mRNA_H-paniculata_contig1931.4879.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1931.4879.1 vs. uniprot
Match: A0A6H5J694_9PHAE (HORMA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J694_9PHAE) HSP 1 Score: 179 bits (455), Expect = 5.910e-55 Identity = 88/123 (71.54%), Postives = 103/123 (83.74%), Query Frame = 1
Query: 1 WLLESELQRLVLVIVGTDSGETLERWTFNVHREERPVLTDGSNNPSTEAPRKSMKKIQGEIRDIIRQITASVTFLPVLSEPCAFDLLVYANTDAKVPTEWEESDPKHIKDSSEVRLRSFTTKV 369
WLLE ELQRLVLVIVGTDSG+TLERWTFNVH+EERP L DGSN + PRKS K I EI+++IRQIT+SVTFLP+L EPC+FDLLVY DA VP+ W++SDP+ IKDSSEV LRSF+TK+
Sbjct: 78 WLLEKELQRLVLVIVGTDSGDTLERWTFNVHKEERPALKDGSN-AGDQQPRKSQKAITQEIQNVIRQITSSVTFLPLLDEPCSFDLLVYTGNDATVPSGWDDSDPRCIKDSSEVSLRSFSTKI 199
BLAST of mRNA_H-paniculata_contig1931.4879.1 vs. uniprot
Match: A0A836CIY9_9STRA (DNA-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIY9_9STRA) HSP 1 Score: 154 bits (390), Expect = 4.710e-45 Identity = 81/124 (65.32%), Postives = 94/124 (75.81%), Query Frame = 1
Query: 1 WLLESELQRLVLVIVGTDSGETLERWTFNVHREERPV-LTDGSNNPSTEAPRKSMKKIQGEIRDIIRQITASVTFLPVLSEPCAFDLLVYANTDAKVPTEWEESDPKHIKDSSEVRLRSFTTKV 369
W+L E+QRLVLVI G +SGE LERW F+V E P L + S N APRKS K I EI+ IIRQITASVTFLP+LSEPCAFDLLVY N A VP +WEESDP++I DSS+V+LRSF+TKV
Sbjct: 84 WMLRDEVQRLVLVISGVESGEALERWAFHVQGEPAPAPLKEASGNAP--APRKSQKDICNEIQAIIRQITASVTFLPLLSEPCAFDLLVYTNKSATVPIQWEESDPRYIADSSQVKLRSFSTKV 205
BLAST of mRNA_H-paniculata_contig1931.4879.1 vs. uniprot
Match: A0A5A8DN77_CAFRO (HORMA domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DN77_CAFRO) HSP 1 Score: 144 bits (364), Expect = 2.950e-41 Identity = 72/123 (58.54%), Postives = 94/123 (76.42%), Query Frame = 1
Query: 1 WLLESELQRLVLVIVGTDSGETLERWTFNVHREERPVLTDGSNNPSTEAPRKSMKKIQGEIRDIIRQITASVTFLPVLSEPCAFDLLVYANTDAKVPTEWEESDPKHIKDSSEVRLRSFTTKV 369
WLLE ++Q+LV+VI G DSGETLERW FN+ + + +T G ++ K +K+IQ EI IIRQITASV+FLP+LSEPCAFDLLVY + DA VP WE+SDP++IKD +++LRSFTT+V
Sbjct: 78 WLLEGKVQKLVVVITGADSGETLERWVFNISPD-KAAVTGGKSSD------KPLKEIQQEIAGIIRQITASVSFLPLLSEPCAFDLLVYTDPDAVVPRAWEDSDPRYIKDGEDMQLRSFTTRV 193
BLAST of mRNA_H-paniculata_contig1931.4879.1 vs. uniprot
Match: A0A7S4MXW1_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4MXW1_9EUKA) HSP 1 Score: 141 bits (356), Expect = 3.030e-40 Identity = 75/123 (60.98%), Postives = 89/123 (72.36%), Query Frame = 1
Query: 1 WLLESELQRLVLVIVGTDSGETLERWTFNVHREERPVLTDGSNNPSTEAPRKSMKKIQGEIRDIIRQITASVTFLPVLSEPCAFDLLVYANTDAKVPTEWEESDPKHIKDSSEVRLRSFTTKV 369
WL + +Q+LVLV+ G DSGETLERW F+V TD S P +A K K+I EI+ IIRQITASVTFLP+L EPC FD+LVY +TD +VP WEESDPK+I +S EVRLRSFTTKV
Sbjct: 68 WLGQGTVQKLVLVVAGQDSGETLERWVFDVE-------TDKSIGPDGKAE-KPEKEIMSEIQAIIRQITASVTFLPLLDEPCTFDMLVYTDTDIQVPKAWEESDPKYITNSDEVRLRSFTTKV 182
BLAST of mRNA_H-paniculata_contig1931.4879.1 vs. uniprot
Match: A0A7S1G3K4_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G3K4_9STRA) HSP 1 Score: 142 bits (357), Expect = 3.380e-40 Identity = 74/123 (60.16%), Postives = 87/123 (70.73%), Query Frame = 1
Query: 1 WLLESELQRLVLVIVGTDSGETLERWTFNVHREERPVLTDGSNNPSTEAPRKSMKKIQGEIRDIIRQITASVTFLPVLSEPCAFDLLVYANTDAKVPTEWEESDPKHIKDSSEVRLRSFTTKV 369
WL E+Q+LV+VI G DSG+ LERW FNV TD S S KS K+IQ EI+ IIRQITASV+FLP+L EPC FDLLVY + D VP WEESDP++I +S+EVRLRSFTTKV
Sbjct: 78 WLSRGEVQKLVVVITGVDSGDVLERWVFNVE-------TDKSITASGGGVEKSAKEIQKEIQAIIRQITASVSFLPLLDEPCTFDLLVYTDADTDVPRSWEESDPQYISNSTEVRLRSFTTKV 193
BLAST of mRNA_H-paniculata_contig1931.4879.1 vs. uniprot
Match: A0A2R5FZ78_9STRA (Mitotic spindle assembly checkpoint protein MAD2A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FZ78_9STRA) HSP 1 Score: 141 bits (356), Expect = 4.920e-40 Identity = 71/123 (57.72%), Postives = 91/123 (73.98%), Query Frame = 1
Query: 1 WLLESELQRLVLVIVGTDSGETLERWTFNVHREERPVLTDGSNNPSTEAPRKSMKKIQGEIRDIIRQITASVTFLPVLSEPCAFDLLVYANTDAKVPTEWEESDPKHIKDSSEVRLRSFTTKV 369
WL+E +Q+LVLVI G +S E LERW FNV ++ T NP EA +K K+I EI+ IIRQITASVTFLP+L+EPC FDLLV+ + D +VP WEESDP+HI D+++V+LRSFTTK+
Sbjct: 75 WLMEGTVQKLVLVITGVESKEVLERWVFNVEADKSVTAT---GNP-LEAKQKPRKEIMNEIQAIIRQITASVTFLPLLNEPCTFDLLVHTDCDTEVPQTWEESDPRHIADATDVKLRSFTTKI 193
BLAST of mRNA_H-paniculata_contig1931.4879.1 vs. uniprot
Match: A0A6T8FYY7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8FYY7_9STRA) HSP 1 Score: 141 bits (355), Expect = 6.050e-40 Identity = 73/136 (53.68%), Postives = 96/136 (70.59%), Query Frame = 1
Query: 1 WLLESELQRLVLVIVGTDSGETLERWTFNVHREER-------------PVLTDGSNNPSTEAPRKSMKKIQGEIRDIIRQITASVTFLPVLSEPCAFDLLVYANTDAKVPTEWEESDPKHIKDSSEVRLRSFTTKV 369
WLLE +QRLV+V+ G DSGETLERW FNV E + P + S P+ + +KS+++I EI+ IIRQ+TASVTFLP+L+EPC+FDLLVY + A VPT+W+ESDP++I +S EV+LRSFTT V
Sbjct: 56 WLLEGNVQRLVVVVTGIDSGETLERWQFNVCVENKDDEAGFGKGDENLPQNSSASRKPTDQ--KKSIREIHNEIQAIIRQVTASVTFLPLLNEPCSFDLLVYTDKSAVVPTKWQESDPRYIMNSQEVKLRSFTTTV 189
BLAST of mRNA_H-paniculata_contig1931.4879.1 vs. uniprot
Match: A0A7S2R2B9_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R2B9_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.060e-39 Identity = 74/135 (54.81%), Postives = 97/135 (71.85%), Query Frame = 1
Query: 1 WLLESELQRLVLVIVGTDSGETLERWTFNVH--REERPVLTDGS----------NNPSTEAPRKSMKKIQGEIRDIIRQITASVTFLPVLSEPCAFDLLVYANTDAKVPTEWEESDPKHIKDSSEVRLRSFTTKV 369
WL++ +QRLV+V+ G DSGETLERW FNV +E +D S +N +T KS+K+I EI+ IIRQITASVTFLP+L+EPC+FDLLVYA+ DA VP +W++SDP++I +S EV+LRSFTT V
Sbjct: 75 WLIDGNVQRLVVVVTGLDSGETLERWQFNVSVDGDETKGASDNSQPGDENSSGVSNVTTNKSGKSIKQIHNEIQAIIRQITASVTFLPLLNEPCSFDLLVYADMDAVVPKKWQDSDPQYIMNSQEVKLRSFTTSV 209
BLAST of mRNA_H-paniculata_contig1931.4879.1 vs. uniprot
Match: A0A812XQS1_9DINO (MAD2L1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812XQS1_9DINO) HSP 1 Score: 140 bits (353), Expect = 2.360e-39 Identity = 73/123 (59.35%), Postives = 94/123 (76.42%), Query Frame = 1
Query: 1 WLLESELQRLVLVIVGTDSGETLERWTFNVHREERPVLTDGSNNPSTEAPRKSMKKIQGEIRDIIRQITASVTFLPVLSEPCAFDLLVYANTDAKVPTEWEESDPKHIKDSSEVRLRSFTTKV 369
WL +Q+LV+VI G +SG+TLERW FN+ + + V DG P E KS+K+IQ EI+ +IRQITA+VTFLP+L EPCAFDLLVY + +A+VP WEESDP++I +S+EVRLRSFTTKV
Sbjct: 99 WLTLGSIQKLVVVINGIESGDTLERWVFNIETD-KGVKADG---PGKE---KSLKEIQAEIQAVIRQITATVTFLPLLDEPCAFDLLVYTDKEAEVPKTWEESDPQYIVNSTEVRLRSFTTKV 214
BLAST of mRNA_H-paniculata_contig1931.4879.1 vs. uniprot
Match: M4C3C3_HYAAE (HORMA domain-containing protein n=5 Tax=Peronosporaceae TaxID=4777 RepID=M4C3C3_HYAAE) HSP 1 Score: 139 bits (350), Expect = 3.650e-39 Identity = 71/123 (57.72%), Postives = 90/123 (73.17%), Query Frame = 1
Query: 1 WLLESELQRLVLVIVGTDSGETLERWTFNVHREERPVLTDGSNNPSTEAPRKSMKKIQGEIRDIIRQITASVTFLPVLSEPCAFDLLVYANTDAKVPTEWEESDPKHIKDSSEVRLRSFTTKV 369
WLL+ E+Q+LVLVI G ++ E +ERW F VH E + G S KS K+I EI+ IIRQITASV+FLP+L E CAFDLLVY + +++VP WEESDP++IKDS+EVRLRSF+TKV
Sbjct: 75 WLLKGEVQKLVLVITGIETQEVVERWAFEVHAENGGTIDSGGAPTS-----KSKKEIMAEIQAIIRQITASVSFLPLLEEQCAFDLLVYTDKNSEVPPLWEESDPRYIKDSAEVRLRSFSTKV 192 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1931.4879.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1931.4879.1 >prot_H-paniculata_contig1931.4879.1 ID=prot_H-paniculata_contig1931.4879.1|Name=mRNA_H-paniculata_contig1931.4879.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=123bp WLLESELQRLVLVIVGTDSGETLERWTFNVHREERPVLTDGSNNPSTEAPback to top mRNA from alignment at H-paniculata_contig1931:1077..3222+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1931.4879.1 ID=mRNA_H-paniculata_contig1931.4879.1|Name=mRNA_H-paniculata_contig1931.4879.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2146bp|location=Sequence derived from alignment at H-paniculata_contig1931:1077..3222+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1931:1077..3222+ >mRNA_H-paniculata_contig1931.4879.1 ID=mRNA_H-paniculata_contig1931.4879.1|Name=mRNA_H-paniculata_contig1931.4879.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=738bp|location=Sequence derived from alignment at H-paniculata_contig1931:1077..3222+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |