mRNA_H-paniculata_contig20801.5409.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig20801.5409.1
Unique NamemRNA_H-paniculata_contig20801.5409.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig20801.5409.1 vs. uniprot
Match: D7FQR4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQR4_ECTSI)

HSP 1 Score: 192 bits (487), Expect = 1.610e-53
Identity = 105/209 (50.24%), Postives = 138/209 (66.03%), Query Frame = 2
Query:    2 DPTMYSKAVLVNNAGAFAHIGPTNDIPSSLTLKQEVDLNVTACLWVTSRFSGLFGAK-------GSMKPPMTVTTNDAEPYQATQKAAIAAVSGLSSAGRNVVVNVSSSAAIKPIKFWGVYSAGKAARDMFHRVLALEQAEIEGLKVLNYAPGPMDTDMSAQVRESG-FNSSFE---YVNVDASASKCVRLALGGGFETGSHIDFFDSE 595
            DPT YS+AVLVNNAG+  HIG  + +PS    + E+D N+T+ LW++SRFS +FGAK        S++  +  +  D +   AT  AA A+   +     N+VVN+SS AA++P + WG YS+GKAARDMFHRVLA EQA I GLKVLNYAPGPM+TDMS  +R +  F    +    ++   SA KCVRLAL G F +GSH+DFFD +
Sbjct:   99 DPTRYSRAVLVNNAGSLGHIGVASALPSLAAFRSEMDFNITSALWLSSRFSAVFGAKRPNLSSGNSVEGTLGESGADVDKNGATT-AATASADTVHDVSNNIVVNISSLAALQPFETWGGYSSGKAARDMFHRVLATEQASIGGLKVLNYAPGPMNTDMSRDIRSAEQFEEDLQSGKLIDARVSAEKCVRLALHGTFASGSHVDFFDED 306          
BLAST of mRNA_H-paniculata_contig20801.5409.1 vs. uniprot
Match: A0A7S1U7H4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U7H4_9STRA)

HSP 1 Score: 121 bits (303), Expect = 4.590e-27
Identity = 76/202 (37.62%), Postives = 111/202 (54.95%), Query Frame = 2
Query:   20 KAVLVNNAGAFAHIGPTNDIPSSLTLKQEVDLNVTACLWVTSRFSGLFGAKGSMKPPMTVTTNDAEPYQATQKAAIAAVSGLSSAGRNVVVNVSSSAAIKPIKFWGVYSAGKAARDMFHRVLALEQAEIEGLKVLNYAPGPMDTDMSAQVRES---------GFNSSFEYVNV---DASASKCVRLALGGGFETGSHIDFFD 589
            + +LVNNAG    +G   +I S   ++ E+DLNVT+ +++T+ F+  FGA      P     +  E   A   A    +       +  ++NVSS AA +P + WG+Y AGKAAR++FH  LA EQA  +   VLNYAPGPMDT M A++R S             +FE  N+   + SA+K ++L     F +GSH+DF+D
Sbjct:  102 RIILVNNAGTIGGLGCIQEIESIKEMQTEMDLNVTSAMYITAAFARKFGA------PRADRLHAEENGHAGAAAGGMGMPPAPPRPQTFIINVSSLAAREPFQSWGMYCAGKAAREIFHAALAKEQAHCDSFYVLNYAPGPMDTAMQAEIRNSEATFQPLREASTQAFEDGNLVRPEDSANKLLQLIEDAEFISGSHLDFYD 297          
BLAST of mRNA_H-paniculata_contig20801.5409.1 vs. uniprot
Match: A0A6T8JR39_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8JR39_9STRA)

HSP 1 Score: 115 bits (289), Expect = 5.690e-26
Identity = 72/209 (34.45%), Postives = 108/209 (51.67%), Query Frame = 2
Query:    8 TMYSKAVLVNNAGAFAHIGPTNDIPSSLTLKQEVDLNVTACLWVTSRFSGLFGAKGSMKPPMTVTTNDAEPYQATQKAAIAAVSGLSSAGRNVVVNVSSSAAIKPIKFWGVYSAGKAARDMFHRVLALEQAEIEGLKVLNYAPGPMDTDMSAQVRESGFNSSFE-------------YVNVDASASKCVRLALGGGFETGSHIDFFDSE 595
            T+Y +A+L+NNAG+   IG ++ + S  TL+   DLNVT+ +W++S F   F     ++                                  VVN+SS  AI+P K  GVY AGKA RDMFH  +A+E  E EG+K+LNYAPG ++T+M+  + ES  N+  E             YV +  +A K V L +   F++G H+D++D +
Sbjct:   55 TLYERAILINNAGSIDPIGKSSQLTSLQTLRACNDLNVTSSIWLSSYFIRHFSQNHGIQS-------------------------------TTVVNISSLCAIQPFKTLGVYCAGKAYRDMFHETMAVE--EEEGVKILNYAPGAIETNMTRTIMESE-NTDNEVGENLKKMRDEKTYVKLSDTAQKLVNLVMSNNFQSGKHVDYWDED 229          
BLAST of mRNA_H-paniculata_contig20801.5409.1 vs. uniprot
Match: A0A7R9YBF2_9STRA (Sepiapterin reductase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBF2_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.130e-25
Identity = 77/203 (37.93%), Postives = 108/203 (53.20%), Query Frame = 2
Query:   17 SKAVLVNNAGAFAHIGPTNDIPSSLTLKQEVDLNVTACLWVTSRFSGLFGAKGSMKPPMTVTTNDAEPYQATQKAAIAAVSGLSSAGRNVVVNVSSSAAIKPIKFWGVYSAGKAARDMFHRVLALEQAEIEGLKVLNYAPGPMDTDMSAQVR----------ESGFNSSFE--YVNVDASASKCVRLALGGGFETGSHIDFFD 589
            S+ +LVNNAG    +G   ++    ++++ +DLNVT+C+ +T+ F+  FGA  S +         A   +  +  A              V+NVSS AA++P + WG Y   KAAR+MFHRVLA EQA  +   VLNYAPGPMDTDM AQ+R          E+G  +  E   V    SA   +RL     F +G+H D+FD
Sbjct:  117 SRVILVNNAGTVGDLGTVAELRDWQSVQKNLDLNVTSCMSLTAEFTRRFGAPRSDR---------AAAKELPRPEAF-------------VINVSSLAALEPFQTWGNYCVTKAAREMFHRVLAQEQAHCDTFHVLNYAPGPMDTDMQAQIRNSHGVFQPLREAGMQAFDEGNLVTPLESAEMLLRLIDDHEFTSGAHFDYFD 297          
BLAST of mRNA_H-paniculata_contig20801.5409.1 vs. uniprot
Match: A0A3M6VT50_9STRA (Sepiapterin reductase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VT50_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.740e-25
Identity = 73/205 (35.61%), Postives = 107/205 (52.20%), Query Frame = 2
Query:   14 YSKAVLVNNAGAFAHIGPTNDIPSS-LTLKQEVDLNVTACLWVTSRFSGLFGAKGSMKPPMTVTTNDAEPYQATQKAAIAAVSGLSSAGRNVVVNVSSSAAIKPIKFWGVYSAGKAARDMFHRVLALEQAEIEGLKVLNYAPGPMDTDMSAQVRESGF-----NSSFEYVNVDA-------SASKCVRLALGGGFETGSHIDFFD 589
            Y +  LV+NAG+   +G   +  SS + L Q  +LNVT+ +W+  RF  +FGA         V  N +   + TQ                V+VN++S   I+P K   +Y AGKAAR+M HRV+A EQA +  ++VL Y+PGPMDTDM   +RES          F  +  +        S+ + V LA+   FETG+H+D++D
Sbjct:   94 YDRVFLVHNAGSLGQLGLVQECASSPMELSQYWELNVTSVIWLNKRFLDVFGASREE----LVALNGSTSRKQTQL---------------VIVNITSLCGIEPFKTHMMYCAGKAAREMHHRVIATEQAAVGKVRVLQYSPGPMDTDMQKMIRESSLVDPELRKQFADMKANGTLVLPAQSSERGVTLAISEDFETGAHVDYYD 279          
BLAST of mRNA_H-paniculata_contig20801.5409.1 vs. uniprot
Match: A0A6A3RA53_9STRA (Sepiapterin reductase n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3RA53_9STRA)

HSP 1 Score: 115 bits (288), Expect = 2.340e-25
Identity = 72/205 (35.12%), Postives = 109/205 (53.17%), Query Frame = 2
Query:   14 YSKAVLVNNAGAFAHIGPTNDIPSSLT-LKQEVDLNVTACLWVTSRFSGLFGAKGSMKPPMTVTTNDAEPYQATQKAAIAAVSGLSSAGRNVVVNVSSSAAIKPIKFWGVYSAGKAARDMFHRVLALEQAEIEGLKVLNYAPGPMDTDMSAQVRESG-----FNSSFEYVNVDA-------SASKCVRLALGGGFETGSHIDFFD 589
            Y++  LV+NAG+   +G  ++  S+ T L Q  +LNVT+ LW+  RF  +FGA    +  +   T+  E  Q                   V+VN++S   I+P K   +Y +GKAAR+M HRV+A EQ     ++VL Y+PGPMDTDM   +RES          FE +           S+ + V+LA+ G +ETG+H+D++D
Sbjct:   91 YARVFLVHNAGSLGQLGLVHECASNPTELAQYWELNVTSVLWLNKRFLDVFGAS---RDELLAATSAEEKTQL------------------VIVNITSLCGIEPFKTHMMYCSGKAAREMHHRVIATEQEAAGKVRVLQYSPGPMDTDMQKTIRESPRVDPELRKQFEDMKAQGTLIPPAQSSQRGVKLAISGDYETGAHVDYYD 274          
BLAST of mRNA_H-paniculata_contig20801.5409.1 vs. uniprot
Match: A0A2P4XZ23_9STRA (Sepiapterin reductase n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XZ23_9STRA)

HSP 1 Score: 115 bits (288), Expect = 2.550e-25
Identity = 73/208 (35.10%), Postives = 111/208 (53.37%), Query Frame = 2
Query:   14 YSKAVLVNNAGAFAHIGPTNDIPSSLT-LKQEVDLNVTACLWVTSRFSGLFGAKGSMKPPMTVTTNDAEPYQATQKAAIAAVSGLSSAGRNVVVNVSSSAAIKPIKFWGVYSAGKAARDMFHRVLALEQAEIEGLKVLNYAPGPMDTDMSAQVRESGF---NSSFEYVNVDA---------SASKCVRLALGGGFETGSHIDFFDSEK 598
            Y +  LV+NAG+   +G   +  SS T L Q  +LNVT+ LW+  RF  +FGA  S    +T +  D +  Q                   V+VN++S   I+P K   +Y +GKAAR+M HRV+A EQ+     +VL Y+PGPMDTDM   +RES         ++ ++ A         S+ + V+LA+ G +ETG+H+D++D + 
Sbjct:   94 YDRVFLVHNAGSLGQLGLVQECASSPTELTQYWELNVTSVLWLNKRFLDVFGA--SRDELLTTSATDEKQTQL------------------VIVNITSLCGIEPFKTHMMYCSGKAAREMHHRVIATEQSVAGKTRVLQYSPGPMDTDMQTTIRESPLVDPQLRKQFADMKAQGTLIPPAQSSERGVKLAISGEYETGTHVDYYDLDS 281          
BLAST of mRNA_H-paniculata_contig20801.5409.1 vs. uniprot
Match: A0A1V9YGZ4_9STRA (Sepiapterin reductase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGZ4_9STRA)

HSP 1 Score: 115 bits (287), Expect = 2.650e-25
Identity = 75/203 (36.95%), Postives = 104/203 (51.23%), Query Frame = 2
Query:   17 SKAVLVNNAGAFAHIGPTNDIPSSLTLKQEVDLNVTACLWVTSRFSGLFGAKGSMKPPMTVTTNDAEPYQATQKAAIAAVSGLSSAGRNVVVNVSSSAAIKPIKFWGVYSAGKAARDMFHRVLALEQAEIEGLKVLNYAPGPMDTDMSAQVRESG------------FNSSFEYVNVDASASKCVRLALGGGFETGSHIDFFD 589
            S+ VLV+NAG+   IG   D+ S   +++ +++NV++ +W   RF  +FG +         TT  A P                    +V+VNVSS  AI+P      Y   KAARDM HRV+A+EQ     +K LNYAPGPMDTDM   +RES               +S  YV+   SA+ CV+   G  F +GSHID++D
Sbjct:   96 SQVVLVHNAGSLGEIGLAQDLSSVAMMQEHMEVNVSSVMWFNKRFLDVFGTR---------TTMAAGPG-------------------HVIVNVSSLNAIEPFATCNTYCVIKAARDMHHRVIAVEQGST--VKTLNYAPGPMDTDMQLALRESNRTDATLKSMFQQLKTSNTYVDTLVSATLCVQHIFGPTFVSGSHIDYYD 268          
BLAST of mRNA_H-paniculata_contig20801.5409.1 vs. uniprot
Match: D0NIS8_PHYIT (Sepiapterin reductase, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NIS8_PHYIT)

HSP 1 Score: 113 bits (282), Expect = 4.060e-25
Identity = 70/205 (34.15%), Postives = 105/205 (51.22%), Query Frame = 2
Query:   14 YSKAVLVNNAGAFAHIGPTNDIPSSLT-LKQEVDLNVTACLWVTSRFSGLFGAKGSMKPPMTVTTNDAEPYQATQKAAIAAVSGLSSAGRNVVVNVSSSAAIKPIKFWGVYSAGKAARDMFHRVLALEQAEIEGLKVLNYAPGPMDTDMSAQVRES------------GFNSSFEYVNVDASASKCVRLALGGGFETGSHIDFFD 589
            Y +  LV+NAG+   +G   +  +S T L Q  +LNVT+ LW+  RF  +FGA           +N+                      + V+VNV+S   I+P K   +Y  GKAAR+M HRV+A EQA I  ++VL Y+PGPMDTDM   +RE+               +    +    S+ + V+LA+ G +ETG+H+D++D
Sbjct:   28 YDRVYLVHNAGSLGQLGLVQECATSPTDLSQYWELNVTSVLWLNKRFLDVFGASRDELLAPAAPSNEKH-------------------AQLVIVNVTSLCGIEPFKTHMLYCTGKAAREMHHRVVATEQAAIGKVRVLQYSPGPMDTDMQKTLRETPQLDPELRKQFADMKAKGALIPPAQSSERGVKLAISGDYETGAHVDYYD 213          
BLAST of mRNA_H-paniculata_contig20801.5409.1 vs. uniprot
Match: A0A1W0A4C1_9STRA (Sepiapterin reductase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A4C1_9STRA)

HSP 1 Score: 114 bits (286), Expect = 5.010e-25
Identity = 72/202 (35.64%), Postives = 106/202 (52.48%), Query Frame = 2
Query:   20 KAVLVNNAGAFAHIGPTNDIPSSLTLKQEVDLNVTACLWVTSRFSGLFGAKGSMKPPMTVTTNDAEPYQATQKAAIAAVSGLSSAGRNVVVNVSSSAAIKPIKFWGVYSAGKAARDMFHRVLALEQAEIEGLKVLNYAPGPMDTDMSAQVRESG---------FN---SSFEYVNVDASASKCVRLALGGGFETGSHIDFFD 589
            + ++V+NAG    IG   D+ S   L+  ++LNV++ +W   RF  LFG            T D+    +T K              +++VN+SS  AI+P      Y   KAARDM HRV+A+EQ  I  +K LNYAPGPMDT+M  ++RES          FN   ++  YV+   SA+ C++   G  F +GSH+D++D
Sbjct:  110 QVIIVHNAGTLGEIGLVQDLSSIEMLQDHMELNVSSVMWFNKRFLDLFG------------TRDSTAQVSTGK------------NSHIIVNISSLNAIEPFATCNTYCVIKAARDMHHRVIAIEQGNI--VKTLNYAPGPMDTNMQLELRESKHTNEKLKNMFNQLKANNTYVDTLTSATLCIKHVYGTNFVSGSHVDYYD 285          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20801.5409.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQR4_ECTSI1.610e-5350.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1U7H4_9STRA4.590e-2737.62Hypothetical protein (Fragment) n=2 Tax=Phaeomonas... [more]
A0A6T8JR39_9STRA5.690e-2634.45Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7R9YBF2_9STRA1.130e-2537.93Sepiapterin reductase n=1 Tax=Pinguiococcus pyreno... [more]
A0A3M6VT50_9STRA1.740e-2535.61Sepiapterin reductase n=1 Tax=Peronospora effusa T... [more]
A0A6A3RA53_9STRA2.340e-2535.12Sepiapterin reductase n=3 Tax=Phytophthora TaxID=4... [more]
A0A2P4XZ23_9STRA2.550e-2535.10Sepiapterin reductase n=2 Tax=Phytophthora palmivo... [more]
A0A1V9YGZ4_9STRA2.650e-2536.95Sepiapterin reductase n=1 Tax=Achlya hypogyna TaxI... [more]
D0NIS8_PHYIT4.060e-2534.15Sepiapterin reductase, putative n=1 Tax=Phytophtho... [more]
A0A1W0A4C1_9STRA5.010e-2535.64Sepiapterin reductase n=1 Tax=Thraustotheca clavat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20801contigH-paniculata_contig20801:1317..3288 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score189.5
Seed ortholog evalue1.5e-45
Seed eggNOG ortholog2880.D7FQR4
Preferred nameSPR
KEGG rclassRC00017,RC00425,RC00602,RC00823,RC02162
KEGG koko:K00072,ko:K05858,ko:K16489
KEGG ReactionR01813,R02975,R03332,R03435,R08208,R10952,R11762,R11763
KEGG Pathwayko00562,ko00790,ko01100,ko04015,ko04020,ko04022,ko04062,ko04070,ko04071,ko04072,ko04261,ko04270,ko04310,ko04371,ko04540,ko04611,ko04621,ko04713,ko04720,ko04723,ko04724,ko04725,ko04726,ko04728,ko04730,ko04745,ko04750,ko04911,ko04912,ko04915,ko04916,ko04918,ko04919,ko04921,ko04922,ko04924,ko04925,ko04926,ko04927,ko04933,ko04934,ko04961,ko04970,ko04971,ko04972,ko05010,ko05016,ko05142,ko05143,ko05146,ko05200,map00562,map00790,map01100,map04015,map04020,map04022,map04062,map04070,map04071,map04072,map04261,map04270,map04310,map04371,map04540,map04611,map04621,map04713,map04720,map04723,map04724,map04725,map04726,map04728,map04730,map04745,map04750,map04911,map04912,map04915,map04916,map04918,map04919,map04921,map04922,map04924,map04925,map04926,map04927,map04933,map04934,map04961,map04970,map04971,map04972,map05010,map05016,map05142,map05143,map05146,map05200
KEGG ModuleM00130,M00842
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000902,GO:0000904,GO:0001505,GO:0003674,GO:0003824,GO:0004033,GO:0004757,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006066,GO:0006082,GO:0006520,GO:0006558,GO:0006584,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0006809,GO:0006950,GO:0006979,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0009058,GO:0009072,GO:0009108,GO:0009653,GO:0009712,GO:0009987,GO:0010033,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0018958,GO:0019222,GO:0019438,GO:0019751,GO:0019752,GO:0019889,GO:0022008,GO:0030154,GO:0030182,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032768,GO:0032989,GO:0034311,GO:0034312,GO:0034641,GO:0036094,GO:0040008,GO:0040014,GO:0042133,GO:0042136,GO:0042221,GO:0042415,GO:0042417,GO:0042428,GO:0042430,GO:0042558,GO:0042559,GO:0042802,GO:0042803,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046209,GO:0046483,GO:0046983,GO:0048037,GO:0048468,GO:0048638,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050661,GO:0050662,GO:0050789,GO:0050790,GO:0050793,GO:0050879,GO:0050881,GO:0050882,GO:0050896,GO:0050999,GO:0051186,GO:0051188,GO:0051239,GO:0051341,GO:0055114,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0071704,GO:0071840,GO:0072593,GO:0097159,GO:0097164,GO:1901160,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901615,GO:1901617,GO:1902221,GO:1903409,GO:2001057
EggNOG free text desc.sepiapterin reductase
EggNOG OGsCOG1028@1,KOG1204@2759
EC1.1.1.153,3.1.4.11
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03036,ko04131,ko04147
Exons2
Model size1510
Cds size606
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20801.5409.1prot_H-paniculata_contig20801.5409.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig20801 2211..3278 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929544.9001365-UTR-H-paniculata_contig20801:1316..22101622929544.9001365-UTR-H-paniculata_contig20801:1316..2210Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20801 1317..2210 -
1691480907.3469424-UTR-H-paniculata_contig20801:1316..22101691480907.3469424-UTR-H-paniculata_contig20801:1316..2210Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20801 1317..2210 -
1622929544.946698-UTR-H-paniculata_contig20801:3278..32881622929544.946698-UTR-H-paniculata_contig20801:3278..3288Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20801 3279..3288 -
1691480907.3844879-UTR-H-paniculata_contig20801:3278..32881691480907.3844879-UTR-H-paniculata_contig20801:3278..3288Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20801 3279..3288 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929544.9156225-CDS-H-paniculata_contig20801:2210..24481622929544.9156225-CDS-H-paniculata_contig20801:2210..2448Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20801 2211..2448 -
1691480907.3601828-CDS-H-paniculata_contig20801:2210..24481691480907.3601828-CDS-H-paniculata_contig20801:2210..2448Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20801 2211..2448 -
1622929544.933709-CDS-H-paniculata_contig20801:2910..32781622929544.933709-CDS-H-paniculata_contig20801:2910..3278Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20801 2911..3278 -
1691480907.3732123-CDS-H-paniculata_contig20801:2910..32781691480907.3732123-CDS-H-paniculata_contig20801:2910..3278Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20801 2911..3278 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig20801.5409.1

>prot_H-paniculata_contig20801.5409.1 ID=prot_H-paniculata_contig20801.5409.1|Name=mRNA_H-paniculata_contig20801.5409.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=202bp
MYSKAVLVNNAGAFAHIGPTNDIPSSLTLKQEVDLNVTACLWVTSRFSGL
FGAKGSMKPPMTVTTNDAEPYQATQKAAIAAVSGLSSAGRNVVVNVSSSA
AIKPIKFWGVYSAGKAARDMFHRVLALEQAEIEGLKVLNYAPGPMDTDMS
AQVRESGFNSSFEYVNVDASASKCVRLALGGGFETGSHIDFFDSEKYAAD
V*
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mRNA from alignment at H-paniculata_contig20801:1317..3288-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig20801.5409.1 ID=mRNA_H-paniculata_contig20801.5409.1|Name=mRNA_H-paniculata_contig20801.5409.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1972bp|location=Sequence derived from alignment at H-paniculata_contig20801:1317..3288- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGATCCTACTATGTACTCTAAAGCGGTACTAGTGAACAATGCTGGAGCGT TCGCGCACATAGGCCCCACGAACGACATTCCGTCCTCTCTCACCTTGAAG CAAGAGGTGGATCTGAACGTCACAGCTTGTCTCTGGGTCACTTCGCGCTT CTCCGGGCTATTCGGGGCGAAGGGGTCCATGAAACCGCCGATGACAGTAA CGACCAACGACGCTGAACCATATCAAGCGACACAGAAGGCTGCTATCGCT GCTGTTTCTGGACTGTCATCTGCGGGCAGAAATGTGGTCGTCAATGTGTC ATCGTCAGCGGCCATTAAGCCGATCAAATTCTGGGGCGTGTATTCGGCGG GGAAGGCCGCGCGGGACATGTTTCACAGGCAAGCTAAAATACCCTAATAA ACAGAATCCTTTGAAAATGTCGTGCGTAGTTGAACTCTTACCTTTTACGA TTATACTTAAGACCATCAGGGCAAATAACTAATGAAAATCATCTTCGAAA ACGAGGTTGAGGACACAAGAAGCTAAAAATAGATTGCCCCATGTAGGAAC ATTTTCGAACTCCAGGAAGCACGTTCAGTTTCTTGTGTACAAAAGGTCAA CAGGTGCAAAACGAAAGGAAACGTGGTGAATAAAAAATCAGCTCTCACTG CTACGATGTGGTTCTACCGGTTATCCAAGTGACCATCCGTGGTGTGTGCC ACGGCCAATGACTTCGTGCACATATTAGAGTAAAGTCTGCCTAACCTTGA TTTCTTGGCGCTGAAACGTGCATATTCGATCAGTCGTCAGTCATCTTACC CTGGCGTTTTGCCCGATACCCACCCCCATCTTCGCAACAGAGTGTTGGCT CTGGAACAAGCCGAAATCGAAGGCCTGAAGGTTTTGAACTATGCCCCGGG TCCTATGGACACGGATATGAGCGCTCAGGTTCGCGAGAGTGGATTCAACT CTTCTTTCGAGTACGTAAACGTCGATGCGTCGGCGTCGAAGTGCGTGCGA CTTGCACTGGGAGGTGGCTTTGAGACGGGGTCGCACATTGACTTCTTCGA TTCGGAGAAATATGCAGCTGATGTCTAACGTACGGTTTCGCCTGTGGGAA ACGTTTAACCTGTGTTCGTTATCTCGAGGCTTCGACGGGTTTGGGCTTGT AGTGCGAGCGTAAAGACAAAAATGGTGGAGCTTTTATTTTGGTGTAGGCG TGGGAAAGTGACGGAGAGTACCAAAGGGGAGCACACGATGGCTTCCTCAT GTCTTTCCTCCAATCCGTAAGATAAAACGGATCCGAATCAGATTCCACGT ACATACGAGCCGGTTTCGGGACAAGAAATAAGAATCAAAACAATATTGAA CTTCAAAAATGCTCCTAGAACATTCGCAACCGTTACGCCAGTACAGTCAG TCTCACACGCATACTTGGGCTGAATCAAGGATAGAGATGGGAGAACCACC TAACATGCGTTTACATGGACAAGCTCTCCATCACGAGTCTGAGTGATAGG AAATATGTGTTGGGGAAGAAGAAACAAATTATATATATATTTCAACTTCC TATATCCGACAAAACTGTGATAACCCTGTGGGTCCATTGGGTCGACAGTA AAAATTGCTGGAATATTCCCAGTATACATTCTGTATGTTTGGAGAATACA AATGCTGTGAAGGATACCTGTGGTTATGTTGGAACATCCCTTGGAAACTG AAACCCATTCCTATTGATGCGTTGAGGGGAAATAAAAAGAGGGATCACGA TGAAAACTAACAGATGAAAAAGATCTGAGAACAAAGAACCGTTTATCGCT GCTTTACCCTCACAACGATCAGGGACCTACAGGAACGAACCTACATCAAA TCTCAAAATGAGTAAATATTATTTGTTGTCCGATACTATGCATTAATTTT CCCATCTGGATCCTTAGACTCGGGTATGAAGAATAGCCCAACAATCGTAG GTTTTTATTAGACCGCGAAGAG
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Coding sequence (CDS) from alignment at H-paniculata_contig20801:1317..3288-

>mRNA_H-paniculata_contig20801.5409.1 ID=mRNA_H-paniculata_contig20801.5409.1|Name=mRNA_H-paniculata_contig20801.5409.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1212bp|location=Sequence derived from alignment at H-paniculata_contig20801:1317..3288- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTACTCTAAAGCGGTACTAGTGAACAATGCTGGAGCGTTCGCGCACAT
AGGCCCCACGAACGACATTCCGTCCTCTCTCACCTTGAAGCAAGAGGTGG
ATCTGAACGTCACAGCTTGTCTCTGGGTCACTTCGCGCTTCTCCGGGCTA
TTCGGGGCGAAGGGGTCCATGAAACCGCCGATGACAGTAACGACCAACGA
CGCTGAACCATATCAAGCGACACAGAAGGCTGCTATCGCTGCTGTTTCTG
GACTGTCATCTGCGGGCAGAAATGTGGTCGTCAATGTGTCATCGTCAGCG
GCCATTAAGCCGATCAAATTCTGGGGCGTGTATTCGGCGGGGAAGGCCGC
GCGGGACATGTTTCACAGATGTACTCTAAAGCGGTACTAGTGAACAATGC
TGGAGCGTTCGCGCACATAGGCCCCACGAACGACATTCCGTCCTCTCTCA
CCTTGAAGCAAGAGGTGGATCTGAACGTCACAGCTTGTCTCTGGGTCACT
TCGCGCTTCTCCGGGCTATTCGGGGCGAAGGGGTCCATGAAACCGCCGAT
GACAGTAACGACCAACGACGCTGAACCATATCAAGCGACACAGAAGGCTG
CTATCGCTGCTGTTTCTGGACTGTCATCTGCGGGCAGAAATGTGGTCGTC
AATGTGTCATCGTCAGCGGCCATTAAGCCGATCAAATTCTGGGGCGTGTA
TTCGGCGGGGAAGGCCGCGCGGGACATGTTTCACAGAGTGTTGGCTCTGG
AACAAGCCGAAATCGAAGGCCTGAAGGTTTTGAACTATGCCCCGGGTCCT
ATGGACACGGATATGAGCGCTCAGGTTCGCGAGAGTGGATTCAACTCTTC
TTTCGAGTACGTAAACGTCGATGCGTCGGCGTCGAAGTGCGTGCGACTTG
CACTGGGAGGTGGCTTTGAGACGGGGTCGCACATTGACTTCTTCGATTCG
GAGAAATATGCAGCTGATGTCTAAAGTGTTGGCTCTGGAACAAGCCGAAA
TCGAAGGCCTGAAGGTTTTGAACTATGCCCCGGGTCCTATGGACACGGAT
ATGAGCGCTCAGGTTCGCGAGAGTGGATTCAACTCTTCTTTCGAGTACGT
AAACGTCGATGCGTCGGCGTCGAAGTGCGTGCGACTTGCACTGGGAGGTG
GCTTTGAGACGGGGTCGCACATTGACTTCTTCGATTCGGAGAAATATGCA
GCTGATGTCTAA
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