mRNA_H-paniculata_contig19871.5074.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig19871.5074.1 vs. uniprot
Match: A0A6H5KNL3_9PHAE (HSF_DOMAIN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KNL3_9PHAE) HSP 1 Score: 218 bits (554), Expect = 8.150e-61 Identity = 184/371 (49.60%), Postives = 212/371 (57.14%), Query Frame = 1
Query: 1 YISDNKFSSFQRQLNLYGFRKVVKGRESGCYMHPSFLRDHPEKLTEVKRGVVPPCPAHYSRKIYGSGPRFMNQDDGSDSEPELVVQPRGHWEKGMGVSEMATHMRLGEMHISAAALAAARAQIKADGQDAASSGHAXXXXXXXXXXXRVAAHMVGGSPHDN-RGNLMNSSSHMMDAGG---GMPQQQHQQVASRGALGFGPXXXXXXXXXXXXXXXXXXXXXXXXXXNRVRAGRSSLTVNRSH------HIXXXXXXXXXXXXFQMALPRVYPSLQPPSEQHTGDRRNSAGGDQMGGPGDGFIGLPPTLACAAGQE-----GLLGIESRGVAGDGTGVSLKQPAQST-VLSLSRLLDGLGQTLDSPLEEEV 1065
Y NKFSSFQRQLNLYGFRKVVKGRESGCYMHPSFLRD PEKLTEVKRGVVPPCP YSRKIYGSGPRFM+Q++GSDSEPELVVQ RGHWEK +G +++ATHMRLGEMH+SAAAL AAR XXXXX AH+ G D+ RG GG GMP+ A G PXXXXXXXXXXX +RA SS V+RS H+ XXXXXXXX + + P +EQ +S D GG G +G P LA G+E G +E G + G G +P Q+ VLSLSRLL+ L TL++PL EE+
Sbjct: 48 YFKHNKFSSFQRQLNLYGFRKVVKGRESGCYMHPSFLRDSPEKLTEVKRGVVPPCPPCYSRKIYGSGPRFMSQEEGSDSEPELVVQARGHWEKSLGPTDVATHMRLGEMHMSAAALGAARXXXXXXXXXXXXXXXXXXXXXAVHHLQAAQAHIQGVPGGDSSRG-----------PGGVVVGMPEMD-------AARGLPPXXXXXXXXXXXKSPF-------------LRAS-SSGNVDRSSAQQPQPHMQQHRXXXXXXXXXXXXMQHRFGGASPMAEQ------SSPHDDARGGGDAGSLGYMPPLAAVGGREEGMPMGAPTVEEVGSSARGMGDF--RPGQTPMVLSLSRLLENLEHTLEAPLAEEM 378
BLAST of mRNA_H-paniculata_contig19871.5074.1 vs. uniprot
Match: D7FI12_ECTSI (Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI12_ECTSI) HSP 1 Score: 163 bits (413), Expect = 6.260e-44 Identity = 72/93 (77.42%), Postives = 81/93 (87.10%), Query Frame = 1
Query: 1 YISDNKFSSFQRQLNLYGFRKVVKGRESGCYMHPSFLRDHPEKLTEVKRGVVPPCPAHYSRKIYGSGPRFMNQDDGSDSEPELVVQPRGHWEK 279
Y NKFSSFQRQLNLYGFRK+VKGRESGCYMHP FLRD PE L+EV+RGVVPPCP Y+RK+YGSGPRFMNQDD +DSEPELV+ RG+ E+
Sbjct: 67 YFKHNKFSSFQRQLNLYGFRKIVKGRESGCYMHPMFLRDRPELLSEVRRGVVPPCPPEYTRKVYGSGPRFMNQDDETDSEPELVIPSRGNRER 159
BLAST of mRNA_H-paniculata_contig19871.5074.1 vs. uniprot
Match: A0A6H5L4Y2_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y2_9PHAE) HSP 1 Score: 160 bits (406), Expect = 1.750e-42 Identity = 69/90 (76.67%), Postives = 79/90 (87.78%), Query Frame = 1
Query: 1 YISDNKFSSFQRQLNLYGFRKVVKGRESGCYMHPSFLRDHPEKLTEVKRGVVPPCPAHYSRKIYGSGPRFMNQDDGSDSEPELVVQPRGH 270
Y NKFSSFQRQLNLYGFRK+VKGRESGCYMHP FLRD P+ L+EV+RG+VPPCP Y+RK+YGSGPRFMNQDD +DSEPELV+ RG+
Sbjct: 48 YFKHNKFSSFQRQLNLYGFRKIVKGRESGCYMHPMFLRDRPDLLSEVRRGIVPPCPPEYTRKVYGSGPRFMNQDDETDSEPELVIPSRGN 137
BLAST of mRNA_H-paniculata_contig19871.5074.1 vs. uniprot
Match: A0A835YPY0_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPY0_9STRA) HSP 1 Score: 114 bits (286), Expect = 8.620e-28 Identity = 53/89 (59.55%), Postives = 64/89 (71.91%), Query Frame = 1
Query: 1 YISDNKFSSFQRQLNLYGFRKVVKGRESGCYMHPSFLRDHPEKLTEVKRGVVPPCPAHYSRKIYGSGPRFMNQDDGSDSEPELVVQPRG 267
+ +KFSSFQRQLNLYGFRK+V+GRESG YMH F R + L VKRG +PPCP Y +KIYGSG R +D +DS+PEL+ PRG
Sbjct: 32 HFKHDKFSSFQRQLNLYGFRKIVRGRESGGYMHKDFQRGRLDLLKHVKRGYMPPCPPEYEKKIYGSGAR--GEDSEADSDPELIPPPRG 118
BLAST of mRNA_H-paniculata_contig19871.5074.1 vs. uniprot
Match: A0A835YN41_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN41_9STRA) HSP 1 Score: 114 bits (284), Expect = 9.370e-26 Identity = 54/95 (56.84%), Postives = 61/95 (64.21%), Query Frame = 1
Query: 1 YISDNKFSSFQRQLNLYGFRKVVKGRESGCYMHPSFLRDHPEKLTEVKRGVVPPCPAHYSRKIYGSGPR------------FMNQDDGSDSEPEL 249
Y +KFSSFQRQLNLYGFRK+VKGRESGCY+H F R HPE L +V+RG VPPCP Y RK+YG R D SDSEPE+
Sbjct: 65 YFKHDKFSSFQRQLNLYGFRKIVKGRESGCYIHCYFQRGHPELLKQVRRGQVPPCPPRYERKVYGCSTRPRQGAGSALDGTARTSDSSSDSEPEM 159
BLAST of mRNA_H-paniculata_contig19871.5074.1 vs. uniprot
Match: A0A835Z0U6_9STRA (HSF-type DNA-binding-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0U6_9STRA) HSP 1 Score: 104 bits (260), Expect = 4.160e-24 Identity = 44/66 (66.67%), Postives = 51/66 (77.27%), Query Frame = 1
Query: 1 YISDNKFSSFQRQLNLYGFRKVVKGRESGCYMHPSFLRDHPEKLTEVKRGVVPPCPAHYSRKIYGS 198
Y +KFSSFQRQLNLYGFRK+VKG ESGCY+H F R HPE L +V+RG +PPCP Y K+YGS
Sbjct: 45 YFKHDKFSSFQRQLNLYGFRKIVKGNESGCYIHTYFRRGHPELLKQVRRGQMPPCPPRYEHKVYGS 110
BLAST of mRNA_H-paniculata_contig19871.5074.1 vs. uniprot
Match: A0A835Z533_9STRA (HSF-type DNA-binding-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z533_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 1.680e-20 Identity = 41/67 (61.19%), Postives = 50/67 (74.63%), Query Frame = 1
Query: 1 YISDNKFSSFQRQLNLYGFRKVVKGRESGCYMHPSFLRDHPEKLTEVKRGVVPPCPAHYSRKIYGSG 201
+ +KFSSFQRQLNLYGFRK+V+G+E+G YMH F R + L V+RG +PPCP Y RKIYGSG
Sbjct: 43 HFKHDKFSSFQRQLNLYGFRKIVRGKEAGGYMHKDFQRGRADLLPHVRRGHMPPCPPQYERKIYGSG 109
BLAST of mRNA_H-paniculata_contig19871.5074.1 vs. uniprot
Match: D8LU68_ECTSI (Heat Shock transcription factor (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU68_ECTSI) HSP 1 Score: 87.0 bits (214), Expect = 4.760e-15 Identity = 36/67 (53.73%), Postives = 49/67 (73.13%), Query Frame = 1
Query: 1 YISDNKFSSFQRQLNLYGFRKVVKGRESGCYMHPSFLRDHPEKLTEVKRGVVPPCPAHYSRKIYGSG 201
+ NK+SSFQRQLNLYGFRK+V+G E+G YMHP F R PE+L++V+RG P P ++ ++G G
Sbjct: 93 FFKQNKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEIPPEFAHDVHGHG 159
BLAST of mRNA_H-paniculata_contig19871.5074.1 vs. uniprot
Match: A0A6H5JIP5_9PHAE (HSF_DOMAIN domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIP5_9PHAE) HSP 1 Score: 83.6 bits (205), Expect = 1.910e-14 Identity = 38/65 (58.46%), Postives = 46/65 (70.77%), Query Frame = 1
Query: 1 YISDNKFSSFQRQLNLYGFRKVVKGRESGCYMHPSFLRDHPEKLTEVKRGVVPPCPAHYSRKIYG 195
Y NKFSSF+RQLNLYG+RKV+KG ++G YMHP F R PE L EVK+G VP H +I+G
Sbjct: 94 YFRHNKFSSFRRQLNLYGYRKVIKGPDAGAYMHPFFQRGRPELLGEVKKGKVPHYEMHGVNEIHG 158
BLAST of mRNA_H-paniculata_contig19871.5074.1 vs. uniprot
Match: D7FGR5_ECTSI (Transcription factor prr1 (Pombe response regulator 1) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGR5_ECTSI) HSP 1 Score: 84.7 bits (208), Expect = 2.400e-14 Identity = 38/65 (58.46%), Postives = 47/65 (72.31%), Query Frame = 1
Query: 1 YISDNKFSSFQRQLNLYGFRKVVKGRESGCYMHPSFLRDHPEKLTEVKRGVVPPCPAHYSRKIYG 195
Y NKFSSF+RQLNLYG+RKV+KG ++G YMHPSF R P+ L EVK+G VP H +I+G
Sbjct: 19 YFRHNKFSSFRRQLNLYGYRKVIKGPDAGAYMHPSFQRGRPDLLGEVKKGKVPHYDMHGVNEIHG 83 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19871.5074.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig19871.5074.1 >prot_H-paniculata_contig19871.5074.1 ID=prot_H-paniculata_contig19871.5074.1|Name=mRNA_H-paniculata_contig19871.5074.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=355bp YISDNKFSSFQRQLNLYGFRKVVKGRESGCYMHPSFLRDHPEKLTEVKRGback to top mRNA from alignment at H-paniculata_contig19871:2591..4646- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig19871.5074.1 ID=mRNA_H-paniculata_contig19871.5074.1|Name=mRNA_H-paniculata_contig19871.5074.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2056bp|location=Sequence derived from alignment at H-paniculata_contig19871:2591..4646- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig19871:2591..4646- >mRNA_H-paniculata_contig19871.5074.1 ID=mRNA_H-paniculata_contig19871.5074.1|Name=mRNA_H-paniculata_contig19871.5074.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2130bp|location=Sequence derived from alignment at H-paniculata_contig19871:2591..4646- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |