mRNA_H-paniculata_contig19773.5034.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig19773.5034.1 vs. uniprot
Match: D7FNL8_ECTSI (Homoserine dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNL8_ECTSI) HSP 1 Score: 346 bits (887), Expect = 2.360e-115 Identity = 168/200 (84.00%), Postives = 186/200 (93.00%), Query Frame = 1
Query: 1 VPCQGISSLTKVDFEYAKMMRSTIKLLGTAMLSPDGDKLSVFVSPVMVPLKHPIASARGPGNIVSVESKNMGTSSFAGPGAGRYPTANSVVNDLVRLGTGKVGKPFPFDKEWELETDFTAGFYMRITCVDDLGIIKRVGELAAENGVSIHAILQNPIEDPSNVDFVVTTDPCRQSQIVGLSNSIGEETWAKNVPLILSLL 600
+ C+GISSLT VDFEYAKMM+STIKLLGTAM SPDG+KLSVFVSPV+VPL HPIASARG GNIVSV+SKNMGT+SF+GPGAGRYPTANSVVND+VRLGTGKVG PFPFDKEWELE+DFT+ FY+RITC DDLGII+RVGELAAENGVSIHAILQNPIED NVDFVVTTDPC+QSQ+ LS+SIG+E WAK VPLIL+LL
Sbjct: 294 IQCKGISSLTSVDFEYAKMMKSTIKLLGTAMRSPDGEKLSVFVSPVLVPLSHPIASARGAGNIVSVDSKNMGTASFSGPGAGRYPTANSVVNDIVRLGTGKVGSPFPFDKEWELESDFTSAFYLRITCSDDLGIIQRVGELAAENGVSIHAILQNPIEDVDNVDFVVTTDPCKQSQVDELSSSIGQEKWAKGVPLILTLL 493
BLAST of mRNA_H-paniculata_contig19773.5034.1 vs. uniprot
Match: A0A835ZAD6_9STRA (Homoserine dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAD6_9STRA) HSP 1 Score: 290 bits (743), Expect = 2.000e-94 Identity = 142/200 (71.00%), Postives = 163/200 (81.50%), Query Frame = 1
Query: 1 VPCQGISSLTKVDFEYAKMMRSTIKLLGTAMLSPDGDKLSVFVSPVMVPLKHPIASARGPGNIVSVESKNMGTSSFAGPGAGRYPTANSVVNDLVRLGTGKVGKPFPFDKEWELETDFTAGFYMRITCVDDLGIIKRVGELAAENGVSIHAILQNPIEDPSNVDFVVTTDPCRQSQIVGLSNSIGEETWAKNVPLILSLL 600
VPCQGIS L+ DFE+A+MMRSTIKLLGTAML+ DG KLSVFVSPV+VPL PIA ARG GNIV V S+N+ T+S++GPGAGR+PTANSVV+D+VR+ G PFP+DK+W ETDFT FY RITC D LGIIKRVGELA ENGVSIHAILQNPIED NVDFVVTT+PCR SQ+ +SI +E WAKN PL +SLL
Sbjct: 230 VPCQGISQLSSADFEFARMMRSTIKLLGTAMLNADGSKLSVFVSPVVVPLTSPIAGARGAGNIVVVNSRNVDTTSYSGPGAGRFPTANSVVSDIVRIARGMATPPFPYDKDWTFETDFTGEFYTRITCKDALGIIKRVGELAEENGVSIHAILQNPIEDRDNVDFVVTTEPCRLSQVESFCSSIAKERWAKNKPLCMSLL 429
BLAST of mRNA_H-paniculata_contig19773.5034.1 vs. uniprot
Match: W7TUB9_9STRA (Homoserine dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUB9_9STRA) HSP 1 Score: 232 bits (591), Expect = 1.410e-71 Identity = 111/200 (55.50%), Postives = 149/200 (74.50%), Query Frame = 1
Query: 1 VPCQGISSLTKVDFEYAKMMRSTIKLLGTAMLSPDGDKLSVFVSPVMVPLKHPIASARGPGNIVSVESKNMGTSSFAGPGAGRYPTANSVVNDLVRLGTGKVGKPFPFDKEWELETDFTAGFYMRITCVDDLGIIKRVGELAAENGVSIHAILQNPIEDPSNVDFVVTTDPCRQSQIVGLSNSIGEETWAKNVPLILSLL 600
+P +GISS+ VDFEYA+++ +TIKLLG A LSPDG KLSV VSP +VP +HPIA G NIV++ S+N+ +SS+ GPGAGRYPTANS+V+DLVRL G VG PFP D+ LE D+T+ FY+R+ D LG+I+ VGE+A +GVSI+AILQNPI DP+++ FVVTT+P R SQ+ ++ I ++ + K PL + L
Sbjct: 225 IPTKGISSVASVDFEYARLLNATIKLLGMAQLSPDGKKLSVAVSPFIVPREHPIAGTNGSTNIVNISSRNLVSSSYIGPGAGRYPTANSIVSDLVRLARGLVGPPFPVDRAMPLEPDYTSRFYIRLRIRDQLGVIRVVGEIAERHGVSIYAILQNPISDPNDIHFVVTTEPARHSQVQAFADDIEKQDFTKGPPLFFAFL 424
BLAST of mRNA_H-paniculata_contig19773.5034.1 vs. uniprot
Match: A0A7S2WAR1_9STRA (Homoserine dehydrogenase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WAR1_9STRA) HSP 1 Score: 225 bits (573), Expect = 6.190e-69 Identity = 106/200 (53.00%), Postives = 148/200 (74.00%), Query Frame = 1
Query: 1 VPCQGISSLTKVDFEYAKMMRSTIKLLGTAMLSPDGDKLSVFVSPVMVPLKHPIASARGPGNIVSVESKNMGTSSFAGPGAGRYPTANSVVNDLVRLGTGKVGKPFPFDKEWELETDFTAGFYMRITCVDDLGIIKRVGELAAENGVSIHAILQNPIEDPSNVDFVVTTDPCRQSQIVGLSNSIGEETWAKNVPLILSLL 600
+P GIS + VDFEYAK+M +T+KLLGTA LSP + LSV+VSPV+VP HP+ASARG N+VSV S N+G+SS+ GPGAGR+PTANSVV+D++R+ PFP + LE D++A FY+RIT D LGII +G +AA+ GVSI ++LQNPI DP+ VDFVVTTD C++SQ+ +++ + + + + PL++ ++
Sbjct: 218 IPTAGISKIDAVDFEYAKLMNATVKLLGTARLSPSKESLSVYVSPVVVPQLHPVASARGATNVVSVASSNLGSSSYVGPGAGRFPTANSVVSDVLRVAMDTTTPPFPLQRTLPLEPDYSACFYVRITVKDQLGIIANIGAIAAKAGVSIFSVLQNPITDPAKVDFVVTTDQCKRSQVQAVADEVSAQLFTVSPPLVMPMV 417
BLAST of mRNA_H-paniculata_contig19773.5034.1 vs. uniprot
Match: A0A7S1Z3Y2_TRICV (Homoserine dehydrogenase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z3Y2_TRICV) HSP 1 Score: 208 bits (529), Expect = 1.630e-63 Identity = 104/205 (50.73%), Postives = 146/205 (71.22%), Query Frame = 1
Query: 1 VPCQGISSLTKVDFEYAKMMRSTIKLLGTAM-LSPDGDK---LSVFVSPVMVPLKHPIASARGPGNIVSVESKNMGTSSFAGPGAGRYPTANSVVNDLVRLGTGKVGK-PFPFDKEWELETDFTAGFYMRITCVDDLGIIKRVGELAAENGVSIHAILQNPIEDPSNVDFVVTTDPCRQSQIVGLSNSIGEETWAKNVPLILSLL 600
+PC GI+ +T VDFEYA+++ T+KL+GTA LS G++ LSV+V+P +VP H +ASARG GN V+V+S N+G +S+ GPGAGRYPTA+SVV D+ R+ G PFP + EL+ D+T+ FY+RI+ D LGI++RVGE+A GVSIH+ILQNPI+D DFVVTT+ C+ SQ+ G+ + E +A+ PL + +L
Sbjct: 108 IPCMGITGVTAVDFEYARLLGCTVKLVGTAARLSKYGERDGALSVYVAPKVVPNSHLLASARGCGNAVAVDSANLGVASYTGPGAGRYPTASSVVADVRRIADGLCPPDPFPLESSIELDNDYTSNFYVRISFADSLGIVRRVGEIAERRGVSIHSILQNPIDDRGAADFVVTTEACKLSQVTGMCEDVAGEDFARGPPLCMPML 312
BLAST of mRNA_H-paniculata_contig19773.5034.1 vs. uniprot
Match: A0A6V1RNX4_HETAK (Homoserine dehydrogenase n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RNX4_HETAK) HSP 1 Score: 209 bits (531), Expect = 7.830e-62 Identity = 107/200 (53.50%), Postives = 141/200 (70.50%), Query Frame = 1
Query: 1 VPCQGISSLTKVDFEYAKMMRSTIKLLGTAMLSPDGDKLSVFVSPVMVPLKHPIASARGPGNIVSVESKNMGTSSFAGPGAGRYPTANSVVNDLVRLGTGKVGKPFPFDKEWELETDFTAGFYMRITCVDDLGIIKRVGELAAENGVSIHAILQNPIEDPSNVDFVVTTDPCRQSQIVGLSNSIGEETWAKNVPLILSLL 600
+PC+GIS++ +DF+YAK M +TIKL G A S +G +LSV+VSPV+VP HP+ASAR NIV V S NMG++S+ GPGAGRYPTANSVVND+VR G G FP D E +E D+ + FY+RI D LG+++ VGELA ++GVSI AILQ PI DP+NVDFVVTT S I S + ++ + P++++LL
Sbjct: 301 IPCKGISAIQSIDFQYAKQMGATIKLAGVADASREG-QLSVYVSPVVVPRTHPLASARMATNIVEVTSDNMGSTSYVGPGAGRYPTANSVVNDVVRAARGLTGTAFPVDAEARIEGDYVSKFYVRIKIRDQLGVVRVVGELAEKHGVSIDAILQLPITDPNNVDFVVTTGQTAVSSIEAFSADVSKQGFTLESPVVMTLL 499
BLAST of mRNA_H-paniculata_contig19773.5034.1 vs. uniprot
Match: A0A7S2KEY7_9STRA (Homoserine dehydrogenase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KEY7_9STRA) HSP 1 Score: 201 bits (511), Expect = 1.820e-59 Identity = 103/207 (49.76%), Postives = 145/207 (70.05%), Query Frame = 1
Query: 1 VPCQGISSLTKVDFEYAKMMRSTIKLLGTAM-LSPDGDK---LSVFVSPVMVPLKHPIASARGPGNIVSVESKNMGTSSFAGPGAGRYPTANSVVNDLVRLGTGKVGKPFPF---DKEWELETDFTAGFYMRITCVDDLGIIKRVGELAAENGVSIHAILQNPIEDPSNVDFVVTTDPCRQSQIVGLSNSIGEETWAKNVPLILSLL 600
+PC GI+ ++ VDFEYAK++ TIKL+GTA LS G+ LSV+V+P +VP+ H +ASARG GN V+V S N+GT+S+ GPGAGRYPTA+SVV D+ R+ G PFP E++ D+T+ FY+RI+ D LGII+ VGELA +GVSI+++LQNPI + DFVVTT+ C+ SQ+V L + I ++ + + PL + +L
Sbjct: 223 IPCSGITQISSVDFEYAKLLGCTIKLVGTAARLSEYGEHDGALSVYVTPKIVPMTHLLASARGSGNAVAVNSSNLGTASYTGPGAGRYPTASSVVADICRVADGSCSAPFPSVTSTSSIEIDNDYTSAFYIRISFQDGLGIIRSVGELAEAHGVSINSVLQNPIRNRMEADFVVTTESCKLSQVVSLCDDIAKQEYCRMPPLSMPIL 429
BLAST of mRNA_H-paniculata_contig19773.5034.1 vs. uniprot
Match: D8LHG9_ECTSI (Homoserine dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHG9_ECTSI) HSP 1 Score: 198 bits (503), Expect = 2.580e-58 Identity = 105/209 (50.24%), Postives = 138/209 (66.03%), Query Frame = 1
Query: 1 VPCQGISSLTKVDFEYAKMMRSTIKLLGTAMLSPDGDKLSVFVSPVMVPLKHPIASARGPGNIVSVESKNMGTSSFAGPGAGRYPTANSVVNDLVRL---GTGKVGKPFPFDKEWELETDFTAGFYMRITCVDDLGIIKRVGELAAENGVSIHAILQN------PIEDPSNVDFVVTTDPCRQSQIVGLSNSIGEETWAKNVPLILSLL 600
VPC GIS+L+ DF AKMM TIKL+GTA L DKL+VFVSPV+VPL P+AS RGPGN+V V S+N+ S +AGPGAGRYPTANSVVND+VRL G PFP ++ ELE DF A FY+R+T D LG++ VG +A+E GVS+H++L+ E+ V VV TD C +SQ+ + + + A P+++S+L
Sbjct: 226 VPCAGISNLSSTDFACAKMMGCTIKLVGTAALGESKDKLAVFVSPVLVPLGGPLASTRGPGNVVVVRSENLTESVYAGPGAGRYPTANSVVNDIVRLARLGAAGTPPPFPLERPLELEPDFEACFYVRVTAADGLGVLSAVGAIASEAGVSVHSVLRGGEGXXXXXEEAGVVSLVVKTDSCLRSQVGAFVDGLKGKKVATADPVVMSIL 434
BLAST of mRNA_H-paniculata_contig19773.5034.1 vs. uniprot
Match: B7G7E3_PHATC (Homoserine dehydrogenase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7E3_PHATC) HSP 1 Score: 194 bits (493), Expect = 8.510e-57 Identity = 106/210 (50.48%), Postives = 138/210 (65.71%), Query Frame = 1
Query: 1 VPCQGISSLTKVDFEYAKMMRSTIKLLGTA--MLSPDGDK-----LSVFVSPVMVPLKHPIASARGPGNIVSVESKNMGTSSFAGPGAGRYPTANSVVNDLVRLGTGKVG-KPFP--FDKEWELETDFTAGFYMRITCVDDLGIIKRVGELAAENGVSIHAILQNPIEDPSNVDFVVTTDPCRQSQIVGLSNSIGEETWAKNVPLILSLL 600
+P GIS++ VDFEYA ++ STIKL+GTA + DGD LSV+VSPVMV K +AS RG GN + V S+NM S+ GPGAGR+PTANSVV D+VR+ G+ PFP + ELE ++ + FY+RI D LGII++ GELA +GVSIHAILQNPI DP + DF VTTDPC S + N + + + ++ PL + LL
Sbjct: 227 IPTAGISNIQAVDFEYAALLHSTIKLVGTARRLTGVDGDDANSSPLSVYVSPVMVSTKDMLASTRGSGNAIVVTSENMNACSYTGPGAGRFPTANSVVADIVRVANGQASVDPFPKVSPEPLELEDNYVSPFYVRIPFRDGLGIIRQTGELAERHGVSIHAILQNPIADPGSADFCVTTDPCPLSNVQAFCNDLAAQNFCRDPPLHMPLL 436
BLAST of mRNA_H-paniculata_contig19773.5034.1 vs. uniprot
Match: A0A7S2R140_9STRA (Homoserine dehydrogenase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R140_9STRA) HSP 1 Score: 193 bits (490), Expect = 5.790e-56 Identity = 103/205 (50.24%), Postives = 141/205 (68.78%), Query Frame = 1
Query: 1 VPCQGISSLTKVDFEYAKMMRSTIKLLGTAM-LSPDGDK---LSVFVSPVMVPLKHPIASARGPGNIVSVESKNMGTSSFAGPGAGRYPTANSVVNDLVRLGTGKVG-KPFPFDKEWELETDFTAGFYMRITCVDDLGIIKRVGELAAENGVSIHAILQNPIEDPSNVDFVVTTDPCRQSQIVGLSNSIGEETWAKNVPLILSLL 600
+PC GIS LT VDFEYAK++ TIKL+GTA LS G+ LSV+V+P +VP H +AS RG GN V+V+S N+G +S+ GPGAGR+PTA+SVV D+ R+ + PFP L++D+T+ FY+RI+ D LGII+R+GEL+ +GVSI++ILQNPI+D DFVVTT+ CR QI L I E + + P+ + +L
Sbjct: 272 IPCLGISQLTSVDFEYAKLLGCTIKLVGTATRLSEYGEHDGALSVYVAPKVVPNSHLLASIRGSGNAVAVDSANLGIASYTGPGAGRFPTASSVVADICRVASNTASIDPFPLHSNIALDSDYTSEFYIRISFSDGLGIIRRIGELSETHGVSINSILQNPIKDKLMADFVVTTEECRLMQIKELCRDIANEDFVRCDPVFMPML 476 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19773.5034.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig19773.5034.1 >prot_H-paniculata_contig19773.5034.1 ID=prot_H-paniculata_contig19773.5034.1|Name=mRNA_H-paniculata_contig19773.5034.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=201bp VPCQGISSLTKVDFEYAKMMRSTIKLLGTAMLSPDGDKLSVFVSPVMVPLback to top mRNA from alignment at H-paniculata_contig19773:2425..4526- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig19773.5034.1 ID=mRNA_H-paniculata_contig19773.5034.1|Name=mRNA_H-paniculata_contig19773.5034.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2102bp|location=Sequence derived from alignment at H-paniculata_contig19773:2425..4526- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig19773:2425..4526- >mRNA_H-paniculata_contig19773.5034.1 ID=mRNA_H-paniculata_contig19773.5034.1|Name=mRNA_H-paniculata_contig19773.5034.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1206bp|location=Sequence derived from alignment at H-paniculata_contig19773:2425..4526- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |