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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 1189 |
| Cds size | 1185 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2019.5205.1 >prot_H-paniculata_contig2019.5205.1 ID=prot_H-paniculata_contig2019.5205.1|Name=mRNA_H-paniculata_contig2019.5205.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=395bp
TGRCLSCETDVEDVDYWQIGKIFNSAMSQQFLSKYFKPKEESKTTSTTNG
RENKKIARGAHAAEGSKASPVEVAQTGASGRRPKTRNNNAGKRKAPAPRR
ASSGKEELAPKEVWICPQCTFCNNAARSSVTDRCEVCGQRSPSGAAVGAT
TSAPNVGKIAPKEIEISSSGGEGDGSSDDADDSDVENVFIGQRRKRTKPA
ASSDSINSTVSQRSKTNSRRGEKMKTPSPPHVSSSDAKEKEKRRQKQQQA
LHHQSNIDAGGSTGASKSPPFAVSGSSGGGGRGGDSDAIEQDAALPQCNR
STSHANKTEDADIDTDELEDVPLASNVFESAPSSSPAAAAPGSPRTTWLS
CASKSTKSKASGSFSSSPSSSSTGGGAGSVVITADSFKLRENLGR back to topmRNA from alignment at H-paniculata_contig2019:19734..21894+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2019.5205.1 ID=mRNA_H-paniculata_contig2019.5205.1|Name=mRNA_H-paniculata_contig2019.5205.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2161bp|location=Sequence derived from alignment at H-paniculata_contig2019:19734..21894+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACAGGGCGGTGTTTGAGCTGTGAAACCGACGTCGAGGACGTCGACTACTG
GCAGATTGGGAAAATATTTAACTCTGCTATGTCTCAGCAGTTTTTATCAA
AATACTTCAAGCCCAAGGAAGAAAGTAAGACTACTTCTACTACCAATGGC
AGGGAGAACAAAAAGATCGCCAGAGGTGCACATGCTGCGGAAGGCAGCAA
GGCGTCACCTGTTGAGGTGACGCTGTTTACCTGTCTGGCTGCGCTATTTG
GACGGCATAGGTGTTTCTTATGTGCAGCCTGATGTGAAGGCACCATTGCT
GCAAGCGAAGAAATGTCACATATGCTTGTACATAGTATATGTTGACCCCT
GTTTCAGAGCAGCATGTTGTTCCTACATGTACAACACAGACAGTATTATA
CTGTCCACCATACACAGACCGAGGTTAGTTACAGCAGTAGTTCAAAGAAA
TGGCGCCAACAAGGCGACGGTGAGTTGTAAGACTGTCGACAATAAATACG
CTAAATCTCGTGATGTAGCTGACGTTTTGTGATCGCGCCCCACATAAAAG
GTAGCACAAACTGGCGCCAGCGGGAGAAGACCTAAGACTAGAAATAACAA
CGCTGGAAAACGCAAAGCTCCTGCTCCTCGTCGCGCCAGCAGCGGCAAGG
AAGAACTGGCGCCAAAAGAGGTGTGGATTTGCCCGCAGTGCACATTTTGT
AATAACGCCGCGCGGAGTTCAGTGACCGACCGTTGCGAGGTGTGCGGCCA
ACGGTCGCCCTCGGGGGCGGCGGTGGGGGCTACGACGTCAGCTCCTAATG
TTGGCAAAATAGCGCCGAAGGTAGGAACATGAATTCATCACTTTCAAGGA
GATGCCGGTATGTTGGTGTACAGTTTTTCGGTTTGTACATAATTACACCG
CTCAAACGTGCATGTTTTTTTTTTATCGTGTCTTGTCTGGACCGATTATG
TAGCTCTCGTTGTGGAAGGACGGTGTGGCAAAGTAATAGCTAGATATCAC
TCTCATGTTGTAATGGATTGGCCGGCTGCTTTCTGCCGTCGGGGGGGGGG
GGCTCCCTTGTCTTGTCTTCAATCGCGCGGCGGTTTGTACTGCGCAACGC
AGGATAGCGTTTTTAGCTCCATCGCGGAATGTCTCGTCATGTATGCGTAT
CTGTTTTTCATCGTGCAGATCCGGCGTGATCCTCGGCTTGGTTTTGTATG
GTCGTCTGTACTTTGCGTGTATAGGCTGTATTCTGCCATTAACGTCGTTC
GTCTGCAGTCCCCAGCAGTCCCCAGTACTGTATACAAATGTAATGTTTGT
ATAATTTTGTCAAGGTTGTCTGTCCCATAGTCAATTCCGTCGTCTGCGCA
GACCACCGTTCGCAATTGCACCTTTTGGCAAACTACTTGAAACGGGCCGC
CTCAAGATAGGAAGAAACAGAAAATGATCATTGACTTCGTCCGCATTTGA
ACCGCCACAGGAAATCGAAATTTCAAGCTCAGGTGGCGAGGGCGACGGCA
GTAGTGATGACGCGGACGACTCAGACGTCGAAAACGTATTTATCGGCCAG
CGCCGCAAGCGCACCAAGCCGGCAGCAAGCTCTGACTCGATCAACAGCAC
AGTTTCACAGCGGAGCAAGACCAACTCTCGACGAGGAGAGAAAATGAAGA
CCCCATCCCCGCCTCACGTGTCGTCGTCCGATGCGAAGGAGAAGGAGAAG
CGGCGACAGAAGCAACAGCAAGCGCTACATCACCAATCTAACATAGACGC
TGGCGGGAGCACGGGAGCTTCGAAATCACCCCCCTTCGCTGTAAGTGGTA
GTAGTGGTGGTGGTGGCCGTGGTGGTGATAGTGATGCCATCGAGCAAGAC
GCAGCCTTACCACAGTGTAACCGCAGCACCAGCCACGCCAACAAAACCGA
GGATGCTGACATTGACACCGACGAGCTTGAAGATGTACCGCTTGCTTCAA
ACGTCTTCGAATCGGCACCCTCCTCCTCCCCCGCCGCCGCCGCTCCTGGT
AGCCCCCGAACTACCTGGCTGTCATGCGCCAGTAAGAGCACCAAGAGCAA
GGCTAGTGGGTCCTTCTCTTCTTCGCCCTCGTCCTCCTCGACAGGAGGCG
GGGCGGGGTCCGTGGTAATCACCGCCGACAGTTTCAAGCTGCGGGAGAAC
CTTGGGAGACG back to topCoding sequence (CDS) from alignment at H-paniculata_contig2019:19734..21894+ >mRNA_H-paniculata_contig2019.5205.1 ID=mRNA_H-paniculata_contig2019.5205.1|Name=mRNA_H-paniculata_contig2019.5205.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2370bp|location=Sequence derived from alignment at H-paniculata_contig2019:19734..21894+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACAGGGCGGTGTTTGAGCTGTGAAACCGACGTCGAGGACGTCGACTACTG
GCAGATTGGGAAAATATTTAACTCTGCTATGTCTCAGCAGTTTTTATCAA
AATACTTCAAGCCCAAGGAAGAAAGTAAGACTACTTCTACTACCAATGGC
AGGGAGAACAAAAAGATCGCCAGAGGTGCACATGCTGCGGAAGGCAGCAA
GGCGTCACCTGTTGAGACAGGGCGGTGTTTGAGCTGTGAAACCGACGTCG
AGGACGTCGACTACTGGCAGATTGGGAAAATATTTAACTCTGCTATGTCT
CAGCAGTTTTTATCAAAATACTTCAAGCCCAAGGAAGAAAGTAAGACTAC
TTCTACTACCAATGGCAGGGAGAACAAAAAGATCGCCAGAGGTGCACATG
CTGCGGAAGGCAGCAAGGCGTCACCTGTTGAGGTAGCACAAACTGGCGCC
AGCGGGAGAAGACCTAAGACTAGAAATAACAACGCTGGAAAACGCAAAGC
TCCTGCTCCTCGTCGCGCCAGCAGCGGCAAGGAAGAACTGGCGCCAAAAG
AGGTGTGGATTTGCCCGCAGTGCACATTTTGTAATAACGCCGCGCGGAGT
TCAGTGACCGACCGTTGCGAGGTGTGCGGCCAACGGTCGCCCTCGGGGGC
GGCGGTGGGGGCTACGACGTCAGCTCCTAATGTTGGCAAAATAGCGCCGA
AGGTAGCACAAACTGGCGCCAGCGGGAGAAGACCTAAGACTAGAAATAAC
AACGCTGGAAAACGCAAAGCTCCTGCTCCTCGTCGCGCCAGCAGCGGCAA
GGAAGAACTGGCGCCAAAAGAGGTGTGGATTTGCCCGCAGTGCACATTTT
GTAATAACGCCGCGCGGAGTTCAGTGACCGACCGTTGCGAGGTGTGCGGC
CAACGGTCGCCCTCGGGGGCGGCGGTGGGGGCTACGACGTCAGCTCCTAA
TGTTGGCAAAATAGCGCCGAAGGAAATCGAAATTTCAAGCTCAGGTGGCG
AGGGCGACGGCAGTAGTGATGACGCGGACGACTCAGACGTCGAAAACGTA
TTTATCGGCCAGCGCCGCAAGCGCACCAAGCCGGCAGCAAGCTCTGACTC
GATCAACAGCACAGTTTCACAGCGGAGCAAGACCAACTCTCGACGAGGAG
AGAAAATGAAGACCCCATCCCCGCCTCACGTGTCGTCGTCCGATGCGAAG
GAGAAGGAGAAGCGGCGACAGAAGCAACAGCAAGCGCTACATCACCAATC
TAACATAGACGCTGGCGGGAGCACGGGAGCTTCGAAATCACCCCCCTTCG
CTGTAAGTGGTAGTAGTGGTGGTGGTGGCCGTGGTGGTGATAGTGATGCC
ATCGAGCAAGACGCAGCCTTACCACAGTGTAACCGCAGCACCAGCCACGC
CAACAAAACCGAGGATGCTGACATTGACACCGACGAGCTTGAAGATGTAC
CGCTTGCTTCAAACGTCTTCGAATCGGCACCCTCCTCCTCCCCCGCCGCC
GCCGCTCCTGGTAGCCCCCGAACTACCTGGCTGTCATGCGCCAGTAAGAG
CACCAAGAGCAAGGCTAGTGGGTCCTTCTCTTCTTCGCCCTCGTCCTCCT
CGACAGGAGGCGGGGCGGGGTCCGTGGTAATCACCGCCGACAGTTTCAAG
CTGCGGGAGAACCTTGGGAGAGAAATCGAAATTTCAAGCTCAGGTGGCGA
GGGCGACGGCAGTAGTGATGACGCGGACGACTCAGACGTCGAAAACGTAT
TTATCGGCCAGCGCCGCAAGCGCACCAAGCCGGCAGCAAGCTCTGACTCG
ATCAACAGCACAGTTTCACAGCGGAGCAAGACCAACTCTCGACGAGGAGA
GAAAATGAAGACCCCATCCCCGCCTCACGTGTCGTCGTCCGATGCGAAGG
AGAAGGAGAAGCGGCGACAGAAGCAACAGCAAGCGCTACATCACCAATCT
AACATAGACGCTGGCGGGAGCACGGGAGCTTCGAAATCACCCCCCTTCGC
TGTAAGTGGTAGTAGTGGTGGTGGTGGCCGTGGTGGTGATAGTGATGCCA
TCGAGCAAGACGCAGCCTTACCACAGTGTAACCGCAGCACCAGCCACGCC
AACAAAACCGAGGATGCTGACATTGACACCGACGAGCTTGAAGATGTACC
GCTTGCTTCAAACGTCTTCGAATCGGCACCCTCCTCCTCCCCCGCCGCCG
CCGCTCCTGGTAGCCCCCGAACTACCTGGCTGTCATGCGCCAGTAAGAGC
ACCAAGAGCAAGGCTAGTGGGTCCTTCTCTTCTTCGCCCTCGTCCTCCTC
GACAGGAGGCGGGGCGGGGTCCGTGGTAATCACCGCCGACAGTTTCAAGC
TGCGGGAGAACCTTGGGAGA back to top
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