mRNA_H-paniculata_contig20530.5324.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig20530.5324.1 vs. uniprot
Match: A0A6H5JU13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU13_9PHAE) HSP 1 Score: 210 bits (534), Expect = 8.170e-63 Identity = 101/143 (70.63%), Postives = 121/143 (84.62%), Query Frame = 1
Query: 1 GKTLTFEIQGPEPGAEVRKVELDRTFPAVQDPIVYALKDQGQHKVGYVRVREFNSIVTNRLTDALEEMKAGGADEFVLDLRGNGGGAFQSALGIAGLFMENKPITYVVDGSGERAEFKTKTGALVPDAPLVVWVDGMSASASE 429
GKT+TFE++ PE G++ R VELDRTFP+ ++P+ Y +K QG+HKVGY R+R+FNSIV N L DAL EMKA GADEFVLDLRGNGGGAFQSALG+AGLFM+ +PITYVVDGSG+RAEF TK +V + PLVVWVDG SAS+SE
Sbjct: 292 GKTVTFELRSPEAGSKTRSVELDRTFPSTENPVAYRVKSQGEHKVGYARLRDFNSIVANSLRDALVEMKAEGADEFVLDLRGNGGGAFQSALGVAGLFMDAEPITYVVDGSGQRAEFMTKKDGVVTEEPLVVWVDGGSASSSE 434
BLAST of mRNA_H-paniculata_contig20530.5324.1 vs. uniprot
Match: D8LLB8_ECTSI (TSPc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLB8_ECTSI) HSP 1 Score: 209 bits (532), Expect = 5.870e-60 Identity = 101/143 (70.63%), Postives = 120/143 (83.92%), Query Frame = 1
Query: 1 GKTLTFEIQGPEPGAEVRKVELDRTFPAVQDPIVYALKDQGQHKVGYVRVREFNSIVTNRLTDALEEMKAGGADEFVLDLRGNGGGAFQSALGIAGLFMENKPITYVVDGSGERAEFKTKTGALVPDAPLVVWVDGMSASASE 429
GKT+ FE++ PE G++ R VELDRTFP+ ++P+ Y +K QG+HKVGY R+R+FNSIV N L DAL EMKA GADEFVLDLRGNGGGAFQSALG+AGLFM+ KPITYVVDGSG+RAEF TK +V + PLVVWVDG SAS+SE
Sbjct: 1159 GKTVMFELRSPEAGSKTRSVELDRTFPSTENPVAYRVKSQGEHKVGYARLRDFNSIVANSLKDALVEMKAEGADEFVLDLRGNGGGAFQSALGVAGLFMDAKPITYVVDGSGQRAEFMTKKDGVVTEEPLVVWVDGGSASSSE 1301
BLAST of mRNA_H-paniculata_contig20530.5324.1 vs. uniprot
Match: A0A835YMM1_9STRA (ClpP/crotonase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMM1_9STRA) HSP 1 Score: 148 bits (373), Expect = 2.580e-40 Identity = 77/137 (56.20%), Postives = 99/137 (72.26%), Query Frame = 1
Query: 7 TLTFEIQGPEPGAEVRKVELDRTFPAVQDPIVYALKDQGQHKVGYVRVREFNSIVTNRLTDALEEMKAGGADEFVLDLRGNGGGAFQSALGIAGLFMENKPITYVVDGSGERAEFKTKTGALVPDAPLVVWVDGMSA 417
T+TF I P+ G+E R VEL R+F V DP VGY+R++EFN++V +++ +AL +++A GADE++LDLRGNGGGAFQSALGIA LFMEN PITYVVDG G++ F TKT A+ APLVVW+D SA
Sbjct: 161 TITFTITKPDGGSE-RVVELQRSFQKVSDP------------VGYMRIKEFNAVVVDKVREALVDLQAQGADEYILDLRGNGGGAFQSALGIASLFMENAPITYVVDGDGKKVGFNTKTDAVNTSAPLVVWIDRKSA 284
BLAST of mRNA_H-paniculata_contig20530.5324.1 vs. uniprot
Match: A0A7S3XXB5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXB5_HETAK) HSP 1 Score: 139 bits (349), Expect = 5.200e-37 Identity = 71/142 (50.00%), Postives = 100/142 (70.42%), Query Frame = 1
Query: 7 TLTFEIQGPEPGAEVRKVELDRTFPAVQDPIVYAL-KDQGQHKVGYVRVREFNSIVTNRLTDALEEMKAGGADEFVLDLRGNGGGAFQSALGIAGLFMENKPITYVVDGSGERAEFKTKTGALVPDAPLVVWVDGMSASASE 429
T+ FE++ P+ A ++ LDR F + +P+ Y L K++ VGY++++EFNS+ + DAL ++++ GAD +VLDLRGNGGGAFQ A+GI+GLFM+ +PI +VDG G R FKT +V D PLV+WVDG SASASE
Sbjct: 104 TIRFEVRKPDQ-ATSKEYVLDRKFEQIVNPVFYFLEKEKDGSSVGYIKLKEFNSLAKQSVKDALVDLESKGADRYVLDLRGNGGGAFQGAIGISGLFMKEQPIVSIVDGYGGRESFKTLPDQVVTDKPLVLWVDGGSASASE 244
BLAST of mRNA_H-paniculata_contig20530.5324.1 vs. uniprot
Match: B7G1X7_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G1X7_PHATC) HSP 1 Score: 128 bits (321), Expect = 5.440e-33 Identity = 70/130 (53.85%), Postives = 88/130 (67.69%), Query Frame = 1
Query: 52 RKVELDRTFPAVQDPIVYALKDQGQH--KVGYVRVREFNSIVTNRLTDALEEMKAGGADEFVLDLRGNGGGAFQSALGIAGLFMENKPITYVVDGSGERAEFKTKTGALV--PDAPLVVWVDGMSASASE 429
R V +DR F ++DPI Y + + KVGY+R+ EFNS+V RL DAL ++KA GA+ FVLDLR N GGAFQSA+ I+ LF+EN+ TYVVD F+T G L P P+VVW+DGMSASASE
Sbjct: 165 RVVVMDRLFQEIKDPIRYKITETRADGTKVGYIRIAEFNSLVKARLEDALRDLKADGANAFVLDLRMNTGGAFQSAVEISSLFIENRVATYVVDSGNVELPFRTTPGRLAIDPTVPMVVWIDGMSASASE 294
BLAST of mRNA_H-paniculata_contig20530.5324.1 vs. uniprot
Match: A0A7S2XWX3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWX3_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.910e-31 Identity = 64/143 (44.76%), Postives = 100/143 (69.93%), Query Frame = 1
Query: 4 KTLTFEIQGPEPGAEVRKVELDRTFPAVQDPIVYAL-KDQGQHKVGYVRVREFNSIVTNRLTDALEEMKAGGADEFVLDLRGNGGGAFQSALGIAGLFMENKPITYVVDGSGERAEFKTKTGALVPDAPLVVWVDGMSASASE 429
KT+ F I+ G V++ L+RTF V +P+ Y++ +D+ + K+GY+R++EFNS+ + +A+E+++ GA VLDLRGN GGAFQSA+G+A LFM+NKP+ +VD G ++ F + + +V D+PLV+ +D SASASE
Sbjct: 284 KTMRFGIKKAS-GGPVKEYTLERTFNKVSNPVSYSMSEDRQKRKIGYIRLKEFNSVGKQNVREAIEDLEQQGAKYLVLDLRGNPGGAFQSAIGMASLFMDNKPVVNIVDSDGGKSPFPSASNQVVTDSPLVLLMDAGSASASE 425
BLAST of mRNA_H-paniculata_contig20530.5324.1 vs. uniprot
Match: A0A7S4R018_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R018_9STRA) HSP 1 Score: 125 bits (314), Expect = 8.740e-31 Identity = 69/152 (45.39%), Postives = 97/152 (63.82%), Query Frame = 1
Query: 7 TLTFEIQGPEP---GAEVRKVELDRTFPAVQDPIVYALKDQGQ------HKVGYVRVREFNSIVTNRLTDALEEMKAGGADEFVLDLRGNGGGAFQSALGIAGLFMENKPITYVVDGSGERAEFKTKTGALVPDA--PLVVWVDGMSASASE 429
T+T +GP+ VR ++LDR F + +PI Y + ++ HKVGY++++EFNS+V L DA ++++ D +VLDLRGN GGAFQSA+ I+ LF EN+ TYVVD +G FKT G +V D P+V+WVDG SASA+E
Sbjct: 353 TMTVLTEGPDDLKGEGYVRDLKLDRQFEQIVNPITYKVSEERSSASSAVHKVGYIQIKEFNSLVERGLRDAFIDLESQNVDAYVLDLRGNPGGAFQSAVEISSLFFENQIATYVVDSNGVELPFKTAKGKVVVDRNDPVVIWVDGRSASATE 504
BLAST of mRNA_H-paniculata_contig20530.5324.1 vs. uniprot
Match: A0A7S1ZFG3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZFG3_TRICV) HSP 1 Score: 120 bits (300), Expect = 3.690e-29 Identity = 69/148 (46.62%), Postives = 95/148 (64.19%), Query Frame = 1
Query: 7 TLTFEIQGPEPGAE---VRKVELDRTFPAVQDPIVYALKDQGQHK--VGYVRVREFNSIVTNRLTDALEEMKAGGADEFVLDLRGNGGGAFQSALGIAGLFMENKPITYVVDGSGERAEFKTKTGALVPDA--PLVVWVDGMSASASE 429
T+T GP+ A VR + L R F ++DP+ Y + ++ VGYVR EFNS+V RL +A+ ++++ GA+ VLD+RGN GGAFQSA+ IAGLF+++ T VVDG+G F+T G +V D P+ VWVDG SASASE
Sbjct: 246 TMTVRTVGPDDLANEGYVRDLALKREFREIKDPVSYRIAERRSDGTVVGYVRASEFNSLVKPRLEEAIRDLESRGANALVLDVRGNPGGAFQSAVEIAGLFVDDALATSVVDGNGVELPFRTSKGRVVADKSHPMAVWVDGRSASASE 393
BLAST of mRNA_H-paniculata_contig20530.5324.1 vs. uniprot
Match: B8BRY2_THAPS (Carboxyl-terminal protease (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BRY2_THAPS) HSP 1 Score: 118 bits (296), Expect = 4.550e-29 Identity = 71/145 (48.97%), Postives = 93/145 (64.14%), Query Frame = 1
Query: 7 TLTFEIQGPEPGAEVRKVELDRTFPAVQDPIVYALKDQGQH--KVGYVRVREFNSIVTNRLTDALEEMKAGGADEFVLDLRGNGGGAFQSALGIAGLFMENKPITYVVDGSGERAEFKTKTGALV--PDAPLVVWVDGMSASASE 429
T T + QG + R V + R F V+DPI Y + + KVGYVR+ EFNSIV +L AL ++++ + +VLD+RGN GGAFQSA+ IAGLFM+NK T VVDG+G +F+T +V P LV+WVDG SASASE
Sbjct: 152 TFTIKSQGEDTS---RDVTMKREFLEVRDPISYRVTETRADGTKVGYVRIAEFNSIVKPKLEAALRDLESQNVNAYVLDVRGNPGGAFQSAVEIAGLFMDNKLATDVVDGNGVDLKFRTSKDRVVIDPTDTLVIWVDGRSASASE 293
BLAST of mRNA_H-paniculata_contig20530.5324.1 vs. uniprot
Match: K0SEE0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SEE0_THAOC) HSP 1 Score: 119 bits (298), Expect = 9.030e-29 Identity = 72/144 (50.00%), Postives = 96/144 (66.67%), Query Frame = 1
Query: 10 LTFEIQGPEPGAEVRKVELDRTFPAVQDPIVYALKD-QGQH-KVGYVRVREFNSIVTNRLTDALEEMKAGGADEFVLDLRGNGGGAFQSALGIAGLFMENKPITYVVDGSGERAEFKTKTGALVPDA--PLVVWVDGMSASASE 429
+TF I+ G E R V L R F V+DPI Y + + +G KVGYVR+ EFNS+V +L AL ++++ G D +VLD+RGN GGAFQSA+ IAGLF+ + T VVDG+G +F+T ++ A P+VVWVDG SASASE
Sbjct: 279 VTFTIRR---GDEARDVTLKRQFSEVKDPISYRISEIRGDGLKVGYVRIAEFNSLVKIKLEAALNDLESQGVDAYVLDVRGNPGGAFQSAIEIAGLFLSDALATDVVDGNGVDLKFRTSKDNVIIGASDPVVVWVDGRSASASE 419 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20530.5324.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig20530.5324.1 >prot_H-paniculata_contig20530.5324.1 ID=prot_H-paniculata_contig20530.5324.1|Name=mRNA_H-paniculata_contig20530.5324.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=143bp GKTLTFEIQGPEPGAEVRKVELDRTFPAVQDPIVYALKDQGQHKVGYVRVback to top mRNA from alignment at H-paniculata_contig20530:2506..4232- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig20530.5324.1 ID=mRNA_H-paniculata_contig20530.5324.1|Name=mRNA_H-paniculata_contig20530.5324.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1727bp|location=Sequence derived from alignment at H-paniculata_contig20530:2506..4232- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig20530:2506..4232- >mRNA_H-paniculata_contig20530.5324.1 ID=mRNA_H-paniculata_contig20530.5324.1|Name=mRNA_H-paniculata_contig20530.5324.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=858bp|location=Sequence derived from alignment at H-paniculata_contig20530:2506..4232- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |