mRNA_H-paniculata_contig19106.4792.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig19106.4792.1
Unique NamemRNA_H-paniculata_contig19106.4792.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig19106.4792.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 2.450e-44
Identity = 88/216 (40.74%), Postives = 127/216 (58.80%), Query Frame = 2
Query:  356 QLLRRRDAAAGM------SAKTA*TFFHAFCEKFVHELYGT*IKLPDGGDLKRVMAVYDGLGFAGGMGSADITSVHWGCAPVSHARLYTGKEKIPTLAYEMIVDHSGRVLSVTKGCEGSQIDKAIVRLXXXXXXXXXXXXXXLDKAISKVRKDEPYVSTEFTLINADGTMTTHKDVFIIIDEGYHKWRILIYPMKSPGSAEAILWTHRLDSVRKDV 985
            Q+L R +  A +      S +T  + FH FC+ F  ELY   + LP G DL++VM  YD +GF G +GS D+T ++WG  P + AR+YTGKE  PT+A+++ VDHSGRVL+VT+G  G+  DK I+R                DKA++++R D  Y   ++ L   DG     K  ++++D GYHKWR LI P K P     ++++ RL+S RKDV
Sbjct:   89 QILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRY---------------DKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDV 289          
BLAST of mRNA_H-paniculata_contig19106.4792.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 8.850e-44
Identity = 89/201 (44.28%), Postives = 117/201 (58.21%), Query Frame = 2
Query:  389 MSAKTA*TFFHAFCEKFVHELYGT*IKLPD--GGDLKRVMAVYDGLGFAGGMGSADITSVHWGCAPVSHARLYTGKEKIPTLAYEMIVDHSGRVLSVTKGCEGSQIDKAIVRLXXXXXXXXXXXXXXLDKAISKVRKDEPYVSTEFTLINADGTMTTHKDVFIIIDEGYHKWRILIYPMKSPGSAEAILWTHRLDSVRKDV 985
            MSAKT  T FH FC+ F  E+Y   I LP    G+L  VM  YD LGF+G MGS D+T + W   P + AR YTGKE +PT+ Y++ V+H+GR ++VT+G   S  DK  V                 D  + K+R D  Y    F + N DGT TT K  ++++D GYHKW+IL+ P K P S   IL++ RL+SVRKDV
Sbjct:  121 MSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTV---------------CWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDV 306          
BLAST of mRNA_H-paniculata_contig19106.4792.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 1.520e-43
Identity = 88/216 (40.74%), Postives = 127/216 (58.80%), Query Frame = 2
Query:  356 QLLRRRDAAAGM------SAKTA*TFFHAFCEKFVHELYGT*IKLPDGGDLKRVMAVYDGLGFAGGMGSADITSVHWGCAPVSHARLYTGKEKIPTLAYEMIVDHSGRVLSVTKGCEGSQIDKAIVRLXXXXXXXXXXXXXXLDKAISKVRKDEPYVSTEFTLINADGTMTTHKDVFIIIDEGYHKWRILIYPMKSPGSAEAILWTHRLDSVRKDV 985
            Q+L R +  A +      S +T  + FH FC+ F  ELY   + LP G DL++VM  YD +GF G +GS D+T ++WG  P + AR+YTGKE  PT+A+++ VDHSGRVL+VT+G  G+  DK I+R                DKA++++R D  Y   ++ L   DG     K  ++++D GYHKWR LI P K P     ++++ RL+S RKDV
Sbjct:  180 QILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRY---------------DKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDV 380          
BLAST of mRNA_H-paniculata_contig19106.4792.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 1.280e-42
Identity = 89/201 (44.28%), Postives = 118/201 (58.71%), Query Frame = 2
Query:  389 MSAKTA*TFFHAFCEKFVHELYGT*IKLP--DGGDLKRVMAVYDGLGFAGGMGSADITSVHWGCAPVSHARLYTGKEKIPTLAYEMIVDHSGRVLSVTKGCEGSQIDKAIVRLXXXXXXXXXXXXXXLDKAISKVRKDEPYVSTEFTLINADGTMTTHKDVFIIIDEGYHKWRILIYPMKSPGSAEAILWTHRLDSVRKDV 985
            MS  T    FH FCE F  E+Y   I LP  + G+L RVM  Y+ LGF G MGS D+T + W   P +  R YTGKE  PT+ Y++ V+H+GRVL+VT+G  GS  DK I+                 D+A+ ++R D+ Y    FT+   DGT  T K  ++I+D GYHKWR+LI P K P S   +L++ RL+SVRKDV
Sbjct:  150 MSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTII---------------CCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDV 335          
BLAST of mRNA_H-paniculata_contig19106.4792.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 3.890e-41
Identity = 92/216 (42.59%), Postives = 122/216 (56.48%), Query Frame = 2
Query:  356 QLLRRRDAAAGM------SAKTA*TFFHAFCEKFVHELYGT*IKLPDGGDLKRVMAVYDGLGFAGGMGSADITSVHWGCAPVSHARLYTGKEKIPTLAYEMIVDHSGRVLSVTKGCEGSQIDKAIVRLXXXXXXXXXXXXXXLDKAISKVRKDEPYVSTEFTLINADGTMTTHKDVFIIIDEGYHKWRILIYPMKSPGSAEAILWTHRLDSVRKDV 985
            Q+L R +  A +      S +TA   FH F   F  E+Y   I LP G   K+VM  YD LGF+G  GS D+T + WG  P + AR YTGKE  PT+AY++ VDH+ RVL+VT G  GS  DK+I+R                D A++K+R+D  Y   EFT+  ADGT    K  ++++D GYHKW  LI P K P     + ++ RL+SVRKDV
Sbjct:  164 QILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRY---------------DTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDV 364          
BLAST of mRNA_H-paniculata_contig19106.4792.1 vs. uniprot
Match: D7FPI7_ECTSI (Transposon protein, putative, Pong sub-class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI7_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 1.610e-39
Identity = 94/257 (36.58%), Postives = 130/257 (50.58%), Query Frame = 2
Query:  389 MSAKTA*TFFHAFCEKFVHELYGT*IKLPD--GGDLKRVMAVYDGLGFAGGMGSADITSVHWGCAPVSHARLYTGKEKIPTLAYEMIVDHSGRVLSVTKGCEGSQIDKAIVRLXXXXXXXXXXXXXXLDKAISKVRKDEPYVSTEFTLINADGTMTTHKDVFIIIDEGYHKWRILIYPMKSPGSAEAILWTHRLDSVRKDVGVSMAF*NADSRF*-TRHPISEKRADRQCHVDVLHSTQHATQVRQHGGDGRELGMG 1150
            MSA T    FH FC+ F  E+Y   I LP    G+L  VM  YD LGF+G MGS D+T + W   P +  R YTGKE +PT+ Y++ V+H+GR  +VT+G  GS  DK IV                 D A+ K+R D+ Y    F + N DGT TT K  ++++D GYHKW+IL+   + P   E            +  G+ +       +    RH +    A RQ  + VLH  QHA  +R++G  G +  MG
Sbjct:  148 MSAATVQAMFHMFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIVWNKCPYNLPRSYTGKEGVPTIGYQVTVNHAGRASAVTEGFTGSTNDKTIV---------------CWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILMGAHQVPAERERSPLFEEAGERAEGRGMLLRHPERPLQDPEARHGVPRAGAHRQRVLHVLHLAQHAAHLRRNGRAGGKHAMG 389          
BLAST of mRNA_H-paniculata_contig19106.4792.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 1.520e-38
Identity = 91/229 (39.74%), Postives = 117/229 (51.09%), Query Frame = 2
Query:  389 MSAKTA*TFFHAFCEKFVHELYGT*IKLP--DGGDLKRVMAVYDGLGFAGGMGSADITSVHWGCAPVSHARLYTGKEKIPTLAYEMIVDHSGRVLSVTKGCEGSQIDKAIVRLXXXXXXXXXXXXXXLDKAISKVRKDEPYV----------------------------STEFTLINADGTMTTHKDVFIIIDEGYHKWRILIYPMKSPGSAEAILWTHRLDSVRKDV 985
            MSAKT    FH FC  F  E+Y   I LP  + G L  VM  YD LGF G +GS D+T + W   P + AR YTGKE  PT+AY++ VDH+GR ++VT+G  GS  DK IV                 D A+ K+  D+ Y                                F + N DGT TT K  ++++D GYHKW+ILI P K P S   +L++ RL+SVRKDV
Sbjct:  108 MSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIV---------------CWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDV 321          
BLAST of mRNA_H-paniculata_contig19106.4792.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 1.500e-37
Identity = 79/181 (43.65%), Postives = 105/181 (58.01%), Query Frame = 2
Query:  449 LYGT*IKLP--DGGDLKRVMAVYDGLGFAGGMGSADITSVHWGCAPVSHARLYTGKEKIPTLAYEMIVDHSGRVLSVTKGCEGSQIDKAIVRLXXXXXXXXXXXXXXLDKAISKVRKDEPYVSTEFTLINADGTMTTHKDVFIIIDEGYHKWRILIYPMKSPGSAEAILWTHRLDSVRKDV 985
            +Y   I LP  + G L  V+  YD LGF G MGS D+T + W   P + AR YTGKE  PT+ Y++ VDH+GR ++VT+G  GS  DK  V                 D A+ K+R D+ Y    F + N DGT TT K  ++++D GYHKW+ILI P K P S   +L++ RL+SVRKDV
Sbjct:    1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTV---------------CWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDV 166          
BLAST of mRNA_H-paniculata_contig19106.4792.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 1.270e-34
Identity = 84/201 (41.79%), Postives = 106/201 (52.74%), Query Frame = 2
Query:  389 MSAKTA*TFFHAFCEKFVHELYGT*IKLP--DGGDLKRVMAVYDGLGFAGGMGSADITSVHWGCAPVSHARLYTGKEKIPTLAYEMIVDHSGRVLSVTKGCEGSQIDKAIVRLXXXXXXXXXXXXXXLDKAISKVRKDEPYVSTEFTLINADGTMTTHKDVFIIIDEGYHKWRILIYPMKSPGSAEAILWTHRLDSVRKDV 985
            MSAKT    FH FC  F  E+Y   I LP  + G L  VM  YD LG                  P + AR YTGK+  PT+AY++ VDH+ R ++VT+G  GS  DK IV                 D A+ K+R D+ Y    F L N DGT TT K  + + D GYHKW+ILI P K P S + +L++ RL+SVRKDV
Sbjct:   43 MSAKTVQGVFHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIV---------------CWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDV 211          
BLAST of mRNA_H-paniculata_contig19106.4792.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 4.840e-31
Identity = 78/223 (34.98%), Postives = 114/223 (51.12%), Query Frame = 2
Query:  335 LASVGERQLLRRRDAAAG------MSAKTA*TFFHAFCEKFVHELYGT*IKLPDGGDLKRVMAVYDGLGFAGGMGSADITSVHWGCAPVSHARLYTGKEKIPTLAYEMIVDHSGRVLSVTKGCEGSQIDKAIVRLXXXXXXXXXXXXXXLDKAISKVRKDEPYVSTEFTLINADGTMTTHKDVFIIIDEGYHKWRILIYPMKSPGSAEAILWTHRLDSVRKDV 985
            L  +G  Q+L R +  A       MS +TA   FH FC+ F   L+   + LP+G  LK+V   Y  +G  G + S D T + W   P S    + GKE   TL YE   DHSGR+LS TKG  G++ DK +V+                D ++ ++R++EP+ S +F L + +G  T H   ++I+D GYH+   LI P K   S     W+ R +S+RKD+
Sbjct:  111 LKVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKR---------------DLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLICPFKEYASEAQQEWSKRFESIRKDI 318          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19106.4792.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KY50_9PHAE2.450e-4440.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHI0_9PHAE8.850e-4444.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE1.520e-4340.74Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBE2_9PHAE1.280e-4244.28Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAU4_9PHAE3.890e-4142.59Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D7FPI7_ECTSI1.610e-3936.58Transposon protein, putative, Pong sub-class n=1 T... [more]
A0A6H5KNX4_9PHAE1.520e-3839.74DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
D7FSK2_ECTSI1.500e-3743.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JUX7_9PHAE1.270e-3441.79DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JV45_9PHAE4.840e-3134.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19106contigH-paniculata_contig19106:1103..3864 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score145.2
Seed ortholog evalue2.8e-32
Seed eggNOG ortholog2880.D7FSK2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Plant transposon protein
EggNOG OGs2E2RF@1,2S9YA@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1603
Cds size507
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19106.4792.1prot_H-paniculata_contig19106.4792.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig19106 1700..2873 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929462.9133675-UTR-H-paniculata_contig19106:1102..16991622929462.9133675-UTR-H-paniculata_contig19106:1102..1699Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig19106 1103..1699 -
1691480872.133799-UTR-H-paniculata_contig19106:1102..16991691480872.133799-UTR-H-paniculata_contig19106:1102..1699Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig19106 1103..1699 -
1622929462.961241-UTR-H-paniculata_contig19106:2873..30491622929462.961241-UTR-H-paniculata_contig19106:2873..3049Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig19106 2874..3049 -
1691480872.1624355-UTR-H-paniculata_contig19106:2873..30491691480872.1624355-UTR-H-paniculata_contig19106:2873..3049Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig19106 2874..3049 -
1622929462.978647-UTR-H-paniculata_contig19106:3541..38641622929462.978647-UTR-H-paniculata_contig19106:3541..3864Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig19106 3542..3864 -
1691480872.1723905-UTR-H-paniculata_contig19106:3541..38641691480872.1723905-UTR-H-paniculata_contig19106:3541..3864Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig19106 3542..3864 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929462.9270496-CDS-H-paniculata_contig19106:1699..18101622929462.9270496-CDS-H-paniculata_contig19106:1699..1810Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19106 1700..1810 -
1691480872.1433423-CDS-H-paniculata_contig19106:1699..18101691480872.1433423-CDS-H-paniculata_contig19106:1699..1810Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19106 1700..1810 -
1622929462.941915-CDS-H-paniculata_contig19106:2477..28731622929462.941915-CDS-H-paniculata_contig19106:2477..2873Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19106 2478..2873 -
1691480872.1527643-CDS-H-paniculata_contig19106:2477..28731691480872.1527643-CDS-H-paniculata_contig19106:2477..2873Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19106 2478..2873 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig19106.4792.1

>prot_H-paniculata_contig19106.4792.1 ID=prot_H-paniculata_contig19106.4792.1|Name=mRNA_H-paniculata_contig19106.4792.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=169bp
MAVYDGLGFAGGMGSADITSVHWGCAPVSHARLYTGKEKIPTLAYEMIVD
HSGRVLSVTKGCEGSQIDKAIVRLKGYEGSQIDKAIVRLDKAISKVRKDE
PYVSTEFTLINADGTMTTHKDVFIIIDEGYHKWRILIYPMKSPGSAEAIL
WTHRLDSVRKDVGVSMAF*
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mRNA from alignment at H-paniculata_contig19106:1103..3864-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig19106.4792.1 ID=mRNA_H-paniculata_contig19106.4792.1|Name=mRNA_H-paniculata_contig19106.4792.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2762bp|location=Sequence derived from alignment at H-paniculata_contig19106:1103..3864- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATGGGGAGGTGGATGGGATGTTCGTCGATGTTCCACAGCAGGGGAAG TTAACCCGCCGGGTTAAGCCTAGGACCAATTACGAGCAGTCGACGTGGGG AAAGCTGCTAGGGCAGCTGCGGGAACTCTATGATCCGAAAGGTAGTGACG AGTTCGACCCTGTACTGGACCTGATGGTGGACTTTCGAGCTCGCTTCCGC ATCCCATACGACTTTTTCTTGAACATCATGGACGAGATCGAGGGCGTCGA TGGCAAGAAGCCATGGTTTGAGGTGGGGAAGATGGATGTTTCAGGGCGCC CTGGTGTCCCCATCAGGCTAAAGGTATGCCCGTTATGGTTAAAGTAGGTG CCAATAGCAGGTCGCATGTACTGCGGATGTGCAGGGGGAGTATTGCCATG GTGCAGTACAGTGCAATAGTAGTCTGTAGTACAGTACAGTACAGTACAGG CAGGAGAAGAACCCTAATGACGCACAGTACTTGTTACTGTACGATACGGT GAGTACTTGTTACTACTGTATTGTACCGTCAAAACTTGTTACTACTATAT AGTACGGCGGTTGTCTGAATTTAGGGTTGCTGCTGCTCCTGTTTCGGCCC CTACAGTACTCACTACTGTAATGTGCGGTACGATGGTACAAGTACTGTGT GTGTTTTGCTAGAAGGGCTGCTTTTGTGCTCCACCTAGTATCAAGCGAGT CTCCACTAACGATTATCTAGGTTGCTCTCCGCGTGTCGCCTCCACGGAAA AGGAGGCTAATCTCCACGTGTTTTTCGCTCCGCGTACACTTGTCGACATG CCCCTTCTGCCGCAGGTCCTGGGGGTCTTGCAAGTGTTGGGGAGAGGCAA CTGCTGCGACGACGCGACGCAGCTGCTGGCATGAGCGCTAAAACGGCATA AACGTTTTTCCATGCCTTCTGCGAGAAGTTTGTGCACGAGTTGTACGGCA CGTAGATCAAGCTGCCAGACGGAGGAGACCTGAAGCGCGTTATGGCCGTG TACGACGGGTTGGGGTTCGCTGGCGGGATGGGATCCGCGGATATTACTTC AGTCCACTGGGGCTGCGCGCCTGTTTCGCACGCCAGACTGTACACCGGGA AAGAGAAGATTCCCACACTGGCGTACGAGATGATCGTGGACCACTCGGGT CGAGTTCTCTCGGTTACCAAAGGGTGCGAGGGCTCTCAAATTGACAAGGC CATCGTGCGGCTGAAAGGGTACGAGGGCTCCCAAATTGACAAGGCCATCG TGCGGCTGGACAAGGCAATCTCGAAGGTTCGGAAGGACGAACCATACGTG TCCACCGAGTTCACCCTCATCAACGCGGACGGAACAATGACTACGCACAA AGATGTTTTCATCATCATCGACGAGGGATACCACAAGGTAAGGGAAGGTT GTGGTCGCTGCCGTCGAGCAGTTGCTAGTGTAATTTCGTACACCAGTACA TTTAAAACGGAGAGCAGGATGCATTGTACATCCTGCCCCATGACAACAGC CATCGCCCATCCACCAAAGAAGTCACAATATGAACACGCAAGGGATACAG ACACAAGGAACGTAGTTTTGCAAACTTTCGACGTTTGGGATAGCTTAGAA GTACGGACTTCTACATCACTTCGAAGTTAAGGTGCAAATATTGCACGGGT CTGAAGTAAGAAAAAAAAACAAGGCGGATTGTTGGTTGAGGTTTGACGAT TGCTGATATCGGATACTAACCATGCCCCGTGCAAAAGTGTGCTATTGGCA TTTTTCGCTTTATCGAATAACTGTAAATTTTCGTTCAAATTTAAAATCAA ATCGTTGTTTCGGTGTAAGGAAGCATATACCGCCAACTAGACATAATTAT GATGTTACCGTGCCCGATAGCCGCGAATTATCCAGCCATTGTGAAGACAA GAAGGCTGCCATAACAGCGGGGCCTCATAACCACGAACGAACTCTGTGTA TGCCGCCTGCTAAATTACCATCGTGCCTTTCCCCAGCCCCGCGGCACCCC CCCGTTCACTTCCTCCCCCCCCCCCCCCCCCCCCCCCATTCCTGGAAAAC ACAGTGGAGGATTCTCATTTACCCGATGAAAAGTCCTGGCTCGGCTGAGG CAATACTGTGGACGCACCGTCTGGACAGTGTGCGCAAGGACGTCGGTGTT TCTATGGCATTCTAAAACGCCGATTCCAGATTCTAAACGCGCCATCCCAT TTCAGAAAAAAGAGCAGATCGACAATGTCATGTGGACGTGCTGCATTCTA CACAACATGCTACACAAGTACGACAGCATGGAGGAGATGGACGGGAACTT GGAATGGGCTGGGGCGGACGGCAGCGTCGACGAGGCTGCCCAGCAGACTG GTGGGCTGTCCGCTGGTGCTGAGGCATGGGCGGAGCCCAACGTGACGGCC GTAGAGCACTTCGCGGCTAGGGCGAAGGAAAAATCAGTTTCTTTGTACCG GACGTGATATGTGCAGTGTAGGAAATGCAGTTTGGGAGAGACATGGAGGG AACGTGGTACACGTCTAGCGCGGGCGGTTGATGTGAGTTCGAGAGGTTAC TTGCCTGTAACGATCGTATGATGAGGGTGCGGGCGGTTGGGGACAGTTAG TGATGAGGGGTATGTTTACGATCAGGGTTAGCTTCTGGTTATTCGGGGGG TTTGTGTGTCGGGTATTTTTGCGATGGAAAGCACGGGCTCATTTCATCGA GCAGAGGAGTGTGCGAGCGGCGCTTTTTTTTTAATCAGTCAGTGGTTGTA TCGATCATAGCG
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Coding sequence (CDS) from alignment at H-paniculata_contig19106:1103..3864-

>mRNA_H-paniculata_contig19106.4792.1 ID=mRNA_H-paniculata_contig19106.4792.1|Name=mRNA_H-paniculata_contig19106.4792.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1014bp|location=Sequence derived from alignment at H-paniculata_contig19106:1103..3864- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCCGTGTACGACGGGTTGGGGTTCGCTGGCGGGATGGGATCCGCGGA
TATTACTTCAGTCCACTGGGGCTGCGCGCCTGTTTCGCACGCCAGACTGT
ACACCGGGAAAGAGAAGATTCCCACACTGGCGTACGAGATGATCGTGGAC
CACTCGGGTCGAGTTCTCTCGGTTACCAAAGGGTGCGAGGGCTCTCAAAT
TGACAAGGCCATCGTGCGGCTGAAAGGGTACGAGGGCTCCCAAATTGACA
AGGCCATCGTGCGGCTGGACAAGGCAATCTCGAAGGTTCGGAAGGACGAA
CCATACGTGTCCACCGAGTTCACCCTCATCAACGCGGACGGAACAATGAC
TACGCACAAAGATGTTTTCATCATCATCGACGAGGGATACCACAAGATGG
CCGTGTACGACGGGTTGGGGTTCGCTGGCGGGATGGGATCCGCGGATATT
ACTTCAGTCCACTGGGGCTGCGCGCCTGTTTCGCACGCCAGACTGTACAC
CGGGAAAGAGAAGATTCCCACACTGGCGTACGAGATGATCGTGGACCACT
CGGGTCGAGTTCTCTCGGTTACCAAAGGGTGCGAGGGCTCTCAAATTGAC
AAGGCCATCGTGCGGCTGAAAGGGTACGAGGGCTCCCAAATTGACAAGGC
CATCGTGCGGCTGGACAAGGCAATCTCGAAGGTTCGGAAGGACGAACCAT
ACGTGTCCACCGAGTTCACCCTCATCAACGCGGACGGAACAATGACTACG
CACAAAGATGTTTTCATCATCATCGACGAGGGATACCACAAGTGGAGGAT
TCTCATTTACCCGATGAAAAGTCCTGGCTCGGCTGAGGCAATACTGTGGA
CGCACCGTCTGGACAGTGTGCGCAAGGACGTCGGTGTTTCTATGGCATTC
TAATGGAGGATTCTCATTTACCCGATGAAAAGTCCTGGCTCGGCTGAGGC
AATACTGTGGACGCACCGTCTGGACAGTGTGCGCAAGGACGTCGGTGTTT
CTATGGCATTCTAA
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