mRNA_H-paniculata_contig19107.4793.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig19107.4793.1
Unique NamemRNA_H-paniculata_contig19107.4793.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig19107.4793.1 vs. uniprot
Match: D8LIK6_ECTSI (Inositol 2-dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIK6_ECTSI)

HSP 1 Score: 307 bits (787), Expect = 4.780e-95
Identity = 149/169 (88.17%), Postives = 157/169 (92.90%), Query Frame = 3 
Query:    6 SGGLHNDMAVHDFDVARFLVGAEVEEVYCKGSCTVDPAIGEAGDIDTSLAMLTFSNGVVVTVDNCRQATYGYDQRVEVFGSKGMIQSNNKHAHTCTVSNDESVSTCKAMAFFMDRYADAYRNEMVAFVDCAHEGKPAPVGVEDGRAAYLIGKAAKASMESGAPIKITDV 512
            SGGLHNDMAVHDFD+ARFL G+EV EVYCKGSC VDPAIGEAGDIDTSLAMLTF NGVV TVDN R+ATYGYDQRVEVFGSKGMIQSNNKHA+TC VSNDESVSTCKAMAFFMDRYADAYRNEMVAFVDCAHEGK  PVGVEDGRAAYLIGKAAK SME+G P+K+ D+
Sbjct:  168 SGGLHNDMAVHDFDMARFLAGSEVAEVYCKGSCKVDPAIGEAGDIDTSLAMLTFENGVVATVDNSRKATYGYDQRVEVFGSKGMIQSNNKHANTCVVSNDESVSTCKAMAFFMDRYADAYRNEMVAFVDCAHEGKATPVGVEDGRAAYLIGKAAKQSMETGLPVKVADM 336
[Close]
BLAST of mRNA_H-paniculata_contig19107.4793.1 vs. uniprot
Match: A0A836CCZ1_9STRA (Inositol 2-dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCZ1_9STRA)

HSP 1 Score: 260 bits (664), Expect = 6.250e-77
Identity = 127/171 (74.27%), Postives = 144/171 (84.21%), Query Frame = 3 
Query:    3 VSGGLHNDMAVHDFDVARFLVGAEVEEVYCKGSCTVDPAIGEAGDIDTSLAMLTFSNGVVVTVDNCRQATYGYDQRVEVFGSKGMIQSNNKHAHTCTVSNDESVSTCKAMAFFMDRYADAYRNEMVAFVD-CAHEGKPAPVGVEDGRAAYLIGKAAKASMESGAPIKITDV 512
            VSGGLHNDMAVHDFD+AR ++G+EVEEVYCKGSC V+P IGEAGDIDTSL MLTF NGVV TVDNCRQA+YGYDQRVEVFGSKGM+Q NN + + C VSN  +V      +FFMDRYADAYRNEM+AFVD CA   K +PVGV DGRAAYLIGKAAK SME+G P+KI++V
Sbjct:  167 VSGGLHNDMAVHDFDMARHIIGSEVEEVYCKGSCKVNPEIGEAGDIDTSLVMLTFENGVVATVDNCRQASYGYDQRVEVFGSKGMVQLNNAYGNNCVVSNSAAVQRDLPFSFFMDRYADAYRNEMIAFVDVCASADKKSPVGVSDGRAAYLIGKAAKQSMETGKPVKISEV 337
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BLAST of mRNA_H-paniculata_contig19107.4793.1 vs. uniprot
Match: W7TD69_9STRA (Myo-inositol 2-dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TD69_9STRA)

HSP 1 Score: 199 bits (506), Expect = 3.470e-54
Identity = 98/166 (59.04%), Postives = 121/166 (72.89%), Query Frame = 3 
Query:    6 SGGLHNDMAVHDFDVARFLVGAEVEEVYCKGSCTVDPAIGEAGDIDTSLAMLTFSNGVVVTVDNCRQATYGYDQRVEVFGSKGMIQSNNKHAHTCTVSNDESVSTCKAMAFFMDRYADAYRNEMVAFVDCAHEGKPAPVGVEDGRAAYLIGKAAKASMESGAPIKI 503
            SGGLH DMA+HDFD+ARF+ G+++ EV+ KG C +DPAI EAGDIDTSL +L F+NGV+ T+ N R+ATYGYDQRVEVFGSKGMIQS N   + CT++  ESV       FFMDRY +AY+ EM  FV CA  G   P GV +GRAA  +  AA ASM+S AP+ +
Sbjct:  169 SGGLHCDMAIHDFDMARFITGSDIVEVFTKGDCKIDPAIAEAGDIDTSLVVLKFANGVIGTISNSRKATYGYDQRVEVFGSKGMIQSENLRPNMCTLATAESVHQDLPFNFFMDRYTEAYKVEMEEFVKCALAGSKPPCGVAEGRAATKVAMAAAASMKSNAPVAL 334
[Close]
BLAST of mRNA_H-paniculata_contig19107.4793.1 vs. uniprot
Match: A0A1I0XYV3_9BACL (Myo-inositol 2-dehydrogenase n=2 Tax=Cohnella sp. OV330 TaxID=1855288 RepID=A0A1I0XYV3_9BACL)

HSP 1 Score: 189 bits (481), Expect = 1.770e-50
Identity = 91/171 (53.22%), Postives = 124/171 (72.51%), Query Frame = 3 
Query:    3 VSGGLHNDMAVHDFDVARFLVGAEVEEVYCKGSCTVDPAIGEAGDIDTSLAMLTFSNGVVVTVDNCRQATYGYDQRVEVFGSKGMIQSNNKHAHTCTVSNDESVSTCKAMAFFMDRYADAYRNEMVAFVDCAHEGKPAPVGVEDGRAAYLIGKAAKASMESGAPIKITDVA 515
            VSGGL  DMA+HDFD+ARFL G+EVEEV+ +G+  VDP+IGEAGDIDT++  L F++G +  +DN R+A YGYDQRVEVFGS G +   N + +T  VS  E+++  K + FF++RY +AYR+EM  FVD    G+P PV  +DG  A LI  AAK S+E+G P+K+ ++A
Sbjct:  171 VSGGLFMDMAIHDFDIARFLSGSEVEEVFAQGAVLVDPSIGEAGDIDTAITTLKFASGALGVIDNSRRAVYGYDQRVEVFGSGGSVSIGNDYPNTAVVSGPEAITRDKPLHFFLERYTEAYRDEMRQFVDSVRTGRPVPVSGQDGLQAELIALAAKRSLETGRPVKLAELA 341
[Close]
BLAST of mRNA_H-paniculata_contig19107.4793.1 vs. uniprot
Match: A0A7V2Y2P9_9BACT (Inositol 2-dehydrogenase n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V2Y2P9_9BACT)

HSP 1 Score: 187 bits (474), Expect = 1.270e-49
Identity = 93/167 (55.69%), Postives = 118/167 (70.66%), Query Frame = 3 
Query:    3 VSGGLHNDMAVHDFDVARFLVGAEVEEVYCKGSCTVDPAIGEAGDIDTSLAMLTFSNGVVVTVDNCRQATYGYDQRVEVFGSKGMIQSNNKHAHTCTVSNDESVSTCKAMAFFMDRYADAYRNEMVAFVDCAHEGKPAPVGVEDGRAAYLIGKAAKASMESGAPIKI 503
            VSGG+  DM +HDFD+ARFL G EVEEVY  G  TVDPAIGEAGDIDT+L +L F NGV+ T+DNCRQA YGYDQRVE FGSKG IQ++N +A++  +++ +SV     + FFM+RY +++  EM AF       KP PV  ED RAA L+  AA+ S E+  P K+
Sbjct:  169 VSGGIFMDMTIHDFDMARFLAGDEVEEVYVSGGVTVDPAIGEAGDIDTALTVLRFRNGVIGTIDNCRQAVYGYDQRVEAFGSKGSIQTDNNYANSAIIASAQSVGRDLPLNFFMERYTESFLAEMCAFAGAVLSNKPVPVTGEDARAALLMALAARRSYETKQPQKV 335
[Close]
BLAST of mRNA_H-paniculata_contig19107.4793.1 vs. uniprot
Match: A0A1V5RRZ9_9CHLR (Inositol 2-dehydrogenase n=1 Tax=Chloroflexi bacterium ADurb.Bin325 TaxID=1852859 RepID=A0A1V5RRZ9_9CHLR)

HSP 1 Score: 186 bits (471), Expect = 3.360e-49
Identity = 90/170 (52.94%), Postives = 120/170 (70.59%), Query Frame = 3 
Query:    3 VSGGLHNDMAVHDFDVARFLVGAEVEEVYCKGSCTVDPAIGEAGDIDTSLAMLTFSNGVVVTVDNCRQATYGYDQRVEVFGSKGMIQSNNKHAHTCTVSNDESVSTCKAMAFFMDRYADAYRNEMVAFVDCAHEGKPAPVGVEDGRAAYLIGKAAKASMESGAPIKITDV 512
            VSGG+  DM +HDFD+AR+LVGAEV+EVY + + TVDPAIGEAGD+DT+L +L F++GV+ T+DNCR+ATYGYDQRVE+ GSKG I + N + +   VS+  SV     + FFMDRY +++  E+ AFVD     KP PVG  D R +  IG AA  S   G P+K+ ++
Sbjct:  168 VSGGMFLDMTIHDFDMARYLVGAEVDEVYTQAAVTVDPAIGEAGDVDTALIVLRFADGVIGTIDNCRRATYGYDQRVEILGSKGSIATGNNYPNAAVVSDAASVRRDLPLNFFMDRYTESFAVEVAAFVDAVLHDKPVPVGGTDARVSVAIGLAAARSHREGRPVKVREM 337
[Close]
BLAST of mRNA_H-paniculata_contig19107.4793.1 vs. uniprot
Match: A0A1V5PBF4_9CHLR (Inositol 2-dehydrogenase n=1 Tax=Chloroflexi bacterium ADurb.Bin360 TaxID=1852861 RepID=A0A1V5PBF4_9CHLR)

HSP 1 Score: 184 bits (468), Expect = 9.350e-49
Identity = 89/171 (52.05%), Postives = 119/171 (69.59%), Query Frame = 3 
Query:    3 VSGGLHNDMAVHDFDVARFLVGAEVEEVYCKGSCTVDPAIGEAGDIDTSLAMLTFSNGVVVTVDNCRQATYGYDQRVEVFGSKGMIQSNNKHAHTCTVSNDESVSTCKAMAFFMDRYADAYRNEMVAFVDCAHEGKPAPVGVEDGRAAYLIGKAAKASMESGAPIKITDVA 515
            VSGG+  DM +HDFD+AR+L+G++VEEVY  G   VDPAIGEAGD+DT++ ML F+NG +  +DNCR+A YGYDQR EVFGS GM+ S N       +SN E V + K + FF++RYA+++  E+  FV C H G P PV   DGRA  L+  AA  S+  G P+K+++VA
Sbjct:  168 VSGGMFFDMTIHDFDMARYLLGSDVEEVYVMGGVLVDPAIGEAGDVDTAVIMLRFANGALGVIDNCRKAVYGYDQRAEVFGSGGMVASANNTPFNACLSNAEGVHSPKPLYFFLERYAESFVAELRDFVACLHNGTPTPVSGLDGRAPVLMAMAATRSLHEGRPVKLSEVA 338
[Close]
BLAST of mRNA_H-paniculata_contig19107.4793.1 vs. uniprot
Match: A0A7S2S3I1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S3I1_9STRA)

HSP 1 Score: 183 bits (465), Expect = 3.030e-48
Identity = 87/155 (56.13%), Postives = 107/155 (69.03%), Query Frame = 3 
Query:    6 SGGLHNDMAVHDFDVARFLVGAEVEEVYCKGSCTVDPAIGEAGDIDTSLAMLTFSNGVVVTVDNCRQATYGYDQRVEVFGSKGMIQSNNKHAHTCTVSNDESVSTCKAMAFFMDRYADAYRNEMVAFVDCAHEGKPAPVGVEDGRAAYLIGKAAK 470
            SGGLH DM +HDFD+A ++ G+ + EV   G CTVDP I EAGDIDTS+ M   +NG +VT+DNCR  TYGYDQR E FGS G I ++N+  + CT+     V   K M+FFMDRYA+AY  EM AFVDC    KPAP GVE+GR A ++  AAK
Sbjct:  190 SGGLHMDMCIHDFDMAMWVAGSPIVEVMVMGGCTVDPKIAEAGDIDTSVVMGKCANGTIVTIDNCRATTYGYDQRFEAFGSNGAISTDNRSPNQCTIMGGNGVVKDKPMSFFMDRYAEAYTAEMEAFVDCCRANKPAPCGVEEGRVATVVAMAAK 344
[Close]
BLAST of mRNA_H-paniculata_contig19107.4793.1 vs. uniprot
Match: A0A1W9UV07_9CHLR (Inositol 2-dehydrogenase n=1 Tax=Anaerolineaceae bacterium 4572_32.1 TaxID=1971623 RepID=A0A1W9UV07_9CHLR)

HSP 1 Score: 182 bits (462), Expect = 6.640e-48
Identity = 88/171 (51.46%), Postives = 119/171 (69.59%), Query Frame = 3 
Query:    3 VSGGLHNDMAVHDFDVARFLVGAEVEEVYCKGSCTVDPAIGEAGDIDTSLAMLTFSNGVVVTVDNCRQATYGYDQRVEVFGSKGMIQSNNKHAHTCTVSNDESVSTCKAMAFFMDRYADAYRNEMVAFVDCAHEGKPAPVGVEDGRAAYLIGKAAKASMESGAPIKITDVA 515
            VSGG+  DM +HDFD+ARFL+G+EVEE+Y  G   VDPAIG+AGDIDT++  L F NGV+ T+DN RQA YGYDQRVEVFGS+G I + N +A+T T+   ++V     + FFM+RYA +Y  EM AF+ C  +    PV   DGR   ++G AA+ S +   PIK++++A
Sbjct:  168 VSGGIFLDMTIHDFDMARFLIGSEVEEIYTAGGVMVDPAIGQAGDIDTAIITLRFENGVIGTIDNSRQAVYGYDQRVEVFGSQGSISTANNYANTATIRGPQNVHRDLPLNFFMERYAKSYIAEMEAFIACIQQDSAPPVSGRDGRIPVVMGCAARKSYQENRPIKLSEIA 338
[Close]
BLAST of mRNA_H-paniculata_contig19107.4793.1 vs. uniprot
Match: UPI0019F41515 (Inositol 2-dehydrogenase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=UPI0019F41515)

HSP 1 Score: 182 bits (462), Expect = 6.640e-48
Identity = 88/170 (51.76%), Postives = 119/170 (70.00%), Query Frame = 3 
Query:    3 VSGGLHNDMAVHDFDVARFLVGAEVEEVYCKGSCTVDPAIGEAGDIDTSLAMLTFSNGVVVTVDNCRQATYGYDQRVEVFGSKGMIQSNNKHAHTCTVSNDESVSTCKAMAFFMDRYADAYRNEMVAFVDCAHEGKPAPVGVEDGRAAYLIGKAAKASMESGAPIKITDV 512
            VSGG+  DM +HDFD+AR+L+G+EVEE+Y  G   VDPAIG+AGDIDT++  L F NGV+ T+DN RQA YGYDQRVEVFGS GM+  +N  + +  VSN +SV     + FF++RY D+Y  EM AF++C  E K  PV   DGR   ++G AA+ S E   P+K++++
Sbjct:  168 VSGGIFLDMTIHDFDMARYLIGSEVEEIYAAGGVMVDPAIGQAGDIDTAVITLRFKNGVIGTIDNSRQAVYGYDQRVEVFGSGGMVAVSNNTSDSAVVSNGQSVHGPLPLHFFIERYVDSYIAEMKAFIECIQEDKAPPVTGIDGRIPVVMGYAARKSYEENRPVKLSEI 337
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19107.4793.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIK6_ECTSI4.780e-9588.17Inositol 2-dehydrogenase n=2 Tax=Ectocarpus TaxID=... [more]
A0A836CCZ1_9STRA6.250e-7774.27Inositol 2-dehydrogenase n=1 Tax=Tribonema minus T... [more]
W7TD69_9STRA3.470e-5459.04Myo-inositol 2-dehydrogenase n=2 Tax=Monodopsidace... [more]
A0A1I0XYV3_9BACL1.770e-5053.22Myo-inositol 2-dehydrogenase n=2 Tax=Cohnella sp. ... [more]
A0A7V2Y2P9_9BACT1.270e-4955.69Inositol 2-dehydrogenase n=1 Tax=Candidatus Hydrog... [more]
A0A1V5RRZ9_9CHLR3.360e-4952.94Inositol 2-dehydrogenase n=1 Tax=Chloroflexi bacte... [more]
A0A1V5PBF4_9CHLR9.350e-4952.05Inositol 2-dehydrogenase n=1 Tax=Chloroflexi bacte... [more]
A0A7S2S3I1_9STRA3.030e-4856.13Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1W9UV07_9CHLR6.640e-4851.46Inositol 2-dehydrogenase n=1 Tax=Anaerolineaceae b... [more]
UPI0019F415156.640e-4851.76Inositol 2-dehydrogenase n=1 Tax=Chloroflexi bacte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19107contigH-paniculata_contig19107:361..4700 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score294.7
Seed ortholog evalue2.7e-77
Seed eggNOG ortholog2880.D8LIK6
Hectar predicted targeting categoryother localisation
EggNOG free text desc.D-xylose 1-dehydrogenase (NADP ) activity
EggNOG OGsCOG0673@1,KOG2741@2759
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size2193
Cds size492
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19107.4793.1prot_H-paniculata_contig19107.4793.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig19107 387..2884 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929463.0323968-UTR-H-paniculata_contig19107:360..3861622929463.0323968-UTR-H-paniculata_contig19107:360..386Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig19107 361..386 +
1691480872.1805778-UTR-H-paniculata_contig19107:360..3861691480872.1805778-UTR-H-paniculata_contig19107:360..386Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig19107 361..386 +
1622929463.1240408-UTR-H-paniculata_contig19107:2884..43241622929463.1240408-UTR-H-paniculata_contig19107:2884..4324Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig19107 2885..4324 +
1691480872.240015-UTR-H-paniculata_contig19107:2884..43241691480872.240015-UTR-H-paniculata_contig19107:2884..4324Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig19107 2885..4324 +
1622929463.1376014-UTR-H-paniculata_contig19107:4465..47001622929463.1376014-UTR-H-paniculata_contig19107:4465..4700Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig19107 4466..4700 +
1691480872.2492132-UTR-H-paniculata_contig19107:4465..47001691480872.2492132-UTR-H-paniculata_contig19107:4465..4700Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig19107 4466..4700 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929463.0534444-CDS-H-paniculata_contig19107:386..4671622929463.0534444-CDS-H-paniculata_contig19107:386..467Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19107 387..467 +
1691480872.1974764-CDS-H-paniculata_contig19107:386..4671691480872.1974764-CDS-H-paniculata_contig19107:386..467Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19107 387..467 +
1622929463.0685296-CDS-H-paniculata_contig19107:731..8751622929463.0685296-CDS-H-paniculata_contig19107:731..875Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19107 732..875 +
1691480872.2070274-CDS-H-paniculata_contig19107:731..8751691480872.2070274-CDS-H-paniculata_contig19107:731..875Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19107 732..875 +
1622929463.085418-CDS-H-paniculata_contig19107:1049..11471622929463.085418-CDS-H-paniculata_contig19107:1049..1147Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19107 1050..1147 +
1691480872.217151-CDS-H-paniculata_contig19107:1049..11471691480872.217151-CDS-H-paniculata_contig19107:1049..1147Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19107 1050..1147 +
1622929463.0991592-CDS-H-paniculata_contig19107:2456..25981622929463.0991592-CDS-H-paniculata_contig19107:2456..2598Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19107 2457..2598 +
1691480872.2247696-CDS-H-paniculata_contig19107:2456..25981691480872.2247696-CDS-H-paniculata_contig19107:2456..2598Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19107 2457..2598 +
1622929463.1095717-CDS-H-paniculata_contig19107:2857..28841622929463.1095717-CDS-H-paniculata_contig19107:2857..2884Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19107 2858..2884 +
1691480872.2322364-CDS-H-paniculata_contig19107:2857..28841691480872.2322364-CDS-H-paniculata_contig19107:2857..2884Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19107 2858..2884 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig19107.4793.1

>prot_H-paniculata_contig19107.4793.1 ID=prot_H-paniculata_contig19107.4793.1|Name=mRNA_H-paniculata_contig19107.4793.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=164bp
MAVHDFDVARFLVGAEVEEVYCKGSCTVDPAIGEAGDIDTSLAMLTFSNG
VVVTVDNCRQATYGYDQRVEVFGSKGMIQSNNKHAHTCTVSNDESVSTCK
AMAFFMDRYADAYRNEMVAFVDCAHEGKPAPVGVEDGRAAYLIGKAAKAS
MESGAPIKITDVA*
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mRNA from alignment at H-paniculata_contig19107:361..4700+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig19107.4793.1 ID=mRNA_H-paniculata_contig19107.4793.1|Name=mRNA_H-paniculata_contig19107.4793.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4340bp|location=Sequence derived from alignment at H-paniculata_contig19107:361..4700+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGTTTCGGGAGGACTTCACAACGACATGGCGGTGCACGACTTCGACGTC
GCTCGATTTCTGGTGGGCGCCGAGGTCGAGGAGGTCTACTGTAAGGGTAG
CTGCACGGTAAGGGATCTGCATAACGGAAGTGTCAGATCATGCAATCAAT
GACCCAGTAAGGGATGGTTTTTACCGCCATGATAGCTGGGTTATACCGTT
CCATGGGGGCTGCGAGAATGATGGGTTAGTGCGCCACTGACGCGTGATAT
GTATCGTTTACAGTAATTTTGAAGGAAAATACTAAAACAGCGGCAACAGG
GGAACTTCGGAACACCGTCCTGGACATTCGAATCGTGAGTTCTGATGAAA
CTCTGCTCGAAATTATTTCAGGTCGACCCCGCCATCGGGGAGGCGGGAGA
CATCGACACCAGCCTTGCAATGCTCACTTTCTCCAATGGGGTTGTGGTGA
CTGTCGACAACTGCCGGCAGGCGACGTACGGATACGACCAGAGGGTGGAA
GTCTTCGGCTCCAAGGTACCAAGAGGAAAATATCCATGATACTTGGACGA
AACATGGGGTGTCGCTATAGGAAATTATAGCGGTTTTTGGCACTAGAGAT
ATCTGTAAAACAAACCACATGTCATGATGTCTAGAGCGCAGTGTTCTCAG
ATATTCATGGCGCGTTTTATTATTCATGTTGATGAACAGGGAATGATCCA
GAGCAACAACAAGCACGCGCACACCTGCACCGTCTCTAACGATGAGTCAG
TATCTACATGCAAGGCAATGGCTTTCTTCATGGACAGGTGATTGATTTTT
TTCGATGATGTAACGTGGTATCCGCACGCTCGTGGAGTCTCCTGCTGATG
AAAACAGCGGCCAGGAGAAACGAACAATGGAAATAGAAGTGTCGAGTGTA
GTTTCGAACATAGATGTTTTAACCTCTGCACTATCCTTGTTTTTCCATAG
ACATCCAAGTCATGGGTAATAGTGTGATGACCCTTACCTAAAATCAGGTG
TGGGCGTTACCGTGGATTTTAGTCCATGACTGGTCATGTTTGGAAGAACC
TACCTGTATTGAAAAGTCGCCCACTTTCAGAAATGTGAAATTTCAAGATT
TTGCTCGTGGATCCCAAAAGGGGGTGCATTAACGTCGTATTGGAAATACG
GACGTCTCGACTTCGTGCGAAAACGTGTAGGCATCATGGTGGATTGCATA
TTTCGTCTCTGCCGGATTGCAGATCCATTGGTAAATATCCTTTGAGGATA
CAGCGAGTCGCGCATTCATGTTGCAGAGTTCCGAAAATTATGGGGTGTCT
GTCCGGTGATTACAAACCAATGCATTACTCCAGAAAGTACAAGTGTGGAG
ATGCAAATCCATAACCATCTTTCGTATGAGGACGTTTTTGAGGAATAGTT
AAAATTTATATCGTGGATTACGGGCTCGTTCCCGTGGTAATCTGACATGA
TCAAAACCGTTTGGGTTTACCGAATTTATTGGTTTAAATAATGAAAAAAA
ACCTGCCAGCCTCATTTGTTTTGCGGTTGAGTCGATCAACATCCGATGAT
GACACCTTGGGATACGTCAAATGATGCTTGGTATTAAGCATGATGCTGGC
TCGTCAAATATCTTGTGAAAAATTATCCCGTGTGGTGCTAGCTAGTGTTT
ATTGATCCATGTCCCGTGATTTCATATCTATGCACCACTCCAGAACTCAA
AAATGTGGAGAAGCAACCTGATCACCATCTTTCGTATGAGGACATGGGTC
TTTCGAGCTTCACAGCTGTGTAAGGACACGACAGCTCTTATTTTATTACG
TAATGCCCTTGTATTTTATTGTACTCCCTCAGCATGCCCATGTCTCGTGA
TTACAAATCTATGCACCACTCCAGAAAGCACAAATGTGGAGAAGCAACCT
GATCACCATCTTTCGTATGAGGACATGAACTTGCTTGAGCCTCCATGCCA
CAGCCGCAAGATGTTATCAACCCGTGCGTGTCTGAATCTTGGCACTGAGT
ATACCGGTACAACATGTGAATTATCCATCACCTGGTGATTTTTGCCTTTG
GGCGAGTAGTTCCAATACCTTTTCAACTGTACTCACCTGCGAACAGGTAC
GCTGACGCATACCGTAATGAAATGGTGGCGTTCGTGGACTGTGCCCATGA
GGGTAAGCCTGCACCAGTCGGTGTGGAGGATGGCAGGGCAGCGTACCTCA
TTGGGAAGGCGGCGAAGGCATCAATGGAGAGCGGCGCGGTAAGTCTTCCC
AACACAACTTTTCAAATGCGTTGATGGGTAACTCATTGTGCTCACGTGAT
TGTTTTGCAGTTGCGAACTTTCAGCTGTTATGATACACTCATTTGATAGG
GCAAATGTCAGGGTGTGAAGTTCGCAATGTGTATGCTGTATTTTTTGTGT
GAACGTTCTCTAGTGCGGGATGATCCGATGTCCGGTCTGTTGTCAAAGTG
GCTCATATGTCCTTCCGTTCGGTCGTTTTTCTCCGTCATGAATGCAGCCG
ATCAAGATCACGGATGTGGCCTGAACTTCATCTGCGACTATTAGAAGTAT
GCTCTGAATTATTGCCTGTAGTCAGCAGAGCGTTCGTTTTTGTGCTTGGT
TCTTGCGTAAATTTTGTAACCAAATTTTGTTGTGGAATTGGTTCCCTCTA
GTCTCGGACCCTGTTCCGTGGAGATAAACTTGAAGCGGTGGAACGGTCGT
CGGTTGTGGTTGTTGGCCGGTTCTACACTGCTTGTGTGTCGACCAACTTT
GTGATGGCGGTTTAGGGTGGGCAGTTTCATGAGAAACATAGGATGAAACG
ACAGGATACTGTTGGTTCACTTTTTTGTGTTCGTTCGCCCCTGGTGCCGC
GTTTCGTGCAGAAATAGTTGTAATAGGTAATTTCGAAAGATGGAAGTAGA
TTCGTCTTTTTCTCACGAAGTAGTATCATCATCTTTTGAGTCCAGGTTTG
TAGTACAAATCGAATTCACCGCAGGTAAAGTGTCGTTTTTTCTCGATTTG
GGGTGCGTTTTCCACTTTGGTTTCGAATCTGTAAGAAGAACATTTCATGC
TAATCGTCTTCTCCGAGACATTGTTTTATGAGGAACGGGGAATTGTATTA
ATGTTCGACGTGGGCCCGCCACTCGCACCGTGGCTGTGCTATTCTGCATC
TATATGCTATCTTATCGGCGAAGTGTCGACTTGACCGATATTCAACTGTA
CCTGAAAATATTTTGATTTCTTGATGCTCACAGGAACCATCGGTAAGGTT
CAACCCAATAGTCAGAGGTCTTGAAGTGGGGCAACCCCCACACTGCCCAC
CTGGTTCAGCTGAACCGGGGTGGCGTCTACCCCACAGAAGAATAATGGTC
CCGTAAAAGAAAATGAAGGCGTACTTCGGTATGGAAGCACGACATGAAGA
TTTTTGGTTTGACCCTCCGGGGGTTGAAAGAAGAATGATCAGTCCACCCA
GCGCGCGAACTGTCATGAAAATATATACATTCCAGGTCGAAATTTTCCTT
ACAAGAACGTGGAAGCAGGGCAGGTAGAACCTATATCACCGAAAGTGAAA
AATACCTCTACACAATATTTCAGCTTACGTTTTGGCGAACAAATTTCAAC
TCTACACCTAGCGGCAGAAACCGATCATTACCGAAAACGACGAATTTCAA
CCGTTTCTGCTTGTAAGCGCACAATCTTGATCTTGAACAAGTGTGATAGA
CAAAAATAATTAACCCCAACCCATCAGCAACGTTTCTCACAAAATGAAAA
ACATATTTCACTGTGAACTTTGAAATCATACAAACCACTTTCACAATTGG
GAAACATCAATAATATACAGCGAAAAATAAACAATGAAACAATTGGGAAA
AAATAAGTGCCGAATTGGAATCATACAGTGAACGTACTCATCCTTAATGG
AAATGAGAGATAAATTTATGTTGAAAAACGCCATCGTTAATCTCAAATAT
TACGCGATTTATCACCTATATACAATTGCCATAACATGGATTTGTCCAGA
AAAGAAGCACCGATTTCATCGGTGTAGATGAGAAGTTGTTCTAGAAAACG
ATCAATGGCAAAGCACGCTATACCTTAATCTAACAGAACAGGTAATGAAT
ATATGGAATGTGGAAAGTACGCTCAACACCGAAATGTGCTTTTGTAATCT
GGTGAAAGTTCTACTATACAGTCGTACTCATCGTCTGCTCATACCTCGCC
TGGCACGTCGCTGGTAGTATGAAAAACATAGCGGTCCCGTCTGAATGGTT
ACCGCCTACGTCGCGGACGGGATCAGCTGCCCGGGCGAATTCCATAACAC
TAACCCAACTCACCCCGAGGTAAACTCCAGGTTGATGGAG
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Coding sequence (CDS) from alignment at H-paniculata_contig19107:361..4700+

>mRNA_H-paniculata_contig19107.4793.1 ID=mRNA_H-paniculata_contig19107.4793.1|Name=mRNA_H-paniculata_contig19107.4793.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=984bp|location=Sequence derived from alignment at H-paniculata_contig19107:361..4700+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGGTGCACGACTTCGACGTCGCTCGATTTCTGGTGGGCGCCGAGGT
CGAGGAGGTCTACTGTAAGGGTAGCTGCACGATGGCGGTGCACGACTTCG
ACGTCGCTCGATTTCTGGTGGGCGCCGAGGTCGAGGAGGTCTACTGTAAG
GGTAGCTGCACGGTCGACCCCGCCATCGGGGAGGCGGGAGACATCGACAC
CAGCCTTGCAATGCTCACTTTCTCCAATGGGGTTGTGGTGACTGTCGACA
ACTGCCGGCAGGCGACGTACGGATACGACCAGAGGGTGGAAGTCTTCGGC
TCCAAGGTCGACCCCGCCATCGGGGAGGCGGGAGACATCGACACCAGCCT
TGCAATGCTCACTTTCTCCAATGGGGTTGTGGTGACTGTCGACAACTGCC
GGCAGGCGACGTACGGATACGACCAGAGGGTGGAAGTCTTCGGCTCCAAG
GGAATGATCCAGAGCAACAACAAGCACGCGCACACCTGCACCGTCTCTAA
CGATGAGTCAGTATCTACATGCAAGGCAATGGCTTTCTTCATGGACAGGG
AATGATCCAGAGCAACAACAAGCACGCGCACACCTGCACCGTCTCTAACG
ATGAGTCAGTATCTACATGCAAGGCAATGGCTTTCTTCATGGACAGGTAC
GCTGACGCATACCGTAATGAAATGGTGGCGTTCGTGGACTGTGCCCATGA
GGGTAAGCCTGCACCAGTCGGTGTGGAGGATGGCAGGGCAGCGTACCTCA
TTGGGAAGGCGGCGAAGGCATCAATGGAGAGCGGCGCGGTACGCTGACGC
ATACCGTAATGAAATGGTGGCGTTCGTGGACTGTGCCCATGAGGGTAAGC
CTGCACCAGTCGGTGTGGAGGATGGCAGGGCAGCGTACCTCATTGGGAAG
GCGGCGAAGGCATCAATGGAGAGCGGCGCGCCGATCAAGATCACGGATGT
GGCCTGACCGATCAAGATCACGGATGTGGCCTGA
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