mRNA_H-paniculata_contig20036.5151.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig20036.5151.1 vs. uniprot
Match: D8LTD6_ECTSI (Protein kinase domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTD6_ECTSI) HSP 1 Score: 129 bits (323), Expect = 1.520e-32 Identity = 66/110 (60.00%), Postives = 80/110 (72.73%), Query Frame = 1
Query: 4 QFIGMELCGHGDAEGLIRNQPDGLLSLSEAHCFLFQMAFALYVGRTELSMRHFDVKLLNFLVADAAALLG-----------MEDGGGVVLRYAVGAEVVELRMPEERAFV 300
Q+IGMELC HGDAE I+ Q DGLL EA FLFQMAFALY GR ELS+RHFDVKLLNF V+DA+ L+G +E+GG V LRY VG +VVEL +P++RA++
Sbjct: 1980 QYIGMELCEHGDAEVFIKTQRDGLLPTVEAQGFLFQMAFALYAGRAELSLRHFDVKLLNFFVSDASRLVGGXXXXXXXXXDVEEGGPVTLRYGVGGDVVELCLPQDRAYL 2089
BLAST of mRNA_H-paniculata_contig20036.5151.1 vs. uniprot
Match: F0YNB9_AURAN (Protein kinase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNB9_AURAN) HSP 1 Score: 82.4 bits (202), Expect = 3.330e-16 Identity = 43/91 (47.25%), Postives = 51/91 (56.04%), Query Frame = 1
Query: 7 FIGMELCGHGDAEGLIRNQPDGLLSLSEAHCFLFQMAFALYVGRTELSMRHFDVKLLNFLVADAAALLGMEDGGGVVLRYAVGAEVVELRM 279
+ MELCGHGD EG +R+ P G L FQM F+LY R L +RH+DVKLLNFL A AA V RYAVG +LR+
Sbjct: 1081 YARMELCGHGDVEGWLRSLPGGALPDGATLALFFQMCFSLYASRAALGLRHYDVKLLNFLAAPVAA--------ATVARYAVGPAAFDLRL 1163
BLAST of mRNA_H-paniculata_contig20036.5151.1 vs. uniprot
Match: A0A4D9D2S7_9STRA (Protein kinase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2S7_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.390e-14 Identity = 46/116 (39.66%), Postives = 55/116 (47.41%), Query Frame = 1
Query: 1 LQFIGMELCGHGDAEGLIRNQPDGLLSLSEAHCFLFQMAFALYVGRTELSMRHFDVKLLNFLVADAAALLGMEDG----------------------GGVVLRYAVGAEVVELRMP 282
LQ I MELC HGD E +R +P G L LFQM FALY R +MRH+D+KLLNFL+AD A + G V +RY +G V LR P
Sbjct: 1821 LQLIRMELCRHGDLEKFLRERPLGALPPGLTRLLLFQMCFALYAARETYAMRHYDLKLLNFLLADFLAPASVASSLPASTFPDKSRPLGCTVDNPATGAVEVRYGLGLHVYRLRFP 1936
BLAST of mRNA_H-paniculata_contig20036.5151.1 vs. uniprot
Match: A0A835ZET0_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZET0_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 6.140e-14 Identity = 41/101 (40.59%), Postives = 58/101 (57.43%), Query Frame = 1
Query: 4 QFIGMELCGHGDAEGLIRNQPDGLLSLSEAHCFLFQMAFALYVGRTELSMRHFDVKLLNFLVADAA----ALLGMEDGGGVVLRYAVGAEVVELRMPEERA 294
QFIGMELC GD EG +R P G+L + + LFQM F+++ R E +RH+D+KLLNFLV+ A A + D V++ + V ++RM A
Sbjct: 147 QFIGMELCELGDVEGYLRELPRGVLPVEDTVAVLFQMLFSIFAARHEYRLRHYDLKLLNFLVSRRAKVPCAAVEQTDQTVSVVQCGIDEHVFDVRMSANHA 247
BLAST of mRNA_H-paniculata_contig20036.5151.1 vs. uniprot
Match: K8YTN3_NANGC (Protein kinase domain-containing protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YTN3_NANGC) HSP 1 Score: 74.3 bits (181), Expect = 2.260e-13 Identity = 37/68 (54.41%), Postives = 43/68 (63.24%), Query Frame = 1
Query: 1 LQFIGMELCGHGDAEGLIRNQPDGLLSLSEAHCFLFQMAFALYVGRTELSMRHFDVKLLNFLVADAAA 204
LQ I MELC HGD E +R +P G L LFQM FALY R +MRH+D+KLLNFL+AD A
Sbjct: 1081 LQLIRMELCRHGDLEKFLRERPLGALPPGLTRLLLFQMCFALYAARETYAMRHYDLKLLNFLLADFLA 1148
BLAST of mRNA_H-paniculata_contig20036.5151.1 vs. uniprot
Match: A0A7S1YM16_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YM16_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 3.080e-13 Identity = 38/99 (38.38%), Postives = 53/99 (53.54%), Query Frame = 1
Query: 4 QFIGMELCGHGDAEGLIRNQPDGLLSLSEAHCFLFQMAFALYVGRTELSMRHFDVKLLNFLVADAAALLGMEDGGGVVLRYAVGAEVVELRMPEERAFV 300
Q++ MELC GDAE ++ PD + + A LFQMAF+LY S++H+DVKLLNF + D VLRY +G+ L MP + +
Sbjct: 823 QYMRMELCQEGDAEEYLKRMPDEMTTTCVARTMLFQMAFSLYTAADRYSLKHYDVKLLNFFLQKVD---DKSDKASTVLRYGLGSLNFALEMPTDTGVI 918
BLAST of mRNA_H-paniculata_contig20036.5151.1 vs. uniprot
Match: A0A1V9YW89_9STRA (Protein kinase domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YW89_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 7.300e-10 Identity = 31/62 (50.00%), Postives = 41/62 (66.13%), Query Frame = 1
Query: 4 QFIGMELCGHGDAEGLIRNQPDGLLSLSEAHCFLFQMAFALYVGRTELSMRHFDVKLLNFLV 189
Q+ MELC G+ E +R G LS+ ++ C FQM FALYVGR + +RHFD+KLLNF +
Sbjct: 528 QYCTMELCDGGNLEDYLR--VHGTLSVHDSLCLFFQMVFALYVGRDQHELRHFDIKLLNFFL 587
BLAST of mRNA_H-paniculata_contig20036.5151.1 vs. uniprot
Match: A0A1V9Y4M9_9STRA (Protein kinase domain-containing protein (Fragment) n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y4M9_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.320e-9 Identity = 31/67 (46.27%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 4 QFIGMELCGHGDAEGLIRNQPDGLLSLSEAHCFLFQMAFALYVGRTELSMRHFDVKLLNFLVADAAA 204
Q++ MELC G+ E +R G L++S+ + FQM FALY GR E ++RH+D+KLLNF V +A
Sbjct: 511 QYVRMELCDGGNVEDHLR--AGGALAVSDVVGYFFQMCFALYTGRIEHALRHYDIKLLNFFVQSHSA 575
BLAST of mRNA_H-paniculata_contig20036.5151.1 vs. uniprot
Match: A0A8J2SVH8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SVH8_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 1.850e-9 Identity = 31/61 (50.82%), Postives = 37/61 (60.66%), Query Frame = 1
Query: 10 IGMELCGHGDAEGLIRNQPDGLLSLSEAHCFLFQMAFALYVGRTELSMRHFDVKLLNFLVA 192
+ M LC GD E +R QP +L F FQM FALY R L +RH+D+KLLNFLVA
Sbjct: 428 VRMGLCSCGDIESWLRRQPGMVLPTCTTLRFFFQMCFALYASRATLGLRHYDLKLLNFLVA 488
BLAST of mRNA_H-paniculata_contig20036.5151.1 vs. uniprot
Match: A0A024UJT8_9STRA (Serine/threonine protein kinase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UJT8_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 4.760e-9 Identity = 39/94 (41.49%), Postives = 50/94 (53.19%), Query Frame = 1
Query: 4 QFIGMELCGHGDAEGLIRNQPDGLLSLSEAHCFLF-QMAFALYVGRTELSMRHFDVKLLNFLVADAAALLGMEDGGGVVLRYAVGAEVVELRMP 282
Q+I MELC G+ E IR DG +L LF QM FALY GR + +RH+D+KLLNF + +A G + YA +V EL P
Sbjct: 626 QYIRMELCDGGNVEDYIR--LDGTSNLIHGWSSLFFQMVFALYAGREQHQLRHYDIKLLNFFLQSTSA-------EGTTMTYAFEEKVFELTSP 710 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20036.5151.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig20036.5151.1 >prot_H-paniculata_contig20036.5151.1 ID=prot_H-paniculata_contig20036.5151.1|Name=mRNA_H-paniculata_contig20036.5151.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=95bp MELCGHGDAEGLIRNQPDGLLSLSEAHCFLFQMAFALYVGRTELSMRHFDback to top mRNA from alignment at H-paniculata_contig20036:1576..1959- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig20036.5151.1 ID=mRNA_H-paniculata_contig20036.5151.1|Name=mRNA_H-paniculata_contig20036.5151.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=384bp|location=Sequence derived from alignment at H-paniculata_contig20036:1576..1959- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig20036:1576..1959- >mRNA_H-paniculata_contig20036.5151.1 ID=mRNA_H-paniculata_contig20036.5151.1|Name=mRNA_H-paniculata_contig20036.5151.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=570bp|location=Sequence derived from alignment at H-paniculata_contig20036:1576..1959- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |