|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1073 |
| Cds size | 1071 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig203.5248.1 >prot_H-paniculata_contig203.5248.1 ID=prot_H-paniculata_contig203.5248.1|Name=mRNA_H-paniculata_contig203.5248.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=357bp
ATELLERARADAERARQDLEKLERCATEAADEADKKLREALEKKKVEAEA
ALEELRRRRDDEVGRLREEARVCRAEAEALRERLEQRGKEVGVLGEQLEG
RKREADFLQEQLKGRQREVDVLREQLEDRRRETEKRDEEVRQIGTDLEGR
RNEVDALRKQLEQQRSEAEWGGKEAEELRSLLKVRDGAIAEEAQQRAKRE
ALEKTRQSEEKRERERERKLQEQLESQHKSEMDTVQDELGRLQQERTSEV
EQLRATLDLLESEAGDIRGNLEKERIDFAEKLRKAQDFHADDTAFIREEF
ERQMAEAKATAEAKLQHAMELRKNEVTTAGKHLRALGRQVHQLENAKTAW
EEERKEV back to topmRNA from alignment at H-paniculata_contig203:3342..5628+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig203.5248.1 ID=mRNA_H-paniculata_contig203.5248.1|Name=mRNA_H-paniculata_contig203.5248.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2287bp|location=Sequence derived from alignment at H-paniculata_contig203:3342..5628+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCTACGGAACTCCTGGAGAGGGCACGGGCGGACGCCGAACGCGCGCGGCA
AGACTTGGAGAAGTTGGAGAGGTGTGCTACGGAGGCCGCCGACGAAGCAG
ACAAAAAGCTGAGAGAAGCGTTAGAGAAGAAGAAGGTGGAGGCGGAGGCC
GCGCTAGAAGAGCTGCGGCGGCGGCGGGACGATGAGGTAGGGAGGCTACG
GGAAGAGGCACGGGTTTGCCGTGCTGAGGCGGAGGCGTTGCGAGAACGAC
TGGAGCAGAGGGGTAAAGAGGTTGGCGTTTTAGGGGAGCAGCTGGAAGGG
CGGAAAAGAGAAGCCGACTTTCTACAGGAGCAGCTGAAAGGGCGGCAAAG
AGAGGTCGATGTTTTGCGGGAACAACTGGAAGATCGGCGTAGAGAGACGG
AAAAGCGGGACGAAGAGGTAAGACAGATTGGAACAGACCTGGAAGGGCGG
AGGAATGAGGTCGATGCCCTGCGAAAACAGCTGGAGCAGCAGCGAAGTGA
AGCAGAATGGGGGGGGAAAGAGGCGGAGGAGCTCCGATCCTTGCTAAAGG
TACGCGACGGGGCGATCGCGGAGGAGGCACAGCAGCGAGCGAAGCGGGAA
GCACTTGAAAAAACGAGGCAAAGCGAGGAGAAGCGGGAGCGGGAGCGGGA
GCGGAAGCTTCAAGAGCAGCTAGAGTCGCAACACAAATCCGAGATGGACA
CCGTGCAGGACGAGTTAGGACGGTTGCAGCAGGAGCGGACGAGCGAGGTC
GAGCAGCTCCGAGCGACGCTGGATTTGCTGGAGTCCGAGGCGGGCGATAT
ACGAGGAAACTTGGAAAAGGAGAGAATCGACTTTGCGGAGAAATTGAGGA
AAGCGCAGGATTTCCATGCGGACGATACGGCATTCATTCGCGAGGAGTTT
GAGCGACAGATGGCGGAGGCAAAAGCTACGGCGGAGGCCAAGCTCCAGCA
TGCCATGGAGTTAAGGAAGAACGAGGTTACGACTGCTGGAAAGCACCTCA
GGGCGCTCGGAAGGTATTAAATAGTACTGTAGGGAAATTTAAGGAATAAT
TTATTGTGCCGTCGTGGAACCTCTAGTCAGATGGCATAAATCAATTCCTC
ACCACAGAGCTAAATTGGCTTGTAATCGTTGTAGTATGTATGTCAAAGCA
CTCACAGCTAAGCCCAATCATGGCAATGGAGTGACCACAACCGCTATTTA
GGAATCTATAAATGCGTGCGAGTGCCGTTGGCCACTTATAATTACGTTTC
AGTCGTCTCTAGTGCTGAAAAGTGAAAGGAAAACAGTTGTTTTTCGATGG
AGTGAAAAATTCCCGAATAATGGCCTTAGATTATAAGTTCTGTGACAGCA
CGAACTGGCAACCACCTACACACGAATTTAGAACAGTGAATGAGAAAGAA
GATTTTGGCTGATCGTCGGAATCCTTAATATATTGTTGTCCTTATTCAGT
ACGGTAAGGTGGTCGCCCTCGTCGATGTCGGTTAGAAACAGTTCTTTTTC
AACTTTGTACTCAAGTAACTCCTGGAAAATAGTCTTTATACGAACGTAGC
GAGCCACTGCAAGAGCAGCGAGCCCATGGGTTGAGGATACGCACGAACCG
TGCAGGCGTAGCCTTGGCTCTACTTCTAGTAGTGTAAGAATATTGAGTAT
TGCGGTTGAGGTTTTTTACCTGTAATCCTCAACCAAAGAGGGTCAGGGAT
ACTGCAGAAAAAAATAACTACAGACTGTATCCATTGTAATGTTTATACAT
TCTGGTGGGTTTGCGGTTGGCCATTTTTGTTTGTGCAACTGGTCGTTTTG
CACATTTCTGGATAATGTATTTTTTGCCATGTTTTGTCAATTACTAAGGC
GACTCATGCTTTGTTCCTTATGTTTTTGTTTTGTTCTAAAGGTCATCACT
ATTAAGTATTCACATGATAATAAATAATCCATTTTGGTCTTGCTTTATTC
CATGCTCCCGGCTGATAATGTTTTGTTTCTTTTCGCTAGGGGTCCGCGGG
AGTATGCCCGAAACAGGTAACGCAACACAGCCGACAGACTTCCGTCAATC
TCAATCAAGTAATCACTGTGGGCGCATCTCAAAACATATCTCGATGTTAG
AAAGAGCACACTTCACCAAACCAATCCATTGCATTGTTTTGGATGGACCT
CTGAACATATCTTGATGTTGGGAAAACCAAGTGATCCTCACTTTGTAGCC
AAAACGATGTCGGGGGGCGGACGGGGCAGGCAAGTGCACCAGCTGGAGAA
TGCCAAGACGGCGTGGGAGGAAGAGCGTAAGGAAGTC back to topCoding sequence (CDS) from alignment at H-paniculata_contig203:3342..5628+ >mRNA_H-paniculata_contig203.5248.1 ID=mRNA_H-paniculata_contig203.5248.1|Name=mRNA_H-paniculata_contig203.5248.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2142bp|location=Sequence derived from alignment at H-paniculata_contig203:3342..5628+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCTACGGAACTCCTGGAGAGGGCACGGGCGGACGCCGAACGCGCGCGGCA
AGACTTGGAGAAGTTGGAGAGGTGTGCTACGGAGGCCGCCGACGAAGCAG
ACAAAAAGCTGAGAGAAGCGTTAGAGAAGAAGAAGGTGGAGGCGGAGGCC
GCGCTAGAAGAGCTGCGGCGGCGGCGGGACGATGAGGTAGGGAGGCTACG
GGAAGAGGCACGGGTTTGCCGTGCTGAGGCGGAGGCGTTGCGAGAACGAC
TGGAGCAGAGGGGTAAAGAGGTTGGCGTTTTAGGGGAGCAGCTGGAAGGG
CGGAAAAGAGAAGCCGACTTTCTACAGGAGCAGCTGAAAGGGCGGCAAAG
AGAGGTCGATGTTTTGCGGGAACAACTGGAAGATCGGCGTAGAGAGACGG
AAAAGCGGGACGAAGAGGTAAGACAGATTGGAACAGACCTGGAAGGGCGG
AGGAATGAGGTCGATGCCCTGCGAAAACAGCTGGAGCAGCAGCGAAGTGA
AGCAGAATGGGGGGGGAAAGAGGCGGAGGAGCTCCGATCCTTGCTAAAGG
TACGCGACGGGGCGATCGCGGAGGAGGCACAGCAGCGAGCGAAGCGGGAA
GCACTTGAAAAAACGAGGCAAAGCGAGGAGAAGCGGGAGCGGGAGCGGGA
GCGGAAGCTTCAAGAGCAGCTAGAGTCGCAACACAAATCCGAGATGGACA
CCGTGCAGGACGAGTTAGGACGGTTGCAGCAGGAGCGGACGAGCGAGGTC
GAGCAGCTCCGAGCGACGCTGGATTTGCTGGAGTCCGAGGCGGGCGATAT
ACGAGGAAACTTGGAAAAGGAGAGAATCGACTTTGCGGAGAAATTGAGGA
AAGCGCAGGATTTCCATGCGGACGATACGGCATTCATTCGCGAGGAGTTT
GAGCGACAGATGGCGGAGGCAAAAGCTACGGCGGAGGCCAAGCTCCAGCA
TGCCATGGAGTTAAGGAAGAACGAGGTTACGACTGCTGGAAAGCACCTCA
GGGCGCTCGGAAGGCTACGGAACTCCTGGAGAGGGCACGGGCGGACGCCG
AACGCGCGCGGCAAGACTTGGAGAAGTTGGAGAGGTGTGCTACGGAGGCC
GCCGACGAAGCAGACAAAAAGCTGAGAGAAGCGTTAGAGAAGAAGAAGGT
GGAGGCGGAGGCCGCGCTAGAAGAGCTGCGGCGGCGGCGGGACGATGAGG
TAGGGAGGCTACGGGAAGAGGCACGGGTTTGCCGTGCTGAGGCGGAGGCG
TTGCGAGAACGACTGGAGCAGAGGGGTAAAGAGGTTGGCGTTTTAGGGGA
GCAGCTGGAAGGGCGGAAAAGAGAAGCCGACTTTCTACAGGAGCAGCTGA
AAGGGCGGCAAAGAGAGGTCGATGTTTTGCGGGAACAACTGGAAGATCGG
CGTAGAGAGACGGAAAAGCGGGACGAAGAGGTAAGACAGATTGGAACAGA
CCTGGAAGGGCGGAGGAATGAGGTCGATGCCCTGCGAAAACAGCTGGAGC
AGCAGCGAAGTGAAGCAGAATGGGGGGGGAAAGAGGCGGAGGAGCTCCGA
TCCTTGCTAAAGGTACGCGACGGGGCGATCGCGGAGGAGGCACAGCAGCG
AGCGAAGCGGGAAGCACTTGAAAAAACGAGGCAAAGCGAGGAGAAGCGGG
AGCGGGAGCGGGAGCGGAAGCTTCAAGAGCAGCTAGAGTCGCAACACAAA
TCCGAGATGGACACCGTGCAGGACGAGTTAGGACGGTTGCAGCAGGAGCG
GACGAGCGAGGTCGAGCAGCTCCGAGCGACGCTGGATTTGCTGGAGTCCG
AGGCGGGCGATATACGAGGAAACTTGGAAAAGGAGAGAATCGACTTTGCG
GAGAAATTGAGGAAAGCGCAGGATTTCCATGCGGACGATACGGCATTCAT
TCGCGAGGAGTTTGAGCGACAGATGGCGGAGGCAAAAGCTACGGCGGAGG
CCAAGCTCCAGCATGCCATGGAGTTAAGGAAGAACGAGGTTACGACTGCT
GGAAAGCACCTCAGGGCGCTCGGAAGGCAAGTGCACCAGCTGGAGAATGC
CAAGACGGCGTGGGAGGAAGAGCGTAAGGAAGTCGCAAGTGCACCAGCTG
GAGAATGCCAAGACGGCGTGGGAGGAAGAGCGTAAGGAAGTC back to top
|