mRNA_H-paniculata_contig2097.5462.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2097.5462.1 vs. uniprot
Match: A0A6H5JT97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT97_9PHAE) HSP 1 Score: 311 bits (796), Expect = 4.970e-100 Identity = 215/367 (58.58%), Postives = 243/367 (66.21%), Query Frame = 1
Query: 1 RFAWAIPDERALRIIKHFGPIVEIGSGLGYWAMLLRSRGVDVKAYDKVSGAPAGAKDQSSSNTNRDESHRQGLKKSKADKNTKSDVADVTADARSAETAEESVDPSPVFWTEVAKGGPEVLEEACNERRALFLCYPDDFEDEDESLGLQCLHSFEGDVVIHVGEVFGDSVSMTPGQTPWGRTSSRECQEELAIKFHCILKVPLPRWPHSRDTLTVWKRHSFSAVHYGHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGPGSNAKKRNPAANGELSDGDDXXXXXXXXXXXGSDGGIEAFFRGEL--------------GSDDGEEDVEGAISYLSDMDIYAFVPSDEEMSVVWAAPSVRFLLDPE 1059
RFAWAIPDERALRIIKHFGPIVEIGSGLGYWA LLR+RGVD+ AYDKV+G P A + D S +G SK D KS V + + E D +P FW +V +GGP+VLEE CNE R+LFLCYPDDFE E ESLGL+CLH+FEGDVVIHVGE+FGDSVSMTPGQ+PWGRT+S+ECQEELA KFHCILKVPLP WPHSRDTLTVWKRHSF ++ Y XXXXXXXXXXXXXXXXXXXXXXXXXXXXX + E + G GG +A G+ GSDD +EG + D+D+YAFVP DE M AAP RFLLD E
Sbjct: 80 RFAWAIPDERALRIIKHFGPIVEIGSGLGYWAKLLRARGVDINAYDKVAGTPDTA------SAAPDSSRTKGKSTSK-DAKVKSAAEGVVKE----DADEGGGDETPSFWIKVNEGGPDVLEEPCNEGRSLFLCYPDDFEGETESLGLRCLHAFEGDVVIHVGELFGDSVSMTPGQSPWGRTTSQECQEELASKFHCILKVPLPSWPHSRDTLTVWKRHSFCSIQYDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDREAN-------------GKGRKGGKKAEGSGKXXXXXXXXXXXXXSSGSDDFGS-IEGLPIGMLDVDMYAFVPEDETMPCAQAAPCARFLLDAE 421
BLAST of mRNA_H-paniculata_contig2097.5462.1 vs. uniprot
Match: D8LFK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK6_ECTSI) HSP 1 Score: 316 bits (810), Expect = 2.440e-94 Identity = 207/361 (57.34%), Postives = 232/361 (64.27%), Query Frame = 1
Query: 1 RFAWAIPDERALRIIKHFGPIVEIGSGLGYWAMLLRSRGVDVKAYDKVSGAPAGAKDQSSSNTNRDESHRQGLKKSKADKNTKSDVADVTADARSAETAEESVDPSPVFWTEVAKGGPEVLEEACNERRALFLCYPDDFEDEDESLGLQCLHSFEGDVVIHVGEVFGDSVSMTPGQTPWGRTSSRECQEELAIKFHCILKVPLPRWPHSRDTLTVWKRHSFSAVHYGHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGPGSNAKKRNPAANGELSDGDDXXXXXXXXXXXGSDGGIEAFF--------RGELGSDDGEEDVEGAISYLSDMDIYAFVPSDEEMSVVWAAPSVRFLLDPE 1059
RFAWAIPDERALRIIKHFGPIVE+GSGLGYWA LLR+RGVD+ YDKV+G P A + D S +G SK K + D DA E +P FW +V +GGP+VLEE CNE R+LFLCYPDDFE E ESLGL+CLH+FEGDVVIHVGE+FGDSVSMTPGQ+PWGRT+S+ECQEELA KFHCILKVPLP WPHSRDTLTVWKRHSF ++ Y D X XXXXXXXXXXXX PG K +P G DG XXXXX XXX R GSDD +EG + D+D+YAFVP DE M AAP RFLLD E
Sbjct: 81 RFAWAIPDERALRIIKHFGPIVEVGSGLGYWAKLLRARGVDINPYDKVAGTPDTA------SAAPDSSQTKGKSTSKDAKVKSAAEGDGKEDADEGGGGE-----APSFWIKVNEGGPDVLEEPCNEDRSLFLCYPDDFEGETESLGLRCLHAFEGDVVIHVGELFGDSVSMTPGQSPWGRTTSQECQEELASKFHCILKVPLPSWPHSRDTLTVWKRHSFCSIQYDDDDDSDXNEAXXXXXXXXXXXXAQGKE------PGEKGKNSSPK--GVSGDGHGXXXXXRKGXXXXXXXXXXXXXXXXXXXXXRSSSGSDDFGS-IEGLPIGMLDVDMYAFVPEDERMPCAQAAPCARFLLDAE 421
BLAST of mRNA_H-paniculata_contig2097.5462.1 vs. uniprot
Match: A0A0P1AKQ6_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AKQ6_PLAHL) HSP 1 Score: 182 bits (463), Expect = 3.030e-51 Identity = 110/232 (47.41%), Postives = 147/232 (63.36%), Query Frame = 1
Query: 1 RFAWAIPDERALRIIKHFGPIVEIGSGLGYWAMLLRSRGVDVKAYD-KVSGAPAG--AKDQSSSNTNRDESHRQGLKKSKADKNTKSDVADV-TADARSAETA----------EESVDPSPVFWTEVAKGGPEVLEEACNERRALFLCYPDDFEDEDESLGLQCLHSFEGDVVIHVGEVFGDSVSMTPGQTPWGRTSSRECQEELAIKFHCILKVPLPRWPHSRDTLTVWKR 654
+++WAIPDERAL+IIKH+GPIVE+G+G GYWA LL+ RGVDV AYD +V+G K N + R+ + + A +N ++ D+ D ++ ET E+ V+ V+WT V KG P+ L + N RALFLCYPDDFED ES+ ++ L ++ GD VIHVGE+FG ++ + PG WGRTSS E Q LA +H +L+VPLP W S DTLTVWKR
Sbjct: 55 KYSWAIPDERALQIIKHYGPIVEMGAGSGYWARLLQLRGVDVIAYDLRVAGEEEENEVKSDVKENGKSAATCREEINED-AQENNGEEILDIGEEDVKNGETDQLNEDEEFEDEQDVEVEQVYWTNVLKGTPKDLHKHTN--RALFLCYPDDFEDSHESMAMKSLCNYLGDTVIHVGELFGQTICL-PGV--WGRTSSEEFQIHLATVYHKVLQVPLPSWHSSIDTLTVWKR 280
BLAST of mRNA_H-paniculata_contig2097.5462.1 vs. uniprot
Match: A0A1V9YJ57_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YJ57_9STRA) HSP 1 Score: 181 bits (458), Expect = 3.720e-51 Identity = 96/218 (44.04%), Postives = 128/218 (58.72%), Query Frame = 1
Query: 1 RFAWAIPDERALRIIKHFGPIVEIGSGLGYWAMLLRSRGVDVKAYDKVSGAPAGAKDQSSSNTNRDESHRQGLKKSKADKNTKSDVADVTADARSAETAEESVDPSPVFWTEVAKGGPEVLEEACNERRALFLCYPDDFEDEDESLGLQCLHSFEGDVVIHVGEVFGDSVSMTPGQTPWGRTSSRECQEELAIKFHCILKVPLPRWPHSRDTLTVWKR 654
+++WAIPDERALRIIKH+GPIVE+G+G GYW LL+ RGVDVK +D AKD+S E+ + + W +V +G PEVL++ + +R L LCYPDDFED +ES+ L+CL+++ GD +IHVGE G +V + PWGRTS+ E Q +L+ FH +L+VPLP W S DTLTVWKR
Sbjct: 60 KYSWAIPDERALRIIKHYGPIVEMGAGSGYWGRLLQLRGVDVKCFDLHVPGTESAKDESDD--------------------------------------EDEAEEERMTWMDVQQGTPEVLKK--HSKRTLLLCYPDDFEDSEESMALECLNNYTGDTIIHVGEWLGQTVCLPE---PWGRTSAPEFQTQLSAVFHKVLQVPLPSWHSSIDTLTVWKR 234
BLAST of mRNA_H-paniculata_contig2097.5462.1 vs. uniprot
Match: A0A484EEF6_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EEF6_BRELC) HSP 1 Score: 181 bits (460), Expect = 6.640e-51 Identity = 105/223 (47.09%), Postives = 137/223 (61.43%), Query Frame = 1
Query: 1 RFAWAIPDERALRIIKHFGPIVEIGSGLGYWAMLLRSRGVDVKAYD-KVSGAPAGAKDQSSSNTNRDESHRQGLKKSKADKNTKSDVADVTADARSAETAE----ESVDPSPVFWTEVAKGGPEVLEEACNERRALFLCYPDDFEDEDESLGLQCLHSFEGDVVIHVGEVFGDSVSMTPGQTPWGRTSSRECQEELAIKFHCILKVPLPRWPHSRDTLTVWKR 654
+++WAIPDERAL+IIK FGPIVE+G+G GYWA LL+ R VD+ AYD +V+G DE ++ S + + + A V++D E E E VD + WT+V KG P+ L + N R LFLCYPDDFED ES+ + L ++EG VIHVGE+FG ++ + PWGRTSS E Q LA +H +L+VPLP W S DTLTVWKR
Sbjct: 56 KYSWAIPDERALQIIKSFGPIVEMGAGNGYWARLLQLRDVDIIAYDHRVAG---------------DEEEKEEKSISGEESDGVAHEASVSSDEEVIEDTENVNEEVVDVEQIIWTDVRKGTPKDLRKHTN--RTLFLCYPDDFEDSQESMAMASLCNYEGSFVIHVGELFGQTICLP---NPWGRTSSEEFQIHLATVYHKVLQVPLPSWHSSIDTLTVWKR 258
BLAST of mRNA_H-paniculata_contig2097.5462.1 vs. uniprot
Match: A0A024UED4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UED4_9STRA) HSP 1 Score: 179 bits (454), Expect = 1.940e-50 Identity = 105/220 (47.73%), Postives = 131/220 (59.55%), Query Frame = 1
Query: 1 RFAWAIPDERALRIIKHFGPIVEIGSGLGYWAMLLRSRGVDVKAYD-KVSGAPAGAKDQSSSNTNRDESHRQGLKKSKADKNTKSDVADVTADARSAETAEESVDPSP-VFWTEVAKGGPEVLEEACNERRALFLCYPDDFEDEDESLGLQCLHSFEGDVVIHVGEVFGDSVSMTPGQTPWGRTSSRECQEELAIKFHCILKVPLPRWPHSRDTLTVWKR 654
+++WAIPDERALRIIKH+GPIVEIG+G GYW LL+ RGVD+K +D V G D+S++ AD+ A E VD SP + W EV +G PEVL + N R L LCYPDD+ED DES+ CL+ + G+ VIH+GE+FG ++ + PWGRTSS E Q LA FH IL+VPL W S DTLTVWKR
Sbjct: 65 KYSWAIPDERALRIIKHYGPIVEIGAGTGYWGRLLQLRGVDIKCFDLHVPG------DESANG----------------------------ADSDDASDEERDVDDSPRMTWLEVEQGTPEVLTKHKN--RTLLLCYPDDYEDSDESMAEACLNYYTGEYVIHIGELFGHTLCLPE---PWGRTSSPEFQTRLAAVFHKILQVPLHSWHSSVDTLTVWKR 245
BLAST of mRNA_H-paniculata_contig2097.5462.1 vs. uniprot
Match: A0A329SPF0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SPF0_9STRA) HSP 1 Score: 180 bits (457), Expect = 5.980e-50 Identity = 109/234 (46.58%), Postives = 138/234 (58.97%), Query Frame = 1
Query: 1 RFAWAIPDERALRIIKHFGPIVEIGSGLGYWAMLLRSRGVDVKAYDKVSGAPAGAKDQSSSNTNRDESHRQGLKKSKADKNTKSDVADVTADARSAETAEES----------------VDPSPVFWTEVAKGGPEVLEEACNERRALFLCYPDDFEDEDESLGLQCLHSFEGDVVIHVGEVFGDSVSMTPGQTPWGRTSSRECQEELAIKFHCILKVPLPRWPHSRDTLTVWKR 654
+++WAIPDERAL+IIKH+GPIVE+G+G GYWA LL+ RGVDV AYD K++ S +S ++S D AD T + E E V+ V+WTEV KG P+ L + + RALFLCYPDDFED ES+ + L ++ GD VIHVGE+FG +V + PG WGRTSS E Q LA +H +L+VPLP W S DTLTVWKR
Sbjct: 58 KYSWAIPDERALQIIKHYGPIVEMGAGSGYWARLLQLRGVDVVAYDLHVAGDEEEKNEESDEKENGKSAATSGEESHGD-------ADETQVSDGGEADEXXXXXXXXXXXXXXXXXXVEVEQVYWTEVLKGTPKDLRKHAD--RALFLCYPDDFEDSHESMAMASLCNYAGDTVIHVGELFGQTVCL-PGA--WGRTSSEEFQTHLATVYHKVLQVPLPSWHSSIDTLTVWKR 279
BLAST of mRNA_H-paniculata_contig2097.5462.1 vs. uniprot
Match: W2R2M3_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora parasitica TaxID=4792 RepID=W2R2M3_PHYPN) HSP 1 Score: 179 bits (454), Expect = 1.660e-49 Identity = 108/238 (45.38%), Postives = 138/238 (57.98%), Query Frame = 1
Query: 1 RFAWAIPDERALRIIKHFGPIVEIGSGLGYWAMLLRSRGVDVKAYDKVSGAPAGAKDQSSSNTNRDESHRQGLKKSKADKNTKSDVADVTADARSAETAEE--------------------SVDPSPVFWTEVAKGGPEVLEEACNERRALFLCYPDDFEDEDESLGLQCLHSFEGDVVIHVGEVFGDSVSMTPGQTPWGRTSSRECQEELAIKFHCILKVPLPRWPHSRDTLTVWKR 654
+++WAIPDERAL+IIKH+GPIVE+G+G GYWA LL+ R VDV AYD G K+ S DE R+ K + T + + A+ EE V+ V+WTEV KG P+ L + + RALFLCYPDDFED ES+ + L ++ GD VIH+GE+FG +V + PG WGRTSS E Q LA +H +L+VPLP W S DTLTVWKR
Sbjct: 58 KYSWAIPDERALQIIKHYGPIVEMGAGSGYWARLLQLRSVDVVAYDLHVAGDEGEKEDES-----DEKERENAKIAA----TSGEESHGDAEEAQGSGGEEXXXXXXXXXXXXXXXXXXXXEVEVEQVYWTEVLKGTPKDLRKHAD--RALFLCYPDDFEDSHESMAMASLCNYAGDTVIHIGELFGQTVCL-PGA--WGRTSSEEFQTHLAAVYHKVLQVPLPSWHSSIDTLTVWKR 281
BLAST of mRNA_H-paniculata_contig2097.5462.1 vs. uniprot
Match: A0A1V9YVH9_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YVH9_9STRA) HSP 1 Score: 176 bits (445), Expect = 3.010e-49 Identity = 100/219 (45.66%), Postives = 127/219 (57.99%), Query Frame = 1
Query: 1 RFAWAIPDERALRIIKHFGPIVEIGSGLGYWAMLLRSRGVDVKAYD-KVSGAPAGAKDQSSSNTNRDESHRQGLKKSKADKNTKSDVADVTADARSAETAEESVDPSPVFWTEVAKGGPEVLEEACNERRALFLCYPDDFEDEDESLGLQCLHSFEGDVVIHVGEVFGDSVSMTPGQTPWGRTSSRECQEELAIKFHCILKVPLPRWPHSRDTLTVWKR 654
+++WAIPDERALRIIKH+GPIVE+G+G GYW LL+ RGVD+K +D V G G DV+D + +E V + W EV +G PEVL E + R L LCYPDDFED +ES+ L+CL ++ GD +IH+GE G +V + PWGRTS+ E Q LA FH +L+VPLP W S DTLTVWKR
Sbjct: 61 KYSWAIPDERALRIIKHYGPIVEMGAGSGYWGRLLQLRGVDIKCFDLHVPGEEKG------------------------------DVSDE-------DDEDEQVR---MTWMEVEQGTPEVLPEYKD--RTLLLCYPDDFEDSEESMALECLDNYTGDTIIHIGEWLGQTVCLPE---PWGRTSAPEFQTRLAAVFHKVLQVPLPSWHSSMDTLTVWKR 234
BLAST of mRNA_H-paniculata_contig2097.5462.1 vs. uniprot
Match: A0A833SKQ9_PHYIN (Uncharacterized protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SKQ9_PHYIN) HSP 1 Score: 176 bits (445), Expect = 3.500e-48 Identity = 108/233 (46.35%), Postives = 138/233 (59.23%), Query Frame = 1
Query: 1 RFAWAIPDERALRIIKHFGPIVEIGSGLGYWAMLLRSRGVDVKAYDKVSGAPAGAKDQS----------SSNTNRDESH-----RQGLKKSKADKNTKSDVADVTADARSAETAEESVDPSPVFWTEVAKGGPEVLEEACNERRALFLCYPDDFEDEDESLGLQCLHSFEGDVVIHVGEVFGDSVSMTPGQTPWGRTSSRECQEELAIKFHCILKVPLPRWPHSRDTLTVWKR 654
+++WAIPDERAL+IIKH+GPIVE+G+G GYWA LL+ RGVDV AYD K+Q ++ T+ +ESH QG +AD V+ V+WT+V KG P+ L + + RALFLCYPDDFED ES+ + L ++ GD VIHVGE+FG +V + PG WGRTSS E Q LA +H +L+VPLP W S DTLTVWKR
Sbjct: 58 KYSWAIPDERALQIIKHYGPIVEMGAGSGYWARLLQLRGVDVVAYDLHVAGEEEEKEQEXXXXXXXNGKTAATSGEESHGDAEETQGSGGEEADXX----XXXXXXXXXXXXXXXXXVEVEQVYWTDVLKGTPKDLRKHAD--RALFLCYPDDFEDSHESMAMASLCNYAGDTVIHVGELFGQTVCL-PGA--WGRTSSEEFQTHLATVYHKVLQVPLPSWHSSIDTLTVWKR 281 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2097.5462.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2097.5462.1 >prot_H-paniculata_contig2097.5462.1 ID=prot_H-paniculata_contig2097.5462.1|Name=mRNA_H-paniculata_contig2097.5462.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=355bp RFAWAIPDERALRIIKHFGPIVEIGSGLGYWAMLLRSRGVDVKAYDKVSGback to top mRNA from alignment at H-paniculata_contig2097:822..5067+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2097.5462.1 ID=mRNA_H-paniculata_contig2097.5462.1|Name=mRNA_H-paniculata_contig2097.5462.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4246bp|location=Sequence derived from alignment at H-paniculata_contig2097:822..5067+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2097:822..5067+ >mRNA_H-paniculata_contig2097.5462.1 ID=mRNA_H-paniculata_contig2097.5462.1|Name=mRNA_H-paniculata_contig2097.5462.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2130bp|location=Sequence derived from alignment at H-paniculata_contig2097:822..5067+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |