mRNA_H-paniculata_contig19436.4915.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig19436.4915.1 vs. uniprot
Match: A0A8F0F7B5_9PHAE (ABC transporter domain-containing protein n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F7B5_9PHAE) HSP 1 Score: 254 bits (650), Expect = 4.170e-82 Identity = 129/158 (81.65%), Postives = 142/158 (89.87%), Query Frame = 1
Query: 4 IPILEIKNLHASIEDTKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYILTQGEILFEGKNICDLDPDIRSHLGLFLAFQYPVELTGVGNEAFLKAALTAKRAFEKLPPLNTFEFTNLLLDKIKLIK*NWLSLIKVFFLEMLMKDFQGGKK 477
+PILEIKNLHA+IEDT+ILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSY LT+GEILFEGKNIC+LDPDIRSHLGLFLAFQYPVELTGVGNEAFLKAALTAKRAFEKLPPLNT EFTNLLL+K++++K L K F + + F GG+K
Sbjct: 5 MPILEIKNLHANIEDTQILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYTLTEGEILFEGKNICELDPDIRSHLGLFLAFQYPVELTGVGNEAFLKAALTAKRAFEKLPPLNTLEFTNLLLEKMRMVK-----LEKSFLSRNVNEGFSGGEK 157
BLAST of mRNA_H-paniculata_contig19436.4915.1 vs. uniprot
Match: A0A2I4Q2M5_9PHAE (ABC transporter domain-containing protein n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2M5_9PHAE) HSP 1 Score: 223 bits (568), Expect = 9.440e-70 Identity = 112/166 (67.47%), Postives = 136/166 (81.93%), Query Frame = 1
Query: 1 NIPILEIKNLHASIEDTKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYILTQGEILFEGKNICDLDPDIRSHLGLFLAFQYPVELTGVGNEAFLKAALTAKRAFEKLPPLNTFEFTNLLLDKIKLIK*NWLSLIKVFFLEMLMKDFQGGKKSEMKFYN 498
NIP+LE+KNLHA +++ +ILKGVNLSIF+GEIHAIMGTNGSGKSTLSKIIAGHPSY L +GEILF+GK+IC LDP+ RSHLGLFLAFQYPVELTGV NEAFLKAA+TA+R + LPPLN+ EFT+LLL+K+KL+K L K F + + F GG+K + +
Sbjct: 4 NIPLLEVKNLHAQVDEVEILKGVNLSIFKGEIHAIMGTNGSGKSTLSKIIAGHPSYQLIEGEILFKGKDICLLDPESRSHLGLFLAFQYPVELTGVNNEAFLKAAVTAQRQSKDLPPLNSLEFTSLLLEKLKLVK-----LDKNFLARNVNEGFSGGEKKRNEIFQ 164
BLAST of mRNA_H-paniculata_contig19436.4915.1 vs. uniprot
Match: A0A8F0JZQ3_9PHAE (ABC transporter domain-containing protein n=2 Tax=Phaeophyceae TaxID=2870 RepID=A0A8F0JZQ3_9PHAE) HSP 1 Score: 203 bits (516), Expect = 7.320e-62 Identity = 101/158 (63.92%), Postives = 122/158 (77.22%), Query Frame = 1
Query: 4 IPILEIKNLHASIEDTKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYILTQGEILFEGKNICDLDPDIRSHLGLFLAFQYPVELTGVGNEAFLKAALTAKRAFEKLPPLNTFEFTNLLLDKIKLIK*NWLSLIKVFFLEMLMKDFQGGKK 477
+P+LE+KNLHA I + KILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSY +T+GEILFEGKNICDLDPD+RSHLG+FLAFQYPVE+ GV N+ FL+A AK+ LP +N F LL +K+ ++K L + F + + F GG+K
Sbjct: 7 VPLLEVKNLHAHINNNKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYTITEGEILFEGKNICDLDPDLRSHLGIFLAFQYPVEIAGVDNQEFLQAIYNAKQVSMNLPEVNPLFFYELLREKLSMVK-----LDESFISRNVNEGFSGGEK 159
BLAST of mRNA_H-paniculata_contig19436.4915.1 vs. uniprot
Match: A0A8F0JYB8_MACPY (ABC transporter domain-containing protein n=30 Tax=Laminariales TaxID=2886 RepID=A0A8F0JYB8_MACPY) HSP 1 Score: 200 bits (509), Expect = 8.350e-61 Identity = 100/158 (63.29%), Postives = 124/158 (78.48%), Query Frame = 1
Query: 4 IPILEIKNLHASIEDTKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYILTQGEILFEGKNICDLDPDIRSHLGLFLAFQYPVELTGVGNEAFLKAALTAKRAFEKLPPLNTFEFTNLLLDKIKLIK*NWLSLIKVFFLEMLMKDFQGGKK 477
+P+LEIKNLHA+I+ TKILKGV+L IFEGEIHAIMGTNGSGKSTLSK+IAGHPSY +T+GEILF+G+NICDLDPD+RSHLGLFLAFQYPVE+ GV N+ FL+A AK+ LP +N F LL +K+K++K L + F + + F GG+K
Sbjct: 7 VPLLEIKNLHANIDGTKILKGVDLCIFEGEIHAIMGTNGSGKSTLSKVIAGHPSYEVTEGEILFQGQNICDLDPDLRSHLGLFLAFQYPVEIAGVDNQEFLQAIYNAKQVSMDLPKVNPLFFYELLREKLKMVK-----LDESFISRNVNEGFSGGEK 159
BLAST of mRNA_H-paniculata_contig19436.4915.1 vs. uniprot
Match: A0A6G6D7A2_ECTSI (ABC transporter domain-containing protein n=9 Tax=Ectocarpales TaxID=2877 RepID=A0A6G6D7A2_ECTSI) HSP 1 Score: 197 bits (502), Expect = 9.230e-60 Identity = 99/158 (62.66%), Postives = 122/158 (77.22%), Query Frame = 1
Query: 4 IPILEIKNLHASIEDTKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYILTQGEILFEGKNICDLDPDIRSHLGLFLAFQYPVELTGVGNEAFLKAALTAKRAFEKLPPLNTFEFTNLLLDKIKLIK*NWLSLIKVFFLEMLMKDFQGGKK 477
IP+LEI+NLHA+I + KIL+GVNLSIFEGEIHAIMGTNGSGKSTLSK+IAGHPSY + +GEILF+GKNICDLDPD+RSHLGLFLAFQYPVE+ GV N+ FL+A AK+ LP N F LL +K+K++ +L + F + + F GG+K
Sbjct: 6 IPLLEIRNLHANINNNKILRGVNLSIFEGEIHAIMGTNGSGKSTLSKVIAGHPSYDVIEGEILFQGKNICDLDPDLRSHLGLFLAFQYPVEIAGVDNQEFLEAIYNAKQVSMNLPKANPLFFYELLREKLKMV-----NLDESFISRNVNEGFSGGEK 158
BLAST of mRNA_H-paniculata_contig19436.4915.1 vs. uniprot
Match: A0A120HYF8_9PHAE (SufC n=13 Tax=Sargassaceae TaxID=3014 RepID=A0A120HYF8_9PHAE) HSP 1 Score: 194 bits (494), Expect = 1.400e-58 Identity = 95/158 (60.13%), Postives = 123/158 (77.85%), Query Frame = 1
Query: 4 IPILEIKNLHASIEDTKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYILTQGEILFEGKNICDLDPDIRSHLGLFLAFQYPVELTGVGNEAFLKAALTAKRAFEKLPPLNTFEFTNLLLDKIKLIK*NWLSLIKVFFLEMLMKDFQGGKK 477
+P+LEIKNLHA+I+D+KILKG+NLSIFEGE+HAIMG NGSGKSTLSK+IAGHPSY +T+GEILFEGK+I +L+PD+RSHLGLFLAFQYP+E+ GV N+ FL A AK+ LP +N F L+ +K+K++K L + F + + F GG+K
Sbjct: 7 LPLLEIKNLHANIDDSKILKGINLSIFEGEVHAIMGVNGSGKSTLSKVIAGHPSYSITKGEILFEGKDISNLEPDLRSHLGLFLAFQYPIEIAGVDNQEFLAAIYNAKQLSRDLPKVNPLTFYELVKEKLKMVK-----LDERFISRNVNEGFSGGEK 159
BLAST of mRNA_H-paniculata_contig19436.4915.1 vs. uniprot
Match: A0A8E6D6C7_9PHAE (Iron-sulfur cluster formation ABC transporter n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D6C7_9PHAE) HSP 1 Score: 192 bits (489), Expect = 8.710e-58 Identity = 96/158 (60.76%), Postives = 120/158 (75.95%), Query Frame = 1
Query: 4 IPILEIKNLHASIEDTKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYILTQGEILFEGKNICDLDPDIRSHLGLFLAFQYPVELTGVGNEAFLKAALTAKRAFEKLPPLNTFEFTNLLLDKIKLIK*NWLSLIKVFFLEMLMKDFQGGKK 477
IP+LEIKNLHA+I KIL GVNLSIF G+IHAIMGTNGSGKSTLSKII GHPSY LT+GEILF G+NIC+L+PD RSH+GLFLAFQYPVE+ GVGNE FL+ A AK+ + LP ++ +F ++ +K+++IK + F L + F GG+K
Sbjct: 7 IPLLEIKNLHATINGNKILNGVNLSIFPGQIHAIMGTNGSGKSTLSKIIVGHPSYTLTEGEILFMGQNICELEPDARSHIGLFLAFQYPVEIAGVGNEDFLRLAYNAKQTYFNLPVIDPLDFHMIMQEKLEMIK-----MDPSFLQRNLNEGFSGGEK 159
BLAST of mRNA_H-paniculata_contig19436.4915.1 vs. uniprot
Match: A0A2R4QQ20_9PHAE (Iron-sulfur cluster formation ABC transporter ATP-binding subunit n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QQ20_9PHAE) HSP 1 Score: 190 bits (482), Expect = 9.900e-57 Identity = 95/158 (60.13%), Postives = 120/158 (75.95%), Query Frame = 1
Query: 4 IPILEIKNLHASIEDTKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYILTQGEILFEGKNICDLDPDIRSHLGLFLAFQYPVELTGVGNEAFLKAALTAKRAFEKLPPLNTFEFTNLLLDKIKLIK*NWLSLIKVFFLEMLMKDFQGGKK 477
+P+LEI+NLHA+I D KILKGVNLSI+EGE+HAIMG NGSGKSTLSK+IAGHPSY + +GEILF+GK+I +LDPD+RSHLGLFLAFQYPVE+ G+ N+ FL+A AKR LP +N F LL K+K++K L + F + + F GG+K
Sbjct: 7 VPLLEIRNLHANINDNKILKGVNLSIYEGEVHAIMGINGSGKSTLSKVIAGHPSYNIIKGEILFQGKDISNLDPDLRSHLGLFLAFQYPVEIAGLDNQEFLEAIYNAKRLSMNLPKVNPLFFYELLRKKLKMVK-----LDESFISRNVNEGFSGGEK 159
BLAST of mRNA_H-paniculata_contig19436.4915.1 vs. uniprot
Match: A0A8E5BHM2_9PHAE (FeS cluster assembly suf system ATPase SufC n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E5BHM2_9PHAE) HSP 1 Score: 175 bits (443), Expect = 6.050e-51 Identity = 89/158 (56.33%), Postives = 114/158 (72.15%), Query Frame = 1
Query: 4 IPILEIKNLHASIEDTKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYILTQGEILFEGKNICDLDPDIRSHLGLFLAFQYPVELTGVGNEAFLKAALTAKRAFEKLPPLNTFEFTNLLLDKIKLIK*NWLSLIKVFFLEMLMKDFQGGKK 477
+P+LEIKNLH +I + KILKG++L+IFEGEIHAIMG NGSGKSTLSK+IAGHPSY + +G+ILF+G NI L+P++RSHLGLFLAFQYP+E+ GV N FL++ K+ L N F LLLDKIK ++ L K F + + F GG+K
Sbjct: 5 VPLLEIKNLHVNINEIKILKGIDLTIFEGEIHAIMGKNGSGKSTLSKVIAGHPSYKIVKGDILFKGINISTLEPNLRSHLGLFLAFQYPIEIPGVNNLEFLQSMYNTKQRAMYLSVTNPLNFYELLLDKIKQVQ-----LDKSFLFRNVNEGFSGGEK 157
BLAST of mRNA_H-paniculata_contig19436.4915.1 vs. uniprot
Match: A0A0F6SCQ7_BANFU (Sulfate ABC transporter protein n=1 Tax=Bangia fuscopurpurea TaxID=101920 RepID=A0A0F6SCQ7_BANFU) HSP 1 Score: 174 bits (440), Expect = 1.710e-50 Identity = 88/156 (56.41%), Postives = 115/156 (73.72%), Query Frame = 1
Query: 10 ILEIKNLHASIEDTKILKGVNLSIFEGEIHAIMGTNGSGKSTLSKIIAGHPSYILTQGEILFEGKNICDLDPDIRSHLGLFLAFQYPVELTGVGNEAFLKAALTAKRAFEKLPPLNTFEFTNLLLDKIKLIK*NWLSLIKVFFLEMLMKDFQGGKK 477
ILEIK+LHAS+++ IL+GVNLSI GEIHAIMG NGSGKSTLSK+IAGHP+Y LT G+ILF GK+I +++PD R+ G+FLAFQYPVE+ GV N FL+ AL A+R F+KLP L+ EF L+ +KI L+ + + F + + F GG+K
Sbjct: 5 ILEIKDLHASVDNVPILRGVNLSISSGEIHAIMGPNGSGKSTLSKVIAGHPAYSLTSGDILFFGKSILNMEPDERARAGIFLAFQYPVEIPGVSNADFLRIALNARRKFKKLPELSPLEFFQLITEKINLV-----GMKESFLTRNVNEGFSGGEK 155 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19436.4915.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig19436.4915.1 >prot_H-paniculata_contig19436.4915.1 ID=prot_H-paniculata_contig19436.4915.1|Name=mRNA_H-paniculata_contig19436.4915.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=101bp MGTNGSGKSTLSKIIAGHPSYILTQGEILFEGKNICDLDPDIRSHLGLFLback to top mRNA from alignment at H-paniculata_contig19436:4129..4826+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig19436.4915.1 ID=mRNA_H-paniculata_contig19436.4915.1|Name=mRNA_H-paniculata_contig19436.4915.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=698bp|location=Sequence derived from alignment at H-paniculata_contig19436:4129..4826+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig19436:4129..4826+ >mRNA_H-paniculata_contig19436.4915.1 ID=mRNA_H-paniculata_contig19436.4915.1|Name=mRNA_H-paniculata_contig19436.4915.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=606bp|location=Sequence derived from alignment at H-paniculata_contig19436:4129..4826+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |