mRNA_H-paniculata_contig2082.5414.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2082.5414.1 vs. uniprot
Match: A0A6H5L6K6_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6K6_9PHAE) HSP 1 Score: 268 bits (684), Expect = 1.920e-78 Identity = 170/349 (48.71%), Postives = 192/349 (55.01%), Query Frame = 1
Query: 1 CVSVARDAKTVAWAGE--NGSTVRRFTFDYAAAEEVRQEELFERIGRPVTNACLDGFNGTIFCYGQTGSGKTYTTFGPPP----------------------------------------EGQDSLAEARHDRGPSTSIRSP-------------------------------------------RDAASGRERGLVPRVLEYLFERFALQ--ARAAKEQEGGA-------VEIYACRCSFYEIYNEQVFDLAVVGADKVPLNVREGADKGIFLEGLSEEEVENAEEACEVLRRGYASRHIASTAMNSTSSRSHAVFTMVIDTAVQFLPEQQDDAAQVAGEGKTAGPSG 765
C SV D +TVAWAGE +G + FTFDYAA E V QEELFE+IGRPVTNACL+GFNGTIFCYGQTGSGKT+TTFGPP EG D +R G + SP R A+G RGLVPRVLEYLF+RF+ + +Q GG EI+ CRCSFYEIYNEQV+DL V D+VPLNVRE ADKGIFLEGLSE EV +AE+AC+VL RGYASRH ASTAMNS SSRSHAVFT+VIDTAVQ + VA EG +AG G
Sbjct: 593 CASVGPDERTVAWAGERADGVGAKHFTFDYAAGEGVGQEELFEKIGRPVTNACLEGFNGTIFCYGQTGSGKTFTTFGPPDDVVNGISGGGDXXXXXXXSRSGSPGERGLRESFESHSPGGEGVDRSGSSRTSPGGDKNGASPXXXXXXXGGDXXXXXXEGKTTKRXXXXXXXXXXXXVVAEAEGARALATGENRGLVPRVLEYLFDRFSASDAGHPSSQQPGGEGSRPPAPSEIHVCRCSFYEIYNEQVYDLTVPDEDRVPLNVREAADKGIFLEGLSEAEVTSAEDACKVLMRGYASRHTASTAMNSASSRSHAVFTLVIDTAVQMV-------LPVAAEGGSAGSEG 934
BLAST of mRNA_H-paniculata_contig2082.5414.1 vs. uniprot
Match: A0A836CCN8_9STRA (Kinesin motor domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCN8_9STRA) HSP 1 Score: 223 bits (568), Expect = 6.930e-63 Identity = 126/239 (52.72%), Postives = 160/239 (66.95%), Query Frame = 1
Query: 1 CVSVARDAKTVAWAGENGSTVRRFTFDYAAAEEVRQEELFERIGRPVTNACLDGFNGTIFCYGQTGSGKTYTTFGPPPEGQDSLAEARHDRGPSTSIRSPRDAASGRERGLVPRVLEYLFERFALQARAAKEQEGGAVEIYACRCSFYEIYNEQVFDL---AVVGADKVPLNVREGADKGIFLEGLSEEEVENAEEACEVLRRGYASRHIASTAMNSTSSRSHAVFTMVIDTAVQFLPE 708
CV++A D KT+ A + T R FTFDYAA EE QEE+FE++G+P+T ACL+G+NGTIFCYGQTGSGKT+TTFGP +++L P+D S +RGLVPRVLE+LF+ A QA GG V YACRCSFYEI+NE+VFDL A + LNVRE KG+++EGL+EE+V A+ A +L RGY +RH+ TAMN SSRSHAVFT+VI+ + L E
Sbjct: 131 CVTIAEDGKTIVLASK--PTNRLFTFDYAAGEESTQEEVFEQVGKPITQACLEGYNGTIFCYGQTGSGKTFTTFGPSAAMENAL--------------DPQDPRSLSQRGLVPRVLEFLFDSIAAQAA------GGRVT-YACRCSFYEIFNERVFDLLDSASSSSGPNGLNVREDTRKGVYVEGLTEEQVTGADAAGSILFRGYRNRHVGETAMNRESSRSHAVFTLVIEAREEALEE 346
BLAST of mRNA_H-paniculata_contig2082.5414.1 vs. uniprot
Match: D7FU65_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU65_ECTSI) HSP 1 Score: 191 bits (484), Expect = 1.030e-51 Identity = 127/296 (42.91%), Postives = 146/296 (49.32%), Query Frame = 1
Query: 1 CVSVARDAKTVAWAGE--NGSTVRRFTFDYAAAEEVRQEELFERIGRPVTNACLDGFNGTIFCYGQTGSGKTYTTFGPPPE---------------------GQDSLAEARHDRGP-------STSIRSP---------------------------------------------------------------------RDAASGRERGLVPRVLEYLFERFALQARA--AKEQEGGA-------VEIYACRCSFYEIYNEQVFDLAVVGADKVPLNVREGADKGIFLEGLSEEEV 564
C SV D +TVAWAGE +G + FTFDYAA E V QEELFE+IGRPVTNACL+GFNGTIFCYGQTGSGKT+TTFGPP + G+ L E+ P S+S SP R A+G RGLVPRVLEYLF++F+ + +Q GG EI+ CRCSFYEIYNEQV+DL V D+VPLNVRE ADKGIFLEGLSE EV
Sbjct: 530 CASVGPDERTVAWAGERADGVGAKHFTFDYAAGEGVGQEELFEKIGRPVTNACLEGFNGTIFCYGQTGSGKTFTTFGPPDDVVNGVDGGGGDGSSRSRSGSPGERGLRESSESISPVGEEIDRSSSRTSPGGDRNGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKTAKRKXXXXXXXRVVAEAEGARALATGENRGLVPRVLEYLFDQFSASDAGPPSSQQPGGEGSSPPAPSEIHVCRCSFYEIYNEQVYDLTVPDEDRVPLNVREAADKGIFLEGLSEAEV 825
BLAST of mRNA_H-paniculata_contig2082.5414.1 vs. uniprot
Match: W7TV58_9STRA (Kinesin-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TV58_9STRA) HSP 1 Score: 186 bits (471), Expect = 2.190e-50 Identity = 108/231 (46.75%), Postives = 141/231 (61.04%), Query Frame = 1
Query: 1 CVSVARDAKTVAWAGENGSTVRRFTFDYAAAEEVRQEELFERIGRPVTNACLDGFNGTIFCYGQTGSGKTYTTFGPPPEGQDSLAEARHDRGPSTSIRSPRDAASGRERGLVPRVLEYLFERFALQARAAKEQEGGAVEIYACRCSFYEIYNEQVFDL--AVVGADKVPLNVREGADKGIFLEGLSEEEVENAEEACEVLRRGYASRHIASTAMNSTSSRSHAVFTMVIDT 687
CV+V KTV +G + FTFD+A ++ QE +F+ G+P T AC+ G+NGT+FCYGQTGSGKTYT FGP + S E RGLVPRVLEYLF A + R + GGA+ Y CRCSFYEI+NE+VFDL + G L RE KG+++EGL+EE V++ +A +VL RGY +RH+ TAMN SSRSHAVFT+V+++
Sbjct: 46 CVTVGETRKTVTLKQASGPKI--FTFDHAVGDDASQESVFQLAGKPATKACILGYNGTVFCYGQTGSGKTYTMFGPNVDACGSDDE---------------------HRGLVPRVLEYLFAHVAREER----RNGGAIT-YLCRCSFYEIFNERVFDLLDSDSGCSVGGLQTREDMKKGVYVEGLTEEAVDSPYQAHQVLTRGYRNRHVGETAMNRESSRSHAVFTVVLES 248
BLAST of mRNA_H-paniculata_contig2082.5414.1 vs. uniprot
Match: A0A4D9CPI7_9STRA (Kinesin motor domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CPI7_9STRA) HSP 1 Score: 186 bits (473), Expect = 3.550e-50 Identity = 109/231 (47.19%), Postives = 141/231 (61.04%), Query Frame = 1
Query: 1 CVSVARDAKTVAWAGENGSTVRRFTFDYAAAEEVRQEELFERIGRPVTNACLDGFNGTIFCYGQTGSGKTYTTFGPPPEGQDSLAEARHDRGPSTSIRSPRDAASGRERGLVPRVLEYLFERFALQARAAKEQEGGAVEIYACRCSFYEIYNEQVFDL--AVVGADKVPLNVREGADKGIFLEGLSEEEVENAEEACEVLRRGYASRHIASTAMNSTSSRSHAVFTMVIDT 687
CV+V KTV +G V FTFD+A ++ QE +F+ G+P T AC+ G+NGT+FCYGQTGSGKTYT FGP + S E RGLVPRVLEYLF A + R + GGA+ Y CRCSFYEI+NE+VFDL + G L RE KG+++EGL+EE V++ +A +VL RGY +RH+ TAMN SSRSHAVFT+V+++
Sbjct: 46 CVTVGETRKTVTLKQASGPKV--FTFDHAVGDDASQESVFQLAGKPATKACILGYNGTVFCYGQTGSGKTYTMFGPNVDACGSDDE---------------------HRGLVPRVLEYLFAHVAREER----RNGGAIT-YLCRCSFYEIFNERVFDLLDSDSGCSVGGLQTREDMKKGVYVEGLTEEAVDSPYQAYQVLTRGYRNRHVGETAMNRESSRSHAVFTVVLES 248
BLAST of mRNA_H-paniculata_contig2082.5414.1 vs. uniprot
Match: A0A6H5JA04_9PHAE (Kinesin motor domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JA04_9PHAE) HSP 1 Score: 180 bits (457), Expect = 5.100e-48 Identity = 120/301 (39.87%), Postives = 154/301 (51.16%), Query Frame = 1
Query: 1 CVSVARDAKTVAWAGENGSTVRRFTFDYAAAEEVRQEELFERIGRPVTNACLDGFNGTIFCYGQT-------------------------GSGKTYTTFGPPPEGQDSLAEARHDRGPSTSIRSPRDAASGRERGLVPRVLEYLFERFALQARAAKEQEGGAVEIYACRCSFYEIYNEQVFDLAVVGADKVPLN--VREGADKGIFLEGLSEEEV-----------------------------ENAEEACEVLRRGYASRHIASTAMNSTSSRSHAVFTMVIDTAVQFLPEQQDDAAQVA 735
CV+V D +TV + + FTFDYAA E+ QEELF +G+PVT ACL+G+NGTIFCYGQT GSGKT+TTFGP ++ L +P D S RGLVPRVLEYL+ A Q GG Y+C+CSF+EI+NE+VFDL PL VRE KG+++EGL EE+V + E ACEVL RG+ +RH+ TAMN SSRSHAVFT+VI A + + E+ +++A
Sbjct: 48 CVAVREDKRTVTL--NSKPQEKNFTFDYAAGEDSTQEELFSEVGKPVTEACLEGYNGTIFCYGQTLPAETELEPHDALLPSTVVFDGVQTGSGKTFTTFGPGAVMENHL--------------TPSDPKSYALRGLVPRVLEYLYANIARQV-----DNGGGKVSYSCKCSFFEIFNEKVFDLVDESNRDNPLGLTVREDTRKGVYVEGLMEEDVSWVTAVVAIMGVTITKKVAGNESVTESVVDGVESACEVLHRGFRNRHVGETAMNRESSRSHAVFTLVIQ-ATEVVEEEGLTRSRIA 326
BLAST of mRNA_H-paniculata_contig2082.5414.1 vs. uniprot
Match: L1JBR1_GUITC (Kinesin motor domain-containing protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JBR1_GUITC) HSP 1 Score: 161 bits (408), Expect = 1.210e-44 Identity = 88/206 (42.72%), Postives = 127/206 (61.65%), Query Frame = 1
Query: 70 FTFDYAAAEEVRQEELFERIGRPVTNACLDGFNGTIFCYGQTGSGKTYTTFGPPPEGQDSLAEARHDRGPSTSIRSPRDAASGRERGLVPRVLEYLFERFALQARAAKEQEGGAVEIYACRCSFYEIYNEQVFDLAVVGADKVPLNVREGADKGIFLEGLSEEEVENAEEACEVLRRGYASRHIASTAMNSTSSRSHAVFTMVIDT 687
FTFDYAA QEE+F IG+P T++CL G+NG IF YGQTGSGKT+T GP +G++ E RGL+PR +YLF++ A + AA G+++ + RCS+ EIYNE V DL + KV L VRE + +GI+++GL+ +EV +AE +L+RG +RH+ T+MN SSRSH++FT+ +++
Sbjct: 1 FTFDYAADPSTTQEEMFNMIGQPFTDSCLKGYNGCIFAYGQTGSGKTFTMQGPEFDGKEGTKE---------------------HRGLIPRTFDYLFDKIAHKENAANSSRPGSLQ-FVVRCSYLEIYNETVTDL--LDPSKVNLQVRENSKEGIYVDGLTWQEVRDAEACNALLQRGLRNRHVGETSMNKESSRSHSLFTLKVES 182
BLAST of mRNA_H-paniculata_contig2082.5414.1 vs. uniprot
Match: C3ZBN6_BRAFL (Kinesin-like protein (Fragment) n=3 Tax=Branchiostoma TaxID=7737 RepID=C3ZBN6_BRAFL) HSP 1 Score: 156 bits (395), Expect = 1.370e-42 Identity = 90/208 (43.27%), Postives = 125/208 (60.10%), Query Frame = 1
Query: 64 RRFTFDYAAAEEVRQEELFERIGRPVTNACLDGFNGTIFCYGQTGSGKTYTTFGPPPEGQDSLAEARHDRGPSTSIRSPRDAASGRERGLVPRVLEYLFERFALQARAAKEQEGGAVEIYACRCSFYEIYNEQVFDLAVVGADKVPLNVREGADKGIFLEGLSEEEVENAEEACEVLRRGYASRHIASTAMNSTSSRSHAVFTMVIDT 687
RR+TFD+ A QE +F +G+ + +C+ G+NGTIF YGQTGSGKT+T GP +G D E R G++PR EYLF + + +E+ G AVE + RCSF EIYNEQ+FDL + L++RE KG+F++GL E+ V +A EA +VL G+ +R +AST+MN SSRSHAVFT+ I++
Sbjct: 23 RRYTFDHVADINTTQEAVFGAVGKKIIESCVGGYNGTIFAYGQTGSGKTFTMLGPLDDGDDFRHELR---------------------GVIPRSFEYLFNLISRE----QEKRGDAVE-FVTRCSFLEIYNEQIFDL--LDTASTGLHLRENIKKGVFVDGLIEQNVTSAIEAHQVLSAGWVNRRVASTSMNRESSRSHAVFTLTIES 202
BLAST of mRNA_H-paniculata_contig2082.5414.1 vs. uniprot
Match: A0A0D2L9N3_9CHLO (Kinesin-like protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2L9N3_9CHLO) HSP 1 Score: 154 bits (389), Expect = 3.310e-42 Identity = 92/223 (41.26%), Postives = 124/223 (55.61%), Query Frame = 1
Query: 70 FTFDYAAAEEVRQEELFERIGRPVTNACLDGFNGTIFCYGQTGSGKTYTTFGPPPEGQDSLAEARHDRGPSTSIRS-----------PRDAASGRERGLVPRVLEYLFERFALQARAAKEQEGGAVEIYACRCSFYEIYNEQVFDLAVVGADKVPLNVREGADKGIFLEGLSEEEVENAEEACEVLRRGYASRHIASTAMNSTSSRSHAVFTMVIDTAVQFLP 705
F FD EE Q E+FE +G PV + CL G+N ++F YGQTG+GKT+T G G D+ A+ + P + + R + + RGL PRV EYLFER + +EQ+G + CRCS EIYNE + DL + L VRE +G ++EGLSEE V+N E+A +LRRG RH+ T +N SSRSH+VFT V++ V P
Sbjct: 38 FAFDDVLQEETGQAEVFETVGAPVVDNCLSGYNSSVFAYGQTGAGKTHTMTGRVAGGGDAAAQEQVGDAPGSGVGRLAGRGVAFMMVNRLSGCSQLRGLAPRVFEYLFERI----ESMQEQQGRDRLKFCCRCSMLEIYNEVITDL--LNPTATNLQVREDVKRGCYVEGLSEEIVQNVEDAMRLLRRGAEHRHVGETRLNRESSRSHSVFTCVVERVVVDRP 254
BLAST of mRNA_H-paniculata_contig2082.5414.1 vs. uniprot
Match: A0A067C775_SAPPC (Kinesin motor domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C775_SAPPC) HSP 1 Score: 160 bits (406), Expect = 3.310e-41 Identity = 94/209 (44.98%), Postives = 124/209 (59.33%), Query Frame = 1
Query: 64 RRFTFDYAAAEEVRQEELFERIGRPVTNACLDGFNGTIFCYGQTGSGKTYTTFGPPPEGQDSLAEARHDRGPSTSIRSPRDAASGR---ERGLVPRVLEYLFERFALQARAAKEQEGGAVEIYACRCSFYEIYNEQVFDLAVVGADKVPLNVREGADKGIFLEGLSEEEVENAEEACEVLRRGYASRHIASTAMNSTSSRSHAVFTMVI 681
R F FD E QE++F+ IGRP+T ACL+G+NGTIF YGQTGSGKT+T G D SGR +GLVPRVLEYLFE+ ++ +++ + +E Y CSF EIYNE+VFDL + LN+RE KG+F+EGL E VENA++A E++ G +RH+ T+MN SSRSH+VF + I
Sbjct: 51 RNFYFDRVFGERSTQEQVFDVIGRPITTACLEGYNGTIFAYGQTGSGKTFTMLG------------------------EEDQRSGRPNVNKGLVPRVLEYLFEKRDVRDASSEFEATSTIE-YKYICSFLEIYNERVFDLLDGSTSEAGLNLRENHVKGVFVEGLKEAIVENAQQATELMTIGTQNRHVGHTSMNRESSRSHSVFILQI 234 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2082.5414.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2082.5414.1 >prot_H-paniculata_contig2082.5414.1 ID=prot_H-paniculata_contig2082.5414.1|Name=mRNA_H-paniculata_contig2082.5414.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=258bp CVSVARDAKTVAWAGENGSTVRRFTFDYAAAEEVRQEELFERIGRPVTNAback to top mRNA from alignment at H-paniculata_contig2082:11608..19484+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2082.5414.1 ID=mRNA_H-paniculata_contig2082.5414.1|Name=mRNA_H-paniculata_contig2082.5414.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7877bp|location=Sequence derived from alignment at H-paniculata_contig2082:11608..19484+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2082:11608..19484+ >mRNA_H-paniculata_contig2082.5414.1 ID=mRNA_H-paniculata_contig2082.5414.1|Name=mRNA_H-paniculata_contig2082.5414.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1548bp|location=Sequence derived from alignment at H-paniculata_contig2082:11608..19484+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |