mRNA_H-paniculata_contig20727.5382.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig20727.5382.1 vs. uniprot
Match: A0A6H5JCU7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCU7_9PHAE) HSP 1 Score: 155 bits (392), Expect = 6.410e-42 Identity = 90/171 (52.63%), Postives = 114/171 (66.67%), Query Frame = 2
Query: 446 GREKRCHTHAWTRRQEK-------AVLTHMHIDEVLSALPNFTNEKPAMQHF-ESCGHMLLLLPKFHAEVAGVGIEYSWGMSKWKFRREVNDEVSKRLYRNMVVSVCTEQILTVQRVRRFARRTRDYGRAYLELQ-RGDDIESKDMIEKMKKCKSDH-NILDMEPGFIDTQ 928
G+ K + W R K V MH+++VL ALP+F NE+ A+QH ES GH+LL PK H EVAGVGIEYSWG SK KFRR+++DEV K L+ N+ S+C ++ LT+ RVRRFARRTRDY RAY E+ RG I +K+ IEKM+K + H NILDME F+ Q
Sbjct: 40 GKAKGVRQYLWERGWWKDGMSTGAGVRDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKPKFRRKIDDEVPKHLHDNIEKSLCIDKYLTIGRVRRFARRTRDYCRAYREIALRGVVIRNKEFIEKMRKIQKAHRNILDMETSFLGDQ 210
BLAST of mRNA_H-paniculata_contig20727.5382.1 vs. uniprot
Match: A0A6H5JVH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVH4_9PHAE) HSP 1 Score: 155 bits (393), Expect = 3.520e-40 Identity = 90/171 (52.63%), Postives = 113/171 (66.08%), Query Frame = 2
Query: 446 GREKRCHTHAWTRRQEK-------AVLTHMHIDEVLSALPNFTNEKPAMQHF-ESCGHMLLLLPKFHAEVAGVGIEYSWGMSKWKFRREVNDEVSKRLYRNMVVSVCTEQILTVQRVRRFARRTRDYGRAYLELQ-RGDDIESKDMIEKMKKCKSDH-NILDMEPGFIDTQ 928
G+ K + W R K V MH+++VL ALP+F NE+ A+QH ES GH+LL PK H EVAGVGIEYSWG SK KFRR++NDEV K L+ N+ S+C + LT+ RVRRFARRTRDY RAY E+ RG I +K+ IEKM+K + H N+LDME F+ Q
Sbjct: 210 GKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHDNIEESLCIHKYLTIGRVRRFARRTRDYCRAYREIALRGVVIRNKEFIEKMRKIQKAHRNMLDMETSFLGFQ 380
BLAST of mRNA_H-paniculata_contig20727.5382.1 vs. uniprot
Match: A0A6H5KQB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB9_9PHAE) HSP 1 Score: 157 bits (398), Expect = 1.770e-39 Identity = 91/171 (53.22%), Postives = 113/171 (66.08%), Query Frame = 2
Query: 446 GREKRCHTHAWTRRQEK-------AVLTHMHIDEVLSALPNFTNEKPAMQHF-ESCGHMLLLLPKFHAEVAGVGIEYSWGMSKWKFRREVNDEVSKRLYRNMVVSVCTEQILTVQRVRRFARRTRDYGRAYLELQ-RGDDIESKDMIEKMKKCKSDH-NILDMEPGFIDTQ 928
G+ K + W R K V MH+++VL ALP+F NE+ A+QH ES GH+LL PK H EVAGVGIEYSWG SK KFRR +NDEV K L+ N+ S+C ++ LT+ RVRRFARRTRDY RAY E+ RG I +K+ IEKM+K + H NILDME F+ Q
Sbjct: 405 GKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRRINDEVPKHLHDNIEKSLCIDKYLTIGRVRRFARRTRDYCRAYREIALRGVVIRNKEFIEKMRKIQKAHRNILDMETSFLGDQ 575
BLAST of mRNA_H-paniculata_contig20727.5382.1 vs. uniprot
Match: A0A6H5L885_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L885_9PHAE) HSP 1 Score: 158 bits (399), Expect = 5.740e-39 Identity = 87/151 (57.62%), Postives = 109/151 (72.19%), Query Frame = 2
Query: 485 RQEKAVLTHMHIDEVLSALPNFTNEKPAMQHF-ESCGHMLLLLPKFHAEVAGVGIEYSWGMSKWKFRREVNDEVSKRLYRNMVVSVCTEQILTVQRVRRFARRTRDYGRAYLELQ-RGDDIESKDMIEKMKKCKSDH-NILDMEPGFIDTQ 928
R+ V MH+++VL ALP+F NE+ A+QH ES GH+LL PK H EVAGVGIEYSWG SK KFRR++NDEV K L+ N+ S+C ++ LT+ RVRRFARRTRDY RAY E+ RG I +K+ IEKM+K + H NILDME F+ Q
Sbjct: 608 RKGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHGNIEKSLCIDKYLTIGRVRRFARRTRDYCRAYREIALRGVVIRNKEFIEKMRKIQKAHRNILDMETSFLGDQ 758
BLAST of mRNA_H-paniculata_contig20727.5382.1 vs. uniprot
Match: A0A6H5L611_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L611_9PHAE) HSP 1 Score: 158 bits (399), Expect = 9.470e-39 Identity = 91/171 (53.22%), Postives = 114/171 (66.67%), Query Frame = 2
Query: 446 GREKRCHTHAWTRRQEK-------AVLTHMHIDEVLSALPNFTNEKPAMQHF-ESCGHMLLLLPKFHAEVAGVGIEYSWGMSKWKFRREVNDEVSKRLYRNMVVSVCTEQILTVQRVRRFARRTRDYGRAYLELQ-RGDDIESKDMIEKMKKCKSDH-NILDMEPGFIDTQ 928
G+ K + W R K V MH+++VL ALP+F NE+ A+QH ES GH+LL PK H EVAGVGIEYSWG SK KFRR++NDEV K L+ N+ S+C ++ LT+ RVRRFARRTRDY RAY E+ RG I +K+ IEKM+K + H NILDME F+ Q
Sbjct: 819 GKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHDNIEKSLCIDKYLTIGRVRRFARRTRDYCRAYREIALRGVVIRNKEFIEKMRKIQKAHRNILDMETSFLGDQ 989
BLAST of mRNA_H-paniculata_contig20727.5382.1 vs. uniprot
Match: A0A6H5K769_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K769_9PHAE) HSP 1 Score: 147 bits (371), Expect = 5.730e-37 Identity = 85/171 (49.71%), Postives = 112/171 (65.50%), Query Frame = 2
Query: 446 GREKRCHTHAWTRRQEK-------AVLTHMHIDEVLSALPNFTNEKPAMQHF-ESCGHMLLLLPKFHAEVAGVGIEYSWGMSKWKFRREVNDEVSKRLYRNMVVSVCTEQILTVQRVRRFARRTRDYGRAYLELQRGD-DIESKDMIEKMKKCKSDH-NILDMEPGFIDTQ 928
G+ K + W R K + ++++VL AL +F +E+ A+Q+ ES GH+LLL PK H EVAGVGIEYSWG SK +FRR+ NDEV K L+ N+ S+C E+ LT+ RVRRFARRTRDY RAY E+Q G D + ++EKM+ + H NILDMEPGF+ Q
Sbjct: 214 GKAKGSKQYLWERGWWKEGMNASVGIADEKNVEKVLQALTDFESERTALQYLVESRGHILLLSPKCHPEVAGVGIEYSWGFSKQRFRRKYNDEVPKHLHANIEKSMCREKHLTIGRVRRFARRTRDYCRAYREIQLGAADGQGLQLVEKMRNTQKAHRNILDMEPGFLGKQ 384
BLAST of mRNA_H-paniculata_contig20727.5382.1 vs. uniprot
Match: A0A6H5K836_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K836_9PHAE) HSP 1 Score: 133 bits (334), Expect = 3.530e-34 Identity = 74/129 (57.36%), Postives = 94/129 (72.87%), Query Frame = 2
Query: 551 TNEKPAMQHF-ESCGHMLLLLPKFHAEVAGVGIEYSWGMSKWKFRREVNDEVSKRLYRNMVVSVCTEQILTVQRVRRFARRTRDYGRAYLELQ-RGDDIESKDMIEKMKKCKSDH-NILDMEPGFIDTQ 928
++E+ +QH E GH+LLL PK H EVAGVG +YSWG+SK KFRR++NDEV K L+ N+ S+CT++ LTV RVRRFARRTRD+ RAY ++ G I SKD IEKM+K + H NILDME F+ Q
Sbjct: 20 SSERTVLQHLVERRGHILLLAPKCHPEVAGVGTKYSWGLSKQKFRRKINDEVPKHLHANIEKSLCTDKYLTVGRVRRFARRTRDHCRAYRDIALSGGFIMSKDFIEKMRKNQKAHRNILDMETSFLGDQ 148
BLAST of mRNA_H-paniculata_contig20727.5382.1 vs. uniprot
Match: A0A6H5KXL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXL0_9PHAE) HSP 1 Score: 141 bits (355), Expect = 2.750e-33 Identity = 82/151 (54.30%), Postives = 104/151 (68.87%), Query Frame = 2
Query: 485 RQEKAVLTHMHIDEVLSALPNFTNEKPAMQHF-ESCGHMLLLLPKFHAEVAGVGIEYSWGMSKWKFRREVNDEVSKRLYRNMVVSVCTEQILTVQRVRRFARRTRDYGRAYLELQ-RGDDIESKDMIEKMKKCKSDH-NILDMEPGFIDTQ 928
R+ V MH+++VL ALP+F E+ A++H ES GH + L K H EVAGVGIEYSWG SK KFRR++NDEV K L+ N+ S+C ++ LT+ RVRRFARRTRDY RAY E+ G I S + IEKM+K + H NILDME F+ Q
Sbjct: 495 RKGAGVSDDMHVEKVLHALPDFKIERTALEHLVESRGH--IHLSKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHDNIEKSLCIDKYLTIGRVRRFARRTRDYCRAYREIALSGVVIRSNEFIEKMRKIQKAHRNILDMETSFLGDQ 643
BLAST of mRNA_H-paniculata_contig20727.5382.1 vs. uniprot
Match: A0A6H5JVN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN6_9PHAE) HSP 1 Score: 139 bits (350), Expect = 2.590e-32 Identity = 84/171 (49.12%), Postives = 111/171 (64.91%), Query Frame = 2
Query: 446 GREKRCHTHAWTRRQEK-------AVLTHMHIDEVLSALPNFTNEKPAMQHF-ESCGHMLLLLPKFHAEVAGVGIEYSWGMSKWKFRREVNDEVSKRLYRNMVVSVCTEQILTVQRVRRFARRTRDYGRAYLELQRGD-DIESKDMIEKMKKCKSDH-NILDMEPGFIDTQ 928
G+ K + W R K + ++++VL AL +F +E+ A+Q+ ES GH+LLL PK H EVAGVGIEYSWG SK +FRR+ NDEV K L+ N+ S+ E+ LT+ RVRRFARRTRDY RAY E+Q G D + ++EKM+ + H NILDMEPGF+ Q
Sbjct: 810 GKAKGSKQYLWERGWWKEGMNASVGIADEKNVEKVLQALTDFESERTALQYLVESRGHILLLSPKCHPEVAGVGIEYSWGFSKQRFRRKYNDEVPKHLHANIEKSM--EKHLTIGRVRRFARRTRDYCRAYREIQLGAADGQGLQLVEKMRNTQKAHRNILDMEPGFLGKQ 978
BLAST of mRNA_H-paniculata_contig20727.5382.1 vs. uniprot
Match: A0A6H5K7P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7P7_9PHAE) HSP 1 Score: 139 bits (349), Expect = 3.590e-32 Identity = 83/171 (48.54%), Postives = 106/171 (61.99%), Query Frame = 2
Query: 446 GREKRCHTHAWTR-------RQEKAVLTHMHIDEVLSALPNFTNEKPAMQHF-ESCGHMLLLLPKFHAEVAGVGIEYSWGMSKWKFRREVNDEVSKRLYRNMVVSVCTEQILTVQRVRRFARRTRDYGRAYLELQRGD-DIESKDMIEKMKKCKSDH-NILDMEPGFIDTQ 928
G+ K + W R + +I++VL AL NF +E+ +Q ES GH+LLL PK H EVAGVGIEYSWG SK +FRR+ NDEV K L+ N+ S+C E+ L + RVRRFARRTRDY RAY E Q G D + ++EKM+ + H NIL MEPGF+ Q
Sbjct: 864 GKAKGSKQYLWERGWWIEGMNASVGIADEKNIEKVLQALTNFESERTELQCLVESRGHILLLSPKCHPEVAGVGIEYSWGFSKQRFRRKYNDEVPKHLHANIEKSMCREKHLMIGRVRRFARRTRDYCRAYRETQLGAVDGQGLQLVEKMRDTQKAHRNILKMEPGFLGKQ 1034 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20727.5382.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig20727.5382.1 >prot_H-paniculata_contig20727.5382.1 ID=prot_H-paniculata_contig20727.5382.1|Name=mRNA_H-paniculata_contig20727.5382.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=307bp MSRSRHGSKLAWYRAMVEDLCPDGLFRSAEGEVEFETELHAEYKKDDTGKback to top mRNA from alignment at H-paniculata_contig20727:117..1547- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig20727.5382.1 ID=mRNA_H-paniculata_contig20727.5382.1|Name=mRNA_H-paniculata_contig20727.5382.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1431bp|location=Sequence derived from alignment at H-paniculata_contig20727:117..1547- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig20727:117..1547- >mRNA_H-paniculata_contig20727.5382.1 ID=mRNA_H-paniculata_contig20727.5382.1|Name=mRNA_H-paniculata_contig20727.5382.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1842bp|location=Sequence derived from alignment at H-paniculata_contig20727:117..1547- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |