mRNA_H-paniculata_contig19048.4773.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig19048.4773.1 vs. uniprot
Match: D8LEL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEL0_ECTSI) HSP 1 Score: 62.8 bits (151), Expect = 1.020e-9 Identity = 32/78 (41.03%), Postives = 45/78 (57.69%), Query Frame = 1
Query: 1 CFCGLATDDPFELGESTSCNMPCTGDADEICGGPNAINLYQFADYT----LEGCFVDSSVARVLTADATANGAMSTDV 222
C+CG D GEST C PC+GDAD++CGG +A N+Y F T L GC+ D S AR++ T +M+ ++
Sbjct: 141 CWCGSDGADYALHGESTECTYPCSGDADQLCGGFDAANVYLFTGETSTSSLVGCYQDESDARIMEFALTDTSSMTMEM 218
BLAST of mRNA_H-paniculata_contig19048.4773.1 vs. uniprot
Match: A0A177FBF7_9EURO (Uncharacterized protein n=1 Tax=Fonsecaea monophora TaxID=254056 RepID=A0A177FBF7_9EURO) HSP 1 Score: 61.2 bits (147), Expect = 1.310e-9 Identity = 33/100 (33.00%), Postives = 49/100 (49.00%), Query Frame = 1
Query: 1 CFCGLATDDPFELGESTSCNMPCTGDADEICGGPNAINLYQ------------FADYTLEGCFVDSSVA-RVLTADATANGAMSTDVRMNSLCRKRGSQF 261
C+CG P + T C MPC G+A ++CGGP+ +++Y A Y+ +GCF D S A R L +T+N T S C+ RG ++
Sbjct: 26 CYCGYGLS-PSTVVNVTGCTMPCAGNAQQMCGGPSRLSVYNNTSLSPPSAKAIIAGYSYQGCFTDPSAAQRTLQGYSTSNSTSMTQEFCVSACQTRGYKY 124
BLAST of mRNA_H-paniculata_contig19048.4773.1 vs. uniprot
Match: A0A3M7NB40_9EURO (Uncharacterized protein (Fragment) n=1 Tax=Chaetothyriales sp. CBS 135597 TaxID=2249420 RepID=A0A3M7NB40_9EURO) HSP 1 Score: 62.8 bits (151), Expect = 1.580e-9 Identity = 35/85 (41.18%), Postives = 44/85 (51.76%), Query Frame = 1
Query: 1 CFCG--LATDDPFELGESTSCNMPCTGDADEICGGPNAINLYQ-----------FADYTLEGCFVDSSVARVLTADATANGAMST 216
CFCG LA S CNMPCTGD+ + CGGP+ ++LYQ F+ YT +GC+ DS R LTA T + T
Sbjct: 1197 CFCGNTLAAGST-NASSSAECNMPCTGDSTQTCGGPSRLSLYQNTAYTPLQSPSFSGYTYQGCYTDSVDNRTLTAARTDSSTAMT 1280
BLAST of mRNA_H-paniculata_contig19048.4773.1 vs. uniprot
Match: A0A0D2GGW7_XYLBA (Uncharacterized protein n=2 Tax=Cladophialophora TaxID=82105 RepID=A0A0D2GGW7_XYLBA) HSP 1 Score: 62.8 bits (151), Expect = 1.590e-9 Identity = 33/100 (33.00%), Postives = 51/100 (51.00%), Query Frame = 1
Query: 1 CFCGLATDDPFELGESTSCNMPCTGDADEICGGPNAINLYQ------------FADYTLEGCFVDSSVA-RVLTADATANGAMSTDVRMNSLCRKRGSQF 261
C+C + P + +T C+MPC G+A ++CGGP+ +++Y YT +GCF D S A R L +T+NG T S C+ RG ++
Sbjct: 1687 CYCAYSLS-PSTVLNATGCSMPCAGNAQQMCGGPSRLSVYNNTSLSPPSVKASIGGYTYQGCFTDPSAAQRTLQGYSTSNGTSMTQEFCISACQARGYKY 1785
BLAST of mRNA_H-paniculata_contig19048.4773.1 vs. uniprot
Match: A0A0D2FB61_9EURO (Uncharacterized protein n=1 Tax=Fonsecaea pedrosoi CBS 271.37 TaxID=1442368 RepID=A0A0D2FB61_9EURO) HSP 1 Score: 62.4 bits (150), Expect = 2.170e-9 Identity = 33/100 (33.00%), Postives = 50/100 (50.00%), Query Frame = 1
Query: 1 CFCGLATDDPFELGESTSCNMPCTGDADEICGGPNAINLYQ------------FADYTLEGCFVDSSVA-RVLTADATANGAMSTDVRMNSLCRKRGSQF 261
C+CG P + +T C MPC G+A ++CGGP+ +++Y A Y+ +GCF D S A R L +T+N T S C+ RG ++
Sbjct: 1692 CYCGYGLS-PSTVVNATGCTMPCAGNAQQMCGGPSRLSVYNNTSLSPPSAKAIIAGYSYQGCFTDPSAAQRTLQGYSTSNSTSMTQEFCVSACQTRGYKY 1790
BLAST of mRNA_H-paniculata_contig19048.4773.1 vs. uniprot
Match: A0A0D2AF73_9EURO (Uncharacterized protein n=1 Tax=Cladophialophora immunda TaxID=569365 RepID=A0A0D2AF73_9EURO) HSP 1 Score: 62.4 bits (150), Expect = 2.170e-9 Identity = 35/100 (35.00%), Postives = 50/100 (50.00%), Query Frame = 1
Query: 1 CFCGLATDDPFELGESTSCNMPCTGDADEICGGPNAINLYQ------------FADYTLEGCFVDSSVA-RVLTADATANGAMSTDVRMNSLCRKRGSQF 261
C+CG T P +T CNMPC G+A + CGGP+ +++Y A YT +GCF D S + R L +T+N T S C+ RG ++
Sbjct: 1697 CYCGY-TLAPSTAVNATGCNMPCAGNAQQTCGGPSRLSVYNNTSLSPPGAKATIAGYTHQGCFTDPSASQRTLQGYSTSNATSMTQEFCISACQTRGYKY 1795
BLAST of mRNA_H-paniculata_contig19048.4773.1 vs. uniprot
Match: UPI0018EC2E0B (WSC domain-containing protein n=1 Tax=Pseudomonas sp. ASV14 TaxID=243969 RepID=UPI0018EC2E0B) HSP 1 Score: 59.7 bits (143), Expect = 2.220e-9 Identity = 29/96 (30.21%), Postives = 51/96 (53.12%), Query Frame = 1
Query: 1 CFCGLATDDPFELGESTSCNMPCTGDADEICGGPNAINLYQF------------ADYTLEGCFVDSSVARVLTADATANGAMSTDVRMNSLCRKRG 252
C+CG + E + + CN+PC+GD + CGG NA+++++ +DY +GC+ DS R LT A +G+ T + + C+++G
Sbjct: 31 CYCGGSV--RSEKTDESQCNLPCSGDKSQTCGGDNALSVWEDPTFSQTPEEVSESDYAAQGCYTDSGSGRALTWPAEIDGSDLTPSKCIAACKEQG 124
BLAST of mRNA_H-paniculata_contig19048.4773.1 vs. uniprot
Match: A0A8H5F657_9AGAR (Uncharacterized protein n=1 Tax=Psilocybe cf. subviscida TaxID=2480587 RepID=A0A8H5F657_9AGAR) HSP 1 Score: 61.6 bits (148), Expect = 3.770e-9 Identity = 31/69 (44.93%), Postives = 37/69 (53.62%), Query Frame = 1
Query: 55 CNMPCTGDADEICGGPNAINLYQFADYTLEGCFVDSSVARVLTADATANGAMSTDVRMNSLCRKRGSQF 261
CNM CTGDA E CGGPN I + A ++ GCF D + R L AT + A T + S C G QF
Sbjct: 38 CNMECTGDATETCGGPNRIITFSNAGWSSVGCFTDQAPERTLITAATTDPAGMTIEKCASFCMPLGFQF 106
BLAST of mRNA_H-paniculata_contig19048.4773.1 vs. uniprot
Match: A0A3M0W0T4_9EURO (Uncharacterized protein (Fragment) n=1 Tax=Chaetothyriales sp. CBS 134920 TaxID=2249417 RepID=A0A3M0W0T4_9EURO) HSP 1 Score: 60.5 bits (145), Expect = 1.020e-8 Identity = 34/83 (40.96%), Postives = 43/83 (51.81%), Query Frame = 1
Query: 1 CFCG--LATDDPFELGESTSCNMPCTGDADEICGGPNAINLYQ-----------FADYTLEGCFVDSSVARVLTADATANGAM 210
CFCG LA S CNM C+GDA EICGGP+ ++LY+ F+ Y +GC+ DS R L A T + AM
Sbjct: 906 CFCGNTLAAGST-NASSSAECNMACSGDASEICGGPSRLSLYENTAYSTPQSPSFSGYIYQGCYTDSVANRSLAAARTDSNAM 987
BLAST of mRNA_H-paniculata_contig19048.4773.1 vs. uniprot
Match: A0A8H5BLQ2_9AGAR (Uncharacterized protein n=1 Tax=Psilocybe cf. subviscida TaxID=2480587 RepID=A0A8H5BLQ2_9AGAR) HSP 1 Score: 59.7 bits (143), Expect = 1.830e-8 Identity = 31/72 (43.06%), Postives = 40/72 (55.56%), Query Frame = 1
Query: 55 CNMPCTGDADEICGGPNAINLYQF---ADYTLEGCFVDSSVARVLTADATANGAMSTDVRMNSLCRKRGSQF 261
C+M CTGDA E CGGPN +N+++ A +T GCF D + R L AT + A T + S C G QF
Sbjct: 79 CDMECTGDATETCGGPNRLNIFKRTIPAGWTSVGCFTDQAPERTLITAATTDPAGMTIEQCASFCTPLGFQF 150 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19048.4773.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig19048.4773.1 >prot_H-paniculata_contig19048.4773.1 ID=prot_H-paniculata_contig19048.4773.1|Name=mRNA_H-paniculata_contig19048.4773.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=87bp CFCGLATDDPFELGESTSCNMPCTGDADEICGGPNAINLYQFADYTLEGCback to top mRNA from alignment at H-paniculata_contig19048:4725..4985- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig19048.4773.1 ID=mRNA_H-paniculata_contig19048.4773.1|Name=mRNA_H-paniculata_contig19048.4773.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=261bp|location=Sequence derived from alignment at H-paniculata_contig19048:4725..4985- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig19048:4725..4985- >mRNA_H-paniculata_contig19048.4773.1 ID=mRNA_H-paniculata_contig19048.4773.1|Name=mRNA_H-paniculata_contig19048.4773.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=522bp|location=Sequence derived from alignment at H-paniculata_contig19048:4725..4985- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |