mRNA_H-paniculata_contig20801.5409.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig20801.5409.1 vs. uniprot
Match: D7FQR4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQR4_ECTSI) HSP 1 Score: 192 bits (487), Expect = 1.610e-53 Identity = 105/209 (50.24%), Postives = 138/209 (66.03%), Query Frame = 2
Query: 2 DPTMYSKAVLVNNAGAFAHIGPTNDIPSSLTLKQEVDLNVTACLWVTSRFSGLFGAK-------GSMKPPMTVTTNDAEPYQATQKAAIAAVSGLSSAGRNVVVNVSSSAAIKPIKFWGVYSAGKAARDMFHRVLALEQAEIEGLKVLNYAPGPMDTDMSAQVRESG-FNSSFE---YVNVDASASKCVRLALGGGFETGSHIDFFDSE 595
DPT YS+AVLVNNAG+ HIG + +PS + E+D N+T+ LW++SRFS +FGAK S++ + + D + AT AA A+ + N+VVN+SS AA++P + WG YS+GKAARDMFHRVLA EQA I GLKVLNYAPGPM+TDMS +R + F + ++ SA KCVRLAL G F +GSH+DFFD +
Sbjct: 99 DPTRYSRAVLVNNAGSLGHIGVASALPSLAAFRSEMDFNITSALWLSSRFSAVFGAKRPNLSSGNSVEGTLGESGADVDKNGATT-AATASADTVHDVSNNIVVNISSLAALQPFETWGGYSSGKAARDMFHRVLATEQASIGGLKVLNYAPGPMNTDMSRDIRSAEQFEEDLQSGKLIDARVSAEKCVRLALHGTFASGSHVDFFDED 306
BLAST of mRNA_H-paniculata_contig20801.5409.1 vs. uniprot
Match: A0A7S1U7H4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U7H4_9STRA) HSP 1 Score: 121 bits (303), Expect = 4.590e-27 Identity = 76/202 (37.62%), Postives = 111/202 (54.95%), Query Frame = 2
Query: 20 KAVLVNNAGAFAHIGPTNDIPSSLTLKQEVDLNVTACLWVTSRFSGLFGAKGSMKPPMTVTTNDAEPYQATQKAAIAAVSGLSSAGRNVVVNVSSSAAIKPIKFWGVYSAGKAARDMFHRVLALEQAEIEGLKVLNYAPGPMDTDMSAQVRES---------GFNSSFEYVNV---DASASKCVRLALGGGFETGSHIDFFD 589
+ +LVNNAG +G +I S ++ E+DLNVT+ +++T+ F+ FGA P + E A A + + ++NVSS AA +P + WG+Y AGKAAR++FH LA EQA + VLNYAPGPMDT M A++R S +FE N+ + SA+K ++L F +GSH+DF+D
Sbjct: 102 RIILVNNAGTIGGLGCIQEIESIKEMQTEMDLNVTSAMYITAAFARKFGA------PRADRLHAEENGHAGAAAGGMGMPPAPPRPQTFIINVSSLAAREPFQSWGMYCAGKAAREIFHAALAKEQAHCDSFYVLNYAPGPMDTAMQAEIRNSEATFQPLREASTQAFEDGNLVRPEDSANKLLQLIEDAEFISGSHLDFYD 297
BLAST of mRNA_H-paniculata_contig20801.5409.1 vs. uniprot
Match: A0A6T8JR39_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8JR39_9STRA) HSP 1 Score: 115 bits (289), Expect = 5.690e-26 Identity = 72/209 (34.45%), Postives = 108/209 (51.67%), Query Frame = 2
Query: 8 TMYSKAVLVNNAGAFAHIGPTNDIPSSLTLKQEVDLNVTACLWVTSRFSGLFGAKGSMKPPMTVTTNDAEPYQATQKAAIAAVSGLSSAGRNVVVNVSSSAAIKPIKFWGVYSAGKAARDMFHRVLALEQAEIEGLKVLNYAPGPMDTDMSAQVRESGFNSSFE-------------YVNVDASASKCVRLALGGGFETGSHIDFFDSE 595
T+Y +A+L+NNAG+ IG ++ + S TL+ DLNVT+ +W++S F F ++ VVN+SS AI+P K GVY AGKA RDMFH +A+E E EG+K+LNYAPG ++T+M+ + ES N+ E YV + +A K V L + F++G H+D++D +
Sbjct: 55 TLYERAILINNAGSIDPIGKSSQLTSLQTLRACNDLNVTSSIWLSSYFIRHFSQNHGIQS-------------------------------TTVVNISSLCAIQPFKTLGVYCAGKAYRDMFHETMAVE--EEEGVKILNYAPGAIETNMTRTIMESE-NTDNEVGENLKKMRDEKTYVKLSDTAQKLVNLVMSNNFQSGKHVDYWDED 229
BLAST of mRNA_H-paniculata_contig20801.5409.1 vs. uniprot
Match: A0A7R9YBF2_9STRA (Sepiapterin reductase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBF2_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.130e-25 Identity = 77/203 (37.93%), Postives = 108/203 (53.20%), Query Frame = 2
Query: 17 SKAVLVNNAGAFAHIGPTNDIPSSLTLKQEVDLNVTACLWVTSRFSGLFGAKGSMKPPMTVTTNDAEPYQATQKAAIAAVSGLSSAGRNVVVNVSSSAAIKPIKFWGVYSAGKAARDMFHRVLALEQAEIEGLKVLNYAPGPMDTDMSAQVR----------ESGFNSSFE--YVNVDASASKCVRLALGGGFETGSHIDFFD 589
S+ +LVNNAG +G ++ ++++ +DLNVT+C+ +T+ F+ FGA S + A + + A V+NVSS AA++P + WG Y KAAR+MFHRVLA EQA + VLNYAPGPMDTDM AQ+R E+G + E V SA +RL F +G+H D+FD
Sbjct: 117 SRVILVNNAGTVGDLGTVAELRDWQSVQKNLDLNVTSCMSLTAEFTRRFGAPRSDR---------AAAKELPRPEAF-------------VINVSSLAALEPFQTWGNYCVTKAAREMFHRVLAQEQAHCDTFHVLNYAPGPMDTDMQAQIRNSHGVFQPLREAGMQAFDEGNLVTPLESAEMLLRLIDDHEFTSGAHFDYFD 297
BLAST of mRNA_H-paniculata_contig20801.5409.1 vs. uniprot
Match: A0A3M6VT50_9STRA (Sepiapterin reductase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VT50_9STRA) HSP 1 Score: 115 bits (289), Expect = 1.740e-25 Identity = 73/205 (35.61%), Postives = 107/205 (52.20%), Query Frame = 2
Query: 14 YSKAVLVNNAGAFAHIGPTNDIPSS-LTLKQEVDLNVTACLWVTSRFSGLFGAKGSMKPPMTVTTNDAEPYQATQKAAIAAVSGLSSAGRNVVVNVSSSAAIKPIKFWGVYSAGKAARDMFHRVLALEQAEIEGLKVLNYAPGPMDTDMSAQVRESGF-----NSSFEYVNVDA-------SASKCVRLALGGGFETGSHIDFFD 589
Y + LV+NAG+ +G + SS + L Q +LNVT+ +W+ RF +FGA V N + + TQ V+VN++S I+P K +Y AGKAAR+M HRV+A EQA + ++VL Y+PGPMDTDM +RES F + + S+ + V LA+ FETG+H+D++D
Sbjct: 94 YDRVFLVHNAGSLGQLGLVQECASSPMELSQYWELNVTSVIWLNKRFLDVFGASREE----LVALNGSTSRKQTQL---------------VIVNITSLCGIEPFKTHMMYCAGKAAREMHHRVIATEQAAVGKVRVLQYSPGPMDTDMQKMIRESSLVDPELRKQFADMKANGTLVLPAQSSERGVTLAISEDFETGAHVDYYD 279
BLAST of mRNA_H-paniculata_contig20801.5409.1 vs. uniprot
Match: A0A6A3RA53_9STRA (Sepiapterin reductase n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3RA53_9STRA) HSP 1 Score: 115 bits (288), Expect = 2.340e-25 Identity = 72/205 (35.12%), Postives = 109/205 (53.17%), Query Frame = 2
Query: 14 YSKAVLVNNAGAFAHIGPTNDIPSSLT-LKQEVDLNVTACLWVTSRFSGLFGAKGSMKPPMTVTTNDAEPYQATQKAAIAAVSGLSSAGRNVVVNVSSSAAIKPIKFWGVYSAGKAARDMFHRVLALEQAEIEGLKVLNYAPGPMDTDMSAQVRESG-----FNSSFEYVNVDA-------SASKCVRLALGGGFETGSHIDFFD 589
Y++ LV+NAG+ +G ++ S+ T L Q +LNVT+ LW+ RF +FGA + + T+ E Q V+VN++S I+P K +Y +GKAAR+M HRV+A EQ ++VL Y+PGPMDTDM +RES FE + S+ + V+LA+ G +ETG+H+D++D
Sbjct: 91 YARVFLVHNAGSLGQLGLVHECASNPTELAQYWELNVTSVLWLNKRFLDVFGAS---RDELLAATSAEEKTQL------------------VIVNITSLCGIEPFKTHMMYCSGKAAREMHHRVIATEQEAAGKVRVLQYSPGPMDTDMQKTIRESPRVDPELRKQFEDMKAQGTLIPPAQSSQRGVKLAISGDYETGAHVDYYD 274
BLAST of mRNA_H-paniculata_contig20801.5409.1 vs. uniprot
Match: A0A2P4XZ23_9STRA (Sepiapterin reductase n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XZ23_9STRA) HSP 1 Score: 115 bits (288), Expect = 2.550e-25 Identity = 73/208 (35.10%), Postives = 111/208 (53.37%), Query Frame = 2
Query: 14 YSKAVLVNNAGAFAHIGPTNDIPSSLT-LKQEVDLNVTACLWVTSRFSGLFGAKGSMKPPMTVTTNDAEPYQATQKAAIAAVSGLSSAGRNVVVNVSSSAAIKPIKFWGVYSAGKAARDMFHRVLALEQAEIEGLKVLNYAPGPMDTDMSAQVRESGF---NSSFEYVNVDA---------SASKCVRLALGGGFETGSHIDFFDSEK 598
Y + LV+NAG+ +G + SS T L Q +LNVT+ LW+ RF +FGA S +T + D + Q V+VN++S I+P K +Y +GKAAR+M HRV+A EQ+ +VL Y+PGPMDTDM +RES ++ ++ A S+ + V+LA+ G +ETG+H+D++D +
Sbjct: 94 YDRVFLVHNAGSLGQLGLVQECASSPTELTQYWELNVTSVLWLNKRFLDVFGA--SRDELLTTSATDEKQTQL------------------VIVNITSLCGIEPFKTHMMYCSGKAAREMHHRVIATEQSVAGKTRVLQYSPGPMDTDMQTTIRESPLVDPQLRKQFADMKAQGTLIPPAQSSERGVKLAISGEYETGTHVDYYDLDS 281
BLAST of mRNA_H-paniculata_contig20801.5409.1 vs. uniprot
Match: A0A1V9YGZ4_9STRA (Sepiapterin reductase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGZ4_9STRA) HSP 1 Score: 115 bits (287), Expect = 2.650e-25 Identity = 75/203 (36.95%), Postives = 104/203 (51.23%), Query Frame = 2
Query: 17 SKAVLVNNAGAFAHIGPTNDIPSSLTLKQEVDLNVTACLWVTSRFSGLFGAKGSMKPPMTVTTNDAEPYQATQKAAIAAVSGLSSAGRNVVVNVSSSAAIKPIKFWGVYSAGKAARDMFHRVLALEQAEIEGLKVLNYAPGPMDTDMSAQVRESG------------FNSSFEYVNVDASASKCVRLALGGGFETGSHIDFFD 589
S+ VLV+NAG+ IG D+ S +++ +++NV++ +W RF +FG + TT A P +V+VNVSS AI+P Y KAARDM HRV+A+EQ +K LNYAPGPMDTDM +RES +S YV+ SA+ CV+ G F +GSHID++D
Sbjct: 96 SQVVLVHNAGSLGEIGLAQDLSSVAMMQEHMEVNVSSVMWFNKRFLDVFGTR---------TTMAAGPG-------------------HVIVNVSSLNAIEPFATCNTYCVIKAARDMHHRVIAVEQGST--VKTLNYAPGPMDTDMQLALRESNRTDATLKSMFQQLKTSNTYVDTLVSATLCVQHIFGPTFVSGSHIDYYD 268
BLAST of mRNA_H-paniculata_contig20801.5409.1 vs. uniprot
Match: D0NIS8_PHYIT (Sepiapterin reductase, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NIS8_PHYIT) HSP 1 Score: 113 bits (282), Expect = 4.060e-25 Identity = 70/205 (34.15%), Postives = 105/205 (51.22%), Query Frame = 2
Query: 14 YSKAVLVNNAGAFAHIGPTNDIPSSLT-LKQEVDLNVTACLWVTSRFSGLFGAKGSMKPPMTVTTNDAEPYQATQKAAIAAVSGLSSAGRNVVVNVSSSAAIKPIKFWGVYSAGKAARDMFHRVLALEQAEIEGLKVLNYAPGPMDTDMSAQVRES------------GFNSSFEYVNVDASASKCVRLALGGGFETGSHIDFFD 589
Y + LV+NAG+ +G + +S T L Q +LNVT+ LW+ RF +FGA +N+ + V+VNV+S I+P K +Y GKAAR+M HRV+A EQA I ++VL Y+PGPMDTDM +RE+ + + S+ + V+LA+ G +ETG+H+D++D
Sbjct: 28 YDRVYLVHNAGSLGQLGLVQECATSPTDLSQYWELNVTSVLWLNKRFLDVFGASRDELLAPAAPSNEKH-------------------AQLVIVNVTSLCGIEPFKTHMLYCTGKAAREMHHRVVATEQAAIGKVRVLQYSPGPMDTDMQKTLRETPQLDPELRKQFADMKAKGALIPPAQSSERGVKLAISGDYETGAHVDYYD 213
BLAST of mRNA_H-paniculata_contig20801.5409.1 vs. uniprot
Match: A0A1W0A4C1_9STRA (Sepiapterin reductase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A4C1_9STRA) HSP 1 Score: 114 bits (286), Expect = 5.010e-25 Identity = 72/202 (35.64%), Postives = 106/202 (52.48%), Query Frame = 2
Query: 20 KAVLVNNAGAFAHIGPTNDIPSSLTLKQEVDLNVTACLWVTSRFSGLFGAKGSMKPPMTVTTNDAEPYQATQKAAIAAVSGLSSAGRNVVVNVSSSAAIKPIKFWGVYSAGKAARDMFHRVLALEQAEIEGLKVLNYAPGPMDTDMSAQVRESG---------FN---SSFEYVNVDASASKCVRLALGGGFETGSHIDFFD 589
+ ++V+NAG IG D+ S L+ ++LNV++ +W RF LFG T D+ +T K +++VN+SS AI+P Y KAARDM HRV+A+EQ I +K LNYAPGPMDT+M ++RES FN ++ YV+ SA+ C++ G F +GSH+D++D
Sbjct: 110 QVIIVHNAGTLGEIGLVQDLSSIEMLQDHMELNVSSVMWFNKRFLDLFG------------TRDSTAQVSTGK------------NSHIIVNISSLNAIEPFATCNTYCVIKAARDMHHRVIAIEQGNI--VKTLNYAPGPMDTNMQLELRESKHTNEKLKNMFNQLKANNTYVDTLTSATLCIKHVYGTNFVSGSHVDYYD 285 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20801.5409.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig20801.5409.1 >prot_H-paniculata_contig20801.5409.1 ID=prot_H-paniculata_contig20801.5409.1|Name=mRNA_H-paniculata_contig20801.5409.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=202bp MYSKAVLVNNAGAFAHIGPTNDIPSSLTLKQEVDLNVTACLWVTSRFSGLback to top mRNA from alignment at H-paniculata_contig20801:1317..3288- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig20801.5409.1 ID=mRNA_H-paniculata_contig20801.5409.1|Name=mRNA_H-paniculata_contig20801.5409.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1972bp|location=Sequence derived from alignment at H-paniculata_contig20801:1317..3288- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig20801:1317..3288- >mRNA_H-paniculata_contig20801.5409.1 ID=mRNA_H-paniculata_contig20801.5409.1|Name=mRNA_H-paniculata_contig20801.5409.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1212bp|location=Sequence derived from alignment at H-paniculata_contig20801:1317..3288- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |