mRNA_H-paniculata_contig20994.5471.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig20994.5471.1 vs. uniprot
Match: A0A2D0N725_9BACT (Uncharacterized protein n=1 Tax=Flavilitoribacter nigricans DSM 23189 = NBRC 102662 TaxID=1122177 RepID=A0A2D0N725_9BACT) HSP 1 Score: 64.3 bits (155), Expect = 1.430e-10 Identity = 27/47 (57.45%), Postives = 33/47 (70.21%), Query Frame = 1
Query: 13 LYWATGGPEWVNSWDLEADIDKWWGVEINEDEGCVVSLSLENNNLRG 153
LY +T GP W SWDL A I+ W+GVE+NE +GCV S+ L NNL G
Sbjct: 986 LYQSTNGPSWKTSWDLNAPINSWYGVELNE-QGCVTSIQLLGNNLSG 1031
BLAST of mRNA_H-paniculata_contig20994.5471.1 vs. uniprot
Match: A0A2U2X9J1_9FLAO (Two component regulator three Y domain protein n=1 Tax=Algibacter marinivivus TaxID=2100723 RepID=A0A2U2X9J1_9FLAO) HSP 1 Score: 63.2 bits (152), Expect = 2.380e-10 Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 1
Query: 1 ALHALYWATGGPEWVNSWDLEADIDKWWGVEINEDEGCVVSLSLENNNLRGK 156
AL ALY AT G EW +SWDL A +DKW+GV+I D+ VV ++L+ NNL G+
Sbjct: 28 ALIALYNATNGAEWNSSWDLNASVDKWYGVKIENDK--VVEINLQFNNLNGE 77
BLAST of mRNA_H-paniculata_contig20994.5471.1 vs. uniprot
Match: A0A2K1E1B7_9FLAO (Two component regulator three Y domain protein n=1 Tax=Hanstruepera neustonica TaxID=1445657 RepID=A0A2K1E1B7_9FLAO) HSP 1 Score: 62.0 bits (149), Expect = 6.200e-10 Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 1
Query: 1 ALHALYWATGGPEWVNSWDLEADIDKWWGVEINEDEGCVVSLSLENNNLRGK--GELG 168
AL ALY +T G EWVN+WDL A I+ W+GV D+ VV+L+LE NNL+G ELG
Sbjct: 28 ALIALYNSTNGDEWVNTWDLNASINTWYGVTTENDQ--VVALNLEFNNLQGSLPEELG 83
BLAST of mRNA_H-paniculata_contig20994.5471.1 vs. uniprot
Match: UPI001F55DA33 (Two component regulator three Y domain protein n=1 Tax=Aestuariivivens sp. AH-MY3 TaxID=2913554 RepID=UPI001F55DA33) HSP 1 Score: 62.0 bits (149), Expect = 6.530e-10 Identity = 29/51 (56.86%), Postives = 36/51 (70.59%), Query Frame = 1
Query: 1 ALHALYWATGGPEWVNSWDLEADIDKWWGVEINEDEGCVVSLSLENNNLRG 153
AL ALY A G EW SWDLEA ID W+GV++ +D+ VV L+L NNL+G
Sbjct: 28 ALIALYKAANGSEWSTSWDLEASIDTWYGVKVQDDK--VVELNLHFNNLQG 76
BLAST of mRNA_H-paniculata_contig20994.5471.1 vs. uniprot
Match: UPI001BCFDF7F (Two component regulator three Y domain protein n=1 Tax=Flavobacterium sp. CYK-55 TaxID=2835529 RepID=UPI001BCFDF7F) HSP 1 Score: 60.8 bits (146), Expect = 1.770e-9 Identity = 28/58 (48.28%), Postives = 40/58 (68.97%), Query Frame = 1
Query: 1 ALHALYWATGGPEWVNSWDLEADIDKWWGVEINEDEGCVVSLSLENNNLRGK--GELG 168
AL LY +T G +W N WDL A ++KW+GV++N D+ V++L L NNNL G+ E+G
Sbjct: 28 ALVKLYISTNGTQWKNKWDLNAPVNKWFGVKMNGDK--VIALDLSNNNLTGQLPAEIG 83
BLAST of mRNA_H-paniculata_contig20994.5471.1 vs. uniprot
Match: A0A5D0RBG1_9FLAO (Two component regulator three Y domain protein n=1 Tax=Bizionia myxarmorum TaxID=291186 RepID=A0A5D0RBG1_9FLAO) HSP 1 Score: 60.5 bits (145), Expect = 1.900e-9 Identity = 31/58 (53.45%), Postives = 38/58 (65.52%), Query Frame = 1
Query: 1 ALHALYWATGGPEWVNSWDLEADIDKWWGVEINEDEGCVVSLSLENNNLRGK--GELG 168
AL ALY AT G +W N+WDL A I W+GV + ++ VV LSLE NNL+G ELG
Sbjct: 28 ALIALYNATNGAQWTNTWDLNAPIQNWYGVTVKNNQ--VVGLSLEFNNLQGSLPQELG 83
BLAST of mRNA_H-paniculata_contig20994.5471.1 vs. uniprot
Match: UPI000CF13B4C (Two component regulator three Y domain protein n=2 Tax=Hanstruepera ponticola TaxID=2042995 RepID=UPI000CF13B4C) HSP 1 Score: 60.5 bits (145), Expect = 2.280e-9 Identity = 28/51 (54.90%), Postives = 38/51 (74.51%), Query Frame = 1
Query: 1 ALHALYWATGGPEWVNSWDLEADIDKWWGVEINEDEGCVVSLSLENNNLRG 153
AL ALY AT G +WVN+WDL I+ W+GV + E++ VV+L+LE NNL+G
Sbjct: 28 ALLALYNATKGDQWVNTWDLSTPINTWYGVTVEENQ--VVALNLEFNNLQG 76
BLAST of mRNA_H-paniculata_contig20994.5471.1 vs. uniprot
Match: UPI001269B135 (hypothetical protein n=1 Tax=Phaeodactylibacter xiamenensis TaxID=1524460 RepID=UPI001269B135) HSP 1 Score: 60.1 bits (144), Expect = 3.210e-9 Identity = 27/57 (47.37%), Postives = 36/57 (63.16%), Query Frame = 1
Query: 1 ALHALYWATGGPEWVNSWDLEADIDKWWGVEINEDEGCVVSLSLENNNLRGKGELGI 171
AL ALY AT GP W N+WDL ++ W+GV I + EGCV + L N L G+ +G+
Sbjct: 102 ALVALYNATNGPTWTNTWDLSQPMESWFGV-ILDTEGCVQEIDLNYNGLTGEIPVGL 157
BLAST of mRNA_H-paniculata_contig20994.5471.1 vs. uniprot
Match: A0A2N3T4I5_9FLAO (Putative secreted protein (Por secretion system target) n=1 Tax=Aquimarina sp. MAR_2010_214 TaxID=1250026 RepID=A0A2N3T4I5_9FLAO) HSP 1 Score: 60.5 bits (145), Expect = 3.240e-9 Identity = 28/51 (54.90%), Postives = 35/51 (68.63%), Query Frame = 1
Query: 1 ALHALYWATGGPEWVNSWDLEADIDKWWGVEINEDEGCVVSLSLENNNLRG 153
AL ALY AT GP WVN WDL AD+ W GV +++ + V ++SL NNNL G
Sbjct: 462 ALIALYNATNGPNWVNPWDLTADVSTWHGVFLDDSKN-VQAISLTNNNLTG 511
BLAST of mRNA_H-paniculata_contig20994.5471.1 vs. uniprot
Match: A0A7C1LEF3_9FLAO (T9SS type A sorting domain-containing protein n=3 Tax=root TaxID=1 RepID=A0A7C1LEF3_9FLAO) HSP 1 Score: 60.1 bits (144), Expect = 4.430e-9 Identity = 32/60 (53.33%), Postives = 39/60 (65.00%), Query Frame = 1
Query: 1 ALHALYWATGGPEWVNSWDLEA-DIDKWWGVEINEDEGCVVSLSLENNNLRGK--GELGI 171
AL ALY ATGGP WVN+WDLE DI+ W+GV +N EG V L + N L G E+G+
Sbjct: 385 ALIALYNATGGPNWVNTWDLEEQDIENWYGVTLNS-EGRVEYLYITENKLTGTLPPEIGL 443 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20994.5471.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig20994.5471.1 >prot_H-paniculata_contig20994.5471.1 ID=prot_H-paniculata_contig20994.5471.1|Name=mRNA_H-paniculata_contig20994.5471.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=59bp ALHALYWATGGPEWVNSWDLEADIDKWWGVEINEDEGCVVSLSLENNNLRback to top mRNA from alignment at H-paniculata_contig20994:1848..2024- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig20994.5471.1 ID=mRNA_H-paniculata_contig20994.5471.1|Name=mRNA_H-paniculata_contig20994.5471.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=177bp|location=Sequence derived from alignment at H-paniculata_contig20994:1848..2024- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig20994:1848..2024- >mRNA_H-paniculata_contig20994.5471.1 ID=mRNA_H-paniculata_contig20994.5471.1|Name=mRNA_H-paniculata_contig20994.5471.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=354bp|location=Sequence derived from alignment at H-paniculata_contig20994:1848..2024- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |