mRNA_H-paniculata_contig20899.5440.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig20899.5440.1 vs. uniprot
Match: D8LBM5_ECTSI (Similar to 20S proteasome alpha5 subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBM5_ECTSI) HSP 1 Score: 306 bits (784), Expect = 2.720e-97 Identity = 162/221 (73.30%), Postives = 188/221 (85.07%), Query Frame = 1
Query: 25 QVEYAVQAAEKGGLTIGVQTEEGLVLAAQGRRRSSLLKRESVSKIANIDTC-ISCAMSGLLPDGRFLVDFARSWVQEHRFEFDEAPSVEVVSSQLSKLCLKFNGYDKDGKNG-GGREEDDG--LAMSRPMGVAFLLAGLDRG-KPVLYHLDPSGAYVQWRAKAIGEKSAAAEAKLEDAGPYEKMTLRTAMSTVLRVLEGVLGND-FSVESVEMVCVDASCG 669
QVEYAV+AA+KGGLTIGVQT++GLVLAA GRRRS LLK SVSKIA++D + CAMSGLLPDGR L+D+AR+WVQEHRFEFDEAPSVE V+SQLS+L LKFNGYDKDGK G GGREE+DG AMSRP+GVA L+AG+DRG +PVLYHLDPSGAYVQWRA+AIG+K AAAEAKLE GP+E M++R AM+ VL VL VLG+D FS + +EMVCVD G
Sbjct: 51 QVEYAVEAADKGGLTIGVQTDKGLVLAAHGRRRSPLLKASSVSKIADVDDGRMCCAMSGLLPDGRLLLDYARTWVQEHRFEFDEAPSVEAVASQLSRLALKFNGYDKDGKAGNGGREEEDGGGPAMSRPVGVALLMAGVDRGDRPVLYHLDPSGAYVQWRARAIGDKGAAAEAKLEGVGPFEGMSVRRAMAAVLGVLREVLGDDEFSTDRLEMVCVDMMGG 271
BLAST of mRNA_H-paniculata_contig20899.5440.1 vs. uniprot
Match: E9HGR7_DAPPU (Proteasome subunit alpha type n=8 Tax=Mandibulata TaxID=197563 RepID=E9HGR7_DAPPU) HSP 1 Score: 171 bits (432), Expect = 4.350e-47 Identity = 97/214 (45.33%), Postives = 130/214 (60.75%), Query Frame = 1
Query: 16 RCRQVEYAVQAAEKGGLTIGVQTEEGLVLAAQGRRRSSLLKRESVSKIANIDTCISCAMSGLLPDGRFLVDFARSWVQEHRFEFDEAPSVEVVSSQLSKLCLKFNGYDKDGKNGGGREEDDGLAMSRPMGVAFLLAGLDRGKPVLYHLDPSGAYVQWRAKAIGEKSAAAEAKLEDAGPYEK-MTLRTAMSTVLRVLEGVLGNDFSVESVEMVCV 654
R QVEYA++A + G IG+QT EG+VLA + R S L++ ++ KI ID I CA+SGL+ D R +VD AR Q H F +DE SVE V+ +S L ++F G +DDG AMSRP GVA L AG+D P L+H+DPSG YVQ+ AKAIG S A+ L++A Y K MTL++AM L +L+ V+ S +VE+ V
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVVLAVEKRITSPLMEPTTIEKIVEIDKHIGCAVSGLMADSRTMVDRARVEAQNHWFTYDEKMSVESVAQAVSNLAIQF-----------GDSDDDGNAMSRPFGVAILFAGIDEKGPQLFHMDPSGTYVQYDAKAIGSGSEGAQQSLQEA--YNKSMTLKSAMKAALTILKQVMEEKLSSTNVEVAAV 220
BLAST of mRNA_H-paniculata_contig20899.5440.1 vs. uniprot
Match: UPI0006B071AC (proteasome subunit alpha type-5-like n=2 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B071AC) HSP 1 Score: 169 bits (428), Expect = 1.640e-46 Identity = 96/223 (43.05%), Postives = 134/223 (60.09%), Query Frame = 1
Query: 16 RCRQVEYAVQAAEKGGLTIGVQTEEGLVLAAQGRRRSSLLKRESVSKIANIDTCISCAMSGLLPDGRFLVDFARSWVQEHRFEFDEAPSVEVVSSQLSKLCLKFNGYDKDGKNGGGREEDDGLAMSRPMGVAFLLAGLDRGKPVLYHLDPSGAYVQWRAKAIGEKSAAAEAKLEDAGPYEK-MTLRTAMSTVLRVLEGVLGNDFSVESVEMVCVDASCGPNKG 681
R QVEYA++A + G IG+QT EG++LA + R S+L++ ++ KI IDT I CA+SGL+ D R +VD AR Q H F ++E VE V+ +S L ++F G +DDG+AMSRP GVA L AG+D P LYH+DPSG YVQ+ AKAIG S A+ L++ Y K MTL A T L++L+ V+ + ++E+ V P+KG
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVMLAVEKRVTSTLMESTTIEKIVEIDTHIGCAVSGLMADSRTMVDKARVEAQNHWFLYNEKMQVESVAQAVSNLAIRF-----------GDSDDDGIAMSRPFGVAILFAGIDERGPQLYHMDPSGTYVQYDAKAIGSGSEGAQQALQE--EYHKSMTLEEASKTALKILKQVMEEKLNSTNIEVAAVT----PDKG 225
BLAST of mRNA_H-paniculata_contig20899.5440.1 vs. uniprot
Match: X8JTI9_9AGAM (Proteasome subunit alpha type n=5 Tax=Ceratobasidiaceae TaxID=5250 RepID=X8JTI9_9AGAM) HSP 1 Score: 167 bits (422), Expect = 1.500e-45 Identity = 94/218 (43.12%), Postives = 133/218 (61.01%), Query Frame = 1
Query: 16 RCRQVEYAVQAAEKGGLTIGVQTEEGLVLAAQGRRRSSLLKRESVSKIANIDTCISCAMSGLLPDGRFLVDFARSWVQEHRFEFDEAPSVEVVSSQLSKLCLKFNGYDKDGKNGGGREEDDGLAMSRPMGVAFLLAGLDRGKPVLYHLDPSGAYVQWRAKAIGEKSAAAEAKLEDAGPYEKMTLRTAMSTVLRVLEGVLGNDFSVESVEMVCVDASCG 669
R QVEYA++A + G T+G++T EG+VL + R +SSLL+ S+ KI IDT + CAMSGL D R ++D AR Q HRF +DEA VE V+ + L L+F G + +D + MSRP GVA L+AG+D P LYH DPSG +V++ AKAIG S AA+A+L+D +++MTL A S L++L+ V+ +V++ V G
Sbjct: 20 RLFQVEYAIEAIKLGSTTVGIKTPEGVVLGVEKRVQSSLLESSSIEKIMEIDTHLGCAMSGLTADARTMIDHARLTAQNHRFTYDEAIKVESVTQAVCDLALRF---------GESMDNEDAM-MSRPFGVALLIAGIDELGPQLYHTDPSGTFVRYEAKAIGSGSEAAQAELQDKY-HKQMTLLEARSLTLKILKQVMEEKLDHHNVQLAQVTLEKG 226
BLAST of mRNA_H-paniculata_contig20899.5440.1 vs. uniprot
Match: A0A7J7JUL7_BUGNE (Proteasome subunit alpha type n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7JUL7_BUGNE) HSP 1 Score: 166 bits (419), Expect = 3.490e-45 Identity = 96/232 (41.38%), Postives = 138/232 (59.48%), Query Frame = 1
Query: 16 RCRQVEYAVQAAEKGGLTIGVQTEEGLVLAAQGRRRSSLLKRESVSKIANIDTCISCAMSGLLPDGRFLVDFARSWVQEHRFEFDEAPSVEVVSSQLSKLCLKFNGYDKDGKNGGGREEDDGLAMSRPMGVAFLLAGLDRGKPVLYHLDPSGAYVQWRAKAIGEKSAAAEAKLEDAGPYEKMTLRTAMSTVLRVLEGVLGNDFSVESVEMVCVDASCG---PNKGQTESALE 702
R QVEYA++A + G IG+QT EG+VLA + R S L++ +S+ KI +D+ + CAMSGL+ D R L+D AR Q H F +DE SVE V+ +S L L F D D + G AMSRP GVA L AG+D P L+HLDPSG ++++ AKAIG S A+ L+D ++ M L TA+ V+++L+ V+ + ++VE+ V + G NK Q E ++
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGLQTSEGVVLAVEKRVTSPLIEADSIEKIFEVDSHLGCAMSGLIADSRTLIDRARVEAQNHWFTYDEKMSVESVTQSVSNLALAFG--DDDAEPG---------AMSRPFGVALLFAGIDENGPQLFHLDPSGTFIRYDAKAIGSASEGAQQSLQDVF-HKSMNLETAIKEVMKILKQVMEEKLTSKNVELAIVTKADGFQRYNKQQLEDLVK 239
BLAST of mRNA_H-paniculata_contig20899.5440.1 vs. uniprot
Match: A0A0D2U7G7_CAPO3 (Proteasome subunit alpha type n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2U7G7_CAPO3) HSP 1 Score: 164 bits (416), Expect = 1.020e-44 Identity = 98/231 (42.42%), Postives = 131/231 (56.71%), Query Frame = 1
Query: 16 RCRQVEYAVQAAEKGGLTIGVQTEEGLVLAAQGRRRSSLLKRESVSKIANIDTCISCAMSGLLPDGRFLVDFARSWVQEHRFEFDEAPSVEVVSSQLSKLCLKFNGYDKDGKNGGGREEDDGLAMSRPMGVAFLLAGLDRGKPVLYHLDPSGAYVQWRAKAIGEKSAAAEAKLEDAGPYEKMTLRTAMSTVLRVLEGVLGNDFSVESVEMVCVDASCGP---NKGQTESAL 699
R QVEYA++A + G IG+QT EG+VLA + R S LL S+ KI +D I CAMSGL D R ++DF R Q H F ++E+ VE V+ L L L+F G D+D +DD MSRP GVA L+AG+D P L+H DPSG + Q+ AKAIG S A+ L+DA + ++LR A L L+ V+ + +VE+ CV A G NK Q E +
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTTEGVVLAVEKRITSPLLVPTSIEKIVEVDRHIGCAMSGLTADARTMIDFGRLEAQNHWFTYNESIKVESVTQALCDLALRF-GEDQD--------DDDESTMSRPFGVALLIAGVDENGPQLFHTDPSGTFTQFDAKAIGSGSEGAQTALQDAY-HATLSLREAAILALSTLKQVMEEKLTATNVELACVTAERGYHVYNKAQLEELI 240
BLAST of mRNA_H-paniculata_contig20899.5440.1 vs. uniprot
Match: A0A1Q3E886_LENED (Proteasome subunit alpha type n=4 Tax=Omphalotaceae TaxID=72117 RepID=A0A1Q3E886_LENED) HSP 1 Score: 165 bits (417), Expect = 1.320e-44 Identity = 92/218 (42.20%), Postives = 129/218 (59.17%), Query Frame = 1
Query: 16 RCRQVEYAVQAAEKGGLTIGVQTEEGLVLAAQGRRRSSLLKRESVSKIANIDTCISCAMSGLLPDGRFLVDFARSWVQEHRFEFDEAPSVEVVSSQLSKLCLKFNGYDKDGKNGGGREEDDGLAMSRPMGVAFLLAGLDRGKPVLYHLDPSGAYVQWRAKAIGEKSAAAEAKLEDAGPYEKMTLRTAMSTVLRVLEGVLGNDFSVESVEMVCVDASCG 669
R QVEYA++A + G T+GV+T+EG+VL + R +S L++ S+ KI ID + CAMSGL D R ++D AR Q H F +DE VE V+ + L L+F G D+ MSRP GVA L+AG+D P LYH DPSG +V+++AKAIG S AA+A+L+D + KMTLR A LR+L+ V+ +V++ V + G
Sbjct: 20 RLFQVEYAIEAIKLGSTTVGVRTDEGVVLGVEKRVQSPLIESSSIEKIMEIDAHLGCAMSGLTADARTMIDHARVTAQNHSFTYDEKIKVESVTQAVCDLALRF----------GESVHDEDAMMSRPFGVALLIAGIDELGPQLYHTDPSGTFVRYQAKAIGSGSEAAQAELQDKW-HSKMTLREAQLLTLRILKQVMEEKLDRHNVQLAQVTKANG 226
BLAST of mRNA_H-paniculata_contig20899.5440.1 vs. uniprot
Match: UPI001B88D703 (proteasome subunit alpha type-5 n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88D703) HSP 1 Score: 164 bits (415), Expect = 1.350e-44 Identity = 90/213 (42.25%), Postives = 129/213 (60.56%), Query Frame = 1
Query: 16 RCRQVEYAVQAAEKGGLTIGVQTEEGLVLAAQGRRRSSLLKRESVSKIANIDTCISCAMSGLLPDGRFLVDFARSWVQEHRFEFDEAPSVEVVSSQLSKLCLKFNGYDKDGKNGGGREEDDGLAMSRPMGVAFLLAGLDRGKPVLYHLDPSGAYVQWRAKAIGEKSAAAEAKLEDAGPYEKMTLRTAMSTVLRVLEGVLGNDFSVESVEMVCV 654
R QVEYA++A + G IG+QT EG+VLA + R S+L++ S+ KI +D+ I CAMSGL+ D R L+D AR+ Q H F ++E S+E V+ +S L L F G ++ D AMSRP GVA L AG+D P L+H+DPSG ++Q+ AKAIG S A+ L++ ++ MTL+ A + L +L+ V+ S +VEM V
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVVLAVEKRVTSTLIEPSSIEKIMEVDSHIGCAMSGLIADSRTLIDRARTEAQNHWFTYNEKMSIESVAQAVSNLALAF-----------GDDDADPAAMSRPFGVALLFAGIDSKGPQLFHMDPSGTFIQYDAKAIGSGSEGAQHSLQEVY-HKSMTLKAACKSALTILKQVMEEKLSSTNVEMATV 220
BLAST of mRNA_H-paniculata_contig20899.5440.1 vs. uniprot
Match: A0A164U9T5_9AGAM (Proteasome subunit alpha type n=2 Tax=Sistotremastrum TaxID=139133 RepID=A0A164U9T5_9AGAM) HSP 1 Score: 164 bits (414), Expect = 2.070e-44 Identity = 92/218 (42.20%), Postives = 128/218 (58.72%), Query Frame = 1
Query: 16 RCRQVEYAVQAAEKGGLTIGVQTEEGLVLAAQGRRRSSLLKRESVSKIANIDTCISCAMSGLLPDGRFLVDFARSWVQEHRFEFDEAPSVEVVSSQLSKLCLKFNGYDKDGKNGGGREEDDGLAMSRPMGVAFLLAGLDRGKPVLYHLDPSGAYVQWRAKAIGEKSAAAEAKLEDAGPYEKMTLRTAMSTVLRVLEGVLGNDFSVESVEMVCVDASCG 669
R QVEYA++A + G T+GV+T +G+VL + R +S LL+ SV KI ID + CAMSGL D R ++D AR Q H F +DE VE V+ + L L+F G ED+G MSRP GVA L+AG+D P L+H DPSG ++++ AKAIG S AA+++L+D + +MTL A + LRVL+ V+ +VE+ V G
Sbjct: 20 RLFQVEYAIEAIKLGSTTVGVRTRDGVVLGVEKRTQSPLLESSSVEKIMEIDRHLGCAMSGLTADARTMIDHARVTSQNHAFTYDEKIKVESVTQSVCDLALRF----------GESVEDEGAMMSRPFGVALLIAGIDELGPQLFHTDPSGTFMRYEAKAIGSGSEAAQSELQDKY-HSQMTLEEAQNLTLRVLKQVMEEKLDQHNVELAQVTVDKG 226
BLAST of mRNA_H-paniculata_contig20899.5440.1 vs. uniprot
Match: UPI0002658A20 (proteasome subunit alpha type-5 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0002658A20) HSP 1 Score: 163 bits (413), Expect = 2.740e-44 Identity = 92/220 (41.82%), Postives = 129/220 (58.64%), Query Frame = 1
Query: 16 RCRQVEYAVQAAEKGGLTIGVQTEEGLVLAAQGRRRSSLLKRESVSKIANIDTCISCAMSGLLPDGRFLVDFARSWVQEHRFEFDEAPSVEVVSSQLSKLCLKFNGYDKDGKNGGGREEDDGLAMSRPMGVAFLLAGLDRGK-PVLYHLDPSGAYVQWRAKAIGEKSAAAEAKLEDAGPYEK-MTLRTAMSTVLRVLEGVLGNDFSVESVEMVCVDASCG 669
R QVEYA++A + G IG+QT EG VLA + R S L++ ++ KI ID I CA+SGL+ D R ++D AR Q H F +DE+ VE + +S L +KF G +DDG AMSRP GVA L AG+D K P L+H+DPSG YV++ AKAIG A+ L++ Y K MTL+ A+ +L +L+ V+ V++VE+ + G
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGCVLAVEKRVTSPLMESTTIEKIVEIDKFIGCAVSGLMADSRTMIDKARVEAQNHWFNYDESMRVESCAQAVSNLAIKF-----------GDNDDDGTAMSRPFGVAILFAGIDEKKGPQLFHMDPSGTYVEFLAKAIGSGCEGAQQALQE--KYHKSMTLKEALKEILVILKQVMEEKLGVDNVEVATITKEAG 226 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20899.5440.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig20899.5440.1 >prot_H-paniculata_contig20899.5440.1 ID=prot_H-paniculata_contig20899.5440.1|Name=mRNA_H-paniculata_contig20899.5440.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=256bp MSGLLPDGRFLVDFARSWVQEHRFEFDEAPSVEVVSSQLSKLCLKFNGYDback to top mRNA from alignment at H-paniculata_contig20899:804..2883- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig20899.5440.1 ID=mRNA_H-paniculata_contig20899.5440.1|Name=mRNA_H-paniculata_contig20899.5440.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2080bp|location=Sequence derived from alignment at H-paniculata_contig20899:804..2883- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig20899:804..2883- >mRNA_H-paniculata_contig20899.5440.1 ID=mRNA_H-paniculata_contig20899.5440.1|Name=mRNA_H-paniculata_contig20899.5440.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1536bp|location=Sequence derived from alignment at H-paniculata_contig20899:804..2883- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |