mRNA_H-paniculata_contig2027.5241.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2027.5241.1 vs. uniprot
Match: A0A6H5J7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7Y8_9PHAE) HSP 1 Score: 542 bits (1397), Expect = 3.850e-172 Identity = 440/1119 (39.32%), Postives = 545/1119 (48.70%), Query Frame = 1
Query: 388 QRCRKHRRRPRSMLEARSPHVTELEDDAPARMDVVMYVRLLSRRWLETHIWHAKRMHMREAWGFMLPTRRSNLGPRAATEAVLKHCTLQDVTFLRPLEIRGPISCLLGVLSTITDPLDCRHKDWVCVQGFVEAPTHVHRVNEFPLGCIAPATVMWSPALDNEMSHGYD--EGDHRLK------------------------------EGGLEEDEDLQRVWLWVHPAGAKEALREIRKACLLEGAPWVGMVEAGPLVGGLCRLRVRGRRAHEIVQQVVRTTAGNTSITPTSGNTSTPAAADNNDKRSPRSVKHNPDEGNGQAVTDKIRTEVEGSCNNRDTRGGRIGVAAGQEDGDLALSERAAVSHGSRNAAVGFERAAQDNARRWRLLATSSAPAVGGGGKFSL-----NALADGSILALTALDPRELSRGGDSAVTDLIGGXXXXXXXXXXXHGGVQNKTLDTPKNSIAGXXXXXXXXXXXDGADGRRGSASSDVQPSPPTLPTPWPFAAVSPLWDADARGLSAKLAGARPDHALNERRRREKSRATWDSADLSSVPVAVNSADGKGS----GGGGGMRSAVQGRRRFPIGETPVFLIRSSGTRTGAH-RAAGSAELQSDFSGXXXXXXXXXXX---VEKKRRLVGEGWDIVVSAGWASVFFHALVMAGARAISLADADALAVETRLSRFPADFPDTTAGREYWDEIGAESLSKWQRTRPKHRGFKLPPLGLLPTPQAAPVEPPRRPTPLMKKDRDEEGRAPVPQ---AVDTPEVLPXXXXXXXXXXXXXXXXXXPKALQNEFLSL--FRPDFSALALGGGQGPLDHDNAAARRGD---SDGELDIDRRGLARDLMQDGGGDDQVGAVGVVAVGDREPFAVARGFHYFQAFLPT-----------EETGPMAGGGD-------SFCLPPLRLAMPTMVNVKLTLLKGVPHAGALIYAASPRHISAWEAGQQGDYNNSHIHHISKPWPGIQ-----VAADGRGSPESAPLSPPVPPAIGAVTSGGFSFLCGIGVGRGVCEAVAVRDALAVS----PARRGIGDFMGSKGRDSRGCRKQSKSSATGKKHDRRWALVLVGSRSGGGGNTVAWLRPCVMSV 3504
QRCRKHRRRPRS+LE SPH ++++ + + + RWLETHIWHAKRMHM+ AWGF+LP SN GPRAA EA LKHCTLQD+TF+RPLE+RGP C+LG LS +TDPLD R K CV GFVEA TH++R NEFPLGC+AP TV+W+P+ ++ D + DH +G E++ED++RVW WVHPA AKEALREIRKAC LEG+PW G V+AGP+ GGLCRLRVRG R+HE VQ+V+RT A T+ N + PAAA A V +E AA++NA WR L S PA G + GS+LA+TALDPR+ + G GG ++ +S XXXXXXXXXXX A++ V+ PP AA+SPLWD DAR L A RPDH +NE RRRE++R +W S + A N G + G GGG TPV L+ +SG T AH ++A S FSG XXXXXX E+KR+ + GWDIV+S GWA V F ALVMAGARAISL DAD L +E RFP DFPDT +GR +WDE+G ++ W+RTR KHRGFK P A P P R P + + E A V A E A + L L FRPDF +LA G G P +A GD DG D +A + +REP+AVARGF Y +AFLP EE GG LRLA+PT++ + + L KGVP AGA ++AASPRH + W G++ KPWPG+ +AA G + + + AIGAVTSGGFS+L G+GVGRGVCEA+ VRDAL S RRG G G G +R +Q R WALVLVG+ +G W RP V V
Sbjct: 6 QRCRKHRRRPRSLLEIHSPHAVR-DEESGGESEAG---KGCTPRWLETHIWHAKRMHMKHAWGFVLPA-ESNRGPRAAVEAALKHCTLQDLTFMRPLELRGPRWCILGALSAVTDPLDSRPKQQSCVDGFVEARTHLYRANEFPLGCVAPVTVLWAPSDSAASANNEDARKNDHDADGNNGTSAPEXXXXXXXXXXXXXXXXXGGAPDGLEEQEEDVRRVWAWVHPAAAKEALREIRKACDLEGSPWQGCVQAGPVPGGLCRLRVRGTRSHETVQRVLRTAAA------TAANVA-PAAA----------------------------------------------------------------------AGVDYEGAARENAGHWRALGAS--PAKSGXXXXXXXXGVPREIPSGSVLAITALDPRQQRKNGS-----------VRSRGQRPESGGSRDSEGVASSSSAXXXXXXXXXXXXXXXP----AVAAAAVEQWPPRS------AAISPLWDPDARAL----ADPRPDHVINEHRRRERARKSWHSGQST---AAANKDTGPPAEEYVGDGGG---------------TPVILVSASGVPTTAHGQSAAPTARTSLFSGDRGSGXXXXXXXKGAERKRQALAAGWDIVLSPGWAPVIFGALVMAGARAISLEDADGLMLEAGEPRFPTDFPDTASGRRHWDEVGLQAEEAWKRTRSKHRGFKRP---------ALPPPPEARSLPPRQSECGEGVTATVGDGSGATGGSEETAEKAAGDEGQQEEGQQQRQNLAPKQSSLPLRWFRPDFRSLA-GAGDAPSTRAESAESNGDIGDGDGSAAADASVVAWKSQE-----------------EREPYAVARGFQYVRAFLPDVEEEHRETDACEEDDDADGGNPLSXXXXXXXXXXXLRLALPTVLELVIVLDKGVPKAGAPLHAASPRHHALWMQGRRN----------GKPWPGLPAKDTLLAAVGSPCGDVSATA-----AIGAVTSGGFSYLRGVGVGRGVCEAITVRDALLASLFSCRQRRGSG---GGGGVGTRQWGQQ-----------RAWALVLVGNEAGD------WFRPAVAFV 935
BLAST of mRNA_H-paniculata_contig2027.5241.1 vs. uniprot
Match: D7FNE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE0_ECTSI) HSP 1 Score: 538 bits (1385), Expect = 3.320e-170 Identity = 429/1134 (37.83%), Postives = 527/1134 (46.47%), Query Frame = 1
Query: 388 QRCRKHRRRPRSMLEARSPHVTELEDDAPARMDVVMYVRLLSRRWLETHIWHAKRMHMREAWGFMLPTRRSNLGPRAATEAVLKHCTLQDVTFLRPLEIRGPISCLLGVLSTITDPLDCRHKDWVCVQGFVEAPTHVHRVNEFPLGCIAPATVMWSP-----------ALDNEM-------------------------SHGYDEGDHRLKEGGLEE-DEDLQRVWLWVHPAGAKEALREIRKACLLEGAPWVGMVEAGPLVGGLCRLRVRGRRAHEIVQQVVRTTAGNTSITPTSGNTSTPAAADNNDKRSPRSVKHNPDEGNGQAVTDKIRTEVEGSCNNRDTRGGRIGVAAGQEDGDLALSERAAVSHGSRNAAVGFERAAQDNARRWRLLATSSAPAVGGGGKFSLNA----LADGSILALTALDPRELSRGGDSAVTDLIGGXXXXXXXXXXXHGGVQNKTLDTPKNSIAGXXXXXXXXXXXDGA-DGRRGSASSDVQPSPPTLPTPWP--FAAVSPLWDADARGLSAKLAGARPDHALNERRRREKSRATWDSADLSSVPVAVNSADGKGSGGGGGMRSAVQGRRRFPIGE--------TPVFLIRSSGTRTGAHRAAGS----AELQSDFSGXXXXXXXXXXXVEKKRRLVGEGWDIVVSAGWASVFFHALVMAGARAISLADADALAVETRLSRFPADFPDTTAGREYWDEIGAESLSKWQRTRPKHRGFKLPPLGLLPTPQAAPVEPPRRPTPLMKKDRDEEGRAPVPQAVDTP------EVLPXXXXXXXXXXXXXXXXXXPKALQNEFLSLFRPDFSALALGGGQGPLDHDNAAARRGDSDGELDIDRRGLARDLMQDGGGDDQVGAVGVVAVGDREPFAVARGFHYFQAFLPTEET-------------------------GPMAGGGDSFCLPPLRLAMPTMVNVKLTLLKGVPHAGALIYAASPRHISAWEAGQQGDYNNSHIHHISKPWPGIQVAADGRGSPESAPLSP-PVPPAIGAVTSGGFSFLCGIGVGRGVCEAVAVRDALAVSPARRGIGDFMGSKGRDSRGCRKQSKSSATGKKHDRRW-------ALVLVGSRSGGGGNTVAWLRPCVMSV 3504
QRCRKHRRRPR++LE SPH + D+ D R RWLETHIWHAKRMHM+ AWGF+LP SN GPRAA EA LKHCTLQD+TF+RPLE+RGP C+LG LS +TDPLD R K CV GFVEA TH++R NEFPLGC+AP TV+W+P A N+ + G +EG GLEE ED++RVW+WVHPA AKEALREIRKAC LEG+PW G V+AGP+ GGLCRLRVRG R+HE VQ+V++T A ++ P AAG + +E AA++NA WR L S A + G G + N + GS+LA+TALDPR+ + G + G ++ D+ +S XXXXXXX GA WP AAVSPLWD DAR L+A RPDH +NE RRRE++R +W G +S G+ P GE TPV L+ +SG T AH + A L S G XXXXXXX E+KR+ + GWDIV+S GWA VFF ALVMAGARAISL AD L +E RFPADFP T +GR +WD++G ++ W+R RPKHRGFK P LP P AP PP + E G+ A D E + P +L L FRPDF +LA GG S G DR G D DG V +RE +AVARGF Y +AFLP E L+LA+PT++ + + L KGVP AGA ++AASP+H + W G++ KPWPG+ A D + +P AIGAVTSGG S+L G+GVGRGVCEAV VRDAL S CR+Q S R+W ALVLVG+ +G W RP V V
Sbjct: 6 QRCRKHRRRPRALLEMHSPHA--VRDEESGGEDEAGKGR--KPRWLETHIWHAKRMHMKHAWGFVLPA-ESNRGPRAAVEAALKHCTLQDLTFMRPLELRGPRWCILGALSAVTDPLDSRPKQQSCVDGFVEAHTHLYRTNEFPLGCVAPVTVLWAPSDSAATANDEDARTNDRDTDGKNGTSAPEAGGDXXXXXXXRATEGREEGGTGGTPDGLEERQEDVRRVWVWVHPAAAKEALREIRKACDLEGSPWQGCVQAGPVPGGLCRLRVRGARSHETVQRVLQTAAATAALAP----------------------------------------------------------AAGDD----------------------YEGAARENAGHWRALGASPAKSDGRGNNNNNNGVPREIPSGSVLAITALDPRQQPKNGSVRSS---------------CQGPESGRSRDSVASSXXXXXXXXXXSRDSKGAASAXXXXXXXXXXXXXXXXXEQWPPRLAAVSPLWDPDARALAAP----RPDHVINEHRRRERARESWH-----------------------GEKSTAAGKDTGPPGEECVGRSGGTPVILVSASGVPTTAHGQPAAPTTRASLFSGDRGSGXXXXXXXKEAERKRQALAAGWDIVLSPGWAPVFFGALVMAGARAISLEGADGLMLEAGEPRFPADFPGTASGRRHWDDVGRQAEEAWKRARPKHRGFKRP---ALPPPPEAPSLPP---------PQSERGKGVTATAGDRSGATAGSEEMAEKAAGEEGHQRRQNLAPKPSSLP---LRWFRPDFRSLAGAGGT-------------PSTGAESTDRNGDVGD--GDGSAAADASVVAWRPQEEREAYAVARGFQYVRAFLPDVEEEHRETDVCDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQLALPTVLELVIVLDKGVPKAGAPLHAASPKHHALWMQGRRN----------GKPWPGLS-AKDALLAAVGSPCGDLSATAAIGAVTSGGVSYLRGVGVGRGVCEAVTVRDALLASLFS----------------CRQQRGSXXXXXXXTRQWGQQRRVWALVLVGNEAGD------WFRPAVAFV 949
BLAST of mRNA_H-paniculata_contig2027.5241.1 vs. uniprot
Match: UPI0014550F01 (ribonucleases P/MRP protein subunit POP1-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014550F01) HSP 1 Score: 139 bits (351), Expect = 7.370e-30 Identity = 118/402 (29.35%), Postives = 183/402 (45.52%), Query Frame = 1
Query: 58 PQALDVEHFAQARVQELEFLDIAVAAVTAHENGGDAGSRAGLDVQSQALPRHMRRRAASHKPRRMPVALK-------NRG--RGGGRGXRGQGRDIGPASSRGVSTASAAANNNAAQSEQRCRKHRRRPRSMLEARSPHVTELEDDAPARMDVVMYVRLLSRRWLETHIWHAKRMHMREAWGFMLPTRRSNLGPRAATEAVLKHCTLQDVTFLRPLEIRGPISCLLGVLSTITDP---LDCRHKDWVCVQGFVEAPTHVHRVNEFPLGCIAPATVMW-------SPALDNEMSHGYDEGDHRLKEGGLEEDEDLQRVWLWVHPAGAKEALREIRKACLLEG--------APWVGMVEAGPLVGGLCRLRVRGRRAHEIVQQVVRTTAGNTSITPTSGNTSTP 1182
P+A++V FA AR EL+ + AV + G+ Q LPRH+RRRA SH RR+P L+ N+G + GRG G G PA +R R+HRRRP + L D+ R S WLETHIWHAKR M E WG LP S+ RA A++KHC +QD+++++ +E+ G L LS +T P L C ++ G T +++ ++FP G + P +W S + E + EG +++ ED ++++W+W HPA + ++E++ AC E + V ++E PL R R++G H ++ ++ +TS TP S +++ P
Sbjct: 19 PRAINVAEFAGARAAELKTMTEAVMMM------------GGMRRTFQKLPRHLRRRAMSHDLRRLPKRLRESEERAMNKGANKKTGRGKEGDGETSAPA--------------------KRSRRHRRRP-----------SNLRDEYQRRQR--------SNTWLETHIWHAKRFKMAELWGHRLPLHPSDKSVRATYRALVKHCLIQDISYMKVIEVSGQQGHTLKALSHLTSPSTGLTCAAASYL--SGQRHGDTVLYKYDQFPEGALGPVNFLWRAEGGFKSSSKPEETTTVDQEGMLSVRKANKLEDSSVRQLWVWAHPACTEVLVKELQTACENENKNADDKCNSITVKLLEDSPL-----RFRLQGPLCHPVLLDTLK--IADTSGTPDSTSSNQP 360
BLAST of mRNA_H-paniculata_contig2027.5241.1 vs. uniprot
Match: A0A8B7Y7J8_ACAPL (ribonucleases P/MRP protein subunit POP1-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Y7J8_ACAPL) HSP 1 Score: 137 bits (345), Expect = 4.140e-29 Identity = 115/382 (30.10%), Postives = 167/382 (43.72%), Query Frame = 1
Query: 58 PQALDVEHFAQARVQELEFLDIAVAAVTAHENGGDAGSRAGLDVQSQALPRHMRRRAASHKPRRMPVALKN----------RGRGGGRGXRGQGR-DIGPASSRGVSTASAAANNNAAQSEQRCRKHRRRPRSMLEARSPHVTELEDDAPARMDVVMYVRLLSRRWLETHIWHAKRMHMREAWGFMLPTRRSNLGPRAATEAVLKHCTLQDVTFLRPLEIRGPISCLLGVLSTITDP---LDCRHKDWVCVQGFVEAPTHVHRVNEFPLGCIAPATVMWS---------PALDNEMSHGYDEGDHRLKEGGLEEDEDLQRVWLWVHPAGAKEALREIRKACLLEGAPWVG--MVEAGPLVGGLCRLRVRGRRAHEIVQQVVR 1128
P+A++V FA AR EL+ + AV + G+ Q LPRH+RRRA SH RR+P L++ + G+G G D+ PA +R R+HRRRP + L+ + R WLETHIWHAKR M WG+ LP S+ RA A+ +HC LQDV++LR +E+ GP L LS +T P L C ++ Q EA +R ++FP G I P +W P E G + G GG E++ ++++WLW HP+ A E L+E++ A E A V L R R++G +H ++ ++
Sbjct: 19 PRAINVAEFAGARAAELKTMTEAVMTM------------GGMRRTFQKLPRHLRRRAMSHDLRRLPKRLRDSEERTMQKSMHKKKAGQGKEGGAEEDLPPA--------------------KRSRRHRRRP-----------SNLKAEYQRRQG--------GHAWLETHIWHAKRFKMVGQWGYKLPLHPSDKSIRATYRAMARHCLLQDVSYLRVVEMSGPQGLTLRALSRLTSPSTGLTCAAAAFLSGQRHGEAV--FYRKDQFPQGAIGPVQFLWKAEATLADSVPKAKGESQEGCEAGMPAASPGGKFEEKGVRKLWLWAHPSCASELLKELKAASEAENANTDSNSRVTVTQLKDSPLRFRLQGPLSHPVLLHALK 347
BLAST of mRNA_H-paniculata_contig2027.5241.1 vs. uniprot
Match: A0A329S154_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S154_9STRA) HSP 1 Score: 135 bits (341), Expect = 9.470e-29 Identity = 86/245 (35.10%), Postives = 121/245 (49.39%), Query Frame = 1
Query: 379 QSEQRCRKHRRRPRSMLEARSPHVTELEDDAPARMDVVMYVRLLSRRWLETHIWHAKRMHMREAWGFMLPTRRSNLGPRAATEAVLKHCTLQDVTFLRPLEIRGPISCLLGVLSTITDPLDCRHKDWVCVQGFVEAPTHVHRVNEFPLGCIAPATVMWSPALDNEMSHGYDEGDHRLKEGGLEEDEDLQRVWLWVHPAGAKEALREIRKACLLEGAPWVGMVEAGPLVGGLCRLRVRGRRAHEIV 1113
QS RCRKH RRP +L+ARS ++ + P RWL TH+WHAKRM M E +G++L R++ AA +AV K TL D ++ +E+ G +L L ++DP + G E + ++ +FP G IAP T MW P + YD G+ +L E +++W+WVHPA EA I AC A +E G LCRL++RGR A E+V
Sbjct: 73 QSALRCRKHERRPHKLLQARS----NVDSERP--------------RWLSTHLWHAKRMTMSEQYGYILALHRADKSASAALQAVRKMATLHDSSYYGVIELYGLPQVILEALQLVSDPNGSDFHGLRFLAGSEEGTSMLYHEGQFPQGAIAPVTFMWRP-----LKRDYDSGEFKLHEDWQNT---KRQLWIWVHPAAYMEAATAIAAACQEVVAEDEEGIEMHDRRGQLCRLKLRGRLADELV 291
BLAST of mRNA_H-paniculata_contig2027.5241.1 vs. uniprot
Match: D0NEH1_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NEH1_PHYIT) HSP 1 Score: 131 bits (330), Expect = 1.970e-27 Identity = 85/241 (35.27%), Postives = 118/241 (48.96%), Query Frame = 1
Query: 391 RCRKHRRRPRSMLEARSPHVTELEDDAPARMDVVMYVRLLSRRWLETHIWHAKRMHMREAWGFMLPTRRSNLGPRAATEAVLKHCTLQDVTFLRPLEIRGPISCLLGVLSTITDPLDCRHKDWVCVQGFVEAPTHVHRVNEFPLGCIAPATVMWSPALDNEMSHGYDEGDHRLKEGGLEEDEDLQRVWLWVHPAGAKEALREIRKACLLEGAPWVGMVEAGPLVGGLCRLRVRGRRAHEIV 1113
RCRKH RRP +L+ARS ++E + P RWL TH WHAKRM M E G++L R++ AA +A+ K TL D ++ +E+ G +L L ++DP + G E + ++R FP G IAP T MW P + Y+ G+ +L E +++WLWVHPA EA I AC A +E G LCRL++RGR A E+V
Sbjct: 77 RCRKHERRPHKLLQARS----DVESEQP--------------RWLSTHFWHAKRMTMSEQHGYILALHRADKSVSAALQAMRKMATLHDSSYYGVIELFGLPQVILEALQLVSDPNGSDFHGLRFLAGTEEGASMLYREGRFPQGAIAPVTFMWRP-----LKKDYEGGEFKLHEDWQST---KRQLWLWVHPAAYMEAATAIAAACQEVVAEDEEGIEMHDRRGQLCRLKLRGRLADELV 291
BLAST of mRNA_H-paniculata_contig2027.5241.1 vs. uniprot
Match: A0A6A3SCP8_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SCP8_9STRA) HSP 1 Score: 129 bits (324), Expect = 1.080e-26 Identity = 109/362 (30.11%), Postives = 155/362 (42.82%), Query Frame = 1
Query: 43 AGLGIPQALDVEHFAQARVQELEFLDIAVAAVTAHENGGDAGSRAGLDVQSQALPRHMRRRAASHKPRRMPVALKNRGRGGGRGXRGQGRDIGPASSRGVSTASAAANNNAAQSEQ-----RCRKHRRRPRSMLEARSPHVTELEDDAPARMDVVMYVRLLSRRWLETHIWHAKRMHMREAWGFMLPTRRSNLGPRAATEAVLKHCTLQDVTFLRPLEIRGPISCLLGVLSTITDPLDCRHKDWVCVQGFVEAPTHVHRVNEFPLGCIAPATVMWSPALDNEMSHGYDEGDHRLKEGGLEEDEDLQRVWLWVHPAGAKEALREIRKACLLEGAPWVGMVEAGPLVGGLCRLRVRGRRAHEIV 1113
AGLG P+ L V FA AR EL+ L HE A +D + +A RRRA + K +MP L++ + AQ +Q RCRKH RRP +L+ R+ +V + E WL +H+WHAKRM M E +G++L R++ AA AV TL D ++ +E+ G +L L ++DP + G E + +H +FP G IAP T MW P + Y+ G+ +L + +++WLWVHPA EA I AC +E G LCRL++RGR A E+V
Sbjct: 2 AGLG-PRVLQVLEFANARAPELQAL---------HELSQHASVSCAVDGKLEAQKNQRRRRANAFKSHKMPQRLRSAPK--------------------------------AQPKQPTDSLRCRKHERRPHKLLQDRT-NVADCERPL----------------WLPSHLWHAKRMTMSERYGYILAMHRADKSVSAALHAVRSKATLYDSSYYGVIELFGLPQLILEALQLVSDPNGSDFHGLRFLAGGEEGRSMLHHEGQFPQGAIAPVTFMWRP-----LQKDYEAGEFKLHDDWQNT---KRQLWLWVHPAAHMEAATAIVSACQAVVGEDEEGIEMHDRRGQLCRLKLRGRMADELV 296
BLAST of mRNA_H-paniculata_contig2027.5241.1 vs. uniprot
Match: M4BLU4_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BLU4_HYAAE) HSP 1 Score: 126 bits (317), Expect = 7.540e-26 Identity = 110/360 (30.56%), Postives = 154/360 (42.78%), Query Frame = 1
Query: 43 AGLGIPQALDVEHFAQARVQELEFLDIAVAAVTAHENGGDAGSRAGLDVQSQALPRHMRRRAASHKPRRMPVALKNRGRGGGRGXRGQGRDIGPASSRGVSTASAAANNNAAQSEQRCRKHRRRPRSMLEARSPHVTELEDDAPARMDVVMYVRLLSRRWLETHIWHAKRMHMREAWGFMLPTRRSNLGPRAATEAVLKHCTLQDVTFLRPLEIRGPISCLLGVLSTITDPLDCRHKDWVCVQGFVEAPTHVHRVNEFPLGCIAPATVMWSPALDNEMSHGYDEGDHRLKEGGLEEDEDLQRVWLWVHPAGAKEALREIRKACLLEGAPWVGMVEAGPLVGGLCRLRVRGRRAHEIVQQV 1122
AGLG P+ L V FA AR EL+ L HE D + + RRRA + K +MP L R + +G RCRKH+RRPR +L+ RS +++ + D P RWL +H++HAKRM M +G++L RS+ AA +AV + DV++ +E+ G S +L L I+DP + G E + ++ V FP G IAP T MW P + YD L E +++WLWVHPA E+ I AC G +E G LCRL++RGR A E+V +
Sbjct: 2 AGLG-PRVLQVLEFANARAPELQAL---------HELSQHHQFSNDTDDKIETQKNQRRRRANAFKSHKMPQRL-----------RATPKKLGSL---------------------RCRKHKRRPRMLLQERSS-LSKADADRP--------------RWLPSHLYHAKRMAMVAQYGYILAAHRSDKSVSAALQAVRTKAMIHDVSYYGVIELYGLPSVILTALQLISDPNGSDFHGRRFLAGDEEGHSMLYHVGRFPQGAIAPVTFMWRP-----LKRDYDSDRFMLHEDWQST---KRQLWLWVHPAAYMESATAIATACQEVGNTDEDSIEMLDRRGQLCRLKLRGRIADELVANI 296
BLAST of mRNA_H-paniculata_contig2027.5241.1 vs. uniprot
Match: A0A3F2RXZ2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RXZ2_9STRA) HSP 1 Score: 125 bits (313), Expect = 3.370e-25 Identity = 107/369 (29.00%), Postives = 161/369 (43.63%), Query Frame = 1
Query: 31 TNRAAGLGIPQALDVEHFAQARVQELEFLDIAVAAVTAHENGGDAGSRAGLDVQSQALPRHMRRRAASHKPRRMPVALKNRGRGGGRGXRGQGRDIGPASSRGVSTASAAANNNAAQSEQRCRKHRRRPRSMLEARSPHVTELEDDAPARMDVVMYVRLLSRRWLETHIWHAKRMHMREAWGFMLPTRRSNLGPRAATEAVLKHCTLQDVTFLRPLEIRGPISCLLGVLSTITDPLDCRHKDWVCVQGFVEAPTHVHRVNEFPLGCIAPATVMWSPALDNEMSHGYDEGDHRLKEGGLEEDEDLQRVWLWVHPAGAKEALREIRKAC---LLEGAPWVGMVEAGPLVGGLCRLRVRGRRAHEIVQQVVR 1128
T+ AGLG P+ L V FA R EL+ L HE +D + + RRRA + K +MP L+ A + + +RCR+H RR +L++RS ++ AP R WL +H+WHAKRM+M +G ML +R++ +A +AV K TL D ++ +E+ G +L L ++DP + G E + ++ +FP G IAP MW P + Y E + +L + E +++WLWVHPA EA I AC + EG V M++ G LCRL++RGR A E+V + +
Sbjct: 292 TSEMAGLG-PRVLQVLEFASTRAPELQAL---------HELSQHDQVVTAMDAKVETQKNQRRRRANAFKSHKMPQRLR------------------------------ATPKSTVKGSERCRQHERRSHKLLQSRSWP----QEGAPERPV-----------WLSSHLWHAKRMNMTPKFGHMLAAQRADKSVSSALQAVRKKATLHDASYYGVIELFGLPQVILEALQLVSDPDGSDFHGLRFLAGDQEGHSMLYHEGQFPKGAIAPVNFMWRP-----LKADYVEEEFKLHD---EWQSTKRQLWLWVHPAAYMEAATAIAGACQTVVREGEEGVQMLDRR---GHLCRLKLRGRLADELVASLAK 594
BLAST of mRNA_H-paniculata_contig2027.5241.1 vs. uniprot
Match: UPI001BB2B30D (ribonucleases P/MRP protein subunit POP1-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB2B30D) HSP 1 Score: 124 bits (310), Expect = 6.930e-25 Identity = 98/356 (27.53%), Postives = 156/356 (43.82%), Query Frame = 1
Query: 58 PQALDVEHFAQARVQELEFLDIAVAAVTAHENGGDAGSRAGLDVQSQALPRHMRRRAASHKPRRMPVALKNRGRGGGRGXRGQGRDIGPASSRGVSTASAAANNNAAQSEQRCRKHRRRPRSMLEARSPHVTELEDDAPARMDVVMYV-RLLSRRWLETHIWHAKRMHMREAWGFMLPTRRSNLGPRAATEAVLKHCTLQDVTFLRPLEIRGPISCLLGVLSTITDP-LDCRHKDWVCVQGFVEAPTHVHRVNEFPLGCIAPATVMWSPALDNEMSHGYDEGDH--RLKEGGLEEDEDLQRVWLWVHPAGAKEALREIRKACLLEGAPWVGMVEAGPLVGGLCRLRVRGRRAHEIV 1113
P+A++V FA AR E+ + ++++ + + Q LPRHMRRRA SH +RMP L+ R + R V AA+ R+HRRRP ++ E MY R + RW+ETHIWHAKR M E WG+ +P S+ RA A +HC + D+++ + +E++G ++ + +T P + + G ++ + +P G I P +W L M+ G H L G ++D ++R+W+W+HP+ KE + E++ C V PL L R R++G AH I+
Sbjct: 20 PRAINVGAFAVARADEINTMMMSIS------------TNNSIQRIFQKLPRHMRRRAMSHNIKRMPRRLRENAR--------------IQAERSVKKKPKQDTTGAAKQS---RRHRRRPGNLRE--------------------MYAKRQMRNRWMETHIWHAKRFKMVERWGWKIPLHPSDKSARAVYRATARHCVISDISYHQVIEVQGTEVNIISAMKHLTSPHVGLTMASRAYLHGTRHGGVLLYHRDTYPHGAIGPVDYLWHCELHASMAPP---GAHSQELNSNGGDDDNKIRRLWMWIHPSCWKEVIDELKVVCSDYN------VSVTPLEDELLRFRLQGPLAHPIL 317 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2027.5241.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2027.5241.1 >prot_H-paniculata_contig2027.5241.1 ID=prot_H-paniculata_contig2027.5241.1|Name=mRNA_H-paniculata_contig2027.5241.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1165bp MSGATNRAAGLGIPQALDVEHFAQARVQELEFLDIAVAAVTAHENGGDAGback to top mRNA from alignment at H-paniculata_contig2027:3875..16857- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2027.5241.1 ID=mRNA_H-paniculata_contig2027.5241.1|Name=mRNA_H-paniculata_contig2027.5241.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=12983bp|location=Sequence derived from alignment at H-paniculata_contig2027:3875..16857- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2027:3875..16857- >mRNA_H-paniculata_contig2027.5241.1 ID=mRNA_H-paniculata_contig2027.5241.1|Name=mRNA_H-paniculata_contig2027.5241.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=6990bp|location=Sequence derived from alignment at H-paniculata_contig2027:3875..16857- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |