mRNA_H-paniculata_contig1918.4818.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1918.4818.1 vs. uniprot
Match: D7FKY3_ECTSI (Outer dynein arm docking complex protein oda-dc n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKY3_ECTSI) HSP 1 Score: 453 bits (1165), Expect = 1.680e-151 Identity = 281/442 (63.57%), Postives = 314/442 (71.04%), Query Frame = 1
Query: 1 MVDDKEKTRREIELLKQEIVKDLEAFRGEFQGMSDGLAAAKTATQETNANLEYMTRSRTIPVTGEDSVTANGGGESDASVEK-------------PGSAGVQSLSRTQRLRQQSNMSFWLILKKKNDLQAKAERVQELRAVLERISVATSLATLDDFVPVMLEAEDENYNLFKLINELNRELEELDREKGRINDEIDRLTQAGKKRDQQAVKMSLQQQIDRSRVTAEIYDRAYSRDVEVIKSIEDSLISVFNKVGSSDKAVSKQLLAMGVTDRSILMFLAQIEEQIEHIVQVYNAATDSNAVSNVRRPSTPVVNQTTGERVPSMCPPHPPSSDNIDDT---LGTAPTEEDPDGCYRPINTARVPVRIKEQVLRLPQGTSSNKSGA------------VGKGGHKGRQGS---FTAGQSGRIKVANVGSPPDK----FVGTVD 1221
MVDDKEKTRREIE+LKQE+VKDLE+FR EFQGM++ LAAAK ATQE+NA LEYMTRSR P GED GES PG+ VQ LSR +RL QQS MSFWLILKKKNDLQAKA RVQELRA+LE+IS ATSL TLDDFVPVMLEAEDENYNLFKLINELN+E AG K+ QQAVK+SLQQQIDR R TA+ +DRAY RDVE IKSIE+SLISVFNKVGSSDKA SKQL+AMGVTDR+IL+FLAQIEEQI++IVQVYNAATDS AV NVRRPSTPVVNQ+TGERVPSMC PHPPSSD IDDT + A EED DG +RPINTARV V +KEQVLR+PQG NK+G +G G GR T S + + VG PP+K +G +D
Sbjct: 216 MVDDKEKTRREIEVLKQEVVKDLESFREEFQGMTESLAAAKEATQESNAKLEYMTRSRP-PGAGEDEE-----GESXXXXXXXXXXXXXXXXGGPPGAGEVQPLSRAKRLHQQSIMSFWLILKKKNDLQAKAARVQELRAMLEKISAATSLTTLDDFVPVMLEAEDENYNLFKLINELNKE--------------------AGSKKSQQAVKLSLQQQIDRYRSTAKDHDRAYGRDVEAIKSIEESLISVFNKVGSSDKAASKQLIAMGVTDRNILLFLAQIEEQIDYIVQVYNAATDSTAVPNVRRPSTPVVNQSTGERVPSMCAPHPPSSDTIDDTPLGMSAAAAEEDADGAFRPINTARVAVSMKEQVLRMPQGI--NKAGGGXXXXXXVKGVKIGDGNFSGRAAKTADMTVCASLCMGLRKVGLPPEKSPSGIIGVMD 629
BLAST of mRNA_H-paniculata_contig1918.4818.1 vs. uniprot
Match: A0A835Z6M1_9STRA (Plastocyanin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6M1_9STRA) HSP 1 Score: 196 bits (498), Expect = 3.330e-51 Identity = 130/332 (39.16%), Postives = 197/332 (59.34%), Query Frame = 1
Query: 7 DDKEKTRREIELLKQEIVKDLEAFRGEFQGMSDGLAAAK--TATQETNANLEYMTRSRTIPVTGEDSVTANGGGESDASVEKPGSAGVQSLSRTQRLRQQSNMSFWLILKKKNDLQAKAERVQELRAVLERISVATSLATLDDFVPVMLEAEDENYNLFKLINELNRELEELDREKGRINDEIDRLTQAGKKRDQQAVKMSLQQQIDRSRVTAEIYDRAYSRDVEVIKSIEDSLISVFNKVGSSDK---AVSKQLLAMGVTDRSILMFLAQIEEQIEHIVQVYNAATDSNAVS--NVRRPSTPVVNQTTGERVPSMCPPHPPSSDNIDDTLG 981
D +E RRE E L+QEIV+DL AF ++G++ L +A E++A L + R ++ S++ + RL+QQS ++W IL KK+DL AKA R QEL L++I A+ +L++FVP M+EAE+E Y+LF+LINELNRELEELD E+ R+ D L +A ++ A K L+ QI +R A ++RAY R ++V++S+E+ L +V +K+ + + V+ L G+TDR++L +L +E ++E + Q+Y AAT + NVRRP+TP + TG RVPS+ PHPP+SD I++TLG
Sbjct: 196 DAREGVRRETETLRQEIVRDLHAFSDAYEGVTGQLGGGGGVSAAAESHARLHRLVREQSXXXXXXXXXXXXXXXXXXXXXXXXXXX-XGSVTNSMRLKQQSLNAYWAILNKKSDLVAKAARAQELEDALQQICAASQGGSLEEFVPAMVEAEEEGYSLFRLINELNRELEELDAERARMAAAADALRRADAS-EKSAAKAELRAQIAGARARAADHERAYQRGLDVVRSVEEPLAAVLSKLCAPAEDVGGVTHALSTTGLTDRNVLAYLGVMEAEVERVAQIYTAATSGGTATAANVRRPTTPKWDPATGARVPSLRTPHPPASDTIEETLG 525
BLAST of mRNA_H-paniculata_contig1918.4818.1 vs. uniprot
Match: A0A7S1UCH1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCH1_9STRA) HSP 1 Score: 135 bits (340), Expect = 4.120e-31 Identity = 88/288 (30.56%), Postives = 160/288 (55.56%), Query Frame = 1
Query: 10 DKEKTRREIELLKQEIVKDLEAFRGEFQGMSDGLAAAKTATQETNANLEYMTRSRTIPVTGEDSVTANGGGESDASVEKPGSAGVQSLSRTQRLRQQSNMSFWLILKKKNDLQAKAERVQELRAVLERISVATSLATLDDFVPVMLEAEDENYNLFKLINELNRELEELDREKGRINDEIDRLTQ--AGKKRDQQAVKMSLQQQIDRSRVTAEIYDRAYSRDVEVIKSIEDSLISVFNKVGSSDKAVSKQLLAMGVTDRSILMFLAQIEEQIEHIVQVYNAATDSNAV 867
DK+ +R E L+ +I +DL+AF GE++ M + E +N S + G + GGE E +G+Q + LR+ +W I K+K DL+ + EL L+R+ +T + + + +P++ +E++NY+L+ +IN+L +E+EEL+ EK ++ E+ + A + ++Q +K L++QI +SR+ E D Y+R E + D + ++FNKVG +D+ +++QL + G+TDR+I++FL IE+++ IVQ+YN +N +
Sbjct: 189 DKDNVQRATEALRTQISEDLDAFNGEYETMLRDIKEQSVFNSEIMSNAGRGAHSPFAALQGSPN---RPGGEGKKDTE----SGIQ----LEVLRKSVAKQYWGIAKRKLDLEELDTNIVELEGNLDRLKSSTGVTDVKELIPILQSSEEQNYSLYNMINDLTKEMEELEVEKQTLDKEMSKYQDIAALQAENRQRIKRDLEEQIRKSRMQTEKNDLDYARGGEKLHLCTDGISNIFNKVGCNDEGLAQQLTSTGITDRNIMVFLGAIEDRVNEIVQLYNVLVANNTI 465
BLAST of mRNA_H-paniculata_contig1918.4818.1 vs. uniprot
Match: A0A485LKB0_9STRA (Aste57867_20700 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKB0_9STRA) HSP 1 Score: 110 bits (275), Expect = 1.280e-22 Identity = 77/282 (27.30%), Postives = 148/282 (52.48%), Query Frame = 1
Query: 7 DDKEKTRREIELLKQEIVKDLEAFRGEFQGMSDGLAAAKT---ATQETNANLEYMTRSRTIPVTGEDSVTANGGGESDASVEKPGSAGVQSLSRTQRLRQQSNMSFWLILKKKNDLQAKAERVQELRAVLERISVATSLATLDDFVPVMLEAEDENYNLFKLINELNRELEELDREKGRINDEIDRLTQAGKKRDQQAVKMSLQQQIDRSRVTAEIYDRAYSRDVEVIKSIEDSLISVFNKVGSSDKAVSKQLLAMGVTDRSILMFLAQIEEQIEHIVQVYN 843
D +++ +R++E L+ + + F E+ + D + + A+Q A+ YM G+D G DA +LR ++ + WLI K+ DL+ +AER++ L +I T + + + ++ AE++N++LF +INELN E+E ++ E R + ID +G ++ +K SL++QI++S+ A ++ + VI SI+ +++F+K+G +D+ + +QL + G+TD ++L FL IE+++ IVQ++N
Sbjct: 159 DARDRAQRQVEALRLQTADETARFEAEWNDLKDVIEVDRAHLRASQHHGASSMYMD--------GDDDDNGRESGTPDA-----------------KLRDETLKTSWLISAKEADLRKQAERLKAYEDGLAKIRKKTGIKDIGELANALMAAEEKNFSLFNMINELNTEMEAVEIENNRFQEMIDECKGSGSDLNRARIKASLEEQIEKSKQKAAHFEAKVGESMAVIDSIKTGAMNIFHKIGYNDEVLVQQLNSTGLTDINMLKFLGIIEKRVGEIVQMHN 415
BLAST of mRNA_H-paniculata_contig1918.4818.1 vs. uniprot
Match: A0A1V9ZGL4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZGL4_9STRA) HSP 1 Score: 108 bits (270), Expect = 5.760e-22 Identity = 63/197 (31.98%), Postives = 116/197 (58.88%), Query Frame = 1
Query: 286 RLRQQSNMSFWLILKKKNDLQAKAERVQELRAVLERISVATSLATLDDFVPVMLEAEDENYNLFKLINELNRELEELDREKGRINDEIDRLTQAGKKRDQQAVKMSLQQQIDRSRVTAEIYDRAYSRDVEVIKSIEDSLISVFNKVGSSDKAVSKQLLAMGVTDRSILMFLAQIEEQIEHIVQVYNAATDSNAVSNV 876
+LR + + WLI K DL+ + ER++ L +I T + + + ++ AE++N++LF +INELN E+E ++ E R D I + G ++ +K SL++QI++SR+ A ++ + VI SI+ +++F+K+G +D+A+ +QL + G+TD ++L FL IE++I IVQ++N + S +
Sbjct: 229 KLRDDTLKASWLISAKDADLRKQTERLRAYEDGLAKIRKKTGIKDVGELASALIAAEEKNFSLFNMINELNTEMESVEIENNRFQDMIKEVQGCGSDLNRARIKASLEEQIEKSRIKANHFEARAAESNAVIDSIKAGAMNIFHKIGYNDEALMQQLNSTGLTDINMLKFLGIIEKRIGEIVQMHNIVYTQSGGSKI 425
BLAST of mRNA_H-paniculata_contig1918.4818.1 vs. uniprot
Match: A0A5D6Y3C8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3C8_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.090e-21 Identity = 80/293 (27.30%), Postives = 161/293 (54.95%), Query Frame = 1
Query: 7 DDKEKTRREIELLKQEIVKDLEAFRGEFQGMSDGLAAAKTATQETNANLEYMTRSRTIPVTGEDSVTANGGGESDAS--VEKPGSA--GVQSLSRTQ-RLRQQSNMSFWLILKKKNDLQAKAERVQELRAVLERISVATSLATLDDFVPVMLEAEDENYNLFKLINELNRELEELDREKGRINDEIDRLTQAGKKRD--QQAVKMSLQQQIDRSRVTAEIYDRAYSRDVEVIKSIEDSLISVFNKVGSSDKAVSKQLLAMGVTDRSILMFLAQIEEQIEHIVQVYNAATDSNA 864
D +++ R+ + ++ ++ +D + F +G K ++ AN+ + R RT G N G AS V GSA G + LS +LR ++ + WL+ +K++DL+ ++ER++ + L +I T + ++ ++ AE++N++LF +IN+LN E+E L+ E + + I++ +G D +Q +K L+ QI++S+ ++ + E ++ +++ S+F+K+G SD+A ++QL + GVTD +++ L IE++I +V ++N AT++ A
Sbjct: 201 DARDRANRQADSIRAQLAEDGDEFE-------NGWVEKKVQLEQDRANIRDIPRLRTPKSPG------NRAGRLGASSGVGLTGSAPGGFKLLSTPDVKLRDETLKNVWLLNEKESDLRRQSERLKAVEDGLTKIKKKTGVQDAEELAKALISAEEKNFSLFNMINQLNTEMEALEIENNEVEELIEQCRGSGHNSDSYRQELKTHLEDQIEKSKQKVAFFELRHGESAEAMEMMKNGATSIFHKLGQSDEAFAQQLASHGVTDVAMVKLLGVIEQRIGELVDIHNIATNAPA 480
BLAST of mRNA_H-paniculata_contig1918.4818.1 vs. uniprot
Match: W4FFA6_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FFA6_9STRA) HSP 1 Score: 107 bits (267), Expect = 1.320e-21 Identity = 62/186 (33.33%), Postives = 114/186 (61.29%), Query Frame = 1
Query: 286 RLRQQSNMSFWLILKKKNDLQAKAERVQELRAVLERISVATSLATLDDFVPVMLEAEDENYNLFKLINELNRELEELDREKGRINDEIDRLTQAGKKRDQQAVKMSLQQQIDRSRVTAEIYDRAYSRDVEVIKSIEDSLISVFNKVGSSDKAVSKQLLAMGVTDRSILMFLAQIEEQIEHIVQVYN 843
+LR ++ + WLI K+ DL+ + ER++ L +I T + + + ++ AE++N++LF +INELN E+E ++ E R D I +G ++ +K SL++QID+S+ A ++ S + VI SI+ +++F+K+G +D+ + +QL + G+TD ++L FL IE++I IVQ++N
Sbjct: 223 KLRDETLKTSWLISAKEADLRKQTERLKAYEDGLAKIRKKTGIKDIGELANALMSAEEKNFSLFNMINELNTEMEAVEIENNRFQDMIVECQGSGSDINRARIKASLEEQIDKSKQKAAHFEGRVSESMAVIDSIKTGAMNIFHKIGYNDEVLLQQLNSTGLTDINMLKFLGIIEKRIGEIVQMHN 408
BLAST of mRNA_H-paniculata_contig1918.4818.1 vs. uniprot
Match: A0A067CVV9_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067CVV9_SAPPC) HSP 1 Score: 107 bits (267), Expect = 1.400e-21 Identity = 62/186 (33.33%), Postives = 113/186 (60.75%), Query Frame = 1
Query: 286 RLRQQSNMSFWLILKKKNDLQAKAERVQELRAVLERISVATSLATLDDFVPVMLEAEDENYNLFKLINELNRELEELDREKGRINDEIDRLTQAGKKRDQQAVKMSLQQQIDRSRVTAEIYDRAYSRDVEVIKSIEDSLISVFNKVGSSDKAVSKQLLAMGVTDRSILMFLAQIEEQIEHIVQVYN 843
+LR + + WLI K DL+ + ER++ L ++ T + + + +L AE++N++LF +INELN E+E ++ E R D I+ + G ++ +K SL+ QI++S V A ++ + VI+SI+ +++F+K+G +D+A+ +QL + G+TD ++L FL IE++I IVQ++N
Sbjct: 229 KLRDDTMKASWLIAAKDADLRKQTERLKAYEDGLAKVRKKTGIKDIGELASALLAAEEKNFSLFNMINELNTEMESVEIENNRFQDMINEVQGCGSDLNRARIKASLEAQIEKSHVKAMHFEARAAESNAVIESIKAGAMNIFHKIGYNDEALLQQLNSTGLTDINMLKFLGIIEKRIGEIVQMHN 414
BLAST of mRNA_H-paniculata_contig1918.4818.1 vs. uniprot
Match: A0A2D4C681_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C681_PYTIN) HSP 1 Score: 106 bits (264), Expect = 4.300e-21 Identity = 74/289 (25.61%), Postives = 157/289 (54.33%), Query Frame = 1
Query: 4 VDDKEKTRREIELLKQEIVKDLEAFRGEFQGMSDGLAAAKTATQETNANLEYMTRSRTIPVTGEDSVTANGGGESDASVEKPGSAGVQSLSRTQ-RLRQQSNMSFWLILKKKNDLQAKAERVQELRAVLERISVATSLATLDDFVPVMLEAEDENYNLFKLINELNRELEELDREKGRINDEIDRLTQAGKKRD--QQAVKMSLQQQIDRSRVTAEIYDRAYSRDVEVIKSIEDSLISVFNKVGSSDKAVSKQLLAMGVTDRSILMFLAQIEEQIEHIVQVYNAATDSN 861
+D +++ R+ E+L+ ++ +D E F +Q K + AN+ + R RT ++ + G + + GS LS +LR ++ + WL+ +K+NDL+ ++ER++ + L +I T ++ ++ +L AE++N++LF LIN+LN E+E ++ E + I+ +G D + +K L+ QI++S+ ++ + E +++++ +++++KVG SD+A ++QL + GVT+ ++ L IE++I +V ++N AT+++
Sbjct: 172 LDSRDRANRQTEMLRAQLHEDDEEFEAGWQ-------EKKMIIDQDRANIRDIPRLRTPKSPNRHAMPSVRGRLLPSDLSGTGSPAFSLLSTPDIKLRDETMKNVWLLNEKENDLRRQSERLKTVEDGLTKIKKKTGVSDAEELAQALLTAEEKNFSLFNLINDLNTEMESIEIENNELEQMIESCKGSGTHSDAHRAQLKKQLEDQIEKSKQKVSFFELRQAESSEAMEAMKVGALNIYHKVGHSDEAFAQQLTSHGVTEANMHKLLGIIEQRIGELVDIHNIATNAH 453
BLAST of mRNA_H-paniculata_contig1918.4818.1 vs. uniprot
Match: F0Y881_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y881_AURAN) HSP 1 Score: 106 bits (264), Expect = 4.360e-21 Identity = 82/295 (27.80%), Postives = 157/295 (53.22%), Query Frame = 1
Query: 289 LRQQSNMSFWLILKKKNDLQAKAERVQELRAVLERISVATSLAT-------------LDDFVPVMLEAEDENYNLFKLINELNRELEELDREKGRINDEIDRLTQAGKKR--DQQAVKMSLQQQIDRSRVTAEIYDRAYSRDVEVIKSIEDSLISVFNKVGSSDKAVSKQLLAMGVTDRSILMFLAQIEEQIEHIVQVYNAATDSNAVSNVRRPSTPVVNQTTGERVPSMCPPHPPSSDNIDDTLGTAP----TEEDPDGCY--RPINTARVPVRIKEQVLRLPQGTSSNKSGAV 1110
L+Q+ N ++W++ K + DL + ER +EL + ++I T L+ VP++L++E+ENY +F+ INELN+ELE L+ EK + D++++ A + R ++ +K L Q+ S T + ++ + + + + S +++ ++F+K+G + + L+A G+T+R++ FL IE+Q+ ++Q+ T S + RP TP N+ G+R+P+M P +D +L +AP T+E PD PI+ +++ +K + +G + G V
Sbjct: 233 LQQEVNKAYWVVAKTRMDLTKQIERKEELHSAFDKICSETKTHVDPSADPALKGKHPLEGLVPLLLKSEEENYLVFRTINELNQELETLELEKVSLEDDMEQRALANEDRLHQEENMKKELGAQLATSEATEKTHEDQHRANEQSLISASEAVTTIFHKLGCGEIPSGEALVATGLTERNVEQFLGLIEDQLVEVLQLDAHLTASRGNEDPTRPKTPKFNRD-GKRMPAMTLPDLLHQPQLDASL-SAPFDDATDESPDDAAFAAPIDPSKLLNSLKSGAVDDGKGRNDTAKGHV 525 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1918.4818.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1918.4818.1 >prot_H-paniculata_contig1918.4818.1 ID=prot_H-paniculata_contig1918.4818.1|Name=mRNA_H-paniculata_contig1918.4818.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=427bp MVDDKEKTRREIELLKQEIVKDLEAFRGEFQGMSDGLAAAKTATQETNANback to top mRNA from alignment at H-paniculata_contig1918:6962..14544+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1918.4818.1 ID=mRNA_H-paniculata_contig1918.4818.1|Name=mRNA_H-paniculata_contig1918.4818.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7583bp|location=Sequence derived from alignment at H-paniculata_contig1918:6962..14544+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1918:6962..14544+ >mRNA_H-paniculata_contig1918.4818.1 ID=mRNA_H-paniculata_contig1918.4818.1|Name=mRNA_H-paniculata_contig1918.4818.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2562bp|location=Sequence derived from alignment at H-paniculata_contig1918:6962..14544+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |