mRNA_H-paniculata_contig20665.5365.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig20665.5365.1
Unique NamemRNA_H-paniculata_contig20665.5365.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig20665.5365.1 vs. uniprot
Match: A0A6H5JV48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV48_9PHAE)

HSP 1 Score: 241 bits (616), Expect = 5.160e-70
Identity = 188/519 (36.22%), Postives = 247/519 (47.59%), Query Frame = 1
Query:    1 TRLNLPERVAIPQLGRLRELMFREACLLDSLDHECVVRLECAWLEQRVCETPRGLGD----SLSDRQGATAGKNNPVIPTAKRR---DEGSGGFAQKACW-------LLQSVEQSAPNS---SASNTQHRCRSRSLTNSC--------PSIC-------DEDPVAA--LRPFVPWTVEEQEADSDFSDTEEGKQGMPISG---------RRGNIERQPCWGGDQSTRWMGAAEPKGPTTKRACPTAGSTC----VGQRVGSSLRERSVAMGRTESVVCRQEDDRVDANIRTGDDCLCLIASPKMISVAAYLLMPDGKTLGEWLETEFEPRIAPDE----QGVAMAVTTAGDWARVWGKLLHMFLQVVRGVEYLHVQGIVHNGISTDSVWVGADGVCRIGSVGHATPPGRRRPPTEAGPLQHFFSPERRRGDRVDSHSDVFSLGILLRELWCAYLRARGFGR------NSVDEVVTSKWVELGRPVDASDLLDFELVKQMLANDPFDRPDCFELIHSLGG 1386
            TR  L ER+A+PQLGRLRELM REA LLD+L H+ VV LE  WLE+R      GL      + S R+    G N   +  A+     +  +    Q  CW       +L+      P+S   + + T    +  ++   C        P          DE+  AA  L   VP T++    D D  D   G     I           + G +E Q  WGGD +T W G AEPK P+  +     G T      GQ    SL   + A G      C  E          G   +      + + + +YLL+PD   L  W +TEFEP+ A  E       A AVT   DWA VW  L+ MF  V+RGVE++H +G+VHN I   S+WV ADG C +G++   TPPG R+   E     H+ SPERRRGD VDSHSDV++LG+L+ + W  Y+ +RG G         + E V S       P + +DLLD  LV  MLA DPFDRPDCFE+   LGG
Sbjct:   67 TRFVLSERLAVPQLGRLRELMIREARLLDTLSHDYVVPLEQGWLEERA-----GLEQFHVCARSMRKSQVEGANYTSVSAAQDPIGIERVAHNTRQHRCWGDAASTAVLEECSLRQPHSMGAAMAKTGSAAQGSTVCCGCFRREAGFPPYYAKRDKYSRDEENAAAFLLHSRVPLTLD----DIDCEDGGMGGMSHSIKSIDDASTAPPQHGGLE-QLRWGGDGTTGWKGTAEPK-PSADKTTSCTGCTSSPLPTGQPRPMSLNSAAAASGGYYCGCCGSET----RGTGHGGREIVRRQRERTLCLTSYLLLPDWLPLSVWFDTEFEPQTAAPEGQDGAATARAVTAPHDWALVWRHLMSMFEGVLRGVEHVHTKGLVHNNIHPCSLWVAADGRCCVGNLSQVTPPGCRKGAPEH---HHYASPERRRGDVVDSHSDVYALGVLMLDFWRHYILSRGLGEVCLTGEGGLVERVKSGEGRAPHPEEGADLLDCVLVGSMLAEDPFDRPDCFEIEDRLGG 567          
BLAST of mRNA_H-paniculata_contig20665.5365.1 vs. uniprot
Match: D7G871_ECTSI (PK_Tyr_Ser-Thr domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G871_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 1.140e-45
Identity = 164/494 (33.20%), Postives = 212/494 (42.91%), Query Frame = 1
Query:   61 MFREACLLDSLDHECVVRLECAWLEQRVCETPRGLGD----SLSDRQGATAGKNNPVIPTAK------------RRDEGSGGFAQKA----CWLLQSVEQSAP---NSSASNTQHRCRS--RSLTNSCPSIC-------DEDPVAA--LRPFVPWTVEEQEADSDFSDTEEGKQG-MPISGR-----------RGNIERQPCWGGDQSTRWMGAAEPKGPTTKRACPTAGSTCVGQRVGSSLRERSVAMGRTESVVCRQEDDRVDANIRTGDDCLCLIASPKMISVAAYLLMPDGKTLGEWLETEFEPRIAPDEQGVAMAVTTAGDWARVWGKLLHMFLQVVRGVEYLHVQGIVHNGISTDSVWVGADGVCRIGSVGHATPPGRRRPPTEAGPLQHFFSPERRRGDRVDSHSDVFSLGILLRELWCAYLRARGF------GRNSVDEVVTSKWVELGRPVDASDLLDFELVKQMLANDPFDRPDCFELIHSLGG 1386
            M REA LLD+L H+ VV LE  WLE+R      GL      + S R+    G N   +  A+            R+    G  A  A    C L Q   + A     +SA+     C    R+     P          DE+  AA  L   VP T+       D  D E+G  G M  S +            G +E Q  WGGD +T W G AEPK P+T       G T                                 + + T        A P+ IS+ +     +G+                D      AVT   DWA VW  L+ MF  V+RGVE+LH +G+VHN I   S+WV ADG C +G++   TPPG R+   E     HF SPERRRGD VDSHSDV++LG+L+ E W  Y+ +RG       G   + E V S   +   P + + LLD  LV  MLA DPF+RPDCFE+   LGG
Sbjct:    1 MIREARLLDTLSHDYVVPLEQGWLEERA-----GLEQFHVHTRSMRKSQVEGANYASVSAAQDAIGIERVAHSTRQHRCLGNAATTAVLDECSLRQPHSRDAAIATTASAAQGSMACCGCFRTEAGFPPYYAKRDRYSGDEEHAAAFLLHSRVPLTL-------DDIDCEDGGMGEMSHSNKSIDDASTAPPQHGGLE-QLRWGGDGTTGWKGTAEPK-PSTDETTSCTGCT--------------------------------SSPLPT--------AQPRPISLNSAAAASEGQ----------------DGATTTRAVTAPHDWALVWRHLMSMFKGVLRGVEHLHTKGLVHNNIHPCSLWVAADGRCCVGNLSQVTPPGCRKGAPEH---HHFASPERRRGDVVDSHSDVYALGVLMLEFWRHYILSRGLSEVCLTGEGGLVERVKSGEEKTPHPEEGAGLLDCTLVGSMLAEDPFERPDCFEIEDRLGG 421          
BLAST of mRNA_H-paniculata_contig20665.5365.1 vs. uniprot
Match: UPI001F07F11E (interferon-induced, double-stranded RNA-activated protein kinase-like isoform X1 n=4 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F07F11E)

HSP 1 Score: 72.0 bits (175), Expect = 7.460e-10
Identity = 48/159 (30.19%), Postives = 79/159 (49.69%), Query Frame = 1
Query:  925 LHMFLQVVRGVEYLHVQGIVHNGISTDSVWVGADGVCRIGSVGHATPPGRRRPPTEAG-PLQHFFSPERRRGDRVDSHSDVFSLGILLRE-LWCAYLRARGFGRNSVDEVVTSKWVELGRPVDASDL-----LDFELVKQMLANDPFDRPDCFELIHSL 1380
            LHMF Q+V GVEY+H +G +H  +  ++V++G D   +IG  GH T         + G P+  + SPE++     D  +D+F+LG++  E LW              D   +  + +L R V   D       +  ++++ML+N P +RPD  E+   L
Sbjct:  313 LHMFRQIVSGVEYIHSKGHIHRDLKPENVFIGEDETLKIGDFGHVTNSSPVSRTLDKGTPI--YMSPEQKTDTDYDDKTDIFALGLICFEILW----------EMPTDSEKSKLFEDLRRQVFPEDFKNKYATEHRIIRKMLSNTPAERPDVEEIAKYL 459          
BLAST of mRNA_H-paniculata_contig20665.5365.1 vs. uniprot
Match: A0A418AKU4_9STRA (Protein kinase domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AKU4_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 1.700e-8
Identity = 48/149 (32.21%), Postives = 74/149 (49.66%), Query Frame = 1
Query:  925 LHMFLQVVRGVEYLHVQGIVHNGISTDSVWVGADGVCRIGSVGHATPPGRRRPPTEAGPLQHFFSPERRRGDRVDSHSDVFSLGILLRELWCAYLRARGFGRNSVDEVVTSKWVELGRPVDASDLLDFE-LVKQMLANDPFDRPDCFEL 1368
            L +F Q+V G++Y+H QG++H  I   ++ +  D   +IG  G AT  GR            + SPE+ RGD   + SDVFSLG++L EL+C       F       V   +  +    V A   ++   +VKQ++  DP  RP C ++
Sbjct:  216 LTIFRQIVAGLKYIHGQGLIHRDIKPANILLTQDACVKIGDFGLATD-GRIEASAAGVGTPLYSSPEQTRGDMCSTKSDVFSLGLVLCELFC------NFSTQMEKHVTLMQVRDPDGAVPACVPVEIAAVVKQLVHPDPARRPSCADI 357          
BLAST of mRNA_H-paniculata_contig20665.5365.1 vs. uniprot
Match: UPI001F085C36 (interferon-induced, double-stranded RNA-activated protein kinase-like isoform X1 n=3 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F085C36)

HSP 1 Score: 67.4 bits (163), Expect = 2.380e-8
Identity = 65/240 (27.08%), Postives = 108/240 (45.00%), Query Frame = 1
Query:  697 QEDDRVDAN--IRTGDDCLCLIASPKMISVAAYLLMPDGKTLGEWLETEFEPRIAPDEQGVAMAVTTAGDWARVWGKLLHMFLQVVRGVEYLHVQGIVHNGISTDSVWVGADGVCRIGSVGHAT----PPGRRRPPTEAGPLQHFFSPERRRGDRVDSHSDVFSLGILLRE-LWCAYLRARGFGRNSVDEVVTSKWVELGRPVDASDLL-----DFELVKQMLANDPFDRPDCFELIHSL 1380
            Q+D    AN   ++G D  CL    +           +  TL +W++   E        G    + TA        + LHMF Q+V GVEY+H +G +H  +  +++++G D   +IG  GH T     P RR   +E G L  + SPE++     D  +D+++LG++  E LW            +V E +   + +L R V   D       +  ++++ML  +P +RPD  E+   L
Sbjct:  284 QKDSCSSANGAEKSGRDLSCLFIKMEFC---------EKGTLNDWIKKRNE--------GTKNKLKTA--------EALHMFRQIVSGVEYIHSKGHIHRDLKPENMFIGEDETLKIGDFGHVTIASSSPVRRT--SETGTLI-YMSPEQKTETVYDKKTDIYALGLICFEILW---------KMPTVSEKL-KLFEDLHRQVFPGDFKNKYSPEHRIIRKMLFKNPAERPDVEEIAKEL 485          
BLAST of mRNA_H-paniculata_contig20665.5365.1 vs. uniprot
Match: A0A6A5AT89_9STRA (Protein kinase domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AT89_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 6.280e-8
Identity = 52/150 (34.67%), Postives = 79/150 (52.67%), Query Frame = 1
Query:  925 LHMFLQVVRGVEYLHVQGIVHNGISTDSVWVGADGVCRIGSVGHATPPGRRRPPTEAG---PLQHFFSPERRRGDRVDSHSDVFSLGILLRELWCAYLRARGFGRNSVDEVVTSKWVELGRPVDASDLLD--FELVKQMLANDPFDRPDC 1359
            L +F Q+V G++Y+H QG++H  I   ++++  D   +IG  G AT   R    + AG   PL  + SPE+ RGD   + SDVFSLG++L EL+C +          +++ VT   V     V  S +      +VKQ++  DP  RP C
Sbjct:  167 LTIFQQIVSGLKYIHGQGLIHRDIKPANIFLTLDACVKIGDFGLATD-SRLLESSLAGVGTPL--YSSPEQTRGDVCSTKSDVFSLGLVLCELFCNF-------STQMEKHVTLMEVRSPHGVVPSCVPPEIAAVVKQLVHPDPSKRPTC 306          
BLAST of mRNA_H-paniculata_contig20665.5365.1 vs. uniprot
Match: A0A3R6YKI6_9STRA (Protein kinase domain-containing protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6YKI6_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 8.360e-8
Identity = 52/150 (34.67%), Postives = 79/150 (52.67%), Query Frame = 1
Query:  925 LHMFLQVVRGVEYLHVQGIVHNGISTDSVWVGADGVCRIGSVGHATPPGRRRPPTEAG---PLQHFFSPERRRGDRVDSHSDVFSLGILLRELWCAYLRARGFGRNSVDEVVTSKWVELGRPVDASDLLD--FELVKQMLANDPFDRPDC 1359
            L +F Q+V G++Y+H QG++H  I   ++++  D   +IG  G AT   R    + AG   PL  + SPE+ RGD   + SDVFSLG++L EL+C +          +++ VT   V     V  S +      +VKQ++  DP  RP C
Sbjct:  317 LTIFQQIVSGLKYIHGQGLIHRDIKPANIFLTLDACVKIGDFGLATD-SRLLESSLAGVGTPL--YSSPEQTRGDVCSTKSDVFSLGLVLCELFCNF-------STQMEKHVTLMEVRSPHGVVPSCVPPEIAAVVKQLVHPDPSKRPTC 456          
BLAST of mRNA_H-paniculata_contig20665.5365.1 vs. uniprot
Match: A0A6G0XH53_9STRA (Protein kinase domain-containing protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XH53_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 4.070e-7
Identity = 42/146 (28.77%), Postives = 72/146 (49.32%), Query Frame = 1
Query:  931 MFLQVVRGVEYLHVQGIVHNGISTDSVWVGADGVCRIGSVGHATPPGRRRPPTEAGPLQHFFSPERRRGDRVDSHSDVFSLGILLRELWCAYLRARGFGRNSVDEVVTSKWVELGRPVDASDLLDFELVKQMLANDPFDRPDCFEL 1368
            +F Q+V G++Y+H QG++H  I   ++++  D   +IG  G AT                + SPE+ RGD     +DVFSLG++L EL+C +       ++     +TS       P    D+    ++++++  DP  RP C E+
Sbjct:  272 IFRQIVAGLKYIHAQGLIHRDIKPANIFLTLDACVKIGDFGLATHMTHSSAAAAGIGTPLYSSPEQLRGDVCTPAADVFSLGLVLCELFCQF--DTQMEKHVTLTSLTSSTQRQLPPSVPQDIA--AIIRRLVHPDPVQRPSCPEI 413          
BLAST of mRNA_H-paniculata_contig20665.5365.1 vs. uniprot
Match: UPI0008708A82 (eukaryotic translation initiation factor 2-alpha kinase 3 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0008708A82)

HSP 1 Score: 62.4 bits (150), Expect = 1.350e-6
Identity = 59/235 (25.11%), Postives = 98/235 (41.70%), Query Frame = 1
Query:  742 CLCLIASPKMISVAAYLLMP--DGKTLGEWLETEFEPRIAPDEQGVAMAVTTAGDWARVWGKLLHMFLQVVRGVEYLHVQGIVHNGISTDSVWVG-ADGVCRIGSVGHATPPGRRRPP-----------------------TEAGPLQHFFSPERRRGDRVDSHSDVFSLGILLRELWCAYLRARGFGRNSVDEVVTSKWVELGRPVDASDLLDFELVKQMLANDPFDRPDCFEL 1368
            CL L  +P    V  Y+ M     ++L EWL      R   D +G                K+L +F Q+   VEY+H +G++H  +   +++   AD V ++G  G  T       P                       T+    Q + SPE+  G++ +   D+FSLG++  EL    L +       V+ +   K +   R    S  ++++LV+QM+A DP +RP   E+
Sbjct:  782 CLQLEEAPSTQPVYLYIQMQLCRKESLKEWLSH----RTTLDHRG--------------HDKILDIFFQISSAVEYVHDKGLIHRDLKPSNIFFATADDVIKVGDFGLVTGTDNNPTPGFTPAQANESLMSFDGNFNDLQLTDKVGTQLYMSPEQITGNKYNQKVDIFSLGLIFFEL----LWSLPTQMERVNTLTAIKQLHFPRAFKKSFPIEYQLVRQMVAADPTNRPSALEV 994          
BLAST of mRNA_H-paniculata_contig20665.5365.1 vs. uniprot
Match: A0A182XUY3_ANOST (Protein kinase domain-containing protein n=2 Tax=Anopheles stephensi TaxID=30069 RepID=A0A182XUY3_ANOST)

HSP 1 Score: 62.4 bits (150), Expect = 1.390e-6
Identity = 48/164 (29.27%), Postives = 81/164 (49.39%), Query Frame = 1
Query:  919 KLLHMFLQVVRGVEYLHVQGIVHNGISTDSVWVGADGVCRIGSVGHATPPGRRRPPTEAG-----PLQH--------FFSPERRRGDRVDSHSDVFSLGILLRELWCAYLRARGFGRNSVDEVVTSKWVELGRPVDASD---LLDFELVKQMLANDPFDRPDCF 1362
            K++ +F Q+V GVEY+H++G++H  +   +++   DG  RIG  G  T     +  +E       P +H        + SPE+ +G   D   D++SLG++L EL  +      FG   ++ + T K V   +  D  +     +F+L+K ML+  P  RP  F
Sbjct:  941 KIVPIFEQIVAGVEYVHLKGLIHRDLKPSNIFFSLDGRIRIGDFGLVTDSSDLQYDSENNMPTMVPDRHTRQVGTQLYMSPEQLKGLPYDYKVDIYSLGLILFELLVS------FG-TEMERICTLKNVRKSKFPDQFEEQYQCEFKLLKLMLSESPNQRPTTF 1097          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20665.5365.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JV48_9PHAE5.160e-7036.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G871_ECTSI1.140e-4533.20PK_Tyr_Ser-Thr domain-containing protein n=1 Tax=E... [more]
UPI001F07F11E7.460e-1030.19interferon-induced, double-stranded RNA-activated ... [more]
A0A418AKU4_9STRA1.700e-832.21Protein kinase domain-containing protein n=2 Tax=A... [more]
UPI001F085C362.380e-827.08interferon-induced, double-stranded RNA-activated ... [more]
A0A6A5AT89_9STRA6.280e-834.67Protein kinase domain-containing protein (Fragment... [more]
A0A3R6YKI6_9STRA8.360e-834.67Protein kinase domain-containing protein n=8 Tax=A... [more]
A0A6G0XH53_9STRA4.070e-728.77Protein kinase domain-containing protein n=2 Tax=A... [more]
UPI0008708A821.350e-625.11eukaryotic translation initiation factor 2-alpha k... [more]
A0A182XUY3_ANOST1.390e-629.27Protein kinase domain-containing protein n=2 Tax=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20665contigH-paniculata_contig20665:219..3459 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score71.2
Seed ortholog evalue1.4e-09
Seed eggNOG ortholog157072.XP_008871110.1
KEGG koko:K08860
KEGG Pathwayko04137,ko04140,ko04141,ko04210,ko04214,ko04932,ko05010,ko05160,ko05162,ko05164,ko05168,ko05169,map04137,map04140,map04141,map04210,map04214,map04932,map05010,map05160,map05162,map05164,map05168,map05169
Hectar predicted targeting categoryother localisation
EggNOG free text desc.eukaryotic translation initiation factor 2alpha kinase activity
EggNOG OGsCOG0124@1,KOG1035@2759
Ec32 ortholog descriptionProtein kinase-like domain
Ec32 orthologEc-12_001250.1
EC2.7.11.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Exons2
Model size1386
Cds size1386
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929539.244833-CDS-H-paniculata_contig20665:218..12321622929539.244833-CDS-H-paniculata_contig20665:218..1232Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20665 219..1232 +
1691480904.5367265-CDS-H-paniculata_contig20665:218..12321691480904.5367265-CDS-H-paniculata_contig20665:218..1232Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20665 219..1232 +
1622929539.255702-CDS-H-paniculata_contig20665:3087..34591622929539.255702-CDS-H-paniculata_contig20665:3087..3459Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20665 3088..3459 +
1691480904.5507066-CDS-H-paniculata_contig20665:3087..34591691480904.5507066-CDS-H-paniculata_contig20665:3087..3459Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20665 3088..3459 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20665.5365.1prot_H-paniculata_contig20665.5365.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig20665 219..3459 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig20665.5365.1

>prot_H-paniculata_contig20665.5365.1 ID=prot_H-paniculata_contig20665.5365.1|Name=mRNA_H-paniculata_contig20665.5365.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=462bp
TRLNLPERVAIPQLGRLRELMFREACLLDSLDHECVVRLECAWLEQRVCE
TPRGLGDSLSDRQGATAGKNNPVIPTAKRRDEGSGGFAQKACWLLQSVEQ
SAPNSSASNTQHRCRSRSLTNSCPSICDEDPVAALRPFVPWTVEEQEADS
DFSDTEEGKQGMPISGRRGNIERQPCWGGDQSTRWMGAAEPKGPTTKRAC
PTAGSTCVGQRVGSSLRERSVAMGRTESVVCRQEDDRVDANIRTGDDCLC
LIASPKMISVAAYLLMPDGKTLGEWLETEFEPRIAPDEQGVAMAVTTAGD
WARVWGKLLHMFLQVVRGVEYLHVQGIVHNGISTDSVWVGADGVCRIGSV
GHATPPGRRRPPTEAGPLQHFFSPERRRGDRVDSHSDVFSLGILLRELWC
AYLRARGFGRNSVDEVVTSKWVELGRPVDASDLLDFELVKQMLANDPFDR
PDCFELIHSLGG
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mRNA from alignment at H-paniculata_contig20665:219..3459+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig20665.5365.1 ID=mRNA_H-paniculata_contig20665.5365.1|Name=mRNA_H-paniculata_contig20665.5365.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3241bp|location=Sequence derived from alignment at H-paniculata_contig20665:219..3459+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACCAGGTTAAACTTGCCGGAGCGCGTCGCCATACCACAACTGGGGCGACT GAGAGAGCTAATGTTCCGCGAAGCCTGTCTTCTTGACTCTCTTGACCATG AGTGCGTGGTGCGTTTGGAGTGCGCGTGGCTTGAACAGCGCGTCTGTGAG ACGCCAAGGGGTCTCGGCGATTCGCTTTCAGATCGCCAAGGCGCGACCGC TGGAAAGAACAACCCAGTCATACCCACCGCGAAACGAAGGGACGAAGGGA GCGGCGGATTCGCTCAGAAGGCTTGCTGGTTGCTGCAGAGTGTGGAGCAG TCTGCACCCAACAGCAGTGCATCCAATACGCAACACCGATGTCGTTCGCG TTCTTTGACAAATTCATGCCCTTCAATATGTGACGAAGACCCCGTCGCTG CGCTCCGCCCCTTCGTGCCGTGGACTGTCGAAGAGCAAGAGGCCGACAGC GATTTCTCTGATACCGAAGAAGGCAAACAGGGCATGCCCATCAGTGGAAG AAGAGGGAACATCGAACGGCAGCCTTGCTGGGGAGGTGACCAGTCTACCC GCTGGATGGGAGCGGCGGAGCCGAAAGGGCCCACGACGAAGAGAGCATGT CCTACGGCGGGGTCTACTTGCGTGGGACAGCGTGTGGGCTCATCGCTTCG GGAGCGATCGGTCGCTATGGGTCGCACCGAATCGGTCGTTTGCAGACAAG AAGACGATCGGGTTGATGCCAACATTAGAACTGGTGATGATTGTCTGTGT TTGATTGCCTCGCCGAAGATGATATCTGTGGCGGCGTATTTGCTTATGCC TGATGGGAAGACTCTGGGTGAGTGGTTGGAGACTGAGTTTGAGCCGCGAA TAGCCCCTGACGAGCAAGGCGTTGCCATGGCGGTGACCACAGCCGGAGAC TGGGCGCGGGTGTGGGGAAAACTGCTTCATATGTTCCTACAAGTGGTACG AGGTGTGGAGTATCTCCATGTTCAGGGAATCGTCCACAACGGGATCTCCA CGGACAGCGTTTGGGTGAGAGTGCCATCGTGCGGCATGTATTGTATATGT ATGTACAATTAGCGTGGTCTTCGTCAGTGCGGTGTTGCTGCGGTATTTTG AACTTAGGCTCCAGAGTGTTTGCATGATGCTGAAAGCGGTATCAACCATG TGATGTTTTGAATGTTTGCAGGTTATTTGCAGGTTATTTGCTCAATCGAA CGCCAAGGGAAAGAAGCACTCGAATAGTTGAAACCTTATTAACTCTTATG GCACCAGAGGCTGAAATATAACAATGACGGCATCTGACATGCCCCCTGCT AAAAAGCCAGGAAATGGGGAGGGAGGGGGTCCTGTTCATGAAGGGGGGGG GTGGCTCTCGACTTCATAGTGCTGGAGTATGGTAGTGGACTGCACACGAA AAACATAGGGTCATGCCAATCAAAAACGTGCCCTCTCCTTTACATCGATC AAGTTGTTCTGGAGTCAAAACATCCCTACAGATATCTTCCACCGGATTTG GGTGGAGCAAACTTCCCGTCTTCGTCTTTCGTTTTTGGGCTGCTGTGCTT TTTGGGCGACGTCCTTTTGGTCTGTCCTTTTAGTTGGGTGGGTTTTCATG GGCGCAACAGACGCATATCATCGATGACGAAGATGACAGGGATGGGAGCG CATGGTGTGCCCGAGTACCCTTCCACCATCGCTGCGGCTGATGCTCTCAA CAACAACTCTTTCTGTAATTTGTTGCCTCCACTGTTGTCTGCGGGTGTCG GAACATCGCCGTAAAAGCCATGGTAACGTTTTTGCTTCCATGTTCTTACG CGAGTTTTTGTGTGGTACACACACGCTTTATAGTCAGTCACTCGTGACGA GGGGTATGCTTCGCGTTTCAATCAAGTGCTGTTGCTGTCGTGGAATGCAA AACCATGTCAACTCTTGTGTGTGTTTGTAATAGCTATAAACATGATATTC GTGAAATGGAGAACGTATTTTTTTGGAAAATGAGCTCCATATTTTTTTGT CCATGCCACCCCATTTTCCTGCTTGGTGTAGTTTCCGACGAACAAGGCCG ATTCGGTTGGTTGTTAGCTCAATCAAGAGCTCTCGGTCGCCTGGTGATGG CAATACCTCAACTGACTGAATCCGATCGATGGTTCGGAATTTATGGCAGT GACAAGAATGGGCGGAAAACCGATTAATCCATTCGACGCGGATTTTTCAA TCGGTGCTCTTGCTTGCAGCAGCCCAGATAGGCCTTTCAACCTGTTGTAA CTCGCCACCGGGACTACTGGCGACTGTGCAGCAAGTATCTTTGTGCTGCT ATGAGAAATGCCATTTGTTTGAGCTGCTGCACGCAGTCTAACTGGTCGAA ACGAGGGCGCTAGAACGTGTCGCATAAAAAAAAAGTATGGATTTCAGGCT CGTTCTCCAAAAAAAAGTTCGTTCTCTATTTCACCAATATCAGGTTTATA GCACTGTCTGTCCTCTTTGTAGAGCTAGCTCCCCATCCACGTAGTTATGC TGTGGGCGTCCATCACAAAACAAGTCTGAAACGTTTTTCAACTGTTTTTT GGGCAGGGAGTTTTCAGGGATTTACATGATCCGGTGCCATAAGGGTTAAT ATAGATCAACGTGGTATCTGACCACCTTTGTCTTACACTCCCCACGTTTA CCACGTTACTTCCCAATCATCGTGTTCGGCTGTTGCAATTTTTTTACCGC TACTGGTCCCTGCTTTGGCCGCATGTGCTGTTCGACAGTGCTCATCAAAC CCCATCGAAACTCATCGATACAAGGTACTTTTCATTTTTGTCGAGTGGAA TAGCACCTAGCGTGAAACCATTTACACATTTTTTTTGCTCGCCGTGCTCT GTATCTTTGCCGATCAAAGGTTGGCGCCGACGGGGTATGCCGTATTGGAA GCGTGGGTCATGCGACTCCGCCCGGCCGACGGCGACCACCTACTGAAGCG GGTCCATTGCAGCATTTCTTCAGCCCCGAGCGACGGCGGGGTGATCGAGT TGATTCGCACTCAGACGTTTTTTCGTTGGGGATATTGCTGCGAGAATTGT GGTGTGCGTATCTTCGTGCAAGGGGTTTCGGTAGAAATAGTGTTGATGAG GTAGTGACGTCCAAATGGGTGGAATTGGGGCGGCCGGTGGATGCGAGTGA TCTATTAGATTTCGAGCTTGTGAAACAGATGTTGGCTAACGACCCCTTCG ATCGGCCGGACTGTTTCGAGTTGATACATTCTCTGGGCGGG
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Coding sequence (CDS) from alignment at H-paniculata_contig20665:219..3459+

>mRNA_H-paniculata_contig20665.5365.1 ID=mRNA_H-paniculata_contig20665.5365.1|Name=mRNA_H-paniculata_contig20665.5365.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2772bp|location=Sequence derived from alignment at H-paniculata_contig20665:219..3459+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACCAGGTTAAACTTGCCGGAGCGCGTCGCCATACCACAACTGGGGCGACT
GAGAGAGCTAATGTTCCGCGAAGCCTGTCTTCTTGACTCTCTTGACCATG
AGTGCGTGGTGCGTTTGGAGTGCGCGTGGCTTGAACAGCGCGTCTGTGAG
ACGCCAAGGGGTCTCGGCGATTCGCTTTCAGATCGCCAAGGCGCGACCGC
TGGAAAGAACAACCCAGTCATACCCACCGCGAAACGAAGGGACGAAGGGA
GCGGCGGATTCGCTCAGAAGGCTTGCTGGTTGCTGCAGAGTGTGGAGCAG
TCTGCACCCAACAGCAGTGCATCCAATACGCAACACCGATGTCGTTCGCG
TTCTTTGACAAATTCATGCCCTTCAATATGTGACGAAGACCCCGTCGCTG
CGCTCCGCCCCTTCGTGCCGTGGACTGTCGAAGAGCAAGAGGCCGACAGC
GATTTCTCTGATACCGAAGAAGGCAAACAGGGCATGCCCATCAGTGGAAG
AAGAGGGAACATCGAACGGCAGCCTTGCTGGGGAGGTGACCAGTCTACCC
GCTGGATGGGAGCGGCGGAGCCGAAAGGGCCCACGACGAAGAGAGCATGT
CCTACGGCGGGGTCTACTTGCGTGGGACAGCGTGTGGGCTCATCGCTTCG
GGAGCGATCGGTCGCTATGGGTCGCACCGAATCGGTCGTTTGCAGACAAG
AAGACGATCGGGTTGATGCCAACATTAGAACTGGTGATGATTGTCTGTGT
TTGATTGCCTCGCCGAAGATGATATCTGTGGCGGCGTATTTGCTTATGCC
TGATGGGAAGACTCTGGGTGAGTGGTTGGAGACTGAGTTTGAGCCGCGAA
TAGCCCCTGACGAGCAAGGCGTTGCCATGGCGGTGACCACAGCCGGAGAC
TGGGCGCGGGTGTGGGGAAAACTGCTTCATATGTTCCTACAAGTGGTACG
AGGTGTGGAGTATCTCCATGTTCAGGGAATCGTCCACAACGGGATCTCCA
CGGACAGCGTTTGGACCAGGTTAAACTTGCCGGAGCGCGTCGCCATACCA
CAACTGGGGCGACTGAGAGAGCTAATGTTCCGCGAAGCCTGTCTTCTTGA
CTCTCTTGACCATGAGTGCGTGGTGCGTTTGGAGTGCGCGTGGCTTGAAC
AGCGCGTCTGTGAGACGCCAAGGGGTCTCGGCGATTCGCTTTCAGATCGC
CAAGGCGCGACCGCTGGAAAGAACAACCCAGTCATACCCACCGCGAAACG
AAGGGACGAAGGGAGCGGCGGATTCGCTCAGAAGGCTTGCTGGTTGCTGC
AGAGTGTGGAGCAGTCTGCACCCAACAGCAGTGCATCCAATACGCAACAC
CGATGTCGTTCGCGTTCTTTGACAAATTCATGCCCTTCAATATGTGACGA
AGACCCCGTCGCTGCGCTCCGCCCCTTCGTGCCGTGGACTGTCGAAGAGC
AAGAGGCCGACAGCGATTTCTCTGATACCGAAGAAGGCAAACAGGGCATG
CCCATCAGTGGAAGAAGAGGGAACATCGAACGGCAGCCTTGCTGGGGAGG
TGACCAGTCTACCCGCTGGATGGGAGCGGCGGAGCCGAAAGGGCCCACGA
CGAAGAGAGCATGTCCTACGGCGGGGTCTACTTGCGTGGGACAGCGTGTG
GGCTCATCGCTTCGGGAGCGATCGGTCGCTATGGGTCGCACCGAATCGGT
CGTTTGCAGACAAGAAGACGATCGGGTTGATGCCAACATTAGAACTGGTG
ATGATTGTCTGTGTTTGATTGCCTCGCCGAAGATGATATCTGTGGCGGCG
TATTTGCTTATGCCTGATGGGAAGACTCTGGGTGAGTGGTTGGAGACTGA
GTTTGAGCCGCGAATAGCCCCTGACGAGCAAGGCGTTGCCATGGCGGTGA
CCACAGCCGGAGACTGGGCGCGGGTGTGGGGAAAACTGCTTCATATGTTC
CTACAAGTGGTACGAGGTGTGGAGTATCTCCATGTTCAGGGAATCGTCCA
CAACGGGATCTCCACGGACAGCGTTTGGGTTGGCGCCGACGGGGTATGCC
GTATTGGAAGCGTGGGTCATGCGACTCCGCCCGGCCGACGGCGACCACCT
ACTGAAGCGGGTCCATTGCAGCATTTCTTCAGCCCCGAGCGACGGCGGGG
TGATCGAGTTGATTCGCACTCAGACGTTTTTTCGTTGGGGATATTGCTGC
GAGAATTGTGGTGTGCGTATCTTCGTGCAAGGGGTTTCGGTAGAAATAGT
GTTGATGAGGTAGTGACGTCCAAATGGGTGGAATTGGGGCGGCCGGTGGA
TGCGAGTGATCTATTAGATTTCGAGCTTGTGAAACAGATGTTGGCTAACG
ACCCCTTCGATCGGCCGGACTGTTTCGAGTTGATACATTCTCTGGGCGGG
GTTGGCGCCGACGGGGTATGCCGTATTGGAAGCGTGGGTCATGCGACTCC
GCCCGGCCGACGGCGACCACCTACTGAAGCGGGTCCATTGCAGCATTTCT
TCAGCCCCGAGCGACGGCGGGGTGATCGAGTTGATTCGCACTCAGACGTT
TTTTCGTTGGGGATATTGCTGCGAGAATTGTGGTGTGCGTATCTTCGTGC
AAGGGGTTTCGGTAGAAATAGTGTTGATGAGGTAGTGACGTCCAAATGGG
TGGAATTGGGGCGGCCGGTGGATGCGAGTGATCTATTAGATTTCGAGCTT
GTGAAACAGATGTTGGCTAACGACCCCTTCGATCGGCCGGACTGTTTCGA
GTTGATACATTCTCTGGGCGGG
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