mRNA_H-paniculata_contig203.5251.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig203.5251.1 vs. uniprot
Match: D8LT20_ECTSI (Predicted unusual protein kinase (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT20_ECTSI) HSP 1 Score: 520 bits (1340), Expect = 7.550e-179 Identity = 274/343 (79.88%), Postives = 306/343 (89.21%), Query Frame = 1
Query: 172 ALIHTANRDYKSLIEDLIALEVLPPDTDRGQVEPVMKRVIGPYVFQGGGAKNLNYQSLAKDLARATLEIPFNIPPYFALVARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSEDGKFLAKRLSVLLSYATGVVAADSSVFVDFDTLPSSAATLGQTLKFLLSEEARPLRSALVGEASNATDLLLRRATRRAVVRAKDLLRPPPPXLPFLPRLPAIPLPLPDSVVDALSPGLTVEEDIFLGSLEELAYALAGVDEGVMQEDPLEALRQLLRPGNDG---AEELSEFLRSLPGDSQKTSALLEVGSEVAQNVVEKGRARVNEFLSGG 1191
ALIHTANRDYKSLIEDL+AL+VLP DTDRGQVEPVMKRVIGPYVF+GGGAK+LNYQSLA+DLARATLEIPFNIPPYFAL+ARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSEDGKFLAKRLSVLLSYATGVVAADS+VFVDFDTLPS+AA+L QTL+FLL+EEARPLR+ALVGEASNA DL+LRR TR+AVVRAKDLLRPPPPX P P+P+SVVDALSP LTVEEDIFL SLEELAYALAG+++G + +DPL +RQLL+ G+DG A EL EF+R+LPGDS+KT A+ +VGSEV QN+ ++ R N LSGG
Sbjct: 3 ALIHTANRDYKSLIEDLVALDVLPADTDRGQVEPVMKRVIGPYVFEGGGAKSLNYQSLARDLARATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSEDGKFLAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLQFLLAEEARPLRAALVGEASNAADLVLRRGTRQAVVRAKDLLRPPPPXXXXXXXXXXXPFPVPESVVDALSPKLTVEEDIFLASLEELAYALAGIEQGTVSDDPLATIRQLLQAGSDGSGGAGELVEFVRTLPGDSEKTEAIFDVGSEVVQNLADRASERFNGLLSGG 345
BLAST of mRNA_H-paniculata_contig203.5251.1 vs. uniprot
Match: A0A6H5KBP7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBP7_9PHAE) HSP 1 Score: 518 bits (1334), Expect = 3.430e-170 Identity = 273/344 (79.36%), Postives = 306/344 (88.95%), Query Frame = 1
Query: 166 VSALIHTANRDYKSLIEDLIALEVLPPDTDRGQVEPVMKRVIGPYVFQGGGAKNLNYQSLAKDLARATLEIPFNIPPYFALVARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSEDGKFLAKRLSVLLSYATGVVAADSSVFVDFDTLPSSAATLGQTLKFLLSEEARPLRSALVGEASNATDLLLRRATRRAVVRAKDLLRPPPPXLPFLPRLPAIPLPLPDSVVDALSPGLTVEEDIFLGSLEELAYALAGVDEGVMQEDPLEALRQLLRPGNDG---AEELSEFLRSLPGDSQKTSALLEVGSEVAQNVVEKGRARVNEFLSG 1188
VSALIHTANRDYKSLIEDL+AL+VLP DTDRGQVEPVMKRVIGPYVF+GGGAK+LNYQSLA+DL RATLEIPFNIPPYFAL+ARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSEDGKFLAKRLSVLLSYATGVVAADS+VFVDFDTLPS+AA+L QTL+FLL+EEARPLR+ALVGEASNA DL+LRR TR+AVVRAKDLLRPPPPX P P+P+SVVDALSP LTVEEDIFL SLEELAYALAG+++G + ++PL +RQLL+ G+DG A EL EF+R+LPGDS+KT A+ +VGSEV QN+ ++ R N LSG
Sbjct: 551 VSALIHTANRDYKSLIEDLVALDVLPADTDRGQVEPVMKRVIGPYVFEGGGAKSLNYQSLARDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSEDGKFLAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLQFLLAEEARPLRAALVGEASNAADLVLRRGTRQAVVRAKDLLRPPPPXXXXXXXXXXXPFPVPESVVDALSPKLTVEEDIFLASLEELAYALAGIEQGTVSDNPLATIRQLLQAGSDGSGGAGELVEFVRTLPGDSEKTEAIFDVGSEVVQNLADRASKRFNGLLSG 894
BLAST of mRNA_H-paniculata_contig203.5251.1 vs. uniprot
Match: A0A835YL56_9STRA (Calcium-activated chloride channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL56_9STRA) HSP 1 Score: 333 bits (855), Expect = 9.110e-96 Identity = 197/365 (53.97%), Postives = 245/365 (67.12%), Query Frame = 1
Query: 154 MWLQVSALIHTANRDYKSLIEDLIALEVLPPDTDRGQVEPVMKRVIGPYVFQGGGAKNLNYQ--------------------------------SLAKDLARATLEIPFNIPPYFALVARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYS---EDGK----FLAKRLSVLLSYATG---VVAADSSVFVDFDTLPSSAATLGQTLKFLLSEEARPLRSALVGEASNATDLLLRRATRRAVVRAKDLLRPPPPXLPFLPRLPAIPLPLPDSVVDALSPGLTVEEDIFLGSLEELAYALAGVDE----GVMQEDPLEALRQLLRPGNDGAEELSEFLRSLPGDSQKTSA 1110
M + V+ALIHTAN+D+ L++DLI L VLPPDTDR +VEP+M+RVI PYVFQGGGAKNLNYQ SLA DL RATLEIPFNIP YFALVARALGILEG+ALTGDPDY+IV+EAYP+VTR+I +DDSP L+RAL+DILYS DG RL+ LL+YA G A VFVDFD++PS+ A L + + FLL + AR LR ALVGE ++ATDL+LR+ TRR + R + LL+PPP LPFLPRLP++PLP+P ++DALSP L++EE++F SL +L AL GVD + P LR+LL N A+EL EF R++ DS + A
Sbjct: 399 MDVMVNALIHTANKDFPRLVDDLIELNVLPPDTDRLKVEPIMRRVIAPYVFQGGGAKNLNYQVCTRAHHGSSAPKXXXXXXXXXXXXXXXXXXXSLAADLGRATLEIPFNIPSYFALVARALGILEGIALTGDPDYKIVLEAYPYVTRRITTDDSPLLRRALQDILYSGSTADGTAAPALSITRLANLLTYAMGNTDAAAGGGPVFVDFDSVPSTGAKLNEVMGFLLGDSARSLRKALVGEIASATDLVLRQTTRRGLSRLEALLQPPP--LPFLPRLPSLPLPVPKRLLDALSPQLSIEEEVFAKSLTDLGLALLGVDADSAAALDNGRPDVLLRKLLSTDNSSAQELLEFARTVQADSPQFDA 761
BLAST of mRNA_H-paniculata_contig203.5251.1 vs. uniprot
Match: A0A2V0PLP2_9CHLO (Protein kinase domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PLP2_9CHLO) HSP 1 Score: 243 bits (619), Expect = 4.630e-66 Identity = 148/350 (42.29%), Postives = 202/350 (57.71%), Query Frame = 1
Query: 166 VSALIHTANRDYKSLIEDLIALEVLPPDTDRGQVEPVMKRVIGPYVFQGGGAKNLNYQSLAKDLARATLEIPFNIPPYFALVARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSEDGKFLAKRLSVLLSYATGVVAADSSVFVDFDTLPSSAATLGQTLKFLLSEEARPLRSALVGEASNATDLLLRRATRRAVVRAKDLLRPPPPXLPFLPRLPAI-PLPLP---------------DSVVDALSPGLTVEEDIFLGSLEELAYALAGVDEGVMQEDPLEALRQLLRPGNDGAEELSEFLRSLPGDSQKTSALLEVGSEVAQNVVEKGRAR 1167
VSA IH ANRD+ +LI+D IALE LP DRG + PVM+RV+GPY+ +GGGA++ N+Q+L++DL TLEIPF++PPY +L+ARA+ LEG+AL GDP Y++V +AYPFV R+++ +DS LR++L+ G+ RLS LL A G VA S FVD D+LP AT + L+F+LS EAR LR LV + DLL+R R+A+ A L PRLP + PLPLP D+ VD +P L +E ++L SL EL + G+ + L L L A EL+ L ++ GD T+A V ++VA V AR
Sbjct: 416 VSATIHLANRDWDALIDDFIALEFLPAGADRGLIIPVMERVLGPYL-RGGGARSFNFQALSQDLLSVTLEIPFSVPPYMSLLARAVATLEGIALLGDPQYQMVAQAYPFVARRVLRNDSSGAGALLREMLFDSQGQLRPARLSALLQAALGYVADKSEGFVDLDSLPEEGATTSEVLRFVLSPEARDLRPLLVSWLATGADLLIRDRARKALAAAPSLA----------PRLPLLGPLPLPXXXXXXXXGLGLVPLDAAVDLFAPPLDAQEGVYLASLLELLAGVLGIPAAQIDSPDLGRLLGLFTNPGAQARELAGALSAVAGDPGSTAAAAGVAADVADAVAATLAAR 754
BLAST of mRNA_H-paniculata_contig203.5251.1 vs. uniprot
Match: A0A8J4G9J4_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4G9J4_9CHLO) HSP 1 Score: 230 bits (586), Expect = 2.240e-64 Identity = 141/326 (43.25%), Postives = 190/326 (58.28%), Query Frame = 1
Query: 166 VSALIHTANRDYKSLIEDLIALEVLPPDTDRGQVEPVMKRVIGPYVFQGGGAKNLNYQSLAKDLARATLEIPFNIPPYFALVARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSED---------GKFLAKRLSVLLSYATGVVAADSSVFVDFDTLPSSAATLGQTLKFLLSEEARPLRSALVGEASNATDLLLRRATRRAVVRAKDLLRPPPPXLPFLPRLPAIPLPLP-------DSVVDALSPGLTVEEDIFLGSLEELAYALAGVDEGVMQEDPLEALRQLLRPGNDGAEELSEFLRSLPGDS 1095
VSA IH ANRD+ +LI+D + L LPPD DR + PVM RV+ PY+ +GGGA N+ +L++DL ATLEIPF++PPY +L+AR++ LEG+AL GDP Y +V +AYPFV RK++ +DS LRD+L D + A+RL+ LL+ A G VA S FVDFD LP+ A++ + FLLS EAR LR LVG DLLLR R+A A L P P L LP P PL LP VD L+P L E ++L L ELA ++ GV+ +++ L+++ QL D EL+ L ++ S
Sbjct: 36 VSATIHLANRDWSALIDDFVELGFLPPDPDRALIIPVMDRVLSPYL-RGGGAAAFNFSALSQDLLAATLEIPFSVPPYMSLLARSVATLEGIALAGDPQYAMVAQAYPFVARKVLRNDSSTASALLRDLLLIRDVATPGTEPGSQLAARRLAALLNAALGYVADSSQGFVDFDALPAEGASVQELATFLLSPEARELRPLLVGWVVGGLDLLLRDRLRKAYSLAAASLTPRLPFLGSLPAPPPPPLYLPGRGLVPMQQAVDLLAPPLEQGEQVYLQQLTELAASVLGVEPALLESPSLQSILQLASSPPDQVRELATVLSNVASSS 360
BLAST of mRNA_H-paniculata_contig203.5251.1 vs. uniprot
Match: A0A836B1N9_9CHLO (Protein kinase domain-containing protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A0A836B1N9_9CHLO) HSP 1 Score: 234 bits (598), Expect = 3.970e-63 Identity = 147/358 (41.06%), Postives = 206/358 (57.54%), Query Frame = 1
Query: 166 VSALIHTANRDYKSLIEDLIALEVLPPDTDRGQVEPVMKRVIGPYVFQGGGAKNLNYQSLAKDLARATLEIPFNIPPYFALVARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSEDG---------------KFLAKRLSVLLSYATGVVAADSSVFVDFDTLPSSAATLGQTLKFLLSEEARPLRSALVGEASNATDLLLRRATRRAVVRAKDLLRPPPPXLPFLPRLPAIPLPLPDSV-------------VDALSPGLTVEEDIFLGSLEELAYALAGVDEGVMQEDPLEALRQLLRPGNDGAEELSEFLRSLPGDSQKTSALLEVGSEVAQNVVEK 1155
V+A IH ANRD+ +LI+D +AL LPP+ DR + PVM RV+ PY+ +GGGA N+Q+L++DL ATLEIPF++PPY +L+AR++ LEG+AL GDP Y +V +AYPFV RK++ +DS + LRD+L D + A+RL+ LL+ A G VA + FVDFD LP A++ + FLLS EAR LR LVG S+ DLLLR R+A A L P LPF+ LPA +P P V V+ L+P L E ++L L ELA ++ GV+ +++ L +L QL +D EL+ L ++ G + + +EVA VV+K
Sbjct: 431 VAATIHLANRDWDALIDDFVALGFLPPNPDRALIIPVMDRVLSPYL-RGGGAAAFNFQALSQDLLAATLEIPFSVPPYMSLLARSVATLEGIALAGDPQYAMVAQAYPFVARKVLRNDSSSASALLRDLLLIRDAAGAGGADGGEAGSRQQLAARRLAALLNAALGYVADSAGGFVDFDALPEEGASVQEIASFLLSPEARELRPLLVGWVSDGLDLLLRDRLRKAYNLASASLTP---RLPFIGSLPAALMPPPPPVWVPGKGLLPVGQAVELLAPPLEPSEQVYLQQLTELAASVLGVEPSALEDPSLNSLLQLASSPSDQVRELANVLGNVAGAGSGKNLM--TATEVAVEVVDK 782
BLAST of mRNA_H-paniculata_contig203.5251.1 vs. uniprot
Match: A0A7S0G2P8_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G2P8_9RHOD) HSP 1 Score: 220 bits (560), Expect = 6.500e-63 Identity = 114/220 (51.82%), Postives = 160/220 (72.73%), Query Frame = 1
Query: 166 VSALIHTANRDYKSLIEDLIALEVLPPDTDRGQVEPVMKRVIGPYVFQGGGAKNLNYQSLAKDLARATLEIPFNIPPYFALVARALGILEGVALTGDPDYRIVMEAYPFVTRKIIS-DDSPALQRALRDILYSEDGKFLAKRLSVLLSYATGVVAADSSVFVDFDTLPSSAATLGQTLKFLLSEEARPLRSALVGEASNATDLLLRRATRRAVVRAKDLL 822
VSA+IH AN+D+ L++DLI L+ LP D DR +VE VM +V+GP+V+QGGGAKN++++SLA+DLA T EIPF+IPPY+ALV RA+ LEG+AL +PDYR+VMEAYP+V R+++S DD+P LQRAL +ILY +DG F RL+ LL+ A G V VDFD++P AT + L+F+LS +++ +R L E + A D++LRR R +R ++L
Sbjct: 33 VSAVIHVANKDFGQLVDDLIDLKFLPNDVDRPKVEIVMGKVLGPFVYQGGGAKNVDFRSLARDLAGVTREIPFSIPPYYALVGRAIISLEGIALQANPDYRLVMEAYPYVARRVMSEDDTPELQRALAEILY-KDGGFSVNRLAALLNSAMGYVGMSKDAIVDFDSIPEDGATASKFLEFVLSSQSKSIRGTLSVELAKAIDIVLRRMVR---LRTSEIL 248
BLAST of mRNA_H-paniculata_contig203.5251.1 vs. uniprot
Match: A0A250XDH8_9CHLO (Protein kinase domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XDH8_9CHLO) HSP 1 Score: 233 bits (594), Expect = 8.380e-63 Identity = 138/301 (45.85%), Postives = 188/301 (62.46%), Query Frame = 1
Query: 166 VSALIHTANRDYKSLIEDLIALEVLPPDTDRGQVEPVMKRVIGPYVFQGGGAKNLNYQSLAKDLARATLEIPFNIPPYFALVARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSEDGKFLAKRLSVLLSYATGVVAADSSVFVDFDTLPSSAATLGQTLKFLLSEEARPLRSALVGEASNATDLLLRRATRRAVVRAKDLLRPPPPXLPFLPRLPAIPLP-----------LPDSVVDALSPGLTVEEDIFLGSLEELAYALAGVDEGVMQEDPLEALRQLLR 1035
VSA IH ANRD+ SLI D I L LP D +R + PVM RV+GPY+ +GGGAK N+ +L++DL TLEIPF++PPY +L+AR++ LEG+AL GDPDY++V +AYPFV RKI+ +DS LRDILY +GK R+S LL+ A G V++ S FVDFD++P AT+ + L+FLLS EA+ LR LV + + DLLLR R+ L P LPF +P PLP +P+++ D L+P L EE +FL SL EL+ +L G+ ++ + + QLLR
Sbjct: 433 VSATIHLANRDWDSLIGDFIELGFLPRDCNRAVITPVMDRVLGPYL-RGGGAKAFNFSALSQDLLSVTLEIPFSVPPYMSLLARSVATLEGIALAGDPDYQMVTQAYPFVVRKILRNDSTGTGGLLRDILYDNEGKVKPTRMSALLNAALGYVSSKSEGFVDFDSIPDEGATVQEVLQFLLSPEAKDLRPLLVSQLVSGLDLLLRDRVRKLYNVTLPALVP---RLPFFGAIPTPPLPPLLVPGLGFMPVPEAL-DLLAPPLAPEEGVFLNSLTELSASLTGLSLSDFEDPEPQRVIQLLR 728
BLAST of mRNA_H-paniculata_contig203.5251.1 vs. uniprot
Match: A0A8J4CF83_9CHLO (Protein kinase domain-containing protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CF83_9CHLO) HSP 1 Score: 230 bits (586), Expect = 9.860e-63 Identity = 141/326 (43.25%), Postives = 190/326 (58.28%), Query Frame = 1
Query: 166 VSALIHTANRDYKSLIEDLIALEVLPPDTDRGQVEPVMKRVIGPYVFQGGGAKNLNYQSLAKDLARATLEIPFNIPPYFALVARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSED---------GKFLAKRLSVLLSYATGVVAADSSVFVDFDTLPSSAATLGQTLKFLLSEEARPLRSALVGEASNATDLLLRRATRRAVVRAKDLLRPPPPXLPFLPRLPAIPLPLP-------DSVVDALSPGLTVEEDIFLGSLEELAYALAGVDEGVMQEDPLEALRQLLRPGNDGAEELSEFLRSLPGDS 1095
VSA IH ANRD+ +LI+D + L LPPD DR + PVM RV+ PY+ +GGGA N+ +L++DL ATLEIPF++PPY +L+AR++ LEG+AL GDP Y +V +AYPFV RK++ +DS LRD+L D + A+RL+ LL+ A G VA S FVDFD LP+ A++ + FLLS EAR LR LVG DLLLR R+A A L P P L LP P PL LP VD L+P L E ++L L ELA ++ GV+ +++ L+++ QL D EL+ L ++ S
Sbjct: 218 VSATIHLANRDWSALIDDFVELGFLPPDPDRALIIPVMDRVLSPYL-RGGGAAAFNFSALSQDLLAATLEIPFSVPPYMSLLARSVATLEGIALAGDPQYAMVAQAYPFVARKVLRNDSSTASALLRDLLLIRDVATPGTEPGSQLAARRLAALLNAALGYVADSSQGFVDFDALPAEGASVQELATFLLSPEARELRPLLVGWVVGGLDLLLRDRLRKAYSLAAASLTPRLPFLGSLPAPPPPPLYLPGRGLVPMQQAVDLLAPPLEQGEQVYLQQLTELAASVLGVEPALLESPSLQSILQLASSPPDQVRELATVLSNVASSS 542
BLAST of mRNA_H-paniculata_contig203.5251.1 vs. uniprot
Match: A0A383VLQ5_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VLQ5_TETOB) HSP 1 Score: 233 bits (595), Expect = 1.690e-62 Identity = 144/350 (41.14%), Postives = 203/350 (58.00%), Query Frame = 1
Query: 166 VSALIHTANRDYKSLIEDLIALEVLPPDTDRGQVEPVMKRVIGPYVFQGGGAKNLNYQSLAKDLARATLEIPFNIPPYFALVARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSEDGKFLAKRLSVLLSYATGVVAADSSVFVDFDTLPSSAATLGQTLKFLLSEEARPLRSALVGEASNATDLLLRRATRRAVVRAKDLLRPPPPX-----LP----------FLPRLPAIPLPLPDSVVDALSPGLTVEEDIFLGSLEELAYALAGVDEGVMQEDPLEALRQLLRPGNDGAEELSEFL-RSLPGDSQKTSALLEVGSEVAQNVVEKGRAR 1167
VSA IH ANR++ +L++D I LE LP D +R + PVM+RV+GPY+ +GGGAK N+Q+L++DL T+EIPF++PPY +L+AR++ LEG+ALT DP Y++V +AYPFV RK++ DD LRD++Y E GK RLS LL A G V+ FVDFD +P+ A+ G+ L F+LS EAR LR LVG + A DL++R R+A LL P P LP FLP L +PLP V+ L+P L+ +E I+ SL EL + V ++ + L +L+ + A+EL + L + GD+ +A +V V V AR
Sbjct: 477 VSATIHLANRNWAALVDDFIDLEFLPTDANRAVIIPVMERVLGPYL-RGGGAKAFNFQALSQDLLTTTMEIPFSVPPYMSLLARSVATLEGIALTADPGYQMVAQAYPFVARKVLRDDGSGTAALLRDLVYDEQGKLRPGRLSALLQAALGYVSEQGEGFVDFDAVPAEGASAGEVLAFVLSPEARELRPLLVGWLAGAADLVIRDRARKAAAALPGLLTPRLPFAALLGLPSLXXXXXXXVFLPGLGLLPLP---EAVERLAPPLSDQEVIYYQSLLELVAGILDVPPAQLESPGFDTLARLITQPGEQAKELQQALVAATNGDAGTAAAAADVAVAVVDEVARGLAAR 822 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig203.5251.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig203.5251.1 >prot_H-paniculata_contig203.5251.1 ID=prot_H-paniculata_contig203.5251.1|Name=mRNA_H-paniculata_contig203.5251.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=407bp MAQSIRGVVNRVFRTVVCSLAYRLCPPAEILIMWLQVSALIHTANRDYKSback to top mRNA from alignment at H-paniculata_contig203:31785..41302- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig203.5251.1 ID=mRNA_H-paniculata_contig203.5251.1|Name=mRNA_H-paniculata_contig203.5251.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9518bp|location=Sequence derived from alignment at H-paniculata_contig203:31785..41302- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig203:31785..41302- >mRNA_H-paniculata_contig203.5251.1 ID=mRNA_H-paniculata_contig203.5251.1|Name=mRNA_H-paniculata_contig203.5251.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2442bp|location=Sequence derived from alignment at H-paniculata_contig203:31785..41302- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |