mRNA_H-paniculata_contig19983.5104.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig19983.5104.1 vs. uniprot
Match: D8LJ34_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ34_ECTSI) HSP 1 Score: 241 bits (614), Expect = 2.840e-71 Identity = 122/186 (65.59%), Postives = 146/186 (78.49%), Query Frame = 1
Query: 1 IVSRGNVFELAPQQPALLDGTCPIQLIICEGAVAAGTRVRVHVEACSGGG-EQLKADSKPLMVCRAALAVVNQPPDCWYKDEGGKNNCIEITVQVREKAS----GKEQPGVPLNLALEYEAGTEVHSQEILQVQSDTQLLTNEAGRANLKFKITEVSQRHQSKKFRVKISPDLKTSPSATDVGEVV 543
+ + N+FEL PQ+PALLDG+ L++ EG V G R++VHVE SG G EQ+KADS+P+MVCR+AL VV+QPP+ WYKDEGGKNNCI I VREK G+ QPGVPL LAL YEAGTEVHSQEILQVQSDTQL+TNE GRANLKFKITEVSQRHQS++F VKI PD++ +P ++V VV
Sbjct: 94 VATHPNMFELTPQRPALLDGSTTFHLLLWEGCVRTGNRIKVHVETSSGRGREQIKADSEPIMVCRSALTVVSQPPESWYKDEGGKNNCIAIEATVREKLPSGQVGQAQPGVPLTLALVYEAGTEVHSQEILQVQSDTQLVTNEHGRANLKFKITEVSQRHQSQRFCVKICPDVRLAPEFSNVAPVV 279
BLAST of mRNA_H-paniculata_contig19983.5104.1 vs. uniprot
Match: A0A7S3XNC4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNC4_HETAK) HSP 1 Score: 108 bits (270), Expect = 3.900e-24 Identity = 64/179 (35.75%), Postives = 97/179 (54.19%), Query Frame = 1
Query: 25 ELAPQQPALLDGTCPIQLIICEGAVAAGTRVRVHVEACSGGGEQ--LKADSKPLMVCRAALAVVNQPPDCWYKDEGGKNNCIEITVQV----REKASGKEQPGVPLNLALEYEAGTEVHSQEILQVQSDTQLLTNEAGRANLKFKITEVSQRHQSKKFRVKISPDLKTSPSATDVGEVV 543
+ P L+G + + EG G+R+R+ V G LK+ S PL++CR LA++ +PP+ W+KDEGGK+NCI + V + R + SG E +PL L YE G V +IL + L T G+ ++FK++ SQ HQ K FR++I+PD + P +D+ VV
Sbjct: 100 QTVPASNFFLNGQVSFSIQLSEGFKPIGSRIRIKVSTNIGNSRSAVLKSFSAPLLLCRGTLALLTEPPEKWFKDEGGKSNCIPLEVVLDCKDRSRISGIEN--IPLRATLLYEDGQVVPISDILHPIENMSLPT--FGKTLIQFKVSHCSQSHQGKLFRIQIAPDTQYQPELSDIQPVV 274
BLAST of mRNA_H-paniculata_contig19983.5104.1 vs. uniprot
Match: A0A7S4D5X0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5X0_HETAK) HSP 1 Score: 103 bits (258), Expect = 1.240e-22 Identity = 61/161 (37.89%), Postives = 86/161 (53.42%), Query Frame = 1
Query: 49 LLDGTCPIQLIICEGAVAAGTRVRVHVEACSGGGEQLKADSKPLMVCRAALAVVNQPPDCWYKDEGGKNNCIEITVQVREKA----------SGKEQPG---VPLNLALEYEAGTEVHSQEILQVQSDTQLLTNEAGRANLKFKITEVSQRHQSKKFRVKI 492
L+DG C + AG V VHV+A A S+ + +C A L VV PP WYKDEGGK NCI + V+++ A + + +P VPL +AL YE G V Q ILQ+ D++L A L+F++ EVSQRHQ ++FR+++
Sbjct: 93 LVDGVCRFSFKLGPNVKLAGNTVAVHVDARVADVSIPPASSELMTICSALLEVVADPPTKWYKDEGGKGNCITLNVRLKGPAGEGLPEEGGPAARARPAAQEVPLFVALLYEDGKAVGQQGILQLARDSRLAVGPGAPATLRFRVGEVSQRHQGQRFRIRV 253
BLAST of mRNA_H-paniculata_contig19983.5104.1 vs. uniprot
Match: A0A6H5JP05_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP05_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 1.200e-20 Identity = 67/189 (35.45%), Postives = 102/189 (53.97%), Query Frame = 1
Query: 16 NVFELAPQQPALLDGT--CPIQLIICEGAVAAGTR-VRVHVEACSGGGEQLKADSKPLMVCRAALAVVNQP----PDCWYKDEGGKNNCIEITVQVREKASGKEQPG--VPLNLALEYEAGTEVHSQEILQVQSDTQLLTNEAGRANLKFKITEVSQRHQSKK----FRVKISPDLKTSPSATDVGEVV 543
V + P P + +G C I++ I + R R+ VEA G + A + L V R L ++ P PD WYKDEGG+ NC+E+ V + SG+E VPL L L Y+ V +QEIL++ D++L+ +E G+A L+ +I EVS+ HQ + FR+K+ PD++ P + D+ VV
Sbjct: 96 GVLVMDPVAPKISNGAGKCSIRMKITDDKTTMERRRFRIKVEA-DGRADIEAALTDKLTVIRNRLEILENPDNPVPDQWYKDEGGRENCVELQVHLLGP-SGEEVKSRRVPLRLVLMYDNMHRVQNQEILKLSPDSKLVIDEHGKATLRVRIEEVSKNHQKQATRIAFRIKVEPDVQEQPLSMDISSVV 282
BLAST of mRNA_H-paniculata_contig19983.5104.1 vs. uniprot
Match: A0A8K1CPC7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPC7_PYTOL) HSP 1 Score: 93.6 bits (231), Expect = 6.640e-19 Identity = 59/171 (34.50%), Postives = 99/171 (57.89%), Query Frame = 1
Query: 1 IVSRGNVFELAPQQPAL--LDGTCPIQLIICEGAVAAGTRVRVHVEACSGGGEQLKADSKPLMVCRAALAVVNQPPDCWYKDEGGKNNCIEITVQVREKASGK--EQPGVPLNLALEYEAGTEVHSQEILQVQSDTQLLTNEAGRANLKFKITEVSQRHQSKKFRVKISPD 501
+V ++ E+ P + + GTC +++++ + A+ R +E S G+ A S P+ V + L++V QPPD W+KDEGG+ C+ + V V E A G E VPL L L YE+GT V +Q+IL++ D + + GR ++ F+I +VS+ HQ + F ++I+P+
Sbjct: 59 VVPDQSLVEVDPSSMIVDRVSGTCQLRVMLKKLTAASDGRAYC-IEVRSVDGQIESAFSSPIQVVKEKLSIVQQPPDVWFKDEGGREKCMVVIV-VLEAAPGSPIEDRVVPLQLRLLYESGTAVLNQQILRLFPDMRPNMSR-GRISISFRIDDVSKNHQGQSFVLEIAPE 226
BLAST of mRNA_H-paniculata_contig19983.5104.1 vs. uniprot
Match: D8LAY0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAY0_ECTSI) HSP 1 Score: 89.4 bits (220), Expect = 1.450e-17 Identity = 63/185 (34.05%), Postives = 96/185 (51.89%), Query Frame = 1
Query: 16 NVFELAPQQPALLDGT--CPIQLIICEGAVAAGTR-VRVHVEACSGGGEQLKADSKPLMVCRAALAVVNQP----PDCWYKDEGGKNNCIEITVQVREKASGKEQPG--VPLNLALEYEAGTEVHSQEILQVQSDTQLLTNEAGRANLKFKITEVSQRHQSKKFRVKISPDLKTSPSATDVGEVV 543
V + P P + +G C I++ I + R R+ VEA G + A + L V R L ++ P PD WYKDEGG+ NC+E+ V + SG+E VPL L L Y+ V +QEIL++ D++L+ +E G+A L+ +I E FR+K+ PD++ P + D+ VV
Sbjct: 96 GVLVMDPVAPKISNGAGKCSIRMKITDDKTTMERRRFRIKVEAV-GRADIEAALTDKLTVIRNRLEILENPGNPVPDQWYKDEGGRENCVELQVHLLGP-SGEEVKSRRVPLRLVLMYDNMHRVQNQEILKLSPDSKLVIDEHGKATLRVRIEEA--------FRIKVEPDVQEQPLSMDISSVV 270
BLAST of mRNA_H-paniculata_contig19983.5104.1 vs. uniprot
Match: A0A6G0WPZ0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WPZ0_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.820e-17 Identity = 56/179 (31.28%), Postives = 90/179 (50.28%), Query Frame = 1
Query: 1 IVSRGNVFELAPQQPALL--DGTCPIQLIICEGAVAAGTRVRVHVEACSGGGEQLKADSKPLMVCRAALAVVNQPPDCWYKDEGGKNNCIEITVQVREKASGKEQPGVPLNLALEYEAGTEVHSQEILQVQSDTQLLTNEAGRANLKFKITEVSQRHQSKKFRVKISPDLKTSPSATDV 531
I S + ++ P L+ DG C + L I E ++ G + + G E S + L + + P+ WYKDEGG++ C+ + V + + + VPL + L YE+ V Q+IL++ D+Q L + G+A LK +I +VS+ HQ + FR+K+ PD SP DV
Sbjct: 64 ISSDKPLVKIDPTTKPLINGDGMCRLMLSIEETSMQHGNKKFQFLLTPLGDFEVAPIMSTDMTCITHRLMIQEELPELWYKDEGGRDKCMNLPVHLVDATNQPVPRAVPLRVTLLYESEHPVLKQDILKLSPDSQRLIDSHGQALLKLRIEDVSKNHQGQAFRLKVEPDTAQSPLFFDV 242
BLAST of mRNA_H-paniculata_contig19983.5104.1 vs. uniprot
Match: A0A836CR41_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR41_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 2.630e-17 Identity = 60/182 (32.97%), Postives = 100/182 (54.95%), Query Frame = 1
Query: 37 QQPALLD--GTCPIQLIICE----GAVAAGTRVRVHVEACSGGGEQLKAD-SKPLMVCRAALAVVNQP----PDCWYKDEGGKNNCIEITVQVREKASGKEQPG--VPLNLALEYEAGTEVHSQEILQVQSDTQLLTNEAGRANLKFKITEVSQRHQSKKFRVKISPDLKTSPSATDVGEVV 543
+QP L+ G C ++L + E G G R + ++A + + + ++P+ + R L V + P P W+KDEGG+ NC+E+ V + +K G E V L L L Y+ V +QEIL++ D+++ ++ G+A L+ +I EVS+ HQ + FR+K+ PD +P+A DV V
Sbjct: 77 KQPLTLNSKGGCEVKLRVAEDNKLGGAVGGLR-KFSIKAVAPHRDDVDPIITEPVTIVRYRLQVRDNPARPVPKEWFKDEGGRENCVEMQVHLLDK-DGHEVTTRRVKLRLVLLYDNLGRVQNQEILKLSPDSKMAIDDEGKAMLRLRIEEVSKNHQKQAFRIKVEPDTDDNPTAVDVSSDV 256
BLAST of mRNA_H-paniculata_contig19983.5104.1 vs. uniprot
Match: A0A7S2RMX5_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RMX5_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 6.420e-17 Identity = 52/166 (31.33%), Postives = 88/166 (53.01%), Query Frame = 1
Query: 43 PALLDGTCPIQLIICEGAVAAGTRVRVH---VEACSGGGEQLKADSKPLM-----VCRAALAVVNQPPDCWYKDEGGKNNCIEITVQVREKASGKEQPGVPLNLALEYEAGTEVHSQEILQVQSDTQLLTNEAGRANLKFKITEVSQRHQSKKFRVKISPDLKTSP 516
P+L+ T +L++ G ++ R V+ G L D P+M V + + V+N+ P WYKD+GG++ CI+I +++R + VPL L YE V +Q+ILQ T ++ + G+A ++ +I +VS+ HQSK FR+++ PD +P
Sbjct: 106 PSLISKTGSCKLMVKVGELSMNRNNRKFCFVVKRQPGPRGLLPRDVNPVMTRAMLVINSQIKVLNEVPSVWYKDQGGRDKCIDIDLELRGPNGLQLGREVPLKAVLLYEDFQRVINQDILQPSPTTTMVIGKTGKAQIRLRIEDVSKNHQSKSFRIRVEPDTSKTP 271
BLAST of mRNA_H-paniculata_contig19983.5104.1 vs. uniprot
Match: A0A2R5GKG8_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GKG8_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 8.900e-17 Identity = 58/183 (31.69%), Postives = 93/183 (50.82%), Query Frame = 1
Query: 4 VSRGNVFELAPQQPALLD---GTCPIQLIICEGAVAAGTRVRVH-VEACSGGGEQLKADSKPLM-----VCRAALAVVNQPPDCWYKDEGGKNNCIEITVQV---REKASGKEQPGVPLNLALEYEAGTEVHSQEILQVQSDTQLLTNEAGRANLKFKITEVSQRHQSKKFRVKISPDLKTSP 516
+S E+ P P L++ G +++ + E + G R V+ +G L + P+M V A + V N+ P WYKD+GG++ CI+I +++ +G+E VPL L YE +V Q+ILQ T L +G+ ++ +I +VS+ HQSK FR++I PD SP
Sbjct: 92 ISSSPCIEIDPSTPPLIERGKGCAALRVKVLELSRTRGNRKFCFMVKRRAGPRGNLPREVSPVMTRAMLVVNAHIVVTNEMPKVWYKDQGGRDKCIDIDLELVGPHGIVTGQE---VPLKCVLLYEDFKQVLHQDILQPSPTTVLKIGTSGKTRVRLRIEDVSKNHQSKNFRIRIEPDTSNSP 271 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19983.5104.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig19983.5104.1 >prot_H-paniculata_contig19983.5104.1 ID=prot_H-paniculata_contig19983.5104.1|Name=mRNA_H-paniculata_contig19983.5104.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=181bp IVSRGNVFELAPQQPALLDGTCPIQLIICEGAVAAGTRVRVHVEACSGGGback to top mRNA from alignment at H-paniculata_contig19983:927..4190+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig19983.5104.1 ID=mRNA_H-paniculata_contig19983.5104.1|Name=mRNA_H-paniculata_contig19983.5104.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3264bp|location=Sequence derived from alignment at H-paniculata_contig19983:927..4190+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig19983:927..4190+ >mRNA_H-paniculata_contig19983.5104.1 ID=mRNA_H-paniculata_contig19983.5104.1|Name=mRNA_H-paniculata_contig19983.5104.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1086bp|location=Sequence derived from alignment at H-paniculata_contig19983:927..4190+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |