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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Model size | 847 |
| Cds size | 480 |
| Stop | 1 |
| Start | 0 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig19584.4966.1 >prot_H-paniculata_contig19584.4966.1 ID=prot_H-paniculata_contig19584.4966.1|Name=mRNA_H-paniculata_contig19584.4966.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=160bp
PAHIFVLLSGFKKGLLNAADFKVLDDVSASIGRIVTDVRSTVERTDWTPR
FTRAVHKAMTYQNYSAFSVHLTSLDKALQRHRNDVPEGMQPVQRWIDFLL
SQPWPPLLTDMSVDPGMKSFYDAQQRNKKELEEEVQVAIGAFKQKISIGV
DVTFREEKS* back to topmRNA from alignment at H-paniculata_contig19584:1211..4195- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig19584.4966.1 ID=mRNA_H-paniculata_contig19584.4966.1|Name=mRNA_H-paniculata_contig19584.4966.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2985bp|location=Sequence derived from alignment at H-paniculata_contig19584:1211..4195- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCGGCGCATATTTTTGTGTTGCTTAGTGGTTTCAAGAAGGGCTTGCTGAA
CGCCGCGGACTTTAAGGTCCTCGATGACGTTTCGGCATCCATCGGGCGCA
TCGTAACTGACGTGAGATCCACCGTCGAACGCACGGACTGGACACCGCGC
TTCACCCGGTGAGCAATTTCCCGCTGGTATGGTGCCGTTTATACAAGAAG
TGTCATTTTCCTGAATATTTCGGTAGTAGTAGTAGTAGTAGTAGTAGTAG
TAGATTGTACAACTGTCCATCTCCCTCCTTACCTCTCTCTCTTAATCTAT
CGTCTCTCCGATCCGGTATACACGTACCACAGAATGAAGTGGCTATTTGC
TCGTCTCTCATTTGATAGTGCGCATTGCCTCTATTGTGTGCTCTATTTTA
TCTACAGGGCTGTACACAAGGCGATGACGTACCAGAATTACTCGGCGTTC
AGCGTCCACCTTACTTCGTTGGACAAGGCCCTACAACGGCACAGGAACGA
CGTGCCGGAGGGCATGCAGCCTGTTCAGCGATGGATTGATTTCCTGCTAT
CACAGCCCTGGCCCCCACTGCTAACGGTTAGTTGCGAATGGTGTTTCAAA
CGTTTGGTTGATGGTGTAGTGCTTGTATGTGTATATGTTATCGACACAAA
AGGCTGTTGCATGTAAACCGCCCTGTGTTGCGATCCGATGCCCCTTTCGG
AAAAACCTCTCTTTCTGTTTGCAGACAGAATTTACATGGTGCGTAGTAAT
TCGCCGCGTCCCAGCACCGGCTCATACCCGGCAGAAGTCCGTGTGCGTCA
CAGTGTGTTGGTGACTCGCGTGGGCGAGTTGCAACCTTTTGGGGATTCGA
GCGCGTCGGACAAACCTAATATTATACCCCAAGTTTGACAGCGAACCAAA
CGTTGATTTGTTCCATCAACTGCCCCATGCGTTCTGTCCCTGCGTTATCT
TCGTAGGACATGAGCGTGGACCCTGGAATGAAGTCCTTCTACGACGCGCA
GCAAAGAAACAAGAAGGAGCTCGAGGAAGAGGTGCAAGTGGCCATCGGAG
CGTTCAAGCAGAAGATCAGCGAACGTGCAGAAGAAGCGGAAAATCCGCCA
CCGCCGCTGCCGCAGCGAAGGCGCAGAGGTCGCTGCGCCGAGTTTGGCCG
CTGCAGCAGCCGCCGCCGCCGTCGGCAGGAGGAGCTGCCGCTGCTTCGAC
ACCATCTCGTCAGGCTTGGAGCGGTGCTGCATCACAGGGTACGCTGACGG
CGGCAGACCCAGGAGTTTCGGGGCAAGGCAAAGGTGGGGCGCGATGAGGG
TTGGGTGGTTAGGTAGTGCGTTGTGTGCTTCCATGTTGCGTATGAGCTGT
TACGAGTTGGGTGTGTCTTATTTTTCGTCCGTTTCATGTGGTTCTATGAT
AGCATTCCCCAGCTGGAGTTTGATTGGCATCTGTATCGTGACCAAATGTT
AACGAAGACGCCGTTAAACGAAAACCTCTGCAGCAGGACCATCGCGAACG
ACGCGCAGAACAGTGGCGCCGCCCGCGGAAGATGGAAAGATGGCGAGCGC
TAGATACGAAACACTTGGTTTTGTACTTGCATTGCCAGAGTGGGCAAAAG
AGAAAATGTACGACGGATAGATATACATTGATGATGCCGTTTTGGTTTTG
GGAAAGTTGTAGTATCGGTATTGGTGTTGATGTGACATTTCGTGAAGGTG
TGTGTGACTGGCTACTACGGTATGTACAAATATGTTCATGAAAGTATGTG
TGTAATAAACAAACTATAGATTGAACAAAGACACCACCTACATACGTCTA
TATTGATGTGTCATTACCGTCATTGATGTTCAAATATGTAACGTCTACTT
GTCGTAGTTCTGCATGATGTACACAAGTCTAACAGTTCCGCGCGTGACGT
CTGTTCGCTAGAAAAATCATGACGAAGATATTCACCGCGGATGTACTTCA
AGAGGGGTTCGACATGCAGCAACAGGTACTGCATCCGCCGGGCACAAAGG
TCATGTTGGCGTTCTTGATCATCGCGAGCTGTCCTTCAACCATCACTTAC
GGCTGCACTCTGACCTCAGTCCTGAAGAAGGCCTTGATCTTTCTCTCGAA
CAACTTGGACGAGAAGGGCACCATCGCCCTGGCTCTTCCTGACATGTTGT
GTGACAGTTCACATCTGAGAGGTACGTTTGGCGTGATAATGGTGAATCCT
TGTACTCATGTTTTTTTACATTAAAGCCTTGGTCCTTCGTTTTTGGACTG
TATAACGGGTCTCATCGTCTACCTCGAGTAAAATGCAGTGTACTAAAATA
ATACGTTGATCGGGATTGAGAACTTGTGCGCGTTGGCGTGGTGGCTCCTC
AAATAACTTCATTAAGCCGTGTGCCTTGATGTTGAGCGTGGTGTGTGTAC
AGCAGCCTCCCCCCTCCCCACTTTTGTGTTCTATTTTGGGGCCACACCCT
GGGCACCACTGTTGTGCCCCCCAAAAAATAACAACAAATCACCACCACCA
GCCGCCGTAAAATACCCCTGATTATTTGAGGCACCCTCAAGCAGAAACAC
TCTTGGATTTTCCGCACATAAGATCATAACCAATTGCGACGTCGGTATGA
ATGAGAAGCCGCGATATCCTAATACAATATTCGTTTGGTAATTGAACAGC
GAACTGTAGACGGTTGCCGTATCTGTAAATCCCAGTATTTCTAGGCGGTT
GATGTCGGCACTGCGTAGCGCTCGCTAGTGTATGCTGTGCTGCTATTATA
GTAGTAGTGCTCGAATACCAAATTCAAAAATGTGCACCGTTTGTTGTTTT
TGTAGAAGAGGGCAATTCATGATTCATACTCCCGTTACTATGCTGTACTG
CGTTTACGGTGTGTCGCAGCTTTGCTGAAAGAGGCTGGGCTTATCATGGA
GTCCGTGCCTCTCGTCTCACATTATGGTGACGGCCACGCCGGCCGTAAGA
AAAAGAAGCAGAAGCTCATGTTCCCCAACCAGGGC back to topCoding sequence (CDS) from alignment at H-paniculata_contig19584:1211..4195- >mRNA_H-paniculata_contig19584.4966.1 ID=mRNA_H-paniculata_contig19584.4966.1|Name=mRNA_H-paniculata_contig19584.4966.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=960bp|location=Sequence derived from alignment at H-paniculata_contig19584:1211..4195- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCGGCGCATATTTTTGTGTTGCTTAGTGGTTTCAAGAAGGGCTTGCTGAA
CGCCGCGGACTTTAAGGTCCTCGATGACGTTTCGGCATCCATCGGGCGCA
TCGTAACTGACGTGAGATCCACCGTCGAACGCACGGACTGGACACCGCGC
TTCACCCGCCGGCGCATATTTTTGTGTTGCTTAGTGGTTTCAAGAAGGGC
TTGCTGAACGCCGCGGACTTTAAGGTCCTCGATGACGTTTCGGCATCCAT
CGGGCGCATCGTAACTGACGTGAGATCCACCGTCGAACGCACGGACTGGA
CACCGCGCTTCACCCGGGCTGTACACAAGGCGATGACGTACCAGAATTAC
TCGGCGTTCAGCGTCCACCTTACTTCGTTGGACAAGGCCCTACAACGGCA
CAGGAACGACGTGCCGGAGGGCATGCAGCCTGTTCAGCGATGGATTGATT
TCCTGCTATCACAGCCCTGGCCCCCACTGCTAACGGGCTGTACACAAGGC
GATGACGTACCAGAATTACTCGGCGTTCAGCGTCCACCTTACTTCGTTGG
ACAAGGCCCTACAACGGCACAGGAACGACGTGCCGGAGGGCATGCAGCCT
GTTCAGCGATGGATTGATTTCCTGCTATCACAGCCCTGGCCCCCACTGCT
AACGGACATGAGCGTGGACCCTGGAATGAAGTCCTTCTACGACGCGCAGC
AAAGAAACAAGAAGGAGCTCGAGGAAGAGGTGCAAGTGGCCATCGGAGCG
TTCAAGCAGAAGATCAGCGACATGAGCGTGGACCCTGGAATGAAGTCCTT
CTACGACGCGCAGCAAAGAAACAAGAAGGAGCTCGAGGAAGAGGTGCAAG
TGGCCATCGGAGCGTTCAAGCAGAAGATCAGCATTGGTGTTGATGTGACA
TTTCGTGAAGATTGGTGTTGATGTGACATTTCGTGAAGAAAAATCATGAA
AAAATCATGA back to top
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