mRNA_H-paniculata_contig20548.5327.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig20548.5327.1 vs. uniprot
Match: D7FIR4_ECTSI (Nucleolar GTP-binding protein 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIR4_ECTSI) HSP 1 Score: 282 bits (721), Expect = 3.620e-88 Identity = 178/219 (81.28%), Postives = 188/219 (85.84%), Query Frame = 1
Query: 1 REEDRLSIEKLAESAGVELHLMSNETEEG-QEVKTAACDKLLQARVDARMAGKKVGGLVSRLTVAMPKARDERDRAPTIPPSVLAKRAEAA-------GDGMNVEGERAAVGTGAERKTEKDLMWENGGPGVYSCDYRKYYDLKDDNWKMDRIPEIMDGKNVADFVDEDIDRKLALLEQEEXXXXXXXXXXXXXXXXXXXXXRALATAIRDKSAIIKKE 633
+EEDR+SIEKLA+SAGVELHLMSNETEEG QEVKTAACDKLLQARVDARMAGKKVGGLVSRLTVAMPKARD RDRAPTIP SV+AKRA G M+V+G RKTEKDLMWENGGPGVYSCDYRKYYDLKDD WKMDRIPEIMDGKNVAD+VD+DID KLALLEQ XXXXXXXXXXXXXXXXXXXXXRALA AIRD+S +IKKE
Sbjct: 300 KEEDRVSIEKLADSAGVELHLMSNETEEGVQEVKTAACDKLLQARVDARMAGKKVGGLVSRLTVAMPKARDGRDRAPTIPASVVAKRAAXXXXXXXXXGSSMDVDGGEGGRSQPTARKTEKDLMWENGGPGVYSCDYRKYYDLKDDAWKMDRIPEIMDGKNVADYVDQDIDAKLALLEQXXXXXXXXXXXXXXXXXXXXXXXRALAQAIRDRSKVIKKE 518
BLAST of mRNA_H-paniculata_contig20548.5327.1 vs. uniprot
Match: A0A836CDN0_9STRA (Nucleolar GTP-binding protein 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDN0_9STRA) HSP 1 Score: 190 bits (483), Expect = 2.690e-53 Identity = 110/179 (61.45%), Postives = 126/179 (70.39%), Query Frame = 1
Query: 1 REEDRLSIEKLAESAGVELHLMSNETEEG-QEVKTAACDKLLQARVDARMAGKKVGGLVSRLTVAMPKARDERDRAPTIPPSVLAKRAEAA-GDGMNVE----GERAAVGTGAERKTEKDLMWENGGPGVYSCDYRKYYDLKDDNWKMDRIPEIMDGKNVADFVDEDIDRKLALLEQEE 519
RE DR +I A VEL MSN +EEG VKTAACDKLLQARVDAR+AGKKVG +++RLTVAMP RD R R +IP SVLA RA A G G N + R TEK+ MW NGGPGVY+CDYRKYYDL D+WK D+IPEIMDGKNVAD+VD +ID +LALLE+EE
Sbjct: 300 REPDRTNILAAAAGVNVELMFMSNVSEEGVMAVKTAACDKLLQARVDARLAGKKVGEVMNRLTVAMPTPRDARARGASIPDSVLAARAAAKNGAGSNAQMSXXXXXXXXXXXXARLTEKERMWLNGGPGVYNCDYRKYYDLASDDWKFDKIPEIMDGKNVADYVDAEIDARLALLEREE 478
BLAST of mRNA_H-paniculata_contig20548.5327.1 vs. uniprot
Match: A0A6V1RDW6_HETAK (Nucleolar GTP-binding protein 1 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RDW6_HETAK) HSP 1 Score: 172 bits (437), Expect = 7.360e-47 Identity = 103/210 (49.05%), Postives = 126/210 (60.00%), Query Frame = 1
Query: 7 EDRLSIEKLAESAGVELHLMSNETEEG-QEVKTAACDKLLQARVDARMAGKKVGGLVSRLTVAMPKARDERDRAPTIPPSVLAKRAEAAGDGMNVEGERAAVGTGAERKTEKDLMWENGGPGVYSCDYRKYYDLKDDNWKMDRIPEIMDGKNVADFVDEDIDRKLALLEQEEXXXXXXXXXXXXXXXXXXXXXRALATAIRDKSAIIKKE 633
EDR +IEK AE +G EL MSN +EEG VK ACDKLL ARV+ R+ GKKV +++RLTVA P+ RD R RA IP SVLA + R A+RKTEKDL ENGG GVYSCD+RKYYDLK + W+ D P+I+DGKNVAD+VD DI KL LE+EE + L A+RDK I +++
Sbjct: 302 EDREAIEKCAEGSGAELMKMSNVSEEGVSAVKNKACDKLLTARVETRLTGKKVTDVMNRLTVAQPRPRDARARAAFIPESVLAAK------------NRMDTDKPAKRKTEKDLQLENGGAGVYSCDFRKYYDLKSEEWRWDVQPQILDGKNVADYVDPDIAAKLEQLEREEEQLAAEYLNEEDMGSDLDEEEKVLHKAVRDKKKITQQQ 499
BLAST of mRNA_H-paniculata_contig20548.5327.1 vs. uniprot
Match: A0A7S1UHB4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHB4_9STRA) HSP 1 Score: 160 bits (404), Expect = 2.040e-42 Identity = 98/213 (46.01%), Postives = 127/213 (59.62%), Query Frame = 1
Query: 4 EEDRLSIEKLAESAG--VELHLMSNETEEG-QEVKTAACDKLLQARVDARMAGKKVGGLVSRLTVAMPKARDERDRAPTIPPSVLAKRAEAAGDGMNVEGERAAVGTGAERKTEKDLMWENGGPGVYSCDYRKYYD-LKDDNWKMDRIPEIMDGKNVADFVDEDIDRKLALLEQEEXXXXXXXXXXXXXXXXXXXXXRALATAIRDKSAIIKK 630
+E R IE++ +AG EL MS E+G V+ ACDKLLQ RVD ++ KKV G+++RLTVA P RD + R IP SVLAKR DGM+ A ER+TEKD MWENGGPGVY DYR+++ L+DD W+ D +PEIMDGKNVADF+D DI+ +LA LE EE + AIRD++ ++K+
Sbjct: 308 QEQRDDIEEMVNAAGPNAELMKMSVLAEDGVMTVRNQACDKLLQQRVDQKLNRKKVDGVLNRLTVAKPAPRDNQTRGAVIPASVLAKR-----DGMDT-----AAADAGERRTEKDRMWENGGPGVYKPDYREHWQGLRDDQWRHDAVPEIMDGKNVADFMDPDIEARLAALEAEEVQLLEEDALNPPDESTLDEETLGIHKAIRDRAGLLKQ 510
BLAST of mRNA_H-paniculata_contig20548.5327.1 vs. uniprot
Match: A0A7S3MAG3_9STRA (Nucleolar GTP-binding protein 1 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAG3_9STRA) HSP 1 Score: 160 bits (406), Expect = 2.270e-42 Identity = 91/171 (53.22%), Postives = 111/171 (64.91%), Query Frame = 1
Query: 13 RLSIEKLAESAGVELHLMSNETEEG-QEVKTAACDKLLQARVDARMA-GKKVGGLVSRLTVAMPKARDERDRAPTIPPSVLAKRAEAAGDGMNVEGERAAVGTGAERKTEKDLMWENGGPGVYSCDYRKYYDLKDDNWKMDRIPEIMDGKNVADFVDEDIDRKLALLEQEE 519
R IE++A AG EL MSN E+ +K AACDKLL+ARVD++++ GK ++SR+TVAMPK RD R P+IP SV K + AV +ER TEK LMW NGGPGVY CDYRKYY L +D W+ D IPE MDGKNV DF DEDI+ +L LE+EE
Sbjct: 323 RARIEEVARKAGAELVPMSNVNEDNISYLKVAACDKLLEARVDSKLSMGKIKDDVLSRITVAMPKPRDSATRGPSIPESVANKAS------------AMAVTGASERLTEKQLMWNNGGPGVYVCDYRKYYQLAEDEWRFDTIPEFMDGKNVTDFFDEDIEARLNALEEEE 481
BLAST of mRNA_H-paniculata_contig20548.5327.1 vs. uniprot
Match: A0A7S2W610_9STRA (Nucleolar GTP-binding protein 1 n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W610_9STRA) HSP 1 Score: 154 bits (389), Expect = 4.730e-40 Identity = 88/172 (51.16%), Postives = 114/172 (66.28%), Query Frame = 1
Query: 7 EDRLSIEKLAESAGVELHLMSNETEEG-QEVKTAACDKLLQARVDARMAGKKVGGLVSRLTVAMPKARDERDRAPTIPPSVLAKRAEAAGDGMNVEGERAAVGTGAERKTEKDLMWENGGPGVYSCDYRKYYDLKDDNWKMDRIPEIMDGKNVADFVDEDIDRKLALLEQEE 519
ED+ ++ + +++G L MS E EVK ACD LL+ RV+ + K+ G+++RLTVAMP +RDE++R TIP SVL RA A EG+ ++KTEKDLMWENGGPGVYSCDYRKYY L+ + D IPEI+DGKN+ADFVD DI +KL LE+EE
Sbjct: 302 EDKELLDGMVKNSGAVLMPMSAAAEINIAEVKQRACDLLLEQRVETKTQSNKLNGILNRLTVAMPVSRDEKERPVTIPESVL--RAREAKANKTEEGDVEMDDAEPKKKTEKDLMWENGGPGVYSCDYRKYYKLRKPEYNFDSIPEIIDGKNIADFVDPDIMQKLEELEKEE 471
BLAST of mRNA_H-paniculata_contig20548.5327.1 vs. uniprot
Match: A0A448YYN1_9STRA (Nucleolar GTP-binding protein 1 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYN1_9STRA) HSP 1 Score: 154 bits (389), Expect = 4.770e-40 Identity = 97/228 (42.54%), Postives = 131/228 (57.46%), Query Frame = 1
Query: 7 EDRLSIEKLAESAGVELHLMSNETEEG-QEVKTAACDKLLQARVDARMAGKKVGGLVSRLTVAMPKARDERDRAPTIPPSVLAKRAEAAGDGMNVEGERAAVG----------------TGAERKTEKDLMWENGGPGVYSCDYRKYYDLKDDNWKMDRIPEIMDGKNVADFVDEDIDRKLALLEQEEXXXXXXXXXXXXXXXXXXXXX---RALATAIRDKSAIIKK 630
E + IE LA+ A L MSN++E G EVK +AC+KLL +RVDAR++GKK+ G+++RL V P RD +R IP +V AE ++ + +R+ G G+ RKT +DLMWENGGPGV++ DYR+ Y+LK+D WK D IPEI+DGKN+AD+VD DI++KLA LE EE A AIRD+ II+K
Sbjct: 255 EKKEMIEALAKDANCSLMTMSNKSEHGVSEVKASACEKLLASRVDARVSGKKIEGVMNRLQVFHPTPRDNVERGAHIPDTVKDAIAEGRIGSVDHKPKRSRSGYAQTKGDTDGGDDDEMNGSYRKTARDLMWENGGPGVWAPDYREQYELKEDEWKFDAIPEIIDGKNIADYVDPDIEKKLADLEMEEEQLLKQLEAERMGEEPESDLDSEEEAAVDAIRDRKKIIRK 482
BLAST of mRNA_H-paniculata_contig20548.5327.1 vs. uniprot
Match: A0A482RSB8_9ARCH (NOG1 family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RSB8_9ARCH) HSP 1 Score: 151 bits (382), Expect = 3.330e-39 Identity = 86/171 (50.29%), Postives = 110/171 (64.33%), Query Frame = 1
Query: 13 RLSIEKLAESAGVELHLMSNETEEG-QEVKTAACDKLLQARVDARM-AGKKVGGLVSRLTVAMPKARDERDRAPTIPPSVLAKRAEAAGDGMNVEGERAAVGTGAERKTEKDLMWENGGPGVYSCDYRKYYDLKDDNWKMDRIPEIMDGKNVADFVDEDIDRKLALLEQEE 519
R IE A+ A EL MSN +EE ++KT ACDKLL+ RVD+++ AG+ ++SR++VA PK RD + RAPTIP D + ++ AA ++ TEK LMW GGPGVYSCDYRKYY L++D WK D +PEIMDGKNV D+ D DI+ KL LE EE
Sbjct: 289 RQRIEDTAKQANAELLPMSNVSEENISKLKTLACDKLLEQRVDSKLSAGRLTNDILSRISVAQPKPRDNKVRAPTIP------------DSLQMDTSMAA-----DKSTEKTLMWAQGGPGVYSCDYRKYYTLENDEWKFDTLPEIMDGKNVLDYYDSDIEEKLNQLEAEE 442
BLAST of mRNA_H-paniculata_contig20548.5327.1 vs. uniprot
Match: A0A7S4MXB5_9STRA (Nucleolar GTP-binding protein 1 n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MXB5_9STRA) HSP 1 Score: 148 bits (373), Expect = 8.790e-38 Identity = 89/180 (49.44%), Postives = 113/180 (62.78%), Query Frame = 1
Query: 37 ESAGVELHLMSNETEEG-QEVKTAACDKLLQARVDARMAGKKVGGLVSRLTVAMPKARDERDRAPTIPPSVLAKRAEAA------------------GDGMNVEGERAAVGTGAERKTEKDLMWENGGPGVYSCDYRKYYDLKDDNWKMDRIPEIMDGKNVADFVDEDIDRKLALLEQEE 519
E+ G L MSN E+G EVK AACDKLL ARV++R++G+KV G+++RL V P ARD R IP SV+ R E +G +GE AA+ ++KT ++LMWENGGPGV+S D+R+ YDL D WK D IPEI+DGKNVAD+VD DID KL LE+EE
Sbjct: 266 ETDGCTLMTMSNHNEKGVSEVKNAACDKLLAARVESRVSGRKVEGVMNRLQVFHPTARDSVARDVCIPESVVKARDEGRLGEQKKSRVGYSVTKEDMENGDAPDGEDAAMDDATKKKTARELMWENGGPGVWSPDFREQYDLLDAEWKFDAIPEILDGKNVADYVDPDIDAKLDKLEREE 445
BLAST of mRNA_H-paniculata_contig20548.5327.1 vs. uniprot
Match: A0A1Z5J5Y7_FISSO (Nucleolar GTP-binding protein 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J5Y7_FISSO) HSP 1 Score: 148 bits (373), Expect = 1.010e-37 Identity = 85/174 (48.85%), Postives = 111/174 (63.79%), Query Frame = 1
Query: 22 IEKLAESAGVELHLMSNETEEG-QEVKTAACDKLLQARVDARMAGKKVGGLVSRLTVAMPKARDERDRAPTIPPSVLAKRAEAA-------GDGMNVEGERAAVGTGAERKTEKDLMWENGGPGVYSCDYRKYYDLKDDNWKMDRIPEIMDGKNVADFVDEDIDRKLALLEQEE 519
+E L + + L MSN +E G EVK AACDKLL++RVD+R+AGKK+ G+++RL V PK RD R +P SVL ++ +N + + K ++LMWENGGPGV++ DYR YDLKDD+WK D IPEI+DGKN+ADFVD DI RKL LE+EE
Sbjct: 307 VEDLVKESNCSLMTMSNISEHGVSEVKMAACDKLLESRVDSRIAGKKIDGVMNRLQVFYPKPRDHVKREAYVPESVLNNKSSVPQRSRVGYAPTVNDDXXXXXMDMHETPKLARELMWENGGPGVWAPDYRDIYDLKDDSWKYDAIPEIIDGKNIADFVDPDILRKLEELEREE 480 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20548.5327.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig20548.5327.1 >prot_H-paniculata_contig20548.5327.1 ID=prot_H-paniculata_contig20548.5327.1|Name=mRNA_H-paniculata_contig20548.5327.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=211bp REEDRLSIEKLAESAGVELHLMSNETEEGQEVKTAACDKLLQARVDARMAback to top mRNA from alignment at H-paniculata_contig20548:43..2872+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig20548.5327.1 ID=mRNA_H-paniculata_contig20548.5327.1|Name=mRNA_H-paniculata_contig20548.5327.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2830bp|location=Sequence derived from alignment at H-paniculata_contig20548:43..2872+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig20548:43..2872+ >mRNA_H-paniculata_contig20548.5327.1 ID=mRNA_H-paniculata_contig20548.5327.1|Name=mRNA_H-paniculata_contig20548.5327.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1266bp|location=Sequence derived from alignment at H-paniculata_contig20548:43..2872+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |