mRNA_H-paniculata_contig20892.5439.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig20892.5439.1 vs. uniprot
Match: A0A6H5L4D5_9PHAE (PFU domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4D5_9PHAE) HSP 1 Score: 193 bits (491), Expect = 3.170e-54 Identity = 144/363 (39.67%), Postives = 164/363 (45.18%), Query Frame = 1
Query: 1 QNNVCVLGLSDVSVATGSTGLEVAGQLMGQQIRLWEGSPLKEVRSLTQHKSGIRDLCQTSPRKITRNGDKQNDGSGEVGAAFCSASNDGTVRTWNAGGDCLGVFVIPG---VYT----GQSTLANVTDA----------------------------------------------------------------------------------------------VVADVATGSADNMIRVFTADATRALQGDELIQVQEA----SLLLAERGDGCAVPPPSFLSGEGGAAAGGLPSVSDMGNMVGEMDGHLSAFG-DENGGAKVFRWKEALNQAGGSPGWEAVGTLRPPVRKVPFEGGLYDQVI 771
+NNVCVLGL S+ATGSTGL V G L+GQQIR+WEGSP KE RSLT H SGIRDLC + S G FCSASND TVR W+ GDC V IP V++ G +A+ DA VADVATGSAD+ +RVFT D+ R L+GD L + EA S A GD AVP L G LPS S+M MVG DG LSAF E G AKVFRW EA+ + G WE +GTLRPPVRKV FEGGLYD+VI
Sbjct: 197 ENNVCVLGLGPGSIATGSTGLSVEGHLVGQQIRMWEGSPPKECRSLTDHTSGIRDLCLVDAPASSL--------SSSPGQCFCSASNDATVRVWSEEGDCRVVVTIPDESFVFSVSDLGAGLVASADDAGNLCAARVPXXXXXXXXXXXXXXXXXXTATVLFKHPKTVWSVAALRTPNGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGDGGGISDEGSVADVATGSADHAVRVFTPDSERFLRGDRLKEALEAVGGGSSSDACGGDAAAVPGSGALFGGRSGGGENLPSTSEMSVMVGAEDGQLSAFACHETGLAKVFRWTEAVGERGAK--WEQLGTLRPPVRKVAFEGGLYDKVI 549
BLAST of mRNA_H-paniculata_contig20892.5439.1 vs. uniprot
Match: A0A7S3XRF4_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRF4_HETAK) HSP 1 Score: 86.7 bits (213), Expect = 4.510e-16 Identity = 82/294 (27.89%), Postives = 120/294 (40.82%), Query Frame = 1
Query: 1 QNNVCVLGLSDVSVATGSTGLEVAGQLMGQQIRLWEGSPLKEVRSLTQHKSGIRDLCQTSPRKITRNGDKQNDGSGEVGAAFCSASNDGTVRTWNAGGDCLGVFVIPG-------VYTGQSTLA---------------------NVTDAVVA-------DVATGSADNMIRVFTADATRALQGDELIQVQEASLLLAERGDGCAVPPPSFLSGEGGAAAGGLPSVSDMGNMVGEMDGHLSAFGD-ENGGAKVFRWKEALNQAGGSPGWEAVGTLRP-PVRKVPFEGGLYDQVI 771
+NN+CVLGLS+ V TGSTG +V + G QIRLW+ +++ H +GIRDLC GE G SASNDGTVR C VFV P + G A N T + A D DN+I +FT ++L + L Q+ ++ + G + +G ++ LPS D+ G +G +S F + G+ +RW+ GG+ W A+G + PV + G +D V+
Sbjct: 26 ENNICVLGLSNGDVVTGSTGFQVEHAIQGHQIRLWKNGKVEKTNQ--DHSAGIRDLCAVV---------------GEEGLMCASASNDGTVRLLGPDLACAEVFVCPDGSFAFSVAHLGAGRFAAAQESGTLVLFQRGVGVLRTINFTKGLWAVRRLPSDDFMVAGEDNIIIIFTDKEDKSLSQETLDQILGQNIKEQQERRGHQEQGSASSQXQGSSSP--LPSEQDLDKYRGAKEGDISLFQSLTSNGSTAYRWE------GGA--WRALGPVAAAPVPRAELGGAYFDVVV 292
BLAST of mRNA_H-paniculata_contig20892.5439.1 vs. uniprot
Match: A0A024UF35_9STRA (PFU domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UF35_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 8.510e-10 Identity = 83/295 (28.14%), Postives = 115/295 (38.98%), Query Frame = 1
Query: 1 QNNVCVLGLSDVSVATGSTGLEVAGQLMGQQIRLWEG-SPLKEV--RSLTQHKSGIRDLCQTSPRKITRNGDKQNDGSGEVGAA---------------------------------FCSASNDGTVRTWNAGGDCLGVFVIPGVYTGQSTLANVTDAVVADVATGSADNMIRVFTADATR--ALQGDELIQVQEASLLLAERGDGCAVPPPSFLSGEGGAAAGGLPSVSDMGNMVGEMDGHLSAFGDENGGAKVFRWKEALNQAGGSPGWEAVGTLRPPVRKVPFEGGLYDQVI 771
+N VCVLGL + +ATGSTG + Q++ +IR+W SP + R+L+ H+ +R L Q NDGS ++ AA SAS D T R W+ G C+ P S LAN D ATG+ D +RVF+ R AL+ QV EA + A RG PS + E LP + VG+ DG + F +N W + G+ W +G + +G YD VI
Sbjct: 156 ENGVCVLGLPNGVIATGSTGKQQGNQVVDARIRMWHAVSPTEYALTRTLSDHQGPVRQLVQVDAIGFAS---CSNDGSIKLRAADDGAVLVTCQHPLNHEGKPGFVLGLAYLPQSQHLVSASEDSTARVWSLDGTCVQTIDHPSGLWCVSALAN------GDFATGAEDKSVRVFSYRTPRNDALETALATQVAEAHVQAA-RG-------PSAVEVES------LPPYDMRASQVGKSDGMVQMFRRDN-----VAWACQWSAVSGT--WLDIGQVTGTGSGGVVDGEAYDMVI 420
BLAST of mRNA_H-paniculata_contig20892.5439.1 vs. uniprot
Match: A0A024UDK3_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UDK3_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 9.430e-10 Identity = 83/295 (28.14%), Postives = 115/295 (38.98%), Query Frame = 1
Query: 1 QNNVCVLGLSDVSVATGSTGLEVAGQLMGQQIRLWEG-SPLKEV--RSLTQHKSGIRDLCQTSPRKITRNGDKQNDGSGEVGAA---------------------------------FCSASNDGTVRTWNAGGDCLGVFVIPGVYTGQSTLANVTDAVVADVATGSADNMIRVFTADATR--ALQGDELIQVQEASLLLAERGDGCAVPPPSFLSGEGGAAAGGLPSVSDMGNMVGEMDGHLSAFGDENGGAKVFRWKEALNQAGGSPGWEAVGTLRPPVRKVPFEGGLYDQVI 771
+N VCVLGL + +ATGSTG + Q++ +IR+W SP + R+L+ H+ +R L Q NDGS ++ AA SAS D T R W+ G C+ P S LAN D ATG+ D +RVF+ R AL+ QV EA + A RG PS + E LP + VG+ DG + F +N W + G+ W +G + +G YD VI
Sbjct: 156 ENGVCVLGLPNGVIATGSTGKQQGNQVVDARIRMWHAVSPTEYALTRTLSDHQGPVRQLVQVDAIGFAS---CSNDGSIKLRAADDGAVLVTCQHPLNHEGKPGFVLGLAYLPQSQHLVSASEDSTARVWSLDGTCVQTIDHPSGLWCVSALAN------GDFATGAEDKSVRVFSYRTPRNDALETALATQVAEAHVQAA-RG-------PSAVEVES------LPPYDMRASQVGKSDGMVQMFRRDN-----VAWACQWSAVSGT--WLDIGQVTGTGSGGVVDGEAYDMVI 420
BLAST of mRNA_H-paniculata_contig20892.5439.1 vs. uniprot
Match: A0A1V9ZZ88_9STRA (Phospholipase A-2-activating protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZ88_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 4.050e-9 Identity = 85/304 (27.96%), Postives = 116/304 (38.16%), Query Frame = 1
Query: 1 QNNVCVLGLSDVSVATGSTGLEVAGQLMGQQIRLWEGSP-LKEVRS-LTQHKSGIRDLCQTSPRKITRNGDKQNDGSGEVGAAFCSASNDGTVRTWNAGGD----CLGVFVI---PGVYTGQSTLANVTDAVVA-----------------------------------DVATGSADNMIRVFTADATRALQGDELIQVQE---ASLLLAERGDGCAVPPPSFLSGEGGAAAGGLPSVSDMGNMVGEMDGHLSAFGDENGGAKVFRWKEALNQAGGSPGWEAVGTLRPPVRKVPFEGGLYDQVI 771
+N VCVLGLS+ +V TGSTG + Q++ IR+W+ S + V+S L +H+ IR L Q E+G F S SNDG+++ W GD C F PG G + L N V A D ATG D + RVF+ AT E+I QE A+ +RG PS + LP + G VG DG + F N A +W +G S W +G + +G +D VI
Sbjct: 146 ENGVCVLGLSNDTVITGSTGRQEGNQVVDAVIRVWQPSNGVYAVKSTLNEHQGPIRQLVQVP----------------EIG--FASCSNDGSIKLWTTHGDVVMSCSHPFNHEGKPGFVLGLTYLPNTQQLVSAXXXXXXXXXXXXXXXXXXXXXXQGLWCAAALGNGVDFATGGDDKVARVFSTQATMETSAAEIISFQEEVAAAATARQRG-------PSSVD------IAKLPDYNHRGAKVGPSDGFIQMFRKGNS-AWACQW------SGPSQTWLDIGEVTGTGSGGIVDGKSFDIVI 411
BLAST of mRNA_H-paniculata_contig20892.5439.1 vs. uniprot
Match: A0A836CND0_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CND0_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 4.110e-9 Identity = 73/295 (24.75%), Postives = 107/295 (36.27%), Query Frame = 1
Query: 1 QNNVCVLGLSDVSVATGSTGLEVAGQLMGQQIRLWEGSPLKEVRSLTQHKSGIRDLCQTSPRKITRNGDKQNDGSGEVGAAFCSASNDGTVRTWNAGGDCLGV------------FVIPGVYTGQSTLANVTDAVVA---------------------------DVATGSADNMIRVFTADATRALQGDELIQVQEASLLLAERGDGCAVPPPSFLSGEGGAAAGGLPSVSDMGNMVGEMDGHLSAFGDENGGAKVFRWKEALNQAGGSPGWEAVGTLRPPVRKVPFEGGLYDQV 768
+N VCVLGLS+ ++ATGSTG + AG+++ QIRLW K++ +L H+ +R L + N F S SNDGTVR W+ G L FV+ G V +A V D TG D+ R+FT RA D +++ EA++ + + G LP + G + + F +G A +W A S W +G + +G YD V
Sbjct: 155 ENGVCVLGLSNGTIATGSTGKQGAGRVVDAQIRLWSPEG-KQIAALKDHEGPVRSL------DVVPN------------LGFMSTSNDGTVRVWSTDGSALATMHHPPGREGQPAFVLSGCCLESGEYVTVDEAGVCIVWRDCQAVQTIQHPSSLWCVAPLSGGDFVTGCQDHHARIFTRAPERAAAAD-VVKAFEATVKETQE---------ATAKGPSDMEISKLPHWEQRHALPGRAEQQVQVF-QRDGKAIAAQWSAA------SSAWVEIGEVTGSTNSGTLDGVQYDHV 413
BLAST of mRNA_H-paniculata_contig20892.5439.1 vs. uniprot
Match: A0A6G0X6M7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X6M7_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 7.330e-9 Identity = 84/294 (28.57%), Postives = 116/294 (39.46%), Query Frame = 1
Query: 1 QNNVCVLGLSDVSVATGSTGLEVAGQLMGQQIRLWEG-SPLKE--VRSLTQHKSGIRDLCQTSPRKITRNGDKQNDGS--------GEV------------------GAAFC-------SASNDGTVRTWNAGGDCLGVFVIPGVYTGQSTLANVTDAVVADVATGSADNMIRVF-TADATRALQGDELIQVQEASLLLAERGDGCAVPPPSFLSGEGGAAAGGLPSVSDMGNMVGEMDGHLSAFGDENGGAKVFRWKEALNQAGGSPGWEAVGTLRPPVRKVPFEGGLYDQVI 771
+N VCVLGLS+ +ATGSTG + Q++ IR+W+ SP +++LT H+ +R L NDG+ GEV G A+ S S D T R W G CL P + L+N D ATG+ D +RVF T+ AL QV EA + + RG PS + E LP+ G+ VG+ DG + F +N W N G+ W +G + +G YD VI
Sbjct: 149 ENGVCVLGLSNGRIATGSTGRQQGNQVVDACIRMWDAVSPFNYTLMKTLTDHQGPVRQLVSVDEIGFAS---CSNDGTIKLRAAEDGEVLMTCSHPLNHEGKPAFVLGLAYLPKTQHLVSVSEDCTARVWTLDGSCLQTIEHPSGLWCVAPLSN------GDFATGAEDKTVRVFSTSGNDPALAAVLTAQVAEAHVQKS-RG-------PSAVEIEK------LPAYEARGSHVGKSDGMIQMFRRDN-----VAWACQWNAISGT--WLDIGQVTGTGSGGVIDGEAYDMVI 412
BLAST of mRNA_H-paniculata_contig20892.5439.1 vs. uniprot
Match: H3GC46_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GC46_PHYRM) HSP 1 Score: 65.9 bits (159), Expect = 1.330e-8 Identity = 76/288 (26.39%), Postives = 111/288 (38.54%), Query Frame = 1
Query: 1 QNNVCVLGLSDVSVATGSTGLEVAGQLMGQQIRLWEGSPLKEVRSLTQHKSGIRDLC------------------QTSPRKITRNGDKQNDGSGEVGAAF----------CSASNDGTVRTWNAGGDCLGVFVIPGVYTGQSTLANVTDAVVADVATGSADNMIRVFTADATRALQGDELIQVQ---EASLLLAERGDGCAVPPPSFLSGEGGAAAGGLPSVSDMGNMVGEMDGHLSAFGDENGGAKVFRWKEALNQAGGSPGWEAVGTLRPPVRKVPFEGGLYDQVI 771
+N VCVLGL D S+ TGSTG +V + ++R W + L ++L H+ IR L +T + + + + G+ G SAS D T R W+ G + PG + L N D ATG D ++RVFT DA R + D + Q E + + +RG PS + E LP ++ G DG + F G K + A +G S W +G + +G YD VI
Sbjct: 113 ENGVCVLGLPDGSLVTGSTGQQVGNSVADFKLRFWAKNTLALTKTLADHQGPIRQLALMPDIGFVSCSNDGSIKLRTLDGTVVASMEHPLNAEGKPGFVLGVCVLGNGFVVSASEDCTARVWSPEGVLIQTVEHPGGLWCVAALPN------GDFATGCDDKVMRVFTHDAAR-VDPDAVASFQAAVEEARIAKQRG-------PSGVEIES------LPDYDQRASVNGNSDGQIQMF---RRGTKAW----ACQWSGPSRTWIDIGEVTGTGGGGVIDGEAYDMVI 373
BLAST of mRNA_H-paniculata_contig20892.5439.1 vs. uniprot
Match: A0A3F2RGZ7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RGZ7_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.340e-8 Identity = 77/288 (26.74%), Postives = 109/288 (37.85%), Query Frame = 1
Query: 1 QNNVCVLGLSDVSVATGSTGLEVAGQLMGQQIRLWEGSPLKEVRSLTQHKSGIRDLC------------------QTSPRKITRNGDKQNDGSGEVGAAF----------CSASNDGTVRTWNAGGDCLGVFVIPGVYTGQSTLANVTDAVVADVATGSADNMIRVFTADATRALQGDELIQVQ---EASLLLAERGDGCAVPPPSFLSGEGGAAAGGLPSVSDMGNMVGEMDGHLSAFGDENGGAKVFRWKEALNQAGGSPGWEAVGTLRPPVRKVPFEGGLYDQVI 771
+N VCVLGL D SV TGSTG +V + ++R W L +++T H+ IR L +T + + + + G+ G SAS D T R W+ G + PG + L N D ATG D +RVFT DA R + D + Q E + + RG PS + E LP ++ G DG + F G K + A +G S W +G + +G YD VI
Sbjct: 146 ENGVCVLGLPDGSVVTGSTGQQVGNSVADFKLRFWSNESLTLTKTMTDHQGPIRQLALVPNIGFVSCSNDGSIKLRTLDGAVLASMEHPLNTEGKPGFVLGVCVLSSGFLVSASEDCTARVWSPEGALVQTVEHPGGLWCVTGLPN------GDFATGCDDKTVRVFTHDAAR-VDPDAVASFQAALEEARIAKTRG-------PSGVEIES------LPDYDQRASVQGSSDGQIQMF---RRGTKAW----ACQWSGPSRTWIDIGEVTGTGGGGVVDGEAYDMVI 406
BLAST of mRNA_H-paniculata_contig20892.5439.1 vs. uniprot
Match: A0A421GAV3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GAV3_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.510e-8 Identity = 77/288 (26.74%), Postives = 109/288 (37.85%), Query Frame = 1
Query: 1 QNNVCVLGLSDVSVATGSTGLEVAGQLMGQQIRLWEGSPLKEVRSLTQHKSGIRDLC------------------QTSPRKITRNGDKQNDGSGEVGAAF----------CSASNDGTVRTWNAGGDCLGVFVIPGVYTGQSTLANVTDAVVADVATGSADNMIRVFTADATRALQGDELIQVQ---EASLLLAERGDGCAVPPPSFLSGEGGAAAGGLPSVSDMGNMVGEMDGHLSAFGDENGGAKVFRWKEALNQAGGSPGWEAVGTLRPPVRKVPFEGGLYDQVI 771
+N VCVLGL D SV TGSTG +V + ++R W L +++T H+ IR L +T + + + + G+ G SAS D T R W+ G + PG + L N D ATG D +RVFT DA R + D + Q E + + RG PS + E LP ++ G DG + F G K + A +G S W +G + +G YD VI
Sbjct: 809 ENGVCVLGLPDGSVVTGSTGQQVGNSVADFKLRFWSNESLTLTKTMTDHQGPIRQLALVPNIGFVSCSNDGSIKLRTLDGAVLASMEHPLNTEGKPGFVLGVCVLSSGFLVSASEDCTARVWSPEGALVQTVEHPGGLWCVTGLPN------GDFATGCDDKTVRVFTHDAAR-VDPDAVASFQAALEEARIAKTRG-------PSGVEIES------LPDYDQRASVQGSSDGQIQMF---RRGTKAW----ACQWSGPSRTWIDIGEVTGTGGGGVVDGEAYDMVI 1069 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20892.5439.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig20892.5439.1 >prot_H-paniculata_contig20892.5439.1 ID=prot_H-paniculata_contig20892.5439.1|Name=mRNA_H-paniculata_contig20892.5439.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=257bp QNNVCVLGLSDVSVATGSTGLEVAGQLMGQQIRLWEGSPLKEVRSLTQHKback to top mRNA from alignment at H-paniculata_contig20892:395..4235- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig20892.5439.1 ID=mRNA_H-paniculata_contig20892.5439.1|Name=mRNA_H-paniculata_contig20892.5439.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3841bp|location=Sequence derived from alignment at H-paniculata_contig20892:395..4235- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig20892:395..4235- >mRNA_H-paniculata_contig20892.5439.1 ID=mRNA_H-paniculata_contig20892.5439.1|Name=mRNA_H-paniculata_contig20892.5439.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1542bp|location=Sequence derived from alignment at H-paniculata_contig20892:395..4235- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |