mRNA_H-paniculata_contig20024.5144.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig20024.5144.1 vs. uniprot
Match: D7FXU1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXU1_ECTSI) HSP 1 Score: 303 bits (776), Expect = 8.000e-94 Identity = 141/176 (80.11%), Postives = 161/176 (91.48%), Query Frame = 1
Query: 1 DPEAAVAELLHDLKMLPWGITAVIPGAETGVGLADVLSSRLMVASNGEELSQCRRNKHLMGEQVRSHGVRAVRQTLAQSWDDCETFLQEWQPEPFKAVVKPLESAGSDDVYLCHSIDDVREAFHIIHGKVNGLGAVNEGALIQEFLDGTEYVIDTVSREGVHRVCAIWEYDKRSVN 528
DPEA++AELL +L +LPWGI AV+PGAETGV LAD+LSSRL +ASNGEELS CRRNKHLM EQVRSH VRAVRQ LA+SWDDCE FLQ+W P+PFKAVVKPLESAGSDDVYLC S++DV+EAF +I GKVNGLG VNEGAL+QE+LDGTEYV+D+VSR+GVHR+CAIWEYDKRSVN
Sbjct: 207 DPEASIAELLGELSLLPWGIAAVMPGAETGVELADILSSRLGLASNGEELSLCRRNKHLMAEQVRSHEVRAVRQMLARSWDDCEAFLQDWNPDPFKAVVKPLESAGSDDVYLCRSLEDVKEAFSVIDGKVNGLGGVNEGALVQEYLDGTEYVVDSVSRDGVHRICAIWEYDKRSVN 382
BLAST of mRNA_H-paniculata_contig20024.5144.1 vs. uniprot
Match: A0A6H5LB88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB88_9PHAE) HSP 1 Score: 270 bits (691), Expect = 4.970e-82 Identity = 126/151 (83.44%), Postives = 141/151 (93.38%), Query Frame = 1
Query: 76 GAETGVGLADVLSSRLMVASNGEELSQCRRNKHLMGEQVRSHGVRAVRQTLAQSWDDCETFLQEWQPEPFKAVVKPLESAGSDDVYLCHSIDDVREAFHIIHGKVNGLGAVNEGALIQEFLDGTEYVIDTVSREGVHRVCAIWEYDKRSVN 528
GAETGV LAD+LSSRL +ASNGEELSQCRRNKHLM EQVRSHGVRAVRQ LA+SWDDCE FLQ+W P+PFKAVVKPLESAGSDDVYLC S++DV+EAF +I GKVNGLG VNEGAL+QE+LDGTEYV+D+VSR+GVHR+CAIWEYDKRSVN
Sbjct: 17 GAETGVELADILSSRLGLASNGEELSQCRRNKHLMAEQVRSHGVRAVRQMLARSWDDCEAFLQDWNPDPFKAVVKPLESAGSDDVYLCRSLEDVKEAFSVIDGKVNGLGGVNEGALVQEYLDGTEYVVDSVSRDGVHRICAIWEYDKRSVN 167
BLAST of mRNA_H-paniculata_contig20024.5144.1 vs. uniprot
Match: A0A835Z961_9STRA (ATP-grasp domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z961_9STRA) HSP 1 Score: 259 bits (662), Expect = 1.000e-77 Identity = 123/176 (69.89%), Postives = 145/176 (82.39%), Query Frame = 1
Query: 1 DPEAAVAELLHDLKMLPWGITAVIPGAETGVGLADVLSSRLMVASNGEELSQCRRNKHLMGEQVRSHGVRAVRQTLAQSWDDCETFLQEWQPEPFKAVVKPLESAGSDDVYLCHSIDDVREAFHIIHGKVNGLGAVNEGALIQEFLDGTEYVIDTVSREGVHRVCAIWEYDKRSVN 528
D E A+A L+ LK LPW + AV+ GAE GV +AD+LS+RL + +NGEELS RRNK+ MGE+VRS G RAV+Q +A SWDD ETF EW P PF+ VVKPLESAGSDDVYLCHS D+VR+AF I+GK+NGLG VNEGAL+QEFLDGTEYVID+VSR+GVH+V AIWEYDKRSVN
Sbjct: 193 DSETAIARLVSSLKALPWAVVAVLAGAEPGVEIADILSNRLSLDTNGEELSLARRNKYEMGERVRSCGPRAVQQRMAHSWDDVETFFTEWTPSPFRVVVKPLESAGSDDVYLCHSKDEVRDAFDTINGKINGLGCVNEGALVQEFLDGTEYVIDSVSRDGVHKVVAIWEYDKRSVN 368
BLAST of mRNA_H-paniculata_contig20024.5144.1 vs. uniprot
Match: A0A7R9YE89_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE89_9STRA) HSP 1 Score: 219 bits (558), Expect = 2.650e-65 Identity = 108/176 (61.36%), Postives = 133/176 (75.57%), Query Frame = 1
Query: 1 DPEAAVAELLHDLKMLPWGITAVIPGAETGVGLADVLSSRLMVASNGEELSQCRRNKHLMGEQVRSHGVRAVRQTLAQSWDDCETFLQEWQPEPFKAVVKPLESAGSDDVYLCHSIDDVREAFHIIHGKVNGLGAVNEGALIQEFLDGTEYVIDTVSREGVHRVCAIWEYDKRSVN 528
D + A+ + + +LK LPW + A++PGAETGV LAD L+ L + NGEE S+ RRNK+LMGE VR+ GVRAV+Q A W+ FLQ W PEPF AVVKPLESAGSDDV+ C S ++V AF IHGK NGLG +N+GAL+QEFL G E+VID VSR+GV++V AIWEYDKRSVN
Sbjct: 190 DQQKALQDTIAELKALPWALEAILPGAETGVSLADQLTFALELRGNGEEHSRARRNKYLMGEAVRAAGVRAVKQLYATEWEQVAEFLQGW-PEPFLAVVKPLESAGSDDVFKCGSAEEVETAFRSIHGKKNGLGQLNDGALVQEFLAGREFVIDGVSRDGVYKVMAIWEYDKRSVN 364
BLAST of mRNA_H-paniculata_contig20024.5144.1 vs. uniprot
Match: A0A7S1XUT4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUT4_9STRA) HSP 1 Score: 221 bits (562), Expect = 3.660e-64 Identity = 104/176 (59.09%), Postives = 130/176 (73.86%), Query Frame = 1
Query: 1 DPEAAVAELLHDLKMLPWGITAVIPGAETGVGLADVLSSRLMVASNGEELSQCRRNKHLMGEQVRSHGVRAVRQTLAQSWDDCETFLQEWQPEPFKAVVKPLESAGSDDVYLCHSIDDVREAFHIIHGKVNGLGAVNEGALIQEFLDGTEYVIDTVSREGVHRVCAIWEYDKRSVN 528
D +AA+AE + L+ LPW + V+PGAETGV LAD+L + + NG E ++ RRNK+LMGE +R G+RAV+Q A W ETFL EW P PF VVKPLESAGSDDVY C S+++VR AF IHGK NG+G VN+GAL+QEFL G E+V+D VSR+G ++V IWEYDKRSVN
Sbjct: 196 DQDAALAETVAALRALPWPVVGVLPGAETGVALADLLVFSMELRGNGPEHTRARRNKYLMGEAIRQAGIRAVKQLYATDWAQVETFLAEWNPTPFIVVVKPLESAGSDDVYKCTSVEEVRTAFTTIHGKTNGIGGVNDGALVQEFLTGEEFVVDGVSRDGEYKVVTIWEYDKRSVN 371
BLAST of mRNA_H-paniculata_contig20024.5144.1 vs. uniprot
Match: A0A7S2VWX9_9DINO (Hypothetical protein (Fragment) n=1 Tax=Akashiwo sanguinea TaxID=143672 RepID=A0A7S2VWX9_9DINO) HSP 1 Score: 194 bits (494), Expect = 1.280e-60 Identity = 88/164 (53.66%), Postives = 121/164 (73.78%), Query Frame = 1
Query: 37 LKMLPWGITAVIPGAETGVGLADVLSSRLMVASNGEELSQCRRNKHLMGEQVRSHGVRAVRQTLAQSWDDCETFLQEWQPEPFKAVVKPLESAGSDDVYLCHSIDDVREAFHIIHGKVNGLGAVNEGALIQEFLDGTEYVIDTVSREGVHRVCAIWEYDKRSVN 528
L LP+ I ++PGAE GV LAD L+ + + N LS RRNK+LMGE +R GVR+ +QT+ WD+ E+FL +W P+PFK +VKP +SAGSDDV+LC S+++VR AF+ I+G +N +G +NEG LIQEFL+G EYV+D+VS +G H+V +IW+YDKR N
Sbjct: 2 LNELPFQIDHILPGAENGVSLADELAHAMGLRCNPIALSNARRNKYLMGETIRQAGVRSAKQTICTEWDEVESFLCDWNPDPFKVIVKPNQSAGSDDVFLCKSLEEVRAAFNSINGAINEIGEINEGVLIQEFLEGIEYVVDSVSLDGEHKVVSIWQYDKREAN 165
BLAST of mRNA_H-paniculata_contig20024.5144.1 vs. uniprot
Match: A0A2R5GJX8_9STRA (ATP-grasp domain-containing protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJX8_9STRA) HSP 1 Score: 199 bits (505), Expect = 1.100e-58 Identity = 95/174 (54.60%), Postives = 126/174 (72.41%), Query Frame = 1
Query: 7 EAAVAELLHDLKMLPWGITAVIPGAETGVGLADVLSSRLMVASNGEELSQCRRNKHLMGEQVRSHGVRAVRQTLAQSWDDCETFLQEWQPEPFKAVVKPLESAGSDDVYLCHSIDDVREAFHIIHGKVNGLGAVNEGALIQEFLDGTEYVIDTVSREGVHRVCAIWEYDKRSVN 528
+A A +L DL P + V+PGAE GV +AD L++ + + N ELS RR+K+LMGE +R GVRAV+QT++ WD+ E F+ +W P PFK +VKP SAGSDDV+LC +ID+VR AF I+G +N G VNEG L+QEFL+G EYV+D+VSR G H+V AIW+YDKRS+N
Sbjct: 88 DAETARILQDL---PVDVQLVVPGAENGVVVADYLAAAMGLVHNPTELSIARRSKYLMGETIRLAGVRAVKQTISVDWDEIERFVLDWNPSPFKVIVKPNASAGSDDVFLCKNIDEVRAAFDCINGAINEFGEVNEGVLVQEFLEGIEYVVDSVSRNGEHKVVAIWQYDKRSLN 258
BLAST of mRNA_H-paniculata_contig20024.5144.1 vs. uniprot
Match: A0A812Y190_SYMMI (DdaF protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Y190_SYMMI) HSP 1 Score: 196 bits (497), Expect = 9.180e-58 Identity = 95/174 (54.60%), Postives = 122/174 (70.11%), Query Frame = 1
Query: 7 EAAVAELLHDLKMLPWGITAVIPGAETGVGLADVLSSRLMVASNGEELSQCRRNKHLMGEQVRSHGVRAVRQTLAQSWDDCETFLQEWQPEPFKAVVKPLESAGSDDVYLCHSIDDVREAFHIIHGKVNGLGAVNEGALIQEFLDGTEYVIDTVSREGVHRVCAIWEYDKRSVN 528
EA + + ++ + + A++ GAETGV LAD LSS + + SNG S+ RRNK +MGE VR GVRAV+Q + W E FL EWQP PFK +VKP ESAGS+DV LC S +++REA+H I GKVNGLG VN+ L+QE+L+GTEYVID VS +G H+V A+WEYDK N
Sbjct: 72 EADIGGMATKVRACGFPVMAIMAGAETGVELADALSSNMGLRSNGTAQSEARRNKFVMGETVRRAGVRAVKQKVVTEWQQVEAFLDEWQPNPFKVIVKPTESAGSEDVTLCLSPEELREAYHRIMGKVNGLGLVNKAVLVQEYLEGTEYVIDMVSVDGHHKVVAVWEYDKGPCN 245
BLAST of mRNA_H-paniculata_contig20024.5144.1 vs. uniprot
Match: A0A7S1U8K3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8K3_9STRA) HSP 1 Score: 200 bits (509), Expect = 1.140e-56 Identity = 96/176 (54.55%), Postives = 128/176 (72.73%), Query Frame = 1
Query: 1 DPEAAVAELLHDLKMLPWGITAVIPGAETGVGLADVLSSRLMVASNGEELSQCRRNKHLMGEQVRSHGVRAVRQTLAQSWDDCETFLQEWQPEPFKAVVKPLESAGSDDVYLCHSIDDVREAFHIIHGKVNGLGAVNEGALIQEFLDGTEYVIDTVSREGVHRVCAIWEYDKRSVN 528
D +AA+ + + L + + AV+PGAETGV LAD L+ RL +NG ELS RRNK+ MGE VR+ GVRAV+Q A+ W FL+EW P PF+ +VKP+ESAG+DDV+LC S ++V+EAF ++GK+NGLG N G L+QE+LDG E+VID VSR+GVH+ AIW+YDK+ N
Sbjct: 205 DQDAALEQTVAQLMAMDDPVVAVLPGAETGVLLADRLAVRLGTRNNGMELSLHRRNKYFMGETVRASGVRAVKQLRAEEWGPIADFLREWNPSPFRVIVKPIESAGTDDVFLCKSTEEVQEAFLSVNGKINGLGQRNIGVLVQEYLDGEEFVIDHVSRDGVHKCVAIWQYDKKPTN 380
BLAST of mRNA_H-paniculata_contig20024.5144.1 vs. uniprot
Match: A0A812Z196_SYMMI (DdaF protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Z196_SYMMI) HSP 1 Score: 182 bits (462), Expect = 7.430e-55 Identity = 86/151 (56.95%), Postives = 110/151 (72.85%), Query Frame = 1
Query: 76 GAETGVGLADVLSSRLMVASNGEELSQCRRNKHLMGEQVRSHGVRAVRQTLAQSWDDCETFLQEWQPEPFKAVVKPLESAGSDDVYLCHSIDDVREAFHIIHGKVNGLGAVNEGALIQEFLDGTEYVIDTVSREGVHRVCAIWEYDKRSVN 528
GAETGV LAD LSS L + +NG S+ RRNK++MGE +R+ G+RAV+Q A +W + FL EW+P PF+ V+KP+ SAGSDDV LC S+ V+EAF I GK+N LG VN L+QE+LDG E+V+D VSR+G H+V AIWEYD R N
Sbjct: 3 GAETGVELADKLSSHLGLRTNGTSKSEARRNKYIMGETIRAAGIRAVKQLRASTWGEIMEFLDEWRPSPFQVVLKPISSAGSDDVILCQSVQGVQEAFGRIIGKINALGLVNSAVLVQEYLDGPEFVVDMVSRDGEHKVVAIWEYDWRPAN 153 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20024.5144.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig20024.5144.1 >prot_H-paniculata_contig20024.5144.1 ID=prot_H-paniculata_contig20024.5144.1|Name=mRNA_H-paniculata_contig20024.5144.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=178bp DPEAAVAELLHDLKMLPWGITAVIPGAETGVGLADVLSSRLMVASNGEELback to top mRNA from alignment at H-paniculata_contig20024:217..2175- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig20024.5144.1 ID=mRNA_H-paniculata_contig20024.5144.1|Name=mRNA_H-paniculata_contig20024.5144.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1959bp|location=Sequence derived from alignment at H-paniculata_contig20024:217..2175- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig20024:217..2175- >mRNA_H-paniculata_contig20024.5144.1 ID=mRNA_H-paniculata_contig20024.5144.1|Name=mRNA_H-paniculata_contig20024.5144.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1068bp|location=Sequence derived from alignment at H-paniculata_contig20024:217..2175- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |