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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 2183 |
| Cds size | 1854 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2056.5331.1 >prot_H-paniculata_contig2056.5331.1 ID=prot_H-paniculata_contig2056.5331.1|Name=mRNA_H-paniculata_contig2056.5331.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=618bp
MVVGLSVLTSVGEASGSNNSPAAGGGLISNNGAGGPGESLLLFGMKKSRT
MDLTHHLGSSSPSSGASATAAAAGGGSLRSSLREDGSSSPRSLALCNRED
CTRQRSWGVSKTPIFSSSRNDGTAWGAASHEGQANGFEGNHGDGRETEET
SDSIDVRGSLPPLSPRSSQEHVERERERERNRRHERDCGRDSRGGGGSER
HRSPRNEPGGADGDREGGKGGDRKFRSSPRNCCSHGNDDSSAGGDGGAEF
MPAVSLFPSSRSGAGAERSGSHAARCVRPSSAERSVALPPGRDRSDDDGD
DDDDGGGGSRRREQHRLPSPRGCLPREMGTNAGLHEGGGNDSIVNRQQAS
FLSASARGERGGGRSLSQSGPSGRHDQSHSQYKKDAAGRKVFGSSLGSSD
EGFGHSTQSPGHRPASPTTLIPLRAALTTEGVEKRNTHGNNCGSRRHDVS
ARCEHGVSARTDQEDERSRKLANDEKDSGDTDDDVLPTERPQAGPRGEPS
AESKGADNEEEEEDAKAGGFSHPGSSRDGAERGVAGIAVSGVRRPDARSR
QRNSSCTSSLSSCSSERGAREASVAVMRLGRGRSGVEVAVDEEKARVDEN
LRDEHVHDVRRNRGGIL* back to topmRNA from alignment at H-paniculata_contig2056:5897..9890+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2056.5331.1 ID=mRNA_H-paniculata_contig2056.5331.1|Name=mRNA_H-paniculata_contig2056.5331.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3994bp|location=Sequence derived from alignment at H-paniculata_contig2056:5897..9890+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAGGCGGTCGCGGCCGCGACTTTTCGGCAGCATCAAGTTCAAGCCGGGTA
GGGCTCGCAGGCGGGGGCGGTAACGCGGCCAACACCAGCTCCAACCCAGG
ACCGGGGGCCAGTTTACGCGAGACCCTAACTCGCATAAACTCTCGACTAG
GCGTGGGGCACCCCGCCCGAAGCAAAACGAACATGGTTGTGGGTCTGAGC
GTACTGACTTCCGTAGGAGAAGCATCAGGGTCCAATAATAGTCCGGCAGC
TGGCGGGGGTTTGATCAGCAACAACGGTGCGGGAGGTCCGGGGGAAAGCC
TTTTGCTATTCGGGATGAAAAAATCGCGAACGATGGATCTTACTCATCAT
TTGGGGTCGTCGTCGCCGTCGTCCGGGGCGTCGGCGACGGCGGCAGCGGC
CGGTGGTGGGTCCCTAAGATCTTCTCTTCGGGAAGACGGGTCCTCCTCGC
CTCGTTCGCTCGCTCTGTGTAACAGGGAGGATTGCACTCGCCAAAGATCT
TGGGGCGTCAGTAAAACCCCTATTTTCTCTTCTTCTCGGAATGATGGCAC
GGCATGGGGGGCAGCGTCTCACGAAGGCCAGGCAAATGGTTTCGAGGGCA
ATCATGGAGATGGGAGGGAGACAGAGGAAACTAGCGATAGCATTGATGTT
CGCGGTAGTCTACCGCCGCTCAGCCCACGCAGCAGTCAGGAGCACGTTGA
GCGAGAGCGGGAACGAGAGCGCAACCGGCGACACGAACGAGATTGCGGTC
GTGATAGCCGCGGCGGGGGAGGGTCCGAGCGACATCGTAGCCCACGAAAC
GAACCAGGCGGTGCCGACGGCGATCGAGAAGGAGGCAAAGGAGGGGATCG
TAAATTTCGATCCTCACCGAGGAACTGCTGCTCTCACGGTAACGATGATT
CTAGCGCCGGCGGGGATGGGGGAGCCGAGTTCATGCCAGCGGTTTCGTTG
TTTCCATCGTCTAGGTCGGGGGCAGGAGCAGAAAGAAGTGGGTCGCATGC
CGCAAGATGTGTGAGGCCTTCTTCCGCGGAGAGATCGGTGGCGCTTCCAC
CGGGAAGGGATAGAAGCGACGATGACGGCGACGACGATGATGATGGCGGC
GGTGGCAGCAGGCGTCGTGAGCAGCATCGACTACCGTCGCCTCGGGGTTG
CTTGCCGAGGGAAATGGGGACAAACGCCGGACTGCATGAAGGAGGGGGCA
ACGATAGCATAGTGAACAGGCAGCAGGCAAGCTTCTTGTCGGCGTCGGCA
CGGGGCGAAAGGGGCGGAGGGAGGTCGCTGTCGCAGTCAGGTCCATCCGG
TCGACATGTGAGTTACGCTAGCATGCACAGTACAGACAGTGGGCTGCAAA
GTTGGCGAGGGCTCTTTGTGGCGAGGGTTTGGTTGTCTTTCTTCATGAGG
ATCGTTACCACCTGAACGCAGGGGTCCAGCTCAAAAATCTTGGGGAGAAA
CAGAAACTGAAAATAGCGAGTAATTTTCTCGCACTATGCCTAGATCTCCT
GCGATGGTGTACCCTTAGAAGTACCTGGTTTCGCAGCAGTTACTCCGTAC
GATGGCTCCCAAGGGCGAATTATTTGCCTATAGTTGTATATGTTTGCCAT
TTCGTTGTTACTCTGAATGACTTCCCCGTATCGAGACTGTACTGTGAGTG
TCGATCGTTCACTTATTGCGCTTGCCGGGGATTTGTTTTAACCCCCGGAG
GGCTAAGGCAAAAACCTTTACCGATGCTTCCATATTCAAGTATTTTACGC
GTGCCGTGGATGTGGCAGCTGCCGATATTGGTCGGGGCGGCCACAGAAGC
AGGAATTACGAAGTGGTTGTTCCACAGACAAATTATCACGGCAGTGTGTC
ATCTGTGGATTGACAGCGTGCTGAAGCAGTCAAGAGGAGATAATTTGATT
CCTCCATGCGATACATCCCGAACTGACGTGGGCATATCCTTTTGAAATTT
CTCCGAAAGATCGACGAATGTTCAGTAGAGCTCCAGATTAGAGTGCAGAT
TGAATATCACCGCACTTATACGGACAGCGCGGTCGGGTGCTCGTAGCATC
GCTGACACGTCGACAGTGTGGATATCTGAAACACTTGAGCGACATGTTCC
CGCGACATTGTCACCGTACTGTTGGGGGAAAATTACTGGCCGCTGAACGT
TCTCCCGTTTATCACACCTTTTCGACCGTGTTTTTCTCACCCGCGTGTAT
ATGTTCATATGTTGGTATCTCAATGTTCCTCGATGCACAGGATTTATGCG
TCGGCATATTTCCCCACGAAACATCCAGATATCCTGTCATTCGATCGAAA
AACAAGGAGTTCTGTTGTATTTTCATCTGTAAAGACAAGCCACAGTTGGA
CAAGTCAGTACGACAACCTCCGCATACTTGAGTTTTCTTGAAGACGCCCC
CCCTACTGAGAATAGACACCGTGGTGCCTTATTGTCAAATACACACTTAT
CAAGGCCTCAATTTCATCTCTTCGTATAGAGGAGGAACGCAGCCCGCCCT
TGCTCTAGATTTCAACTCTTGACCGCAACGATTGCACAACTAAACTGTAC
ATGCTCATTGCTCTGGGCAAACACACGCTTTCTAACTGTGCGACAACAAA
TAATCAGGATCAATCCCATTCCCAATATAAGAAAGATGCTGCGGGGCGGA
AAGTCTTCGGCTCTTCGCTCGGCTCCTCCGACGAGGGTTTCGGACATTCA
ACCCAGTCACCAGGGCATCGGCCGGCATCTCCCACCACGTTGATTCCCTT
GCGCGCAGCCCTCACAACGGAGGGCGTCGAAAAAAGAAACACCCACGGCA
ATAATTGCGGCAGCAGACGTCACGATGTGAGCGCGCGGTGTGAGCACGGT
GTAAGCGCACGGACGGATCAAGAGGATGAGAGGTGAGAAAGCTCTTCGTA
ACAATCACTACACGCGAAGAGCGTGTACGGTGCCGTTACAGTTCAGCATT
GATAACCAGTGCGTAGGAGAGAAAACTCAAAATGATCAAGCCAGGCGTTT
CCCGCATTTGCTCCAAAGCATATCATAGCTTTCCGACAGAACTCTGCCTA
TAAAGAGGAACCAATTGGCGAGTATAGGGCACGAGTACGCCTACACCAGT
AGTAGCATCGTTTTCTGTCGTGGTTGGCTATGCCGAGCATTCAGCATATA
GAGCTCTAAACACACGTCGTCCGCGTCCTTTACAGCAAACTGTGCAGCGC
CTGTGACCTGGACGGCCCGATGACGTAATCAAACTTCCGATTTCGCTGAT
TGCAGTCTCCGTAAGAAATGGCAGAGGGTGGTGTCGATTCTACGCTCTTC
CTGTGTGATTTCGTTTGTGAAAGACCCCGTCCCTTATTCATCCTCCCGCC
CGCCCTTCTCTTTTGGTGCTCTTGTTATACGGCGAATGCGAAGGTCACGA
AAGCTCGCGAATGATGAAAAGGACAGCGGTGACACCGACGATGACGTGTT
ACCCACGGAGAGGCCACAAGCTGGACCAAGAGGGGAGCCTTCAGCCGAAA
GCAAGGGCGCAGACAATGAGGAGGAGGAAGAGGACGCGAAAGCGGGCGGG
TTCAGCCATCCCGGTAGTTCCCGGGACGGTGCAGAGAGGGGAGTGGCTGG
GATAGCTGTAAGTGGTGTTCGAAGACCCGACGCGAGAAGTCGACAACGAA
ATTCGTCCTGCACCTCGTCCCTCTCTTCCTGTTCCTCCGAACGGGGAGCA
AGGGAAGCATCTGTAGCGGTGATGAGGTTAGGGCGTGGGAGGTCCGGGGT
AGAAGTGGCAGTTGATGAAGAGAAGGCGAGAGTTGATGAAAACTTACGTG
ATGAACACGTACATGATGTGCGGAGGAATCGCGGCGGCATTTTGTAGGTC
CTGGTGTTGCAGCAAAGAGAGTCAATACGGGAACGGACCTGTACCGGCTT
GGTGATAGAGAGTACAATTCAGCTTACCTATAGCTGCCTTTTGTGGTTTG
CAAAGAAAATATGTTGTAACAACAAGCGGGTGTCGTACGAGCGC back to topCoding sequence (CDS) from alignment at H-paniculata_contig2056:5897..9890+ >mRNA_H-paniculata_contig2056.5331.1 ID=mRNA_H-paniculata_contig2056.5331.1|Name=mRNA_H-paniculata_contig2056.5331.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3708bp|location=Sequence derived from alignment at H-paniculata_contig2056:5897..9890+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTTGTGGGTCTGAGCGTACTGACTTCCGTAGGAGAAGCATCAGGGTC
CAATAATAGTCCGGCAGCTGGCGGGGGTTTGATCAGCAACAACGGTGCGG
GAGGTCCGGGGGAAAGCCTTTTGCTATTCGGGATGAAAAAATCGCGAACG
ATGGATCTTACTCATCATTTGGGGTCGTCGTCGCCGTCGTCCGGGGCGTC
GGCGACGGCGGCAGCGGCCGGTGGTGGGTCCCTAAGATCTTCTCTTCGGG
AAGACGGGTCCTCCTCGCCTCGTTCGCTCGCTCTGTGTAACAGGGAGGAT
TGCACTCGCCAAAGATCTTGGGGCGTCAGTAAAACCCCTATTTTCTCTTC
TTCTCGGAATGATGGCACGGCATGGGGGGCAGCGTCTCACGAAGGCCAGG
CAAATGGTTTCGAGGGCAATCATGGAGATGGGAGGGAGACAGAGGAAACT
AGCGATAGCATTGATGTTCGCGGTAGTCTACCGCCGCTCAGCCCACGCAG
CAGTCAGGAGCACGTTGAGCGAGAGCGGGAACGAGAGCGCAACCGGCGAC
ACGAACGAGATTGCGGTCGTGATAGCCGCGGCGGGGGAGGGTCCGAGCGA
CATCGTAGCCCACGAAACGAACCAGGCGGTGCCGACGGCGATCGAGAAGG
AGGCAAAGGAGGGGATCGTAAATTTCGATCCTCACCGAGGAACTGCTGCT
CTCACGGTAACGATGATTCTAGCGCCGGCGGGGATGGGGGAGCCGAGTTC
ATGCCAGCGGTTTCGTTGTTTCCATCGTCTAGGTCGGGGGCAGGAGCAGA
AAGAAGTGGGTCGCATGCCGCAAGATGTGTGAGGCCTTCTTCCGCGGAGA
GATCGGTGGCGCTTCCACCGGGAAGGGATAGAAGCGACGATGACGGCGAC
GACGATGATGATGGCGGCGGTGGCAGCAGGCGTCGTGAGCAGCATCGACT
ACCGTCGCCTCGGGGTTGCTTGCCGAGGGAAATGGGGACAAACGCCGGAC
TGCATGAAGGAGGGGGCAACGATAGCATAGTGAACAGGCAGCAGGCAAGC
TTCTTGTCGGCGTCGGCACGGGGCGAAAGGGGCGGAGGGAGGTCGCTGTC
GCAGTCAGGTCCATCCGGTCGACATATGGTTGTGGGTCTGAGCGTACTGA
CTTCCGTAGGAGAAGCATCAGGGTCCAATAATAGTCCGGCAGCTGGCGGG
GGTTTGATCAGCAACAACGGTGCGGGAGGTCCGGGGGAAAGCCTTTTGCT
ATTCGGGATGAAAAAATCGCGAACGATGGATCTTACTCATCATTTGGGGT
CGTCGTCGCCGTCGTCCGGGGCGTCGGCGACGGCGGCAGCGGCCGGTGGT
GGGTCCCTAAGATCTTCTCTTCGGGAAGACGGGTCCTCCTCGCCTCGTTC
GCTCGCTCTGTGTAACAGGGAGGATTGCACTCGCCAAAGATCTTGGGGCG
TCAGTAAAACCCCTATTTTCTCTTCTTCTCGGAATGATGGCACGGCATGG
GGGGCAGCGTCTCACGAAGGCCAGGCAAATGGTTTCGAGGGCAATCATGG
AGATGGGAGGGAGACAGAGGAAACTAGCGATAGCATTGATGTTCGCGGTA
GTCTACCGCCGCTCAGCCCACGCAGCAGTCAGGAGCACGTTGAGCGAGAG
CGGGAACGAGAGCGCAACCGGCGACACGAACGAGATTGCGGTCGTGATAG
CCGCGGCGGGGGAGGGTCCGAGCGACATCGTAGCCCACGAAACGAACCAG
GCGGTGCCGACGGCGATCGAGAAGGAGGCAAAGGAGGGGATCGTAAATTT
CGATCCTCACCGAGGAACTGCTGCTCTCACGGTAACGATGATTCTAGCGC
CGGCGGGGATGGGGGAGCCGAGTTCATGCCAGCGGTTTCGTTGTTTCCAT
CGTCTAGGTCGGGGGCAGGAGCAGAAAGAAGTGGGTCGCATGCCGCAAGA
TGTGTGAGGCCTTCTTCCGCGGAGAGATCGGTGGCGCTTCCACCGGGAAG
GGATAGAAGCGACGATGACGGCGACGACGATGATGATGGCGGCGGTGGCA
GCAGGCGTCGTGAGCAGCATCGACTACCGTCGCCTCGGGGTTGCTTGCCG
AGGGAAATGGGGACAAACGCCGGACTGCATGAAGGAGGGGGCAACGATAG
CATAGTGAACAGGCAGCAGGCAAGCTTCTTGTCGGCGTCGGCACGGGGCG
AAAGGGGCGGAGGGAGGTCGCTGTCGCAGTCAGGTCCATCCGGTCGACAT
GATCAATCCCATTCCCAATATAAGAAAGATGCTGCGGGGCGGAAAGTCTT
CGGCTCTTCGCTCGGCTCCTCCGACGAGGGTTTCGGACATTCAACCCAGT
CACCAGGGCATCGGCCGGCATCTCCCACCACGTTGATTCCCTTGCGCGCA
GCCCTCACAACGGAGGGCGTCGAAAAAAGAAACACCCACGGCAATAATTG
CGGCAGCAGACGTCACGATGTGAGCGCGCGGTGTGAGCACGGTGTAAGCG
CACGGACGGATCAAGAGGATGAGAGGATCAATCCCATTCCCAATATAAGA
AAGATGCTGCGGGGCGGAAAGTCTTCGGCTCTTCGCTCGGCTCCTCCGAC
GAGGGTTTCGGACATTCAACCCAGTCACCAGGGCATCGGCCGGCATCTCC
CACCACGTTGATTCCCTTGCGCGCAGCCCTCACAACGGAGGGCGTCGAAA
AAAGAAACACCCACGGCAATAATTGCGGCAGCAGACGTCACGATGTGAGC
GCGCGGTGTGAGCACGGTGTAAGCGCACGGACGGATCAAGAGGATGAGAG
GTCACGAAAGCTCGCGAATGATGAAAAGGACAGCGGTGACACCGACGATG
ACGTGTTACCCACGGAGAGGCCACAAGCTGGACCAAGAGGGGAGCCTTCA
GCCGAAAGCAAGGGCGCAGACAATGAGGAGGAGGAAGAGGACGCGAAAGC
GGGCGGGTTCAGCCATCCCGGTAGTTCCCGGGACGGTGCAGAGAGGGGAG
TGGCTGGGATAGCTGTAAGTGGTGTTCGAAGACCCGACGCGAGAAGTCGA
CAACGAAATTCGTCCTGCACCTCGTCCCTCTCTTCCTGTTCCTCCGAACG
GGGAGCAAGGGAAGCATCTGTAGCGGTGATGAGGTTAGGGCGTGGGAGGT
CCGGGGTAGAAGTGGCAGTTGATGAAGAGAAGGCGAGAGTTGATGAAAAC
TTACGTGATGAACACGTACATGATGTGCGGAGGAATCGCGGCGGCATTTT
GTAGGTCACGAAAGCTCGCGAATGATGAAAAGGACAGCGGTGACACCGAC
GATGACGTGTTACCCACGGAGAGGCCACAAGCTGGACCAAGAGGGGAGCC
TTCAGCCGAAAGCAAGGGCGCAGACAATGAGGAGGAGGAAGAGGACGCGA
AAGCGGGCGGGTTCAGCCATCCCGGTAGTTCCCGGGACGGTGCAGAGAGG
GGAGTGGCTGGGATAGCTGTAAGTGGTGTTCGAAGACCCGACGCGAGAAG
TCGACAACGAAATTCGTCCTGCACCTCGTCCCTCTCTTCCTGTTCCTCCG
AACGGGGAGCAAGGGAAGCATCTGTAGCGGTGATGAGGTTAGGGCGTGGG
AGGTCCGGGGTAGAAGTGGCAGTTGATGAAGAGAAGGCGAGAGTTGATGA
AAACTTACGTGATGAACACGTACATGATGTGCGGAGGAATCGCGGCGGCA
TTTTGTAG back to top
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