mRNA_H-paniculata_contig197.5014.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig197.5014.1 vs. uniprot
Match: D7G4U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4U7_ECTSI) HSP 1 Score: 350 bits (898), Expect = 3.880e-111 Identity = 158/221 (71.49%), Postives = 189/221 (85.52%), Query Frame = 2
Query: 803 PLSPEEVRQFEEDGFVMLKHAFDPRVAAAGREHLWRRLQAEGITKD-PGTWVIKHHIAEIYGTPTSPKKRRGQPWTNAVSPRLKAAVDQLAGAGTWEMFGCGWWTVTFPGFAEPPWRADGKWHVDGAHFRHYPHSREIGLLPIFLFSDVRPQWGGTALLRGSHKEIAKILWERAGTTGMKGPALSTLAREVLLPAPEQDIIETSGEAGDVMLTHPLLLHAR 1462
PLSPE++R FEE+GFVMLK AFDP VAAA RE LW+RL+ +GI ++ P TWV K I EIYG +SPKKRRG PW A+SP+LK+AV+QLAG +WE FGCGWW VTFPGFA+PPW A+GKWH+DGAHFRHYPHSREIG+LPIFLFSDVR GGTA+LRGSHK++AKILW+RAGTTG+ GP LS+ ARE LLPA + D++ET+G+AGDV+LTHPLLLH+R
Sbjct: 35 PLSPEDIRSFEENGFVMLKRAFDPDVAAACRESLWKRLKGDGIRREEPATWVRKIGIPEIYGISSSPKKRRGHPWKGALSPKLKSAVNQLAGVDSWEEFGCGWWMVTFPGFAQPPWGAEGKWHIDGAHFRHYPHSREIGILPIFLFSDVRKHGGGTAVLRGSHKKVAKILWDRAGTTGLTGPELSSAAREALLPAADDDVVETNGDAGDVLLTHPLLLHSR 255
BLAST of mRNA_H-paniculata_contig197.5014.1 vs. uniprot
Match: A0A0P1B5H3_PLAHL (Phytanoyl-CoA dioxygenase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B5H3_PLAHL) HSP 1 Score: 252 bits (644), Expect = 8.030e-74 Identity = 123/265 (46.42%), Postives = 171/265 (64.53%), Query Frame = 2
Query: 803 PLSPEEVRQFEEDGFVMLKHAFDPRVAAAGREHLWRRLQAEGITKDPGTWVIKHHIAEIYGTPTSPKKRRGQPWTNAVSPRLKAAVDQLAGAGTWEMFGCGWWTVTFPGFAEPPWRADGKWHVDGAHFRHYPHSREIGLLPIFLFSDVRPQWGGTALLRGSHKEIAKILWERAGTTGMKGPALSTLAREVLLPAPEQDIIETSGEAGDVMLTHPLLLHARSTNLAPEEESGVRFMCHPAVPLKHHLDFSGLPKTFSPMQRVLWDS 1597
PL EE++ F DGFV+L+ AF P A RE +W RL +GI KDP TWV +H I E+Y +P W + ++ RLK+A+DQ+ G G WE FG GWW +TFP ++PPW A GKWHVDGA ++H+ S+E GL+ IFLF+D+ P GGTAL GSHK +A++L GMKG A+S AR+ Q+++E +G+AGDVML HP LLHARS NL + VR MC+P V L H ++ + + + +SP+++ + D+
Sbjct: 22 PLDQEEIKSFIHDGFVLLRKAFTPVTARKCRELIWERLAQDGIGKDPSTWVERHGIPELYTVENNPV------WDDVLTRRLKSAIDQICGQGRWEDFGLGWWMITFPEQSKPPWDAAGKWHVDGASYQHHIDSKESGLVAIFLFTDINPGEGGTALSVGSHKNVARLLAVNE-PRGMKGGAVSHEARKF----EHQNVVEVNGKAGDVMLVHPFLLHARSKNLGQKGVDSVRIMCNPNVKLHHRMNLNRVDENYSPVEKAIIDA 275
BLAST of mRNA_H-paniculata_contig197.5014.1 vs. uniprot
Match: G5A5C2_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A5C2_PHYSP) HSP 1 Score: 251 bits (640), Expect = 5.530e-73 Identity = 128/266 (48.12%), Postives = 167/266 (62.78%), Query Frame = 2
Query: 800 PPLSPEEVRQFEEDGFVMLKHAFDPRVAAAGREHLWRRLQAEGITKDPGTWVIKHHIAEIYGTPTSPKKRRGQPWTNAVSPRLKAAVDQLAGAGTWEMFGCGWWTVTFPGFAEPPWRADGKWHVDGAHFRHYPHSREIGLLPIFLFSDVRPQWGGTALLRGSHKEIAKILWERAGTTGMKGPALSTLAREVLLPAPEQDIIETSGEAGDVMLTHPLLLHARSTNLAPEEESGVRFMCHPAVPLKHHLDFSGLPKTFSPMQRVLWDS 1597
PPL + + F DGFV+L AF A RE +W RL +GITKD GTWV +H I E+Y + P+ W V+P+L A+DQL G G WE FG GWW VTFP AEPPW A GKWHVDGA ++H+ S+E GLL IFLFSD+ P GGTAL GSHK +A++L E+ GMKG A+S AR+ ++++E +G+AGDVML HP LLHARS NL + VR MC+P V L H ++ +SP+++ + D+
Sbjct: 34 PPLDQDAIASFVRDGFVLLPGAFPQATAEKCRELIWSRLGQDGITKDSGTWVERHGIPELYTSEDDPE------WVQVVTPKLTRAMDQLCGDGRWEDFGLGWWMVTFPEQAEPPWGAAGKWHVDGASYQHHVDSQESGLLLIFLFSDIGPGEGGTALSVGSHKWVARLL-EKNEPRGMKGGAVSYQARQFR----RREVVEVNGKAGDVMLVHPFLLHARSKNLGQKGVESVRIMCNPNVRLHHRMNLDRADGDYSPVEQAIVDA 288
BLAST of mRNA_H-paniculata_contig197.5014.1 vs. uniprot
Match: K3W8D1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W8D1_GLOUD) HSP 1 Score: 247 bits (631), Expect = 1.190e-71 Identity = 127/263 (48.29%), Postives = 164/263 (62.36%), Query Frame = 2
Query: 803 PLSPEEVRQFEEDGFVMLKHAFDPRVAAAGREHLWRRLQAEGITK-DPGTWVIKHHIAEIYGTPTSPKKRRGQPWTNAVSPRLKAAVDQLAGAGTWEMFGCGWWTVTFPGFAEPPWRADGKWHVDGAHFRHYPHSREIGLLPIFLFSDVRPQWGGTALLRGSHKEIAKILWERAGTTGMKGPALSTLAREVLLPAPEQDIIETSGEAGDVMLTHPLLLHARSTNLAPEEESGVRFMCHPAVPLKHHLDFSGLPKTFSPMQRVL 1588
PL+ E+ F DGFV+LK AF AA RE +WRRL+ +GI K D TWV +H I EIY P W + ++PRL AVDQL G G+WE FGCGWW +TFP A+PPW A GKWHVDGA ++H+ S+E GLL IF FSDV P GGTAL GSH IA++L E+ G+KG A+S AR+ P + ++E +G+AGDVML HP LLHARS NL VR MC+P + L ++ ++P++R +
Sbjct: 43 PLAAREIDAFVRDGFVLLKDAFSEATAAKCRELVWRRLEKDGIRKSDSSTWVERHGIPEIYNGDDDPL------WNDVLTPRLHRAVDQLCGQGSWEEFGCGWWMITFPNQADPPWEAAGKWHVDGASYQHHLDSKESGLLAIFCFSDVGPTEGGTALSVGSHVPIAQLL-EKNQPRGLKGGAVSYNARKF----PRRRVVEVNGKAGDVMLVHPFLLHARSKNLGTRGVDSVRIMCNPNIRLHKKMNLDRADDAYTPVERAI 294
BLAST of mRNA_H-paniculata_contig197.5014.1 vs. uniprot
Match: A0A6A3TT35_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TT35_9STRA) HSP 1 Score: 247 bits (630), Expect = 1.600e-71 Identity = 127/267 (47.57%), Postives = 164/267 (61.42%), Query Frame = 2
Query: 797 NPPLSPEEVRQFEEDGFVMLKHAFDPRVAAAGREHLWRRLQAEGITKDPGTWVIKHHIAEIYGTPTSPKKRRGQPWTNAVSPRLKAAVDQLAGAGTWEMFGCGWWTVTFPGFAEPPWRADGKWHVDGAHFRHYPHSREIGLLPIFLFSDVRPQWGGTALLRGSHKEIAKILWERAGTTGMKGPALSTLAREVLLPAPEQDIIETSGEAGDVMLTHPLLLHARSTNLAPEEESGVRFMCHPAVPLKHHLDFSGLPKTFSPMQRVLWDS 1597
+PPL E + F +GFV+L AF A R+ +W RL +GIT DP TWV +H I E+Y K W V+PRLK A+DQL G G WE FG GWW VTFPG EPPW A GKWHVDGA ++H+ S E GLL IFLFSD+ P GGTAL GSHK +A++L E+ GMKG A+S AR+ ++++E +G+AGDV+L HP LLHARS NL + VR MC+P V L H + +SP+++ + D+
Sbjct: 35 SPPLDQESINSFVRNGFVLLPRAFPQSTADKCRQLIWSRLGQDGITPDPTTWVERHGIPELY------TKEDDSTWGQVVTPRLKQAMDQLCGDGRWEDFGLGWWMVTFPGQTEPPWGAAGKWHVDGASYQHHVDSLESGLLLIFLFSDIGPGEGGTALSVGSHKWVARLL-EKNEPRGMKGGAVSYQARQFR----RREVVEVNGKAGDVVLVHPFLLHARSKNLGQKGVESVRIMCNPNVRLHHKMRLDRADGAYSPVEQAIVDA 290
BLAST of mRNA_H-paniculata_contig197.5014.1 vs. uniprot
Match: H3H2A3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H2A3_PHYRM) HSP 1 Score: 246 bits (629), Expect = 1.900e-71 Identity = 128/266 (48.12%), Postives = 168/266 (63.16%), Query Frame = 2
Query: 800 PPLSPEEVRQFEEDGFVMLKHAFDPRVAAAGREHLWRRLQAEGITKDPGTWVIKHHIAEIYGTPTSPKKRRGQPWTNAVSPRLKAAVDQLAGAGTWEMFGCGWWTVTFPGFAEPPWRADGKWHVDGAHFRHYPHSREIGLLPIFLFSDVRPQWGGTALLRGSHKEIAKILWERAGTTGMKGPALSTLAREVLLPAPEQDIIETSGEAGDVMLTHPLLLHARSTNLAPEEESGVRFMCHPAVPLKHHLDFSGLPKTFSPMQRVLWDS 1597
PPL E + F DGFV+L +AF AA RE +W+RL +GITKDP TWV +H I E+Y P W V+PRLK A+DQ+ G +E FG GWW +TFP AEPPW A GKWHVDGA ++H+ S E GLL IFLFSD+ P GGTA+ GSHK IA++L ER GMKG A+S AR+ ++++E +G+AGDVML HP LLHARS NL + VR MC+P V L+ ++ + +SP+++ + D+
Sbjct: 37 PPLGQEAIASFVRDGFVLLPNAFASSTAAKCRELIWQRLALDGITKDPTTWVERHGIPELYTAEDDPV------WGQVVTPRLKRAMDQICGKNRYEDFGLGWWMITFPDQAEPPWGAAGKWHVDGASYQHHVDSEESGLLLIFLFSDIGPGEGGTAVSVGSHKWIARLL-ERNEPRGMKGGAVSYQARQFA----RREVVEVNGKAGDVMLVHPFLLHARSKNLGLKGVESVRVMCNPNVRLRCKMNLNRADGDYSPVEQAVVDA 291
BLAST of mRNA_H-paniculata_contig197.5014.1 vs. uniprot
Match: A0A0W8C4L5_PHYNI (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C4L5_PHYNI) HSP 1 Score: 246 bits (627), Expect = 3.460e-71 Identity = 122/270 (45.19%), Postives = 170/270 (62.96%), Query Frame = 2
Query: 803 PLSPEEVRQFEEDGFVMLKHAFDPRVAAAGREHLWRRLQAEGITKDPGTWVIKHHIAEIYGTPTSPKKRRGQPWTNAVSPRLKAAVDQLAGAGTWEMFGCGWWTVTFPGFAEPPWRADGKWHVDGAHFRHYPHSREIGLLPIFLFSDVRPQWGGTALLRGSHKEIAKILWERAGTTGMKGPALSTLAREVLLPAPEQDIIETSGEAGDVMLTHPLLLHARSTNLAPEEESGVRFMCHPAVPLKHHLDFSGLPKTFSPMQRVLWDSRPRDG 1612
PL E + F DGFV+L+ AF A R+ +W RL+ +GITKDP TWV +H I E+Y +P W++ V+PRLK A+ Q+ G WE FG GWW +TFP AEPPW A GKWHVDGA ++H+ ++E GLL IFLFSD+ P GGTAL GSHK +A++L ++ GMKG A+S AR+ ++++E +G+AGDV+L HP LLHARS NL + VR MC+P V L ++ + + +SP+++ + D+ G
Sbjct: 28 PLDQEAIDSFTRDGFVLLRDAFSSSTAEKCRDLIWTRLEQDGITKDPSTWVERHGIPELYTAEDNPV------WSDVVTPRLKRAMHQICGKDRWENFGLGWWMITFPDQAEPPWGAAGKWHVDGASYQHHVDNKEAGLLLIFLFSDIGPGEGGTALSVGSHKWVARLL-QKNEPRGMKGGAVSYQARQFR----RREVVEVNGKAGDVVLVHPFLLHARSKNLGQKGVESVRIMCNPNVRLHRRMNLNRVNGDYSPVEQAIVDALEESG 286
BLAST of mRNA_H-paniculata_contig197.5014.1 vs. uniprot
Match: A0A484DV46_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DV46_BRELC) HSP 1 Score: 245 bits (625), Expect = 5.200e-71 Identity = 125/265 (47.17%), Postives = 165/265 (62.26%), Query Frame = 2
Query: 803 PLSPEEVRQFEEDGFVMLKHAFDPRVAAAGREHLWRRLQAEGITKDPGTWVIKHHIAEIYGTPTSPKKRRGQPWTNAVSPRLKAAVDQLAGAGTWEMFGCGWWTVTFPGFAEPPWRADGKWHVDGAHFRHYPHSREIGLLPIFLFSDVRPQWGGTALLRGSHKEIAKILWERAGTTGMKGPALSTLAREVLLPAPEQDIIETSGEAGDVMLTHPLLLHARSTNLAPEEESGVRFMCHPAVPLKHHLDFSGLPKTFSPMQRVLWDS 1597
PL + + F DGFV+L+ AF P A R+ +W RL +GIT+D TWV KH IAE+Y +P W + ++PRLK A+DQ+ G G W FG GWW +TFP +PPW A GKWHVDGA ++H+ S E GLL IFLFSD+ P GGTAL GSHK+IA+IL E+ GMKG A+S AR+ Q+++E +G AGDVML HP LLHARS NL + VR MC+P V L ++ +SP+++ + D+
Sbjct: 25 PLDQQAIDSFIRDGFVLLREAFAPSTAQQCRDLIWLRLAVDGITQDSSTWVEKHGIAELYTPADNPL------WGDVMTPRLKRAIDQICGQGRWADFGLGWWMITFPDQCQPPWDAAGKWHVDGASYQHHVDSNESGLLAIFLFSDIGPGEGGTALSVGSHKQIARIL-EKNEPRGMKGGAVSYEARKYS----RQEVVEVNGLAGDVMLVHPFLLHARSKNLGQKGVHSVRIMCNPNVRLHQRMNLQRSNGDYSPVEQAIVDA 278
BLAST of mRNA_H-paniculata_contig197.5014.1 vs. uniprot
Match: A0A662YJD1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YJD1_9STRA) HSP 1 Score: 245 bits (626), Expect = 9.570e-71 Identity = 126/267 (47.19%), Postives = 164/267 (61.42%), Query Frame = 2
Query: 800 PPLSPEEVRQFEEDGFVMLKHAFDPRVAAAGREHLWRRLQAEGITK-DPGTWVIKHHIAEIYGTPTSPKKRRGQPWTNAVSPRLKAAVDQLAGAGTWEMFGCGWWTVTFPGFAEPPWRADGKWHVDGAHFRHYPHSREIGLLPIFLFSDVRPQWGGTALLRGSHKEIAKILWERAGTTGMKGPALSTLAREVLLPAPEQDIIETSGEAGDVMLTHPLLLHARSTNLAPEEESGVRFMCHPAVPLKHHLDFSGLPKTFSPMQRVLWDS 1597
PPL + F+ DGFV+L AF A R +W RL +GI K DP TWV +H I EIY +P W ++PRLK A+DQL G WE FGCGWW +TFP AEPPW A GKWHVDGA ++H+ S+E GLL +FLFSD+ P GGTAL GSHK IA++L E+ GMKG A+S AR+ + ++E +G+AGDVML HP LLHARS NL + VR MC+P V L ++ + +SP+++ + D+
Sbjct: 48 PPLDANAIASFQRDGFVLLSRAFPESTAQQCRALIWERLVQDGIEKSDPSTWVERHGIPEIYTAEDAPV------WDGVLTPRLKQAMDQLCGRDRWEDFGCGWWMITFPDQAEPPWEAAGKWHVDGAAYQHHLDSKESGLLAVFLFSDIAPGEGGTALSVGSHKWIARLL-EKNEPRGMKGGAVSFQARKFR----REQVVEVNGKAGDVMLVHPFLLHARSKNLGQKGADSVRMMCNPNVRLHQKMNLNRPDGAYSPVEQAIVDA 303
BLAST of mRNA_H-paniculata_contig197.5014.1 vs. uniprot
Match: A0A3M6VBK7_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VBK7_9STRA) HSP 1 Score: 244 bits (623), Expect = 1.140e-70 Identity = 125/265 (47.17%), Postives = 165/265 (62.26%), Query Frame = 2
Query: 803 PLSPEEVRQFEEDGFVMLKHAFDPRVAAAGREHLWRRLQAEGITKDPGTWVIKHHIAEIYGTPTSPKKRRGQPWTNAVSPRLKAAVDQLAGAGTWEMFGCGWWTVTFPGFAEPPWRADGKWHVDGAHFRHYPHSREIGLLPIFLFSDVRPQWGGTALLRGSHKEIAKILWERAGTTGMKGPALSTLAREVLLPAPEQDIIETSGEAGDVMLTHPLLLHARSTNLAPEEESGVRFMCHPAVPLKHHLDFSGLPKTFSPMQRVLWDS 1597
P + + F DGFV+L AF A RE +W+RL +GITKD TWV +H I E+Y + W + V+PRLK AVDQL G W+ FG GWW +TFPG AEPPW A GKWHVDGA ++H+ S+E GLL IFLFSD+ P GGTAL GSHK IA++L ++ GMKG A+S AR+ ++++E +G+AGDVML HP LLHARS NL + VR MC+P V L ++ + FSP+++ + D+
Sbjct: 24 PFDHQAIEAFIRDGFVLLSKAFSTSTAQKCREVIWQRLAQDGITKDSSTWVERHGIPELYTA------KDDIVWKDVVTPRLKQAVDQLCGINKWKDFGLGWWIITFPGQAEPPWEAAGKWHVDGATYQHHVDSQESGLLAIFLFSDIGPGEGGTALSVGSHKRIARML-KKNEPRGMKGGAVSYQARQFQ----RREVVEVNGKAGDVMLVHPFLLHARSKNLGQKGVESVRIMCNPNVQLHRKMNLNRADGDFSPVEQAVVDA 277 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig197.5014.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig197.5014.1 >prot_H-paniculata_contig197.5014.1 ID=prot_H-paniculata_contig197.5014.1|Name=mRNA_H-paniculata_contig197.5014.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=576bp MATTFATEVGTSFGSAIPQKSSMEEHQQPAIDASVAEEEQRDSSPYDHKEback to top mRNA from alignment at H-paniculata_contig197:38176..45418+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig197.5014.1 ID=mRNA_H-paniculata_contig197.5014.1|Name=mRNA_H-paniculata_contig197.5014.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7243bp|location=Sequence derived from alignment at H-paniculata_contig197:38176..45418+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig197:38176..45418+ >mRNA_H-paniculata_contig197.5014.1 ID=mRNA_H-paniculata_contig197.5014.1|Name=mRNA_H-paniculata_contig197.5014.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3456bp|location=Sequence derived from alignment at H-paniculata_contig197:38176..45418+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |