACCCATGAACCTGTGCTGCTCCTGATTAATG
GCTCCTTGTCGTATGGTGGGATGGAGGACCCCACGCGGCAGGTCACAGTG
ATGATGTACCCCCCAAACTGCGCGAGCAAGCACCAGCCGATGGGTTTGGG
CATCATCGCGACCACCAAGGTTTACTACAGGAGCAGACTGCTTAGCCTTC
GGGCGTCGACCGTGACAGGGGCAGAGACCCTGCGAGCTCAATCGAAGGAT
CGTAAGATGGTCGCTGGCACAGTAGGGTTGGCGGAGGGCCACTCCCCCCA
CATGCTGGACGCCGCCGAGCTGCTACACTCGGCATGGGGGGACGTCACTG
AGCACACCATCGCCAGGTGCTGGATAAAGGCCGAAACGCTTCCTGTTACA
TACCAGGCAATATTAGCACAAGAGTCAGGAAAATATTTGGGACACGACGC
CCAAGACGCTGTGCGAGAGAAGTTGATGGAGGCCCTCAACGCGTTGAGCG
TGGGTGTGCACAGTGCGGCACAGAGCCCCAGCATAGCAGGCGAAGAGTTG
TGCGAGGTGTTAGCAGACCTTGAGATCGTCCCGGGAGAGCCAGCCAACGA
GGCCGCTGTTAAGATGGCTCAGGCTTGGGCAGGGTTGGAGGAACAAGAGG
AGATTGCAGCAGCTCTGAAACTGGACTCGGTAGATGTGTTGACGGAGGCA
GCGAACAACATATCGGAGGACCAGTCCAACCCTTCTGATGAGAAAGTAGA
GGAAAATAATAGAGGAGGACTTGAGGGCGCCCGAGTAGGGATACGAGCAG
GGTTGATCCCGCCACCGTCTTACGCCGAACTGGGCCAGTTCTTCGGCCCG
CTCGAAAAAGTCGCGGCGTCTTGTGGAAATGATGAAGCTGGGGATTGGTT
ACGCAAGGCCAAGATGTCGTTCATAGCTGAGTACTCCTCTCACCGAACGC
GGCAGGCAGGCTTTGGGGAATATGCGCAAGAATAGGTGCTGGATAAAGGC
CGAAACGCTTCCTGTTACATACCAGGCAATATTAGCACAAGAGTCAGGAA
AATATTTGGGACACGACGCCCAAGACGCTGTGCGAGAGAAGTTGATGGAG
GCCCTCAACGCGTTGAGCGTGGGTGTGCACAGTGCGGCACAGAGCCCCAG
CATAGCAGGCGAAGAGTTGTGCGAGGTGTTAGCAGACCTTGAGATCGTCC
CGGGAGAGCCAGCCAACGAGGCCGCTGTTAAGATGGCTCAGGCTTGGGCA
GGGTTGGAGGAACAAGAGGAGATTGCAGCAGCTCTGAAACTGGACTCGGT
AGATGTGTTGACGGAGGCAGCGAACAACATATCGGAGGACCAGTCCAACC
CTTCTGATGAGAAAGTAGAGGAAAATAATAGAGGAGGACTTGAGGGCGCC
CGAGTAGGGATACGAGCAGGGTTGATCCCGCCACCGTCTTACGCCGAACT
GGGCCAGTTCTTCGGCCCGCTCGAAAAAGTCGCGGCGTCTTGTGGAAATG
ATGAAGCTGGGGATTGGTTACGCAAGGCCAAGATGTCGTTCATAGCTGAG
TACTCCTCTCACCGAACGCGGCAGGCAGGCTTTGGGGAATATGCGCAAGA
ATAG
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