mRNA_H-paniculata_contig2075.5389.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig2075.5389.1 vs. uniprot
Match: A0A6H5KM10_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KM10_9PHAE) HSP 1 Score: 1041 bits (2691), Expect = 0.000e+0 Identity = 590/847 (69.66%), Postives = 659/847 (77.80%), Query Frame = 3
Query: 240 MMAKKKKGPAADALAALEALEMEENATAPVEEPQTPPAPNLKKAKTKKKKGAXXXXXXXXXXXXXXXAEGTPLLSEADSQQLAGSHVTGDAEVTTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQHVSMTQAVDQEQHEEEVHQVEPAAKTXXXXXXXXXXXXXXPLNGESGEAHDMVRNDKDLTFLEDEANQLPELELVPTEIVQEEETLEDKIRKSRPPPRVRISTSAQPGFVSLRLDGVAVTFRNQEVVKDASWEVKTGDRLGLVGPNGGGKTTQVKILAGELEPTAGELVKSSKDLRVSFLRQEFVDELVMERSLKDELVSVFVDEAKILSELQACEDKLQEDAVQQDPTAMEDVLNRLAKLQDEAERNHVYDLGTKVQRIMDVMGFSIRQGRANEGEQPVSSFSGGWRMRIGLGKILLTDPNILLLDEPTNHLDMESVEWLESFLQNQNLPMVIVSHDREFLDRVCTGIVDTDGGIAVSYPGNYSRFLKLKSARMDSWQAAYRNQQKKIKDERAWINKFKTKGSWAAQVKSRQKALEKLLASDDYVKQPPNMGKPFRFRFPPAPRAGSGEEVLLTQGLSHGYNGRYLFEDVDMNVGKGERIAFLGPNGAGKSTLLRLIVGQENPTSGTCTLGSNVVKQYFEQNQADVLDLSKTVIETMMGASTTEKYEDLRKLLGQFLFRGDAVEKSVEQLSGGEKARVALCKMMLTPANLLVLDEPTNHLDIPAKEMLEEALQHYEGSVLVVSHDRYFVSQVATTICNLEDGNLVRYDGDYRFFLERHDNLLEKVESRYVAGVDGIKKAKRVDLEELARQKKTFGGKGGPSGRKDKGVKNAKRHAEQV 2780
MMAKK+KGPAADALA LEALE E + E PP P KK KKKKG XXXXXXXXXXXXXX G L + +A T P + V +A + E EV+ ++P + L+ GE D ++ +Q E P E +ETLE KIRKSRPPPRVRIS+S+QPGFVSLRL+GVAVTFRNQEVVKDA+W+VKTGDR+GLVGPNGGGKTTQVKILAG+LEPTAGE++KSSKDLRV+FLRQEFVDELVMERSLKDEL+SVF +EA IL+ LQ CED P ME VLNRL+ LQ++AERN VYDL TKVQR+MD+MGF I +EGEQPVSSFSGGWRMRIGLGKILL DPNILLLDEPTNHLDMESVEWLESFLQNQNLPMVIVSHDREFLDRVCTGIVDTDGG+AVSYPGNYS F+KLK AR++SWQA+Y+NQQKKIK+ER WINKFK+KG+WAAQVKSRQKAL+KL+ASDD+VKQPPNMGKPFRFRFPPAPR + EEV+ G+SHGYNGR LF DV++ V KGERIAFLGPNGAGKSTLLRL+VGQE P G+C LGS VVKQYFEQNQADVLDLS TVIET+M AST EKYEDLRKLLGQFLF+GDAV+KSVEQLSGGEKARV+LCKMMLTPANLLVLDEPTNHLDIPAKEMLEEALQHYEGSVLVVSHDRYFVSQVATTICNLE+ LVRYDGDYR+FLE + N+LEKVESRYVAG+ GI+KAKRVDLEE+ R KK+FGGKGGPSGRKDKGVKNAKR+ ++V
Sbjct: 3 MMAKKRKGPAADALAQLEALEAELEPVSVDVEGSPPPLPKQKK--NKKKKGPKXXXXXXXXXXXXXXXXGESLPPYLRTSIAWMDIPAAEAAATAPPA----------------------------EHEVDRKEA---REAEVEVNLLQPPPRPKKGKKKRGAGGIEERLDDFKGEG--------DEKMVDHGPSQ--EETATPKEAEVGKETLESKIRKSRPPPRVRISSSSQPGFVSLRLEGVAVTFRNQEVVKDATWDVKTGDRIGLVGPNGGGKTTQVKILAGDLEPTAGEVIKSSKDLRVAFLRQEFVDELVMERSLKDELISVFTEEAAILAALQRCED----------PAKMEGVLNRLSNLQEDAERNRVYDLSTKVQRVMDLMGFQI-----SEGEQPVSSFSGGWRMRIGLGKILLKDPNILLLDEPTNHLDMESVEWLESFLQNQNLPMVIVSHDREFLDRVCTGIVDTDGGVAVSYPGNYSNFIKLKRARLESWQASYKNQQKKIKEERNWINKFKSKGAWAAQVKSRQKALDKLIASDDFVKQPPNMGKPFRFRFPPAPRMSASEEVVSANGVSHGYNGRRLFSDVNLVVEKGERIAFLGPNGAGKSTLLRLVVGQEEPEEGSCRLGSGVVKQYFEQNQADVLDLSLTVIETLMKASTGEKYEDLRKLLGQFLFKGDAVDKSVEQLSGGEKARVSLCKMMLTPANLLVLDEPTNHLDIPAKEMLEEALQHYEGSVLVVSHDRYFVSQVATTICNLEEEKLVRYDGDYRYFLESNGNILEKVESRYVAGLSGIQKAKRVDLEEMRRSKKSFGGKGGPSGRKDKGVKNAKRNTDKV 791
BLAST of mRNA_H-paniculata_contig2075.5389.1 vs. uniprot
Match: A0A7S1GT33_HEMAN (Hypothetical protein n=3 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GT33_HEMAN) HSP 1 Score: 769 bits (1985), Expect = 1.950e-260 Identity = 395/635 (62.20%), Postives = 501/635 (78.90%), Query Frame = 3
Query: 876 TLEDKIRKSRPPPRVRISTSAQPGFVSLRLDGVAVTFRNQEVVKDASWEVKTGDRLGLVGPNGGGKTTQVKILAGELEPTAGELVKSSKDLRVSFLRQEFVDELVMERSLKDELVSVFVDEAKILSELQACEDKLQEDAVQQDPTAMEDVLNRLAKLQDEAERNHVYDLGTKVQRIMDVMGFSIRQGRANEGEQPVSSFSGGWRMRIGLGKILLTDPNILLLDEPTNHLDMESVEWLESFLQNQNLPMVIVSHDREFLDRVCTGIVDTDGGIAVSYPGNYSRFLKLKSARMDSWQAAYRNQQKKIKDERAWINKFKTKGSWAAQVKSRQKALEKLLASDDYVKQPPNMGKPFRFRFPPAPRAGSGEEVLLTQGLSHGYN--GRY-LFEDVDMNVGKGERIAFLGPNGAGKSTLLRLIVGQENPTSGTCTLGS-NVVKQYFEQNQADVLDLSKTVIETMMGASTTE-KYEDLRKLLGQFLFRGDAVEKSVEQLSGGEKARVALCKMMLTPANLLVLDEPTNHLDIPAKEMLEEALQHYEGSVLVVSHDRYFVSQVATTICNLEDGNLVRYDGDYRFFLERHDNLLEKVESRYVAGVDGIKKAKRVDLEELARQKKTFGGKGGPSGRKDKGVKNAKR 2765
TLE K +K+RPPPR+RI + QPG+VS+RLD V V F+NQ+V D SW V+TGDR+GLVG NGGGKTTQ++++ GELEPT+GE++KS+ DLR+SFLRQEFVDELV R+L++EL+SVF +E K+ EL + L++ V+ DP M++ L+R+A LQ +A+ V L ++V++IMD+MGF++ EGE V+SFSGGW+MRIGLGKILLT+PN+LLLDEPTNHLD+ES+EW+E FL NQ +PMVIVSHDREFLDRVCT VD DGG SY GNYSRFLKLK+A +SWQ+AY NQ K++K ++ +IN+FK+ G+ A+Q SRQK L+KL+ASD +VK+PP +GKP RFRFPPAPR G G V+ QG+SHGY GR LF+DV++ V KGERIAFLGPNG GKST +RL+ G+E GT +G NV+ Y+EQNQADVLDL KTV++TM A+ +YE++R LLGQFLF+GD V K + LSGGEKARVALC MML+PANLLVLDEPTNHLDIPAKEMLEEALQ+++G+VLV+SHDRYFVSQVA TIC ED +VRY+GDY+F++++++ EKVE+RYV GV+GIK K V++ A KK FGG SG+KDKGVKNAKR
Sbjct: 227 TLEQKAKKNRPPPRIRIESGVQPGYVSVRLDKVNVIFKNQQVCTDCSWGVQTGDRVGLVGANGGGKTTQLRVMYGELEPTSGEVIKSAADLRISFLRQEFVDELVPSRTLREELMSVFAEEMKVFDELDNYDKVLEQ--VKDDPDKMQEALDRMADLQKQADSMGVAQLASRVEKIMDLMGFAVE-----EGENLVASFSGGWKMRIGLGKILLTEPNLLLLDEPTNHLDLESIEWMEQFLINQKIPMVIVSHDREFLDRVCTKTVDCDGGTTTSYDGNYSRFLKLKAAARESWQSAYDNQMKRVKQDKDFINRFKS-GAQASQAASRQKKLDKLMASDTWVKKPPTLGKPLRFRFPPAPRLGDGYAVVRCQGVSHGYPEAGRGGLFDDVNLTVEKGERIAFLGPNGCGKSTFMRLVAGKEEQNEGTVEIGGENVLMNYYEQNQADVLDLDKTVLDTMKYAADGRMEYEEIRALLGQFLFKGDTVNKKLGMLSGGEKARVALCTMMLSPANLLVLDEPTNHLDIPAKEMLEEALQYFDGTVLVISHDRYFVSQVANTICAFEDSKMVRYNGDYKFYMDKNEEWKEKVENRYVDGVEGIKNLKEVEIVNHA-VKKNFGGSAVTSGKKDKGVKNAKR 852
BLAST of mRNA_H-paniculata_contig2075.5389.1 vs. uniprot
Match: A0A7S2XN49_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XN49_9STRA) HSP 1 Score: 769 bits (1987), Expect = 6.340e-260 Identity = 394/641 (61.47%), Postives = 500/641 (78.00%), Query Frame = 3
Query: 876 TLEDKIRKSRPPPRVRISTSAQPGFVSLRLDGVAVTFRNQEVVKDASWEVKTGDRLGLVGPNGGGKTTQVKILAGELEPTAGELVKSSKDLRVSFLRQEFVDELVMERSLKDELVSVFVDEAKILSELQACEDKLQEDAVQQDPTAMEDVLNRLAKLQDEAERNHVYDLGTKVQRIMDVMGFSIRQGRANEGEQPVSSFSGGWRMRIGLGKILLTDPNILLLDEPTNHLDMESVEWLESFLQNQNLPMVIVSHDREFLDRVCTGIVDTDGGIAVSYPGNYSRFLKLKSARMDSWQAAYRNQQKKIKDERAWINKFKTKGSWAAQVKSRQKALEKLLASDDYVKQPPNMGKPFRFRFPPAPRAGSGEEVLLTQGLSHGYNGRY----LFEDVDMNVGKGERIAFLGPNGAGKSTLLRLIVGQENPTSGTCTL-GSNVVKQYFEQNQADVLDLSKTVIETMMGASTTEKYEDLRKLLGQFLFRGDAVEKSVEQLSGGEKARVALCKMMLTPANLLVLDEPTNHLDIPAKEMLEEALQHYEGSVLVVSHDRYFVSQVATTICNLEDGNLVRYDGDYRFFLERHDNLLEKVESRYVAGVDGIKKAKRVDLEELARQKKTFGGK--GGPSGRKDKGVKNAKRHAEQ 2777
TLE+KIRK RPPPR+R+ SAQP F SLRL+ V +TFR+QEV+KD +W V+TGDR+GLVG NG GKTTQ++I++GE+EPT G++VKSSKDLRV+ LRQEFVDELV++R+LK+E +SVF +E KIL +L+ E +L++ + +DP M+ +L+ + +LQ +A+ VY L +K +++MD+MGF+ EGE VS FSGGW+MRIGLGK+LL DPNILLLDEPTNHLD++SVEWLE+FL+NQN+PMVIVSHDREFLD+VCT IVD +GGI Y GNYSRFL LK ARMD+WQA+Y Q+KK+K+ERAWINKFK K A VK R+ LEK LASDDYVK+PP GKPFRFRFP APR EV + LSH Y LF+ V++ + +G+RIA LGPNG+GKSTLLR+++G+E+P G+ + G NVV YFEQNQAD LDLSKTV++T+ G S + Y +LR LLGQFLF+GDAVEK VE LSGGEKAR++LC MML PANLL+LDEPTNHLDIPAKEMLEEALQH++GSV+V+SHDRYF+S+ ATTI +ED L +Y GDY+F++++ +++ EKVE+RYV GV I A +D+EEL + K+ FGG RKDKG+KNAKR Q
Sbjct: 280 TLEEKIRKERPPPRIRVMESAQPNFSSLRLENVGITFRDQEVLKDVTWGVQTGDRIGLVGANGAGKTTQLRIMSGEMEPTTGDVVKSSKDLRVAILRQEFVDELVLDRTLKEEFMSVFEEENKILQDLRDAESELEQLSSTEDPERMQQILDSMQRLQGKADAKDVYSLESKAKKVMDLMGFTTE-----EGEDLVSMFSGGWKMRIGLGKVLLQDPNILLLDEPTNHLDLQSVEWLEAFLRNQNIPMVIVSHDREFLDQVCTKIVDAEGGICNEYDGNYSRFLDLKKARMDAWQASYDAQEKKMKEERAWINKFKVKQPQA--VKQRKAKLEKQLASDDYVKRPPTFGKPFRFRFPDAPRLSP--EVAEVKDLSHSYGNEKTTNKLFDKVNLFIERGDRIAVLGPNGSGKSTLLRIMMGKEDPDEGSAEIIGQNVVANYFEQNQADALDLSKTVVDTVQGESNNQSYNELRALLGQFLFKGDAVEKKVEFLSGGEKARLSLCCMMLRPANLLILDEPTNHLDIPAKEMLEEALQHFQGSVIVISHDRYFISKCATTIVAIEDKALTKYAGDYKFYMDKSEHVKEKVEARYVKGVQRIGAAPVIDIEELTKPKRNFGGAKTANQVTRKDKGIKNAKRQQPQ 911
BLAST of mRNA_H-paniculata_contig2075.5389.1 vs. uniprot
Match: A0A6U2Q7G8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2Q7G8_9STRA) HSP 1 Score: 754 bits (1948), Expect = 2.210e-257 Identity = 393/635 (61.89%), Postives = 507/635 (79.84%), Query Frame = 3
Query: 876 TLEDKIRKSRPPPRVRISTSAQPGFVSLRLDGVAVTFRNQEVVKDASWEVKTGDRLGLVGPNGGGKTTQVKILAGELEPTAGELVKSSKDLRVSFLRQEFVDELVMERSLKDELVSVFVDEAKILSELQACEDKLQEDAVQQDPTAMEDVLNRLAKLQDEAERNHVYDLGTKVQRIMDVMGFSIRQGRANEGEQPVSSFSGGWRMRIGLGKILLTDPNILLLDEPTNHLDMESVEWLESFLQNQNLPMVIVSHDREFLDRVCTGIVDTDGGIAVSYPGNYSRFLKLKSARMDSWQAAYRNQQKKIKDERAWINKFKTKGSWAAQVKSRQKALEKLLASDDYVKQPPNMGKPFRFRFPPAPRAGSGEEVLLTQGLSHGY-NG-RYLFEDVDMNVGKGERIAFLGPNGAGKSTLLRLIVGQENPTSGTCTL-GSNVVKQYFEQNQADVLDLSKTVIETMMGASTTEKYEDLRKLLGQFLFRGDAVEKSVEQLSGGEKARVALCKMMLTPANLLVLDEPTNHLDIPAKEMLEEALQHYEGSVLVVSHDRYFVSQVATTICNLEDGNLVRYDGDYRFFLERHDNLLEKVESRYVAGVDGIKKAKRVDLEELARQKKTFGGKGGPS--GRKDKGVKNAKR 2765
TLE++I+K RPPPRVR+ QPG+V+LRL+ VAVTFRNQEV+KD +W V+TGDR+GLVG NGGGKTTQ+KIL GELEPT G++VKSSKDLRV+ LRQEFVDELVM+R+L++E +SVF +EA+IL++L+ACE +L+E A +P M+ +L+R+ KLQ++A+ VY+L ++V++IM++MG++ EGE V FSGGW+MRIGLGK+LL DPN+LLLDEP+NHLD+ES+EWLE FL++QN+PM+IVSHDREFLD+VCT IVDTDGG + Y GNYSRFL+LK ARM SWQAAY Q+KKIK+E+AW+NKF+ K AA K R +EKL S DY+++PP +GKPF+FRFP APR EV + LSHGY NG LF++V++ V K +RIA LGPNG+GKSTLLRL++G+E P G + G+N+V YFEQNQADVLDL+KTV ET+ GAST + Y +LR L+GQFLF+GD+V+K VE LSGGEK+R++LC MML PANLL+LDEPTNHLDIPAKEMLEEALQH+EGS+L++SHDRYFVS+VATTI +ED LV+Y GDY+F++++ + +KV SRYV+ I+ A VD +E+ ++K FGG + RKDKGVKNAKR
Sbjct: 64 TLEERIKKERPPPRVRVMEGVQPGYVNLRLENVAVTFRNQEVLKDVTWGVQTGDRIGLVGANGGGKTTQLKILNGELEPTTGDVVKSSKDLRVAMLRQEFVDELVMDRTLREEFLSVFEEEAQILNDLRACEKELEELA---NPDDMQGILDRMEKLQNKADAKEVYNLESRVEKIMNLMGYT-----PEEGEDLVRMFSGGWKMRIGLGKVLLKDPNVLLLDEPSNHLDLESIEWLEEFLRSQNIPMIIVSHDREFLDQVCTKIVDTDGGKSYEYDGNYSRFLQLKKARMQSWQAAYDAQEKKIKEEKAWVNKFRAKQPDAA--KQRLAKIEKLQKSPDYIQRPPFVGKPFKFRFPDAPRMSP--EVCNIRNLSHGYGNGLNPLFDNVELYVEKYDRIAILGPNGSGKSTLLRLLMGREEPDEGEAHITGANIVANYFEQNQADVLDLTKTVTETVEGASTEQSYNELRALMGQFLFKGDSVQKKVENLSGGEKSRLSLCCMMLKPANLLILDEPTNHLDIPAKEMLEEALQHFEGSLLLISHDRYFVSKVATTIVAIEDKKLVKYPGDYKFYMDKVKEVKDKVTSRYVSDFK-IENAVSVDFDEINKKKGNFGGARTANLVTRKDKGVKNAKR 685
BLAST of mRNA_H-paniculata_contig2075.5389.1 vs. uniprot
Match: A0A7S0BZE2_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BZE2_9STRA) HSP 1 Score: 746 bits (1926), Expect = 1.340e-254 Identity = 389/640 (60.78%), Postives = 495/640 (77.34%), Query Frame = 3
Query: 867 EEETLEDKIRKSRPPPRVRISTSAQPGFVSLRLDGVAVTFRNQEVVKDASWEVKTGDRLGLVGPNGGGKTTQVKILAGELEPTAGELVKSSKDLRVSFLRQEFVDELVMERSLKDELVSVFVDEAKILSELQACEDKLQEDAVQQDPTAMEDVLNRLAKLQDEAERNHVYDLGTKVQRIMDVMGFSIRQGRANEGEQPVSSFSGGWRMRIGLGKILLTDPNILLLDEPTNHLDMESVEWLESFLQNQNLPMVIVSHDREFLDRVCTGIVDTDGGIAVSYPGNYSRFLKLKSARMDSWQAAYRNQQKKIKDERAWINKFKTKGSWAAQVKSRQKALEKLLASDDYVKQPPNMGKPFRFRFPPAPRAGSGEEVLLTQGLSHGYNG--RYLFEDVDMNVGKGERIAFLGPNGAGKSTLLRLIVGQENPTSGTCTL-GSNVVKQYFEQNQADVLDLSKTVIETMMGASTTEKYEDLRKLLGQFLFRGDAVEKSVEQLSGGEKARVALCKMMLTPANLLVLDEPTNHLDIPAKEMLEEALQHYEGSVLVVSHDRYFVSQVATTICNLEDGNLVRYDGDYRFFLERHDNLLEKVESRYVAGVDGIKKAKRVDLEELARQKKTFGGK--GGPSGRKDKGVKNAKRHA 2771
E+ TLE++IRK RPPP++R+ QPG+VSLRL+ V++ FRNQEV+K +W TGDR+GLVG NGGGKTTQ++ILAGE+EPTAG++VKSSKDLRVS LRQEFV+EL +RSLK+E +SVF +E +L+EL+A E +L E+ D AM+ L+R+A +Q +A+ Y L ++V+++MD+MGF+ A+E + PV+ FSGGW+MRIGLGK+L DPN+LLLDEPTNHLD+ESVEWLE+FL+NQN+PM+IVSHDREFLD+VCT IVDT+GG+A Y GNYSRFL+LK AR+ +WQ++Y Q+KKIK+ERAWINKF+ K A VK +Q L+KL SD YV++PP +GKP +FRFP APR EV +GLSH Y G L EDV++ V KG+RIA +GPNG+GKSTLLRL++G+E P G+ + G N+V YFEQNQADVLDL TV ET+ GAS + Y +LR L+GQFLF+GDAVEK + LSGGEKARV+LC MML PANLL+LDEPTNHLDIPAKEMLEEALQH+ GS+++VSHDR+F+S+VATTI +E + +Y GDY+F+LE+ L EK+E RYV GV I A VDLEEL KK FGG G RKDKG+KNAKR++
Sbjct: 25 EKVTLEERIRKERPPPKIRVMEGVQPGYVSLRLEDVSIIFRNQEVLKGVTWGCSTGDRVGLVGANGGGKTTQIRILAGEIEPTAGDVVKSSKDLRVSVLRQEFVEELDPDRSLKEEFLSVFEEENALLAELRAAEAEL-ENLDGSDTDAMQTCLDRMADVQAKADAKDCYSLESRVEKVMDLMGFT-----ADERDDPVAVFSGGWKMRIGLGKVLCKDPNVLLLDEPTNHLDLESVEWLENFLRNQNIPMIIVSHDREFLDQVCTKIVDTEGGVAHEYDGNYSRFLQLKEARLGAWQSSYDAQEKKIKEERAWINKFRAKQPVA--VKQKQAQLDKLTKSDKYVQKPPFVGKPLKFRFPDAPRLSP--EVADIKGLSHSYGGGINRLLEDVELYVEKGDRIAVVGPNGSGKSTLLRLLMGKETPDEGSAAIVGQNIVANYFEQNQADVLDLDLTVSETIQGASNGQSYNELRALMGQFLFKGDAVEKKIRNLSGGEKARVSLCCMMLRPANLLILDEPTNHLDIPAKEMLEEALQHFAGSLIIVSHDRFFISRVATTIVAIEAKKITKYAGDYKFYLEKSKALKEKIEGRYVPGVQKIHAAPVVDLEELLVPKKNFGGAKTAGLVTRKDKGIKNAKRNS 654
BLAST of mRNA_H-paniculata_contig2075.5389.1 vs. uniprot
Match: A0A7S1BSK8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BSK8_9STRA) HSP 1 Score: 746 bits (1925), Expect = 1.620e-253 Identity = 395/656 (60.21%), Postives = 493/656 (75.15%), Query Frame = 3
Query: 834 ELELVPTEIVQEEE-----TLEDKIRKSRPPPRVRISTSAQPGFVSLRLDGVAVTFRNQEVVKDASWEVKTGDRLGLVGPNGGGKTTQVKILAGELEPTAGELVKSSKDLRVSFLRQEFVDELVMERSLKDELVSVFVDEAKILSELQACEDKLQEDAVQQDPTAMEDVLNRLAKLQDEAERNHVYDLGTKVQRIMDVMGFSIRQGRANEGEQPVSSFSGGWRMRIGLGKILLTDPNILLLDEPTNHLDMESVEWLESFLQNQNLPMVIVSHDREFLDRVCTGIVDTDGGIAVSYPGNYSRFLKLKSARMDSWQAAYRNQQKKIKDERAWINKFKTKGSWAAQVKSRQKALEKLLASDDYVKQPPNMGKPFRFRFPPAPRAGSGEEVLLTQGLSHGYNGRYLFEDVDMNVGKGERIAFLGPNGAGKSTLLRLIVGQENPTSGTC-TLGSNVVKQYFEQNQADVLDLSKTVIETMMGASTTEKYEDLRKLLGQFLFRGDAVEKSVEQLSGGEKARVALCKMMLTPANLLVLDEPTNHLDIPAKEMLEEALQHYEGSVLVVSHDRYFVSQVATTICNLEDGNLVRYDGDYRFFLERHDNLLEKVESRYVAGVDGIKKAKRVDLEELARQKKTFGGKGGPS--GRKDKGVKNAKRHAEQ 2777
E+ VPT V+E E TLE+KIRK RPPPRVRI AQPGFVSL L+ V VTF+NQEV+K ASW V TGDR+GLVGPNGGGKTTQ++IL G+LEPT G++VKSS +LRV+ L+QEFVD LV RSL DE +SVF +E +IL L+ CE+ L D D M+ L+R+ LQ +A+ VY + + ++ MD+MGF+ E EQPVSSFSGGW+MRIGLGK+L DPN+LLLDEPTNHLD++SVEWLE+FL+ QN+PMVIVSHDREFLD+VC IVDT+GG+A Y GNYS FLK K AR+D+W AY NQ+KKIK+E+ WINKFK K A VK RQ LEK L S DY+++PP +GKPFRFRFP APR G+ EV + L HGY+G LFEDV++ + K ERIA +GPNGAGKSTLLR++ G+E P G +GSNV+ YFEQNQAD LDL KTV +T+ GAS+ + Y +LR L+GQFLF+GD+V+K V LSGGEKAR++LC MML PANLLVLDEPTNHLDIPAKEMLEEALQH+ GS++++SHDRYFVS+VA +IC +E L RY GDYR+++E+ KVE+RYV GV+ I+ A +V LEE + + FGG + +K+KGVKNAKR++ +
Sbjct: 71 EIPAVPTAGVEEPEEKKQLTLEEKIRKERPPPRVRIMEGAQPGFVSLALENVGVTFKNQEVIKGASWGVTTGDRIGLVGPNGGGKTTQLRILGGDLEPTVGDVVKSSSELRVAMLKQEFVDALVPTRSLVDEFMSVFEEENQILENLKTCEEDLA-DIDASDTDKMQATLDRMEDLQAKADAKGVYQIRARAEKAMDLMGFTTE-----EREQPVSSFSGGWKMRIGLGKVLCLDPNVLLLDEPTNHLDLDSVEWLEAFLREQNIPMVIVSHDREFLDQVCNKIVDTEGGLATKYDGNYSTFLKQKKARLDAWNTAYNNQEKKIKEEKQWINKFKVKQPEA--VKQRQAKLEKKLKSKDYIQKPPFVGKPFRFRFPDAPRLGA--EVATIKDLKHGYDGELLFEDVNLEIQKLERIAIIGPNGAGKSTLLRILTGKEEPQEGESGIIGSNVIMNYFEQNQADSLDLDKTVEDTVAGASSNQSYNELRALMGQFLFKGDSVKKKVANLSGGEKARLSLCCMMLRPANLLVLDEPTNHLDIPAKEMLEEALQHFMGSLVLISHDRYFVSKVANSICAVESKKLERYAGDYRYYMEKSAEWRAKVEARYVNGVERIESAPKVSLEE-ENKSRNFGGAKTANLVTKKNKGVKNAKRNSSK 715
BLAST of mRNA_H-paniculata_contig2075.5389.1 vs. uniprot
Match: B8C0S4_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0S4_THAPS) HSP 1 Score: 738 bits (1905), Expect = 4.600e-252 Identity = 380/623 (61.00%), Postives = 492/623 (78.97%), Query Frame = 3
Query: 933 SAQPGFVSLRLDGVAVTFRNQEVVKDASWEVKTGDRLGLVGPNGGGKTTQVKILAGELEPTAGELVKSSKDLRVSFLRQEFVDELVMERSLKDELVSVFVDEAKILSELQACEDKLQE---DAVQQDPTAMEDVLNRLAKLQDEAERNHVYDLGTKVQRIMDVMGFSIRQGRANEGEQPVSSFSGGWRMRIGLGKILLTDPNILLLDEPTNHLDMESVEWLESFLQNQNLPMVIVSHDREFLDRVCTGIVDTDGGIAVSYPGNYSRFLKLKSARMDSWQAAYRNQQKKIKDERAWINKFKTKGSWAAQVKSRQKALEKLLASDDYVKQPPNMGKPFRFRFPPAPRAGSGEEVLLTQGLSHGYN--GRYLFEDVDMNVGKGERIAFLGPNGAGKSTLLRLIVGQENPTSGTCTL-GSNVVKQYFEQNQADVLDLSKTVIETMMGASTTEKYEDLRKLLGQFLFRGDAVEKSVEQLSGGEKARVALCKMMLTPANLLVLDEPTNHLDIPAKEMLEEALQHYEGSVLVVSHDRYFVSQVATTICNLEDGNLVRYDGDYRFFLERHDNLLEKVESRYVAGVDGIKKAKRVDLEELARQKKTFGGKGGPS--GRKDKGVKNAKRHAEQ 2777
S+QP + +LRL+ +A+TFR+Q V++ A+W V+TGDR+GLVG NG GKTTQ++I+AGELEPTAG++VKS KDLRV+ LRQEF+DE+ +ER+L+DE +SVF +EA+I+ +L+ E++L + DAV D AM++VL+R+AKLQ++A+ +V L ++V +IMD+MGF EG+ V FSGGW+MRIGLGK+LL DPNILLLDEPTNHLD+ESVEWLE+FL+NQN+PMVIVSHDREFLD+VCT IVD +GGI Y GNYS+FL+LK ARMDSW A+Y Q+KKIK+E+ WINKF+ K A VK R+ LEKL+ S DY+++PP GKPFRFRFP APR EV +GL+HGY LFED D+ + KG+RIA +GPNGAGKSTLLR+++G+E P G+ + GSNV YFEQNQADVLDL KTV+ET+ GAS+ + Y +LR LLGQFLF+GDAVEK VE LSGGEKAR++LC MML +NLL+LDEPTNHLDIPAKEMLEEALQH++GSV+V+SHDRYF+S+VATTI +ED L++Y GDY+F++++ + + EK+E+RYV+G+D I A +DLEEL + KK FGG + RK+KGVKNAKR E+
Sbjct: 3 SSQPDYSALRLENIAITFRDQPVLQSATWGVQTGDRIGLVGANGAGKTTQLRIMAGELEPTAGDVVKSKKDLRVAMLRQEFIDEIDLERTLRDEFMSVFTEEAEIMEQLREAEEQLGQMSGDAV--DADAMQEVLDRMAKLQNKADDKNVNALDSRVSKIMDLMGFD-----PEEGDYTVGMFSGGWKMRIGLGKVLLKDPNILLLDEPTNHLDLESVEWLEAFLRNQNIPMVIVSHDREFLDQVCTKIVDAEGGICSEYNGNYSKFLQLKKARMDSWHASYNAQEKKIKEEKQWINKFRLKQPQA--VKQREAQLEKLVKSSDYIQKPPFFGKPFRFRFPAAPRLSP--EVAEVKGLTHGYGDGANRLFEDTDLFIEKGDRIAIIGPNGAGKSTLLRILMGKEQPDEGSAEIVGSNVYPAYFEQNQADVLDLDKTVVETIQGASSGQSYNELRALLGQFLFKGDAVEKKVENLSGGEKARLSLCCMMLKESNLLILDEPTNHLDIPAKEMLEEALQHFDGSVVVISHDRYFISKVATTIVAIEDKKLIKYGGDYKFYMDKSEYVKEKIEARYVSGLDRIGNAPVIDLEELQKPKKNFGGAKTANMVTRKNKGVKNAKRKEEK 614
BLAST of mRNA_H-paniculata_contig2075.5389.1 vs. uniprot
Match: A0A6U5KNE9_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A6U5KNE9_9STRA) HSP 1 Score: 741 bits (1913), Expect = 2.120e-250 Identity = 383/638 (60.03%), Postives = 490/638 (76.80%), Query Frame = 3
Query: 876 TLEDKIRKSRPPPRVRISTSAQPGFVSLRLDGVAVTFRNQEVVKDASWEVKTGDRLGLVGPNGGGKTTQVKILAGELEPTAGELVKSSKDLRVSFLRQEFVDELVMERSLKDELVSVFVDEAKILSELQACEDKLQEDAVQQDPTAMEDVLNRLAKLQDEAERNHVYDLGTKVQRIMDVMGFSIRQGRANEGEQPVSSFSGGWRMRIGLGKILLTDPNILLLDEPTNHLDMESVEWLESFLQNQNLPMVIVSHDREFLDRVCTGIVDTDGGIAVSYPGNYSRFLKLKSARMDSWQAAYRNQQKKIKDERAWINKFKTKGSWAAQVKSRQKALEKLLASDDYVKQPPNMGKPFRFRFPPAPRAGSGEEVLLTQGLSHGY-NGRY---LFEDVDMNVGKGERIAFLGPNGAGKSTLLRLIVGQENPTSGTCTL-GSNVVKQYFEQNQADVLDLSKTVIETMMGASTTEKYEDLRKLLGQFLFRGDAVEKSVEQLSGGEKARVALCKMMLTPANLLVLDEPTNHLDIPAKEMLEEALQHYEGSVLVVSHDRYFVSQVATTICNLEDGNLVRYDGDYRFFLERHDNLLEKVESRYVAGVDGIKKAKRVDLEELA-RQKKTFGGK--GGPSGRKDKGVKNAKR 2765
TLE+KIRK RPPPR+R+ SAQPG+ +LRL+ V + FR QEV+KD +W V+TGDR+GLVG NG GKTTQ++I+AGEL+PT G++VKSS+DLRV+ LRQEFVDELV++R+L +E +SVFV+E ++L +++ E L+ + D M++VL+R+ +LQ +AE VY L +++MD+MGF+ +EGE V SFSGGW+MRIGLGK+LL +PNILLLDEPTNHLD+ESVEWLE FL+ QN+PM+IVSHDREFLD+VCT IVD +GG Y GNYSRFLKLK +RMD+W AAY Q+KKIKDER WINKFK K AA K R+ LEKL+ASD+Y+K+PP +GKPF+FRFP APR EV + ++H Y NG LFED D+ V KG+RIA +GPNG+GKST+LR ++G E P G+ + G NVV YFEQNQADVLDL KTVI+T+ ST + Y ++R LLGQFLF+GD+VEK V LSGGEKAR++LC MM+ PANLL+LDEPTNHLDI AKEMLEEALQH+ G+V+V+SHDRYF+S+VATTI +ED LV+Y GDYRF++ER + + EK+E+RY AG I+ A ++DLE A + + FGG G RK+KG+KNAKR
Sbjct: 172 TLEEKIRKERPPPRIRVMESAQPGYSNLRLEHVGIVFREQEVLKDVTWGVQTGDRIGLVGQNGAGKTTQLRIMAGELQPTTGDVVKSSQDLRVAMLRQEFVDELVLDRTLNEEFMSVFVEELQLLEDIKQAESDLENLDPEADMDNMQNVLDRMQELQAKAEDKGVYALKATTRKVMDLMGFT-----EDEGEDLVRSFSGGWKMRIGLGKVLLKEPNILLLDEPTNHLDLESVEWLEEFLRQQNIPMIIVSHDREFLDQVCTKIVDAEGGACTEYDGNYSRFLKLKKSRMDAWNAAYNTQEKKIKDERRWINKFKIKQPQAA--KQRKAKLEKLVASDEYIKKPPFLGKPFKFRFPDAPRISP--EVAEVKHVTHAYRNGEVENKLFEDCDLFVEKGDRIAVVGPNGSGKSTMLRFLIGNEKPDEGSAAIIGQNVVANYFEQNQADVLDLDKTVIQTVQSESTDQSYNEMRALLGQFLFKGDSVEKKVRFLSGGEKARLSLCCMMMKPANLLILDEPTNHLDISAKEMLEEALQHFAGAVIVISHDRYFISKVATTIVAIEDRKLVKYQGDYRFYMERSEKVKEKIEARYFAGGAKIESAPKIDLEAAAAKARNNFGGAKTAGLVQRKNKGIKNAKR 800
BLAST of mRNA_H-paniculata_contig2075.5389.1 vs. uniprot
Match: A0A448Z8Y9_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z8Y9_9STRA) HSP 1 Score: 742 bits (1916), Expect = 4.040e-250 Identity = 384/642 (59.81%), Postives = 490/642 (76.32%), Query Frame = 3
Query: 876 TLEDKIRKSRPPPRVRISTSAQPGFVSLRLDGVAVTFRNQEVVKDASWEVKTGDRLGLVGPNGGGKTTQVKILAGELEPTAGELVKSSKDLRVSFLRQEFVDELVMERSLKDELVSVFVDEAKILSELQACEDKLQEDAVQQDPTAMEDVLNRLAKLQDEAERNHVYDLGTKVQRIMDVMGFSIRQGRANEGEQPVSSFSGGWRMRIGLGKILLTDPNILLLDEPTNHLDMESVEWLESFLQNQNLPMVIVSHDREFLDRVCTGIVDTDGGIAVSYPGNYSRFLKLKSARMDSWQAAYRNQQKKIKDERAWINKFKTKGSWAAQVKSRQKALEKLLASDDYVKQPPNMGKPFRFRFPPAPRAGSGEEVLLTQGLSHGYNGRY----LFEDVDMNVGKGERIAFLGPNGAGKSTLLRLIVGQENPTSGTCTL-GSNVVKQYFEQNQADVLDLSKTVIETMMGASTTEKYEDLRKLLGQFLFRGDAVEKSVEQLSGGEKARVALCKMMLTPANLLVLDEPTNHLDIPAKEMLEEALQHYEGSVLVVSHDRYFVSQVATTICNLEDGNLVRYDGDYRFFLERHDNLLEKVESRYVAGVDGIKKAKRVDLEELAR-QKKTFGGK--GGPSGRKDKGVKNAKRHAEQ 2777
TLEDKIRK RPPPR+R+ AQPGFVSLR++ + +TFRNQEV+KD +W V++G+R+GLVG NG GKTTQ++I+AGELEPT G++VKSS DLR + LRQEFVDELV ER+LK+E +SVF +E +I+ +L+ E++L E DP M+++L+R+ LQ +AE VY L +KV++ MD+MGF+ +E + V+SFSGGW+MRIGLGK+LL DPN+LLLDEPTNHLD+ESVEWLE+FL+ Q++PM+IVSHDREFLD+VCT IVD +GGI Y GNYSRFL+LK ARMDSWQ+AY Q+KKIK ER WINKF+ K VK R+ LEK + SD+YV++PP GKPFRFRFPPAPR EV +SH Y LF+ VD+++ KG+RIA +GPNG+GKST LRL++G+E G+ + G NV YFEQNQAD LDL KTVI+ + GAS + Y +LR LLGQFLF+GD VEK VE LSGGEKAR++LC MML ANLL+LDEPTNHLDIPAKEMLEEALQH++GS++VVSHDRYF+S+VATTI +ED L +Y GDY+F++E+ + EK+E+RYV G+D I A ++LEEL + +KK FGG RK+KGVKNAKR ++
Sbjct: 222 TLEDKIRKERPPPRIRVMEGAQPGFVSLRMEDIGITFRNQEVLKDVTWGVQSGERIGLVGKNGAGKTTQLRIMAGELEPTTGDVVKSSGDLRTAMLRQEFVDELVKERTLKEEFMSVFAEENQIVQDLKDAENRL-ETMSDADPEEMQEILDRMQDLQQKAEDKDVYVLESKVKKTMDLMGFND-----DEADDLVASFSGGWKMRIGLGKVLLKDPNVLLLDEPTNHLDLESVEWLEAFLREQSIPMIIVSHDREFLDQVCTKIVDAEGGICTEYDGNYSRFLQLKKARMDSWQSAYDAQEKKIKSERQWINKFQAKQPQV--VKQRKDKLEKFMKSDEYVQKPPFTGKPFRFRFPPAPRLSP--EVAQVDEMSHSYENEISNNRLFDKVDLSIEKGDRIAVVGPNGSGKSTFLRLLIGREEADEGSAQIVGQNVEMAYFEQNQADALDLDKTVIQVIQGASNGQSYNELRALLGQFLFKGDDVEKKVEFLSGGEKARLSLCCMMLRSANLLILDEPTNHLDIPAKEMLEEALQHFDGSIMVVSHDRYFISKVATTIVAIEDKKLTKYQGDYKFYMEKSKAIREKIEARYVKGLDRIGSAPEINLEELIKPKKKNFGGAKTANQVTRKNKGVKNAKRQQQR 853
BLAST of mRNA_H-paniculata_contig2075.5389.1 vs. uniprot
Match: A0A7R9UFD2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFD2_9STRA) HSP 1 Score: 735 bits (1898), Expect = 2.260e-249 Identity = 384/643 (59.72%), Postives = 492/643 (76.52%), Query Frame = 3
Query: 861 VQEEETLEDKIRKSRPPPRVRISTSAQPGFVSLRLDGVAVTFRNQEVVKDASWEVKTGDRLGLVGPNGGGKTTQVKILAGELEPTAGELVKSSKDLRVSFLRQEFVDELVMERSLKDELVSVFVDEAKILSELQACEDKLQEDAVQQDPTAMEDVLNRLAKLQDEAERNHVYDLGTKVQRIMDVMGFSIRQGRANEGEQPVSSFSGGWRMRIGLGKILLTDPNILLLDEPTNHLDMESVEWLESFLQNQNLPMVIVSHDREFLDRVCTGIVDTDGGIAVSYPGNYSRFLKLKSARMDSWQAAYRNQQKKIKDERAWINKFKTKGSWAAQVKSRQKALEKLLASDDYVKQPPNMGKPFRFRFPPAPRAGSGEEVLLTQGLSHGYNGRYLFEDVDMNVGKGERIAFLGPNGAGKSTLLRLIVGQENPTSGTCTLGS-NVVKQYFEQNQADVLDLSKTVIETMMGASTTE-KYEDLRKLLGQFLFRGDAVEKSVEQLSGGEKARVALCKMMLTPANLLVLDEPTNHLDIPAKEMLEEALQHYEGSVLVVSHDRYFVSQVATTICNLEDGNLVRYDGDYRFFLERHDNLLEKVESRYVAGVDGIKKAKRVDL-----EELARQKKTFGGKG-GPSGRKDKGVKNAKR 2765
V E ETLE++IRK+RPP RVRI+ SAQPG+VSLRL+ + + FRNQEV+KDA+W+VKTGDR+GLVGPNGGGKTTQ+KIL G++ PT GE+ KSSKDLRV+FL+QEF+D+LV++R+LK E +SVF E ++ EL ACE +L+ V DP M++VL + L KV +I++ +GF+ G A V SFSGGW+MRIGLGKILL DPN+LLLDEPTNHLDMESVEWLE FL+NQN+PMVIVSHDREFLDRVC IVD DGG +Y GNYSRFLKLK R+DSW+A+Y QQKKI+ E+ WIN+F+ GS AAQ KSR++ALEKLLASD+YV++PP G+ FRFP PR +E+ + + +SHGYNG LFEDV++ + G++IA +GPNGAGKSTL RL++G+E P GT + + N V YFEQNQAD LDL +TV++ +M +T E YE +R LLGQFLF+GD+VEK + LSGGEKARVALCK ML PAN+LVLDEPTNHLDIPAKE+LEEALQ + G+V ++SHDRYF+S+VAT IC +E+ LV Y GDYR ++E++D+L +K+ESRY+ G I+ ++V++ ++ ++KK FGG+ G SGRK+KGVKNAKR
Sbjct: 87 VAEPETLEEQIRKTRPPSRVRITESAQPGYVSLRLEKIGIVFRNQEVIKDATWDVKTGDRVGLVGPNGGGKTTQLKILNGDIVPTTGEVTKSSKDLRVAFLKQEFIDDLVLDRTLKMEFMSVFEKELRVQEELDACEKELE--TVVDDPEKMQEVLXXXXXXXXXXXXXXIDALEAKVDKILNTVGFTKADGGAL-----VKSFSGGWKMRIGLGKILLGDPNLLLLDEPTNHLDMESVEWLEDFLRNQNIPMVIVSHDREFLDRVCNRIVDCDGGTTYAYEGNYSRFLKLKKQRLDSWKASYDAQQKKIRAEKDWINRFRA-GSNAAQAKSRERALEKLLASDEYVERPPAQGRKLNFRFPTPPRCS--DEIAVLEDVSHGYNGTMLFEDVNIIIDNGDKIAIVGPNGAGKSTLARLLLGREAPLKGTAGITAHNAVVNYFEQNQADALDLDQTVLDAVMEDATAEHSYETVRALLGQFLFKGDSVEKKISNLSGGEKARVALCKFMLKPANVLVLDEPTNHLDIPAKEVLEEALQLFPGTVFMISHDRYFISKVATGICAIENKELVPYPGDYRSYMEQNDDLKDKIESRYITGDRRIEPVEKVEVIVEDDAQMKKKKKNFGGRAPGVSGRKEKGVKNAKR 719 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2075.5389.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2075.5389.1 >prot_H-paniculata_contig2075.5389.1 ID=prot_H-paniculata_contig2075.5389.1|Name=mRNA_H-paniculata_contig2075.5389.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=917bp MMVRRVLFLPAAAASLSSTSGFVISSLPASLTLRERAPRLTLTSSFKHDLback to top mRNA from alignment at H-paniculata_contig2075:894..9968- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2075.5389.1 ID=mRNA_H-paniculata_contig2075.5389.1|Name=mRNA_H-paniculata_contig2075.5389.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9075bp|location=Sequence derived from alignment at H-paniculata_contig2075:894..9968- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2075:894..9968- >mRNA_H-paniculata_contig2075.5389.1 ID=mRNA_H-paniculata_contig2075.5389.1|Name=mRNA_H-paniculata_contig2075.5389.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5502bp|location=Sequence derived from alignment at H-paniculata_contig2075:894..9968- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |