mRNA_H-paniculata_contig20109.5179.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig20109.5179.1
Unique NamemRNA_H-paniculata_contig20109.5179.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig20109.5179.1 vs. uniprot
Match: A0A6H5K2Q3_9PHAE (GPN-loop GTPase 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2Q3_9PHAE)

HSP 1 Score: 407 bits (1047), Expect = 3.290e-140
Identity = 217/296 (73.31%), Postives = 233/296 (78.72%), Query Frame = 1
Query:    1 DLISLEDAMEELELGPNGGLVYCMEYLLDNMDWLKDELDKFDDDEYIIFDCPGQVELYSHVPVMRNVLDQLKSWSYNVCAVFLLDATFITDPAKFVSGALLSLSAMVQLELPHLNVLTKCDLADRAEVERFLDTDNAALLSMHYPQGQRDFHAGTAPFDNGREREGEEKGDGE------------------GEQEGGETRAAXXXXXXXXXPRGLFGDGNEGVQREAGY-GGRRGTLPKMARLTEAISSVLDDYTMVNFIPLDITDEEDIALVLQHADYIIQYGEDLEPKQPKDDV 831
            DLISLEDAMEELELGPNGGLVYCMEYLLDNMDWLKDELDKFDDDEYIIFDCPGQVELYSHVPVMRNVLDQLKSW+YNVCAVFLLDATFITDPAKF+SGALLSLSAMVQLELPHLNVLTKCDLADR+EVERFLDT+NAAL+SMHYPQ QR  H GTAPF+ G ER GEE                       GE+       A         PRG      + +  + G  G +RG LP++ARLTEAIS VLDDYTMVNF+PLDI DEEDIALVL HADYI+QYGEDLEPKQPKDD+
Sbjct:   56 DLISLEDAMEELELGPNGGLVYCMEYLLDNMDWLKDELDKFDDDEYIIFDCPGQVELYSHVPVMRNVLDQLKSWNYNVCAVFLLDATFITDPAKFMSGALLSLSAMVQLELPHLNVLTKCDLADRSEVERFLDTENAALISMHYPQAQRGVHFGTAPFNRG-ERGGEEDXXXXXXXXXXXXXXXXXXXXXXGEESADVGTGATTAQREELQPRGRL----QVLGAQGGVEGAQRGPLPRLARLTEAISGVLDDYTMVNFLPLDIRDEEDIALVLHHADYIVQYGEDLEPKQPKDDI 346          
BLAST of mRNA_H-paniculata_contig20109.5179.1 vs. uniprot
Match: A0A835YPS9_9STRA (GPN-loop GTPase 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPS9_9STRA)

HSP 1 Score: 292 bits (747), Expect = 7.010e-95
Identity = 157/293 (53.58%), Postives = 196/293 (66.89%), Query Frame = 1
Query:    1 DLISLEDAMEELELGPNGGLVYCMEYLLDNMDWLKDELDKFDDDEYIIFDCPGQVELYS----------------HVPVMRNVLDQLKSWSYNVCAVFLLDATFITDPAKFVSGALLSLSAMVQLELPHLNVLTKCDLADRAEVERFLDTDNAALLSMHYPQGQRDFHAGTAPFDNGREREGEEKGDGEGEQEGGETRAAXXXXXXXXXPRGLFGDGNEGVQREAGYGGRRGTLPKMARLTEAISSVLDDYTMVNFIPLDITDEEDIALVLQHADYIIQYGEDLEPKQPKDDV 831
            DLI+L D MEELELGPNGGLVYCMEYLLDN+DWLKDELD +DDDEYI+FDCPGQVELYS                H+PVM+ +L+  + W Y VC V+ LDATF+ DPAKF+SG LLSLSAMVQLELPH+NVLTKCDLAD  EVE+FLD D+AAL SMH                + R+R G E+G G+G   G     A               +G+  +   A    ++  LP++ RLT AI+ ++D+++MV FIP+DI+D++ +ALVLQHAD+I QYGE LEPK P D+ 
Sbjct:   55 DLITLADVMEELELGPNGGLVYCMEYLLDNVDWLKDELDNYDDDEYIVFDCPGQVELYSYEXXXXXXXXXXXXXXHIPVMKRLLEHFRYWGYTVCGVYALDATFMGDPAKFISGTLLSLSAMVQLELPHINVLTKCDLADMEEVEKFLDLDSAALASMH-----------ELATRSSRQRLGGEQG-GQGAVGGAAASDAARQ------------EGSH-IAAPASSSAQQRALPRLERLTAAIAGIIDEFSMVGFIPMDISDDQSVALVLQHADHITQYGEGLEPKDPDDEA 322          
BLAST of mRNA_H-paniculata_contig20109.5179.1 vs. uniprot
Match: A0A7S2XYS1_9STRA (GPN-loop GTPase 3 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYS1_9STRA)

HSP 1 Score: 265 bits (678), Expect = 2.710e-85
Identity = 142/280 (50.71%), Postives = 176/280 (62.86%), Query Frame = 1
Query:    1 DLISLEDAMEELELGPNGGLVYCMEYLLDNMDWLKDELDKFDDDEYIIFDCPGQVELYSHVPVMRNVLDQLKSWSYNVCAVFLLDATFITDPAKFVSGALLSLSAMVQLELPHLNVLTKCDLADRAEVERFLDTDNAALLSMHYPQGQRDFHAGTAPFDNGREREGEEKGDGEGEQEGGETRAAXXXXXXXXXPRGLFGDGNEGVQREAGYGGRRGTL----PKMARLTEAISSVLDDYTMVNFIPLDITDEEDIALVLQHADYIIQYGEDLEPKQPKDD 828
            DLIS++D MEEL  GPNG LVYCMEYLL+NMDWL+DELD++ DDEYIIFDCPGQVELYSH+PVMR+V+D+LK W YNVC VFL+D+  + DP K +SG L+SLSAMVQLELPH+NVLTKCDL D+  ++ F +      +S+                                                            + V      GG  GTL     K+ARLT+AI SV+DD+TMV+F+PLD+ DE+ I LVL HAD++IQYGEDLEPK+PKDD
Sbjct:   48 DLISVDDVMEELGYGPNGALVYCMEYLLENMDWLRDELDEYGDDEYIIFDCPGQVELYSHIPVMRDVVDRLKMWDYNVCGVFLVDSLVVGDPMKLLSGTLISLSAMVQLELPHVNVLTKCDLVDKEILDNFFEE-----ISVR-----------------------------------------------------------QAVHNSQAVGG--GTLLRRNQKLARLTDAICSVVDDFTMVSFVPLDLRDEDSIGLVLAHADHVIQYGEDLEPKEPKDD 261          
BLAST of mRNA_H-paniculata_contig20109.5179.1 vs. uniprot
Match: A0A6U0IL03_9STRA (GPN-loop GTPase 3 n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0IL03_9STRA)

HSP 1 Score: 246 bits (629), Expect = 4.420e-77
Identity = 134/271 (49.45%), Postives = 179/271 (66.05%), Query Frame = 1
Query:    1 DLISLEDAMEELELGPNGGLVYCMEYLLDNMDWLKDELDKFDDDEYIIFDCPGQVELYSHVPVMRNVLDQLKSWSY--NVCAVFLLDATFITDPAKFVSGALLSLSAMVQLELPHLNVLTKCDLADRAEVERFLDTDNAALLSMHYPQGQRDFHAGTAPFDNGREREGEEKGDGEGEQEGGETRAAXXXXXXXXXPRGLFGDGNEGVQREAGYGGRRGTLPKMARLTEAISSVLDDYTMVNFIPLDITDEEDIALVLQHADYIIQYGEDLE 807
            DLIS++D MEEL LGPNGGL+YCMEYLL+N+DWL D L++FDDDEY+I DCPGQ+ELY+HVPVMR ++D +++  Y  ++ +VF++DATF+ D  KF+SG+LLSLSAM+ LELPH+NVL+KCDL D+  V+  L+T++A  L     + +R        F+ G   E    G          + A+          +       E  +R A    RR    K  RLTEAISS+LDD++MV+F+PLDITDEE I LVL   D++IQYGED E
Sbjct:   61 DLISVDDVMEELGLGPNGGLIYCMEYLLENLDWLLDNLNQFDDDEYLIVDCPGQIELYTHVPVMRRIIDAMRTAGYASDMVSVFIVDATFVADAPKFISGSLLSLSAMIALELPHVNVLSKCDLVDKERVDEILETESAIQLWEIEDRARRREELAVEAFERGESMEPYLAG----------SSASKGFEPGEKLVKANDTPSKESQKRSAAIEHRR---RKRDRLTEAISSLLDDFSMVSFMPLDITDEESIDLVLMTVDHVIQYGEDSE 318          
BLAST of mRNA_H-paniculata_contig20109.5179.1 vs. uniprot
Match: A0A024U8U1_9STRA (GPN-loop GTPase 3 n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024U8U1_9STRA)

HSP 1 Score: 243 bits (620), Expect = 1.100e-76
Identity = 126/278 (45.32%), Postives = 167/278 (60.07%), Query Frame = 1
Query:    1 DLISLEDAMEELELGPNGGLVYCMEYLLDNMDWLKDELDKFDDDEYIIFDCPGQVELYSHVPVMRNVLDQLKSWSYNVCAVFLLDATFITDPAKFVSGALLSLSAMVQLELPHLNVLTKCDLADRAEVERFLDTDNAALLSMHYPQGQRDFHAGTAPFDNGREREGEEKGDGEGEQEGGETRAAXXXXXXXXXPRGLFGDGNEGVQREAGYGGRRGTLPKMARLTEAISSVLDDYTMVNFIPLDITDEEDIALVLQHADYIIQYGEDLEPKQPKDDVS 834
            DLISLED MEEL  GPNGGLVYCMEYL+ N+DWL+D L ++ DD+Y IFDCPGQ+ELYSH+PVM+++   L+ WS+++C V+L+D+ FI+DP+KF+SG L SLSAMVQLELPH+NVLTKCDL D  E+E++LD  +  LL                                        T A                                 T  K   L+ A+ +V++DY+MV F+P++ITDEE I +VL H D+ I YGED+EPK+PKDD++
Sbjct:   55 DLISLEDVMEELGYGPNGGLVYCMEYLIQNLDWLQDLLLEYSDDDYFIFDCPGQIELYSHLPVMKHLCTALQEWSFSICGVYLIDSLFISDPSKFISGILCSLSAMVQLELPHVNVLTKCDLVDEQELEKYLDPSSGYLLETL-------------------------------------TNA---------------------------------TTNKWQPLSRAVCNVINDYSMVAFVPMNITDEESIEMVLHHIDHAINYGEDVEPKEPKDDMA 262          
BLAST of mRNA_H-paniculata_contig20109.5179.1 vs. uniprot
Match: K0R8J1_THAOC (GPN-loop GTPase 3 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R8J1_THAOC)

HSP 1 Score: 239 bits (610), Expect = 1.380e-74
Identity = 130/271 (47.97%), Postives = 175/271 (64.58%), Query Frame = 1
Query:    1 DLISLEDAMEELELGPNGGLVYCMEYLLDNMDWLKDELDKFDDDEYIIFDCPGQVELYSHVPVMRNVLDQLKSWSY--NVCAVFLLDATFITDPAKFVSGALLSLSAMVQLELPHLNVLTKCDLADRAEVERFLDTDNAALLSMHYPQGQRDFHAGTAPFDNGREREGEEKGDGEGEQEGGETRAAXXXXXXXXXPRGLFGDGNEGVQREAGYGGRRGTLPKMARLTEAISSVLDDYTMVNFIPLDITDEEDIALVLQHADYIIQYGEDLE 807
            DLIS++D MEEL+LGPNGGLVYCMEYLL+NMDWL++ LD FDDDEY+I DCPGQ+ELY+H+PVM  ++DQLK W Y   + +VF++DATF+T+PAKF+SG+LL+LSAM+ L+LPH+NVL+KCDL + A +ER L+ ++A  L                          +  GDGEG        +A          +    +  + + R+     R+    K  RLT AI S+LDDY+MV FIPL+I DE+ I+ V+   D+ IQYGED E
Sbjct:   59 DLISVDDVMEELQLGPNGGLVYCMEYLLENMDWLQENLDNFDDDEYLILDCPGQIELYTHIPVMNKIIDQLKLWGYLDKMVSVFVVDATFVTEPAKFISGSLLALSAMISLQLPHVNVLSKCDLVEEASMERVLEMESALQLW-------------------------DVLGDGEG--------SALSMFHELRPKKSARSEEEDKLVRK-----RQERERKWNRLTVAICSLLDDYSMVGFIPLNINDEDSISHVMLTTDHAIQYGEDNE 291          
BLAST of mRNA_H-paniculata_contig20109.5179.1 vs. uniprot
Match: A0A6U3ZEP1_9STRA (GPN-loop GTPase 3 n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZEP1_9STRA)

HSP 1 Score: 236 bits (602), Expect = 2.430e-73
Identity = 131/278 (47.12%), Postives = 176/278 (63.31%), Query Frame = 1
Query:    1 DLISLEDAMEELELGPNGGLVYCMEYLLDNMDWLKDELDKFDDDEYIIFDCPGQVELYSHVPVMRNVLDQLKSWSY--NVCAVFLLDATFITDPAKFVSGALLSLSAMVQLELPHLNVLTKCDLADRAEVERFLDTDNAALLSMHYPQGQRDFHAGTAPFDNGREREGEEKGDGEGEQEGGETRAAXXXXXXXXXPRGLFGDGNEGVQREAGYGGRRGTLPKMARLTEAISSVLDDYTMVNFIPLDITDEEDIALVLQHADYIIQYGEDLEPKQPKDD 828
            DLIS++D MEEL LGPNG L+YCMEYLL+N+DWL+DELD FDDDEY+I DCPGQ+ELY+H+PVMR V+DQ++ W Y  ++ +VF++DATF+ D  KF+SG+LLSLSAM+ +ELPH+NVL+KCDL +   V+R LD  +A  L         ++ +  A                      G+  A            G   DG+E  + E      R    K  RLTEAI ++LDDYTMV+F+PL+ITDE+ I  VL   D+ +QYGED+E +  + D
Sbjct:   61 DLISVDDVMEELGLGPNGSLIYCMEYLLENLDWLQDELDNFDDDEYLILDCPGQIELYTHIPVMRRVIDQMRMWGYESSMMSVFVVDATFVCDAPKFISGSLLSLSAMIAMELPHVNVLSKCDLVEEERVDRILDVGSATEL-----WNIEEYGSSVAIV--------------------GDEMA------------GKKDDGDEISKEERQLIELR--RKKRNRLTEAICTLLDDYTMVSFLPLNITDEDSIDHVLSVVDHTVQYGEDIECRGAEQD 299          
BLAST of mRNA_H-paniculata_contig20109.5179.1 vs. uniprot
Match: K3W7I6_GLOUD (GPN-loop GTPase 3 n=2 Tax=Pythiaceae TaxID=4782 RepID=K3W7I6_GLOUD)

HSP 1 Score: 234 bits (597), Expect = 2.810e-73
Identity = 123/275 (44.73%), Postives = 158/275 (57.45%), Query Frame = 1
Query:    1 DLISLEDAMEELELGPNGGLVYCMEYLLDNMDWLKDELDKFDDDEYIIFDCPGQVELYSHVPVMRNVLDQLKSWSYNVCAVFLLDATFITDPAKFVSGALLSLSAMVQLELPHLNVLTKCDLADRAEVERFLDTDNAALLSMHYPQGQRDFHAGTAPFDNGREREGEEKGDGEGEQEGGETRAAXXXXXXXXXPRGLFGDGNEGVQREAGYGGRRGTLPKMARLTEAISSVLDDYTMVNFIPLDITDEEDIALVLQHADYIIQYGEDLEPKQPKD 825
            DLIS+ED MEEL  GPNGGLVYCMEYL+ N+DWL+D L ++ DD+Y IFDCPGQ+ELYSH+PVM+ + D LK W + +C V+L+D+ FI DP KF+SG L SLSAMVQLELPH+NVLTKCDL D  E+ ++LD  +  LL                                       E  A                                 T PK   L+ AI +V++D++MV F+P+++T EE I  VL H D+ I YGEDLEP++PKD
Sbjct:   48 DLISVEDVMEELGYGPNGGLVYCMEYLVQNLDWLQDLLTEYSDDDYFIFDCPGQIELYSHLPVMKQLCDALKDWGFAICGVYLIDSLFIADPTKFISGVLCSLSAMVQLELPHINVLTKCDLVDEKELSKYLDPSSGYLL---------------------------------------ENLA-------------------------------NSTEPKWRPLSAAICNVINDFSMVAFVPMNVTREESIETVLLHVDHAINYGEDLEPQEPKD 252          
BLAST of mRNA_H-paniculata_contig20109.5179.1 vs. uniprot
Match: A0A7S2RLE6_9STRA (GPN-loop GTPase 3 n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RLE6_9STRA)

HSP 1 Score: 235 bits (600), Expect = 6.400e-73
Identity = 130/277 (46.93%), Postives = 172/277 (62.09%), Query Frame = 1
Query:    1 DLISLEDAMEELELGPNGGLVYCMEYLLDNMDWLKDELDKFDDDEYIIFDCPGQVELYSHVPVMRNVLDQLKSWSYN--VCAVFLLDATFITDPAKFVSGALLSLSAMVQLELPHLNVLTKCDLADRAEVERFLDTDNAALL------SMHYPQGQRDFHAGTAPFDNGREREGEEKGDGEGEQEGGETRAAXXXXXXXXXPRGLFGDGNEGVQREAGYGGRRGTLPKMARLTEAISSVLDDYTMVNFIPLDITDEEDIALVLQHADYIIQYGEDLE 807
            DLIS++D MEEL LGPNGGL+YC+EYLL+NMDWL+DELD FDDDEY++ DCPGQ+ELY+H+PVM+ ++DQL+ W Y+  V +VF++DATF+ D  KF+SG+LLSLSAM+ LELPH+NV++KCDL D  +VER L T++A  L      ++ + Q   DF   T                                         L   GN   + +A          K  +LT++I +VLDD++MV+FIPL+I DEE I  VL H D  IQYGED E
Sbjct:   63 DLISVDDVMEELGLGPNGGLLYCIEYLLENMDWLQDELDAFDDDEYLLLDCPGQIELYTHIPVMKRIVDQLRLWGYDGTVASVFVVDATFLCDAPKFISGSLLSLSAMLSLELPHVNVMSKCDLVDNEQVERVLGTESATQLYELEEYNLKH-QDLEDFKRVTI----------------------------------------LEKSGNASKEDKAWRRQVDARRQKQNKLTKSICNVLDDFSMVSFIPLNIKDEESIDNVLMHVDQTIQYGEDTE 298          
BLAST of mRNA_H-paniculata_contig20109.5179.1 vs. uniprot
Match: A0A7S2PBB3_9STRA (GPN-loop GTPase 3 n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PBB3_9STRA)

HSP 1 Score: 232 bits (592), Expect = 4.230e-72
Identity = 126/275 (45.82%), Postives = 176/275 (64.00%), Query Frame = 1
Query:    1 DLISLEDAMEELELGPNGGLVYCMEYLLDNMDWLKDELDKFDDDEYIIFDCPGQVELYSHVPVMRNVLDQLKSWSY--NVCAVFLLDATFITDPAKFVSGALLSLSAMVQLELPHLNVLTKCDLADRAEVERFLDTDNAA----LLSMHYPQGQRDFHAGTAPFDNGREREGEEKGDGEGEQEGGETRAAXXXXXXXXXPRGLFGDGNEGVQREAGYGGRRGTLPKMARLTEAISSVLDDYTMVNFIPLDITDEEDIALVLQHADYIIQYGEDLE 807
            +LIS++D MEEL+LGPNG LVYCMEYLL+NMDWL+D LD +DDDEY+I DCPGQ+ELY+H+PVM  ++DQ++ W Y  ++ +VF++DATF+TDPAKF+SG+LL+LSAM+ ++LPH+NVL+KCDL + A ++R L+ ++A     +L  H  +      A   P+++                    T AA               + +   Q  A    R     K +RLTE+I S+LDDY+MV F+PL+I DE+ I  VL   D+  QYGEDLE
Sbjct:   37 ELISVDDVMEELQLGPNGSLVYCMEYLLENMDWLQDHLDSYDDDEYLIIDCPGQIELYTHIPVMNKIIDQMRMWGYGESMVSVFVVDATFVTDPAKFISGSLLALSAMIAMQLPHVNVLSKCDLVEEASMDRVLEMESAIQLWDMLGDHSSES-----ASLQPYNH------------LVPATNNSTTAAAT-------------NNDNKAQISAQQRAR-----KWSRLTESICSLLDDYSMVGFVPLNINDEDSITHVLATVDHATQYGEDLE 276          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20109.5179.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K2Q3_9PHAE3.290e-14073.31GPN-loop GTPase 3 n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A835YPS9_9STRA7.010e-9553.58GPN-loop GTPase 3 n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S2XYS1_9STRA2.710e-8550.71GPN-loop GTPase 3 n=1 Tax=Fibrocapsa japonica TaxI... [more]
A0A6U0IL03_9STRA4.420e-7749.45GPN-loop GTPase 3 n=1 Tax=Minutocellus polymorphus... [more]
A0A024U8U1_9STRA1.100e-7645.32GPN-loop GTPase 3 n=7 Tax=Aphanomyces TaxID=100860... [more]
K0R8J1_THAOC1.380e-7447.97GPN-loop GTPase 3 n=1 Tax=Thalassiosira oceanica T... [more]
A0A6U3ZEP1_9STRA2.430e-7347.12GPN-loop GTPase 3 n=2 Tax=Ditylum brightwellii Tax... [more]
K3W7I6_GLOUD2.810e-7344.73GPN-loop GTPase 3 n=2 Tax=Pythiaceae TaxID=4782 Re... [more]
A0A7S2RLE6_9STRA6.400e-7346.93GPN-loop GTPase 3 n=1 Tax=Eucampia antarctica TaxI... [more]
A0A7S2PBB3_9STRA4.230e-7245.82GPN-loop GTPase 3 n=1 Tax=Skeletonema marinoi TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20109contigH-paniculata_contig20109:139..3751 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score372.9
Seed ortholog evalue1.3e-100
Seed eggNOG ortholog2880.D7FQU7
Preferred nameGPN3
KEGG koko:K06883,ko:K12486
KEGG Pathwayko04144,map04144
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000070,GO:0000122,GO:0000212,GO:0000226,GO:0000228,GO:0000278,GO:0000280,GO:0000775,GO:0000779,GO:0000780,GO:0000781,GO:0000784,GO:0000785,GO:0000790,GO:0000792,GO:0000793,GO:0000794,GO:0000819,GO:0002064,GO:0003006,GO:0003674,GO:0003682,GO:0003824,GO:0003924,GO:0004497,GO:0005048,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005720,GO:0005721,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006336,GO:0006338,GO:0006355,GO:0006357,GO:0006606,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006974,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007059,GO:0007062,GO:0007063,GO:0007064,GO:0007088,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007283,GO:0007346,GO:0007399,GO:0007417,GO:0007420,GO:0007548,GO:0008094,GO:0008104,GO:0008150,GO:0008152,GO:0008406,GO:0008584,GO:0009058,GO:0009059,GO:0009653,GO:0009791,GO:0009886,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010035,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010564,GO:0010571,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0010639,GO:0010948,GO:0015031,GO:0015616,GO:0015833,GO:0016020,GO:0016043,GO:0016462,GO:0016491,GO:0016604,GO:0016605,GO:0016705,GO:0016709,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017038,GO:0017111,GO:0019219,GO:0019222,GO:0019748,GO:0019904,GO:0019953,GO:0022402,GO:0022414,GO:0022607,GO:0023052,GO:0030154,GO:0030330,GO:0030855,GO:0030900,GO:0031056,GO:0031060,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031497,GO:0031618,GO:0031933,GO:0031974,GO:0031981,GO:0032204,GO:0032206,GO:0032268,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0033218,GO:0033262,GO:0033365,GO:0033554,GO:0034091,GO:0034092,GO:0034182,GO:0034183,GO:0034502,GO:0034504,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034724,GO:0034728,GO:0035064,GO:0035107,GO:0035108,GO:0035120,GO:0035127,GO:0035128,GO:0035136,GO:0035264,GO:0035295,GO:0035556,GO:0035690,GO:0040007,GO:0042221,GO:0042277,GO:0042393,GO:0042493,GO:0042623,GO:0042770,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044550,GO:0044703,GO:0045005,GO:0045137,GO:0045184,GO:0045740,GO:0045786,GO:0045787,GO:0045839,GO:0045875,GO:0045892,GO:0045893,GO:0045930,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0046546,GO:0046661,GO:0046907,GO:0048232,GO:0048285,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048589,GO:0048608,GO:0048609,GO:0048731,GO:0048736,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051128,GO:0051129,GO:0051130,GO:0051169,GO:0051170,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051321,GO:0051570,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0055114,GO:0060008,GO:0060009,GO:0060173,GO:0060255,GO:0060322,GO:0060429,GO:0061458,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0070013,GO:0070087,GO:0070192,GO:0070198,GO:0070727,GO:0070887,GO:0071103,GO:0071241,GO:0071702,GO:0071704,GO:0071705,GO:0071824,GO:0071840,GO:0072331,GO:0072520,GO:0072594,GO:0072710,GO:0072711,GO:0080090,GO:0090068,GO:0090304,GO:0090329,GO:0097327,GO:0097329,GO:0098687,GO:0098813,GO:0140014,GO:0140030,GO:0140034,GO:0140097,GO:1900112,GO:1901360,GO:1901576,GO:1901580,GO:1901581,GO:1901582,GO:1901698,GO:1901699,GO:1902275,GO:1902679,GO:1902680,GO:1903046,GO:1903047,GO:1903506,GO:1903507,GO:1903508,GO:1904907,GO:1904908,GO:1990421,GO:1990707,GO:2000105,GO:2000112,GO:2000113,GO:2001141,GO:2001251,GO:2001252
EggNOG free text desc.GTP binding
EggNOG OGsKOG1534@1,KOG1534@2759
Ec32 ortholog descriptionGPN-loop GTPase
Ec32 orthologEc-16_000820.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Exons6
Model size855
Cds size831
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929516.831885-CDS-H-paniculata_contig20109:138..2821622929516.831885-CDS-H-paniculata_contig20109:138..282Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20109 139..282 -
1691480895.2366076-CDS-H-paniculata_contig20109:138..2821691480895.2366076-CDS-H-paniculata_contig20109:138..282Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20109 139..282 -
1622929516.8457115-CDS-H-paniculata_contig20109:774..8861622929516.8457115-CDS-H-paniculata_contig20109:774..886Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20109 775..886 -
1691480895.2496576-CDS-H-paniculata_contig20109:774..8861691480895.2496576-CDS-H-paniculata_contig20109:774..886Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20109 775..886 -
1622929516.8632152-CDS-H-paniculata_contig20109:1266..14841622929516.8632152-CDS-H-paniculata_contig20109:1266..1484Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20109 1267..1484 -
1691480895.265823-CDS-H-paniculata_contig20109:1266..14841691480895.265823-CDS-H-paniculata_contig20109:1266..1484Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20109 1267..1484 -
1622929516.877289-CDS-H-paniculata_contig20109:2442..26071622929516.877289-CDS-H-paniculata_contig20109:2442..2607Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20109 2443..2607 -
1691480895.2766497-CDS-H-paniculata_contig20109:2442..26071691480895.2766497-CDS-H-paniculata_contig20109:2442..2607Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20109 2443..2607 -
1622929516.913678-CDS-H-paniculata_contig20109:3182..32361622929516.913678-CDS-H-paniculata_contig20109:3182..3236Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20109 3183..3236 -
1691480895.284926-CDS-H-paniculata_contig20109:3182..32361691480895.284926-CDS-H-paniculata_contig20109:3182..3236Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20109 3183..3236 -
1622929517.070158-CDS-H-paniculata_contig20109:3589..37271622929517.070158-CDS-H-paniculata_contig20109:3589..3727Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20109 3590..3727 -
1691480895.2933025-CDS-H-paniculata_contig20109:3589..37271691480895.2933025-CDS-H-paniculata_contig20109:3589..3727Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20109 3590..3727 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929517.08235-UTR-H-paniculata_contig20109:3727..37511622929517.08235-UTR-H-paniculata_contig20109:3727..3751Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20109 3728..3751 -
1691480895.3037438-UTR-H-paniculata_contig20109:3727..37511691480895.3037438-UTR-H-paniculata_contig20109:3727..3751Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20109 3728..3751 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20109.5179.1prot_H-paniculata_contig20109.5179.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig20109 139..3727 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig20109.5179.1

>prot_H-paniculata_contig20109.5179.1 ID=prot_H-paniculata_contig20109.5179.1|Name=mRNA_H-paniculata_contig20109.5179.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=277bp
MEELELGPNGGLVYCMEYLLDNMDWLKDELDKFDDDEYIIFDCPGQVELY
SHVPVMRNVLDQLKSWSYNVCAVFLLDATFITDPAKFVSGALLSLSAMVQ
LELPHLNVLTKCDLADRAEVERFLDTDNAALLSMHYPQGQRDFHAGTAPF
DNGREREGEEKGDGEGEQEGGETRAAGGEDRRGGGPRGLFGDGNEGVQRE
AGYGGRRGTLPKMARLTEAISSVLDDYTMVNFIPLDITDEEDIALVLQHA
DYIIQYGEDLEPKQPKDDVSCPVLHS*
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mRNA from alignment at H-paniculata_contig20109:139..3751-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig20109.5179.1 ID=mRNA_H-paniculata_contig20109.5179.1|Name=mRNA_H-paniculata_contig20109.5179.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3613bp|location=Sequence derived from alignment at H-paniculata_contig20109:139..3751- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACCTGATTAGTCTTGAGGACGCAATGGAAGAACTAGAGCTTGGTCCTAA CGGAGGTCTGGTGTACTGCATGGAGTACCTGCTCGACAATATGGACTGGC TCAAAGACGAGCTCGACAAGTTTGACGACGATGAATATATAATTTTCGAT TGCCCTGGTCAGGTAGGTATGCATGAGGAATTTCCGCCAATCTTGAATAA TTAGACCCAGCAGAGATGGACATCGTAGGTGGACACAGGTTCCCAAAAAT CACGCTTTTTGTGAGCTATGAGGCAGAAACATTGCCAATGCTCATCACGT CTAAACGCTTCTCGTTGCCAAGCAAACGTCCGATAGGGGACCATCGTCAG ATTGTCTAGCGCACATTGCAAGATCGTGTATATGATGGCCGTTATATATC CAACATAGGTTTGGCGTTCCGAGTAGGCTATATACATATATATATATATC ACATCCCTCGCCGCCCTGTGGACATTTACTGCTGTGCTTCTTCTGCTGTT AAACTGACCAAATAGGTCGAATTGTATAGCCATGTGCCGGTGATGCGCAA CGTACTGGACCAGCTCAAGGTGAGGGTTTGAATGGCTAGATATCGATTGG GTGTGCTACTGCGACACCTCGGCGCTATGAAAAGTTGCACGGATACAGCA AACAGTTGCATGTTTCGTTGCAGCGGATAAGAGAAGACGTTTTTAGACTG TGGGCTCTTCTCCCCCCGCCCTGTTGGTGCTGATGCCGTCTGTTCGGAGA GCATGTTCGATGTTGATCATACGAAAGGCATTGACATTCAAGGCTTTCCT TCGAAGCAGGTCAGTTCTCCTGGTTTCTATTTTGAAGTAAAGAGGTGTAT CCCCTCTCATTGATACTCATCCTCTCCTTCAGAACACATTTTTAACCCCC CGCGATATAATTTCCTCGTTCACCGCGCTGCTCCACATGAGAAGATTGTT TTTAATTGGCTCGGGCGGCAAAGACATTGGTGAAGGTTAATGATTGCGGG TACGGAGAGAGAGAGAGAGAGAGATACGTACCCATGACTCCCTCCGCACC AGTTGGTCGCGTGCTCCCTAAATAAAAAACACACTTGTTTTTCGATGTAT TTGGTTGTGCCATAATACGGCTCGACCTGTGCTGTTACCAGCAGTCCTGG AGCTACAACGTATGCGCCGTGTTCCTGCTGGACGCCACTTTCATCACGGA CCCTGCCAAGTTCGTCAGCGGGGCGCTCTTGAGCCTGAGCGCTATGGTGC AGCTGGAGCTACCGCACCTCAACGTGCTCACCAAATGCGACCTGGCGGAC CGGGCGGAGGTAAAGTGCATGATGACAAGAGAGCAACATAGATGCCTTTT TTCTGCATAATTTAGACTGGCACCCATGTAGCGATACATAGTTTTGTCAA GTTACGTTTTTAATATCGTGTAACTCGGTGATAATAGCGGCTATTACCGC GAAATCTGGGTCCATCTAAAAGTGCTAGGGCACGGCAGCAACGCAGTTCT CCCTCTATGGGTCATAATCCAAATCTTGATTCTCGGTGACCGAAGGCGCT ATCACCACAGGACCAATTCCAATCGAGATGATAGCGACGACGTCGCGGAC TGTACTCGGGAGACCCCGGGAGGAGGGTGGAGGATTCACGTACGTTGGTG GGATTAAAGATGTGCTGCACAGCATGGTCGGACGACTTTTTGGGTGACAA CCATGGTTTGAGTCATCGTTATTTTGTTGGCCTTGGTTTTTTCATGAGAG CTGTGAGCTAGTCTCCTTCTGCCAATCATTTGCCGCTGGTTCATGAACCT CGTGCCCTTTCGCATTGAATCATAGCAGAATTTTTCGTGTCTCGCAATCC GCGGACCAGAGAAAGTGTGGTTGTTACCCGCCAAAGAGGCGTATGGGTGA ATCGTCACCGTGAGCACAAACGTCGATATGCGCAGAGATAATACTACCCC ATTATCCGATCGCTGTTTTTCTTAGGTACCCCGACAGATGACGCTGTGCC TGTTGTACTGACAAGTTCCCTCACCTCACCTTACCTCGCTAGGATGGTGG AGCCATTGTCATGGGTGTGTCATGCCTTCATGCCCACGTCGAATACATTA GTAGCGCACCTGCAGACGTTCAGCGGGATTCGGTGTCACAATGAGGGGAC CATTTGGTAAACAAGATCACTGCCGCTCTACAGAATTTAATACTTTCTTG TTCTGCTCTTCCCGCTTTCCCTTGCCCCCCCCCGTCCAATGTTGTGCGTG GTTTGTTGTTGTAACAGGTGGAGCGGTTCCTAGATACCGACAACGCTGCC CTCCTTTCTATGCACTACCCGCAAGGACAACGAGATTTTCACGCTGGGAC GGCGCCGTTTGATAACGGTCGGGAAAGAGAAGGTGAAGAGAAAGGTGATG GGGAGGGGGAGCAGGAGGGAGGCGAGACCAGGGCGGCAGGAGGGGAGGAC CGAAGAGGGGGAGGACCACGAGGACTATTCGGCGAGTGAGATGCTTGCTT TTGTACTCTTATTGGGCTGTCGGGAAAGTTGTTGTGACCGTGTGATTCTG CTATGGCCCTTAGCTCCTGTTCCTCAGCCAAAGTTTTTGATACTTGCCAA TTACGTATCGACTCAGGATGAATTCGATTATTTTTACCGTAGAACGCATC AATGGAATATTTCCGTGTTGCACTGTTGTATTCTTTTCGCCAAAACACAA AATATTCTTCCTAGTTGGCAAGCATGGGCATTTTTTTTGGTTTGATCTCT TAGTAGTAACATGACGCTCAGATGAGCCCTTGTCTTTCGTGCGCGACGTG TGGAATGTTGTTTTTGCCCCTCTTGTTTCAGAATTGCACACCCCGGCGCG ATTACAAACACCTAGTGGAAATGAGGGCGTGCAGCGGGAAGCTGGCTATG GTGGTCGTCGAGGCACGTTGCCGAAAATGGCTCGCCTAACCGAGGCCATT TCCAGCGTTCTAGACGACTACACAATGGTAATTTTGACGGTTTACACCGT GGTGATGATTTCGATTATTAAATTTATCTCGTGACTGAGTCTGCACATCG CACAAAAACAAATAACGCACGTTTCTGAAAAATCCGCCAGTTTTCCTTTA TTGCCCGTAGCAGATCAAATTGAACGGGGGCACACAAGAGGGTGGTACCT ATGATGATACCCCGCATAGGTTGACTCTAATCTTGCTGCGGTGAAGCGGG GTTTCTCAGCGAATTCATCTCGGCTCAGCACTAGGGAAAAAATGCTAAAT AGCAGTTGGTGACTGCACAGAAAGAAGCTTCTCTGTGCTCGCAAGCCGTA GAAGTGGATCAAAAGCCTCTGGTTTTGCCAAGCATTTCCCAGGATTGTGC ACCACTACCACAATATACTAGCGCGTGCATCTCTTGGTGTTTCGTTTAGC ATACCCATGGTTCTTTGTTACTTCAGCGCGTTTTGTTTCCGCGTGTGTTC CCTTTCATTTTTTGTCAAGGTTAACTTTATACCGTTGGATATAACGGATG AAGAGGACATCGCTCTCGTTTTGCAGCACGCCGATTACATTATCCAGTAC GGAGAGGATCTGGAGCCTAAGCAGCCAAAGGACGACGTGAGTTGCCCAGT TCTTCACTCCTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig20109:139..3751-

>mRNA_H-paniculata_contig20109.5179.1 ID=mRNA_H-paniculata_contig20109.5179.1|Name=mRNA_H-paniculata_contig20109.5179.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1662bp|location=Sequence derived from alignment at H-paniculata_contig20109:139..3751- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAAGAACTAGAGCTTGGTCCTAACGGAGGTCTGGTGTACTGCATGGA
GTACCTGCTCGACAATATGGACTGGCTCAAAGACGAGCTCGACAAGTTTG
ACGACGATGAATATATAATTTTCGATTGCCCTGGTCAGATGGAAGAACTA
GAGCTTGGTCCTAACGGAGGTCTGGTGTACTGCATGGAGTACCTGCTCGA
CAATATGGACTGGCTCAAAGACGAGCTCGACAAGTTTGACGACGATGAAT
ATATAATTTTCGATTGCCCTGGTCAGGTCGAATTGTATAGCCATGTGCCG
GTGATGCGCAACGTACTGGACCAGCTCAAGGTCGAATTGTATAGCCATGT
GCCGGTGATGCGCAACGTACTGGACCAGCTCAAGTCCTGGAGCTACAACG
TATGCGCCGTGTTCCTGCTGGACGCCACTTTCATCACGGACCCTGCCAAG
TTCGTCAGCGGGGCGCTCTTGAGCCTGAGCGCTATGGTGCAGCTGGAGCT
ACCGCACCTCAACGTGCTCACCAAATGCGACCTGGCGGACCGGGCGGAGT
CCTGGAGCTACAACGTATGCGCCGTGTTCCTGCTGGACGCCACTTTCATC
ACGGACCCTGCCAAGTTCGTCAGCGGGGCGCTCTTGAGCCTGAGCGCTAT
GGTGCAGCTGGAGCTACCGCACCTCAACGTGCTCACCAAATGCGACCTGG
CGGACCGGGCGGAGGTGGAGCGGTTCCTAGATACCGACAACGCTGCCCTC
CTTTCTATGCACTACCCGCAAGGACAACGAGATTTTCACGCTGGGACGGC
GCCGTTTGATAACGGTCGGGAAAGAGAAGGTGAAGAGAAAGGTGATGGGG
AGGGGGAGCAGGAGGGAGGCGAGACCAGGGCGGCAGGAGGGGAGGACCGA
AGAGGGGGAGGACCACGAGGACTATTCGGCGAGTGGAGCGGTTCCTAGAT
ACCGACAACGCTGCCCTCCTTTCTATGCACTACCCGCAAGGACAACGAGA
TTTTCACGCTGGGACGGCGCCGTTTGATAACGGTCGGGAAAGAGAAGGTG
AAGAGAAAGGTGATGGGGAGGGGGAGCAGGAGGGAGGCGAGACCAGGGCG
GCAGGAGGGGAGGACCGAAGAGGGGGAGGACCACGAGGACTATTCGGCGA
TGGAAATGAGGGCGTGCAGCGGGAAGCTGGCTATGGTGGTCGTCGAGGCA
CGTTGCCGAAAATGGCTCGCCTAACCGAGGCCATTTCCAGCGTTCTAGAC
GACTACACAATGTGGAAATGAGGGCGTGCAGCGGGAAGCTGGCTATGGTG
GTCGTCGAGGCACGTTGCCGAAAATGGCTCGCCTAACCGAGGCCATTTCC
AGCGTTCTAGACGACTACACAATGGTTAACTTTATACCGTTGGATATAAC
GGATGAAGAGGACATCGCTCTCGTTTTGCAGCACGCCGATTACATTATCC
AGTACGGAGAGGATCTGGAGCCTAAGCAGCCAAAGGACGACGTGAGTTGC
CCAGTTCTTCACTCCTGAGTTAACTTTATACCGTTGGATATAACGGATGA
AGAGGACATCGCTCTCGTTTTGCAGCACGCCGATTACATTATCCAGTACG
GAGAGGATCTGGAGCCTAAGCAGCCAAAGGACGACGTGAGTTGCCCAGTT
CTTCACTCCTGA
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