mRNA_H-paniculata_contig18919.4727.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig18919.4727.1 vs. uniprot
Match: D8LLG8_ECTSI (Short-chain dehydrogenase/reductase SDR n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLG8_ECTSI) HSP 1 Score: 265 bits (677), Expect = 1.080e-80 Identity = 172/389 (44.22%), Postives = 211/389 (54.24%), Query Frame = 1
Query: 358 GGGDGDFTVDNKEVLHAVVTGANRGLGFAIADEMVSLG-HRTVLACRDKNEGDAALERIRSHWPRQLAE---------LASVHQLDVASADSIRTFQKNCVEGQLGGRVDILFNNAAVCFEGRD-----------SAVVDHTLAVNVFGAVDVMKACLPAMCG-----------------------------HEATVVWVSSGDGELCFLGSKWQGILREASTVEEVISYLTDLQDVA------------------KTEKWQHQQEEIAFGPTPIYSLSKAAANAVVRTLAPSLQDSS----------------GGGVRLVAVCPGDVLTRMFSMTEATTAAFGTGADEEHSRPLLPEEAARVVTDVALRSF-DFPCGRFYRNGKEIGW 1269
GGGD D + + +VTGANRGLGFAIAD M+ LG +R VLACR++ EG ALER+R ++ LAS LDV S+ F+++CV G LGGRVDILFNNA VCF +D + ++ TLAVN FGA++V++AC+PA+ TVVW+SSGDGELCFLGSKW+G+L EA ++E+V S L+DL A + E Q Q EE+AFGPTP YSLSKAA NA VRT AP +Q + GGGVRLVAVCPGDVLTRM S E + PEEAA V D+AL S D P GRFYR+G+EIGW
Sbjct: 45 GGGD-----DGGILRNVIVTGANRGLGFAIADRMLKLGSYRVVLACRNEQEGRDALERLRGKQQQRRQRQYGTIATNFLASFFPLDVTCPRSVEVFREDCVNGHLGGRVDILFNNAGVCFPEQDGNGPQNNRAAAAGILRETLAVNFFGALEVVEACVPALQAAAPMVARKEKKKAALMLEDNGATSTMTSLKPPTVVWISSGDGELCFLGSKWRGLLAEAQSLEDVKSPLSDLLATATDTITTTSKQNSTAPAGSQQEGEQGQVEEMAFGPTPAYSLSKAAVNAAVRTWAPCIQAPTVPAEAPENTKSRTGVRGGGVRLVAVCPGDVLTRMTSKEEMA-----------RGDAVSPEEAAVEVVDLALSSANDIPAGRFYRHGEEIGW 417
BLAST of mRNA_H-paniculata_contig18919.4727.1 vs. uniprot
Match: A0A835YS44_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS44_9STRA) HSP 1 Score: 157 bits (398), Expect = 1.420e-40 Identity = 116/312 (37.18%), Postives = 152/312 (48.72%), Query Frame = 1
Query: 391 KEVLHAVVTGANRGLGFAIADEMVSLGHRTVLACRDKNEGDAALERIRSHWPRQLAELASVHQLDVASADSIRTFQKNCVEGQLGGRVDILFNNAAVCFEGRDSAVVDHTLAVNVFGAVDVMKACLPAMCGHEATVVWVSSGDGELCFLGSKWQGILREASTVEEVISYLTDLQDVAKTEKWQHQQEEIAFGPTPIYSLSKAAANAVVR--------------TLAPSLQDSSGGGVR-----LVAVCPGDVLTRMFSMTEATTAAFGTGADEEHSRPLLPEEAARVVTDVALRSFDFPCGRFYRNGKEIGW 1269
+E A+VTGA+RGLG A+A +V + +L R + +G A + +H Q + QLDV+S DSI+ F C+ G + +FNNA VC G D A + ++L VN +G + VM+ACLP M E VV VSSGDGEL +L S LR+A TV++V + D+ A + E+AFG TP YS+SKA NA VR L S GGG ++AVCPGDV T M S EA + L EAA V +A G FYR G I W
Sbjct: 44 RECKTALVTGASRGLGLAVATLLVQQDYHVILTARSEADGLKAASDLSAHC--QGTGEITFRQLDVSSPDSIKHFATQCLPTLPSGSLTAVFNNAGVCLPGADIATLQYSLGVNFYGPLRVMEACLPFM-DEEGVVVNVSSGDGELLWLNSDIAEALRQAQTVQDVRAAADDILQRAALDPGA----ELAFGATPAYSVSKALLNAAVRCRHGIPYAPDPAEGALNAGRASSRGGGSTAQRPAVIAVCPGDVRTLMASEEEA-----------QREGVLSALEAAAHVVGLATWRERTAGGLFYRYGAVIPW 337
BLAST of mRNA_H-paniculata_contig18919.4727.1 vs. uniprot
Match: A0A7S1GWA1_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GWA1_HEMAN) HSP 1 Score: 141 bits (355), Expect = 3.290e-35 Identity = 106/288 (36.81%), Postives = 148/288 (51.39%), Query Frame = 1
Query: 415 TGANRGLGFAIADEMVSLGHRTVLACRDKNEGDAALERIRSHWPRQLAELASVHQLDVASADSIRTFQKNCVEGQLGGRVDILFNNAAVCFEGRDSAVVDHTLAVNVFGAVDVMKACLPAMCGHEATVVWVSSGDGELCFLGSKWQGILREASTVEEVISYLTDLQDVAKTEKWQHQQEEIAFGPTPIYSLSKAAANAVVRTLAPSLQDSSGG---GVRLVAVCPGDVLTRMFSMTEATTAAFGTGADEEHSRPLLPEEAARVVTDVALRSFDFPCGRFYRNGKEIGW 1269
TG NRGLG A+A E+ G + +A R+ ++ SV QLDV S+ + C++G+L D+L +NA VC EG D ++ DH + VN FGA+ +++A PAM VV +SSG+GEL +L S+ Q +L +V+E+ + D A+ EE+AFGPTP YS+SKA NA+ R LA S + S GVR AVCPGDV T M ++ +E L PE+AA V VAL + G F+R+ I W
Sbjct: 1 TGGNRGLGRALAWELAREGLQVWVAARNXXXXXXXXXXXXXXXX----DVESV-QLDVGCDASVGGVAEQCLDGRLPVP-DLLISNAGVCLEGSDRSIFDHAMQVNFFGALRMIRALAPAMRRKGGCVVNISSGEGELVYLCSRLQELLPSIESVDELCRVMEACIDDAEG------GEELAFGPTPSYSVSKAGLNALTRILACSTRGSPHDHTLGVR--AVCPGDVDTAMCTL-------------DEKDGVLSPEQAAIDVVWVALHPEECANGGFFRHRDSIPW 261
BLAST of mRNA_H-paniculata_contig18919.4727.1 vs. uniprot
Match: A0A7S2XFG2_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XFG2_9EUKA) HSP 1 Score: 135 bits (339), Expect = 1.840e-32 Identity = 101/304 (33.22%), Postives = 152/304 (50.00%), Query Frame = 1
Query: 409 VVTGANRGLGFAIADEMVSLGHRTVLACRDKNEGDAALERIRSHWPRQLAELASVHQLDVASADSIRTFQKNCVEGQLGGRVDILFNNAAVCFEGRDSAVVDHTLAVNVFGAVDVMKACLPAMC---------GHEATVVWVSSGDGELCFLGSKWQGILREASTVEEVISYLTDLQDVAKTEKWQHQQE---EIAFGPTPIYSLSKAAANAVVRTLAPSLQDSSGGGVRLVAVCPGDVLTRMFSMTEATTAAFGTGADEEHSRPLLPEEAARVVTDVAL---RSFD--FPCGRFYRNGKEIGW 1269
+VTG RGLG+AIA+ M G+ V+A RD+N G+ A I+ + S +LD+ +A+SI F++ C GG VD+LFNNAAVC EG + V + +NV G + +++ + + V+ VSS +GEL +L S L AS ++ + + L+ + Q+ + E AFGPTP YS+SKAA A+ + LA +D G + AVCPGDV T M + E+ S + P EA+ V +AL R D G+F+R +++ W
Sbjct: 24 IVTGGTRGLGYAIAERMARRGYDVVIAGRDENIGNEAATNIQRSISTRGVGTVSYRKLDLENAESINNFRQWCRRNVEGG-VDVLFNNAAVCLEGSNVEVARSSFQINVIGPLALVEGLMEQQKMDDRRERRKSTQRCVINVSSSEGELGYLHSSLAEALLTASASDDPQAVIRVLESI------QNDFDPLLEYAFGPTPFYSVSKAALIALTQVLA--RRDPDGRSFAVHAVCPGDVSTSMMT-------------PEQESHAVSPAEASEDVVWLALAHPRRADGKLDHGKFWRYREQVEW 305
BLAST of mRNA_H-paniculata_contig18919.4727.1 vs. uniprot
Match: A0A7S0BP00_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BP00_9RHOD) HSP 1 Score: 122 bits (305), Expect = 4.540e-28 Identity = 93/290 (32.07%), Postives = 142/290 (48.97%), Query Frame = 1
Query: 406 AVVTGANRGLGFAIADEMVSLGHRTVLACRDKNEGDAALERI-RSHWPRQLAELASVHQLDVASADSIRTFQKNCVEGQLGGRVDILFNNAAVCFEGRDSAVVDHTLAVNVFGAVDVMKACLPAMCGHEATVVWVSSGDGELCFLGSKWQGILREASTVEEVISYLTDLQDVAKTEKWQHQQEEIAFGPTPIYSLSKAAANAVVRTLAPSLQDSSGGGVRLVAVCPGDVLTRMFSMTEATTAAFGTGADEEHSRPLLPEEAARVVTDVALRS-FDFPCGRFYRNGKEIGW 1269
A+VTGA RGLG AI + + L H +L RD +G A R + + EL H+ SA+++ V Q G +D++ NNAAVC E S+ + L VN+FGAV + CL + G +A +V VSSGDGE +L + + + + + ++ L +L + A + +E+ G P Y +SK A N R L L +S G+R++AVCPGDV T G + SR P +AA+ + ++ + + G FYR+ + I W
Sbjct: 8 ALVTGATRGLGLAIVEVLAGLDHHVLLTGRDVEKGCAEAGSFQRKGFDVRFLELDVCHE---RSAENLALV----VRDQYGA-LDVIVNNAAVCLEDWSSSALMDCLEVNLFGAVRTVS-CLGQLLGEDACIVNVSSGDGESVWLSTAVRERFEKVQSTKVLLDVLRELAEKADS----LPSQEVVHGEQPTYKVSKFALNCYTRLLHNDLNES---GIRVLAVCPGDVRT---------------GMNPSASR--CPSDAAKAIVELVVGGPSTYQSGGFYRDCEIISW 264
BLAST of mRNA_H-paniculata_contig18919.4727.1 vs. uniprot
Match: A0A7S2ZT12_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZT12_9RHOD) HSP 1 Score: 117 bits (293), Expect = 2.180e-26 Identity = 90/290 (31.03%), Postives = 135/290 (46.55%), Query Frame = 1
Query: 406 AVVTGANRGLGFAIADEMVSLGHRTVLACRDKNEGDAALERI-RSHWPRQLAELASVHQLDVASADSIRTFQKNCVEGQLGGRVDILFNNAAVCFEGRDSAVVDHTLAVNVFGAVDVMKACLPAMCGHEATVVWVSSGDGELCFLGSKWQGILREASTVEEVISYLTDLQDVAKTEKWQHQQEEIAFGPTPIYSLSKAAANAVVRTLAPSLQDSSGGGVRLVAVCPGDVLTRMFSMTEATTAAFGTGADEEHSRPLLPEEAARVVTDVALRS-FDFPCGRFYRNGKEIGW 1269
A+VTGA RGLG AI +E+ L H +L RD +G R + + EL D SA+++ V Q G +D++ NNAAVC E S+ + + L VN FGAV + ACL + +A ++ VSSGDGE + + + + ++ L D + A EE+ G P Y +SK A N R L L +S G+R+++VCPGDV TRM S P +AA+ + ++ + + G F+R+ + I W
Sbjct: 8 ALVTGATRGLGLAIVEELAGLNHHVLLTGRDVEKGYVEAGSFQRKGFDVRFLEL---DVCDERSAENLALV----VRDQYGA-LDVIVNNAAVCLEEWSSSALTNCLEVNFFGAVRTV-ACLGQLLAKDACILNVSSGDGESVWFSTAVRERFEGVQSTNALLDALRDFAEKADAVP----PEEVVHGEQPTYKVSKFALNCYTRLLHNDLNES---GIRVLSVCPGDVRTRM-----------------NPSASRSPSDAAKAIAELVVGGPSTYQSGSFFRDREVISW 264
BLAST of mRNA_H-paniculata_contig18919.4727.1 vs. uniprot
Match: R1DJ38_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DJ38_EMIHU) HSP 1 Score: 122 bits (305), Expect = 3.450e-26 Identity = 101/287 (35.19%), Postives = 130/287 (45.30%), Query Frame = 1
Query: 406 AVVTGANRGLGFAIADEMVSLGHRTVLACRDKNEGDAALERIRSHWPRQLAELASVHQLDVASADSIRTFQKNCVEGQLGGRVDILFNNAAVCFEGRDSAVVDHTLAVNVFGAVDVMKACLPAMCGHE-ATVVWVSSGDGELCFLGSKWQGILREASTVEEVISYLTDLQDVAKTEKWQHQQEEIAFGPTPIYSLSKAAANAVVRTLAPSLQDSSGGGVRLVAVCPGDVLTRMFSMTEATTAAFGTGADEEHSRPLLPEEAARVVTDVALRSFDFPCGRFYRNGKEI 1263
A+VTGANRG+G A A + LG VLACRD++ A E + R LA D S C RVD+L NNAAVC G V + NV + +A LP M V+ VSSGDGEL FL S L A++ E++ L L + ++ A GPTP YS+SKAA N R + +L GGV + A CPGDV TRM S A A ++ +R L + A R + GRF+R G+ I
Sbjct: 296 ALVTGANRGIGLATAGRLAELGASVVLACRDES---ACREAAAALSVRGLAAEPYAASFDAECPRSTSALAAACASL----RVDLLVNNAAVCEPGWGRDVALRSFRTNVLAPATLTRAVLPGMLRRRRGAVLHVSSGDGELVFLSSDLAPRLAGAASERELLRLLARLS--RGRDGFRFPDRPPAHGPTPAYSVSKAALNRHTRLVGDALPRD--GGVWVGAACPGDVRTRMCSCERHEGVASPESAADDLAR-LAAGALGGXXXEAAARRLE--SGRFWRAGRTI 568
BLAST of mRNA_H-paniculata_contig18919.4727.1 vs. uniprot
Match: A0A1C6W2U0_9ACTN (Short-chain dehydrogenase n=1 Tax=Micromonospora citrea TaxID=47855 RepID=A0A1C6W2U0_9ACTN) HSP 1 Score: 115 bits (289), Expect = 4.120e-26 Identity = 104/296 (35.14%), Postives = 133/296 (44.93%), Query Frame = 1
Query: 406 AVVTGANRGLGFAIADEMVSLGHRTVLACRDKNEGDAALERIRSHWPRQLAELASVHQLDVASADSIRTFQKNCVEGQLGGRVDILFNNAAVCFE------GRDSAVVDHTLAVNVFGAVDVMKACLPAMCGHEA--TVVWVSSGDGELCFLGSKWQGILREASTVEEVISYLTDLQDVAKTEKWQHQQEEIAFGPTPIYSLSKAAANAVVRTLAPSLQDSSGGGVRLVAVCPGDVLTRMFSMTEATTAAFGTGADEEHSRPLLPEEAARVVTDVALRSFDFPCGRFYRNGKEIGW 1269
AVVTGANRG+G A+A ++ G+RTVLA RD G AA R+L A+V QLDVA ADS+ F + + GRVD+L NNAAV ++ G D +V TL VN GA V +A P M H +V VSS G L TD+ TP Y++SKAA NA+ R LA L G+ + +VCPG V T M T T A G AA V+ V + D P G F+R+G+ + W
Sbjct: 11 AVVTGANRGIGKAVAAQLARDGYRTVLAVRDPARGRAAA--------RELPAQATVEQLDVADADSVARFARRLRDRY--GRVDVLVNNAAVNYDTWQDPLGADLDLVRDTLDVNAIGAWRVSQALAPLMRRHSPGRRIVNVSSESGSL------------------------TDM-----------------HAATPAYAMSKAALNALTRLLAAQLAPD---GILVNSVCPGWVATDMGGPTAPRTPAQG---------------AASVLWAVRIPD-DGPTGGFFRDGQPLPW 236
BLAST of mRNA_H-paniculata_contig18919.4727.1 vs. uniprot
Match: A0A561WXG8_9ACTN (Short-subunit dehydrogenase n=2 Tax=Micromonospora TaxID=1873 RepID=A0A561WXG8_9ACTN) HSP 1 Score: 114 bits (285), Expect = 1.430e-25 Identity = 99/296 (33.45%), Postives = 130/296 (43.92%), Query Frame = 1
Query: 406 AVVTGANRGLGFAIADEMVSLGHRTVLACRDKNEGDAALERIRSHWPRQLAELASVHQLDVASADSIRTFQKNCVEGQLGGRVDILFNNAAVCFE------GRDSAVVDHTLAVNVFGAVDVMKACLPAMC--GHEATVVWVSSGDGELCFLGSKWQGILREASTVEEVISYLTDLQDVAKTEKWQHQQEEIAFGPTPIYSLSKAAANAVVRTLAPSLQDSSGGGVRLVAVCPGDVLTRMFSMTEATTAAFGTGADEEHSRPLLPEEAARVVTDVALRSFDFPCGRFYRNGKEIGW 1269
AVVTGANRG+G A+ +++ G TVLACRD G+AA + R L V +LDV DS+R F + GRVD+L NNA + ++ G D VV VN GA+ V +A LP + G +V VSSG G L +G+ TP Y++SKAA NAV R A L G+ + +VCPG V T M G G RP+ E AA V+ V L D P G F+R+G+ + W
Sbjct: 7 AVVTGANRGIGLAVVQQLLDRGFVTVLACRDTGRGEAAAATLTPAPGRVL-----VRRLDVGDDDSVRAFAAGLADAP--GRVDVLVNNAGIHYDTDQDPAGADVGVVREAFEVNALGALKVSQAVLPLLRRQGPGRRIVNVSSGAGSLSSMGAG-----------------------------------------TPAYAISKAALNAVTRLFAAQLAPD---GILVNSVCPGWVATDM----------GGRGG-----RPVA-EGAASVLWAVDLPD-DGPTGGFFRDGRPVPW 234
BLAST of mRNA_H-paniculata_contig18919.4727.1 vs. uniprot
Match: A0A7S0NQP3_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NQP3_9EUKA) HSP 1 Score: 114 bits (286), Expect = 2.690e-25 Identity = 100/297 (33.67%), Postives = 132/297 (44.44%), Query Frame = 1
Query: 406 AVVTGANRGLGFAIADEMVSLGHRTVLACRDKNEGDAALERIRSHWPRQLAELASVHQLDVASADSIRTFQKNCVEGQLGGRVDILFNNAAVCFEGRDSAVVDHTLAVNVFGAVDVMK-----ACLPAMCGHEATVVWVSSGDGELCFLGSKWQGILREASTVEEVISYLTDLQDVAKTEKWQHQQEEIAFGPTPIYSLSKAAANAVVRTLAPSLQDSSGG------GVRLVAVCPGDVLTRMFSMTEATTAAFGTGADEEHSRPLLPEEAARVVTDVALRSFDFPCGRFYRNGKEI 1263
AVVTGANRGLG A+A + G +L RD + S L A LDV+ S+R F ++C Q ++L NNAAVC G VV +L NV G + + + C V+ VSSGDGEL +L S Q R AS+V ++ L + T Q A PTP YS+SKAA NA+ R LA + +GG V AVCPGDV TRM S+ E L + AA + + + P G+F+R + I
Sbjct: 5 AVVTGANRGLGAALARCLAMSGCSVLLTGRDAPAVGRLAATLASTG---LPAFAYPAALDVSDMRSVRNFAEHCARSQ--AVPEVLINNAAVCERGWTRQVVRRSLKTNVIGPLALCRELGAVGCAAPRRARRLRVLNVSSGDGELVYLNSALQDEFRRASSVRTLLQLLARV-----TPPRQTIGGAPAHSPTPAYSVSKAALNALTRILA---GEHAGGTSELCASVWFAAVCPGDVSTRMCSI--------------EPREALSADAAAHDLVWLLRHAEALPSGKFWRQCEAI 274 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18919.4727.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig18919.4727.1 >prot_H-paniculata_contig18919.4727.1 ID=prot_H-paniculata_contig18919.4727.1|Name=mRNA_H-paniculata_contig18919.4727.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=386bp MIFGLHKSWVVMVSLGASPLPPSWKTGGNSWRARTPSSRQQRGCDGNGCHback to top mRNA from alignment at H-paniculata_contig18919:2004..4276+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig18919.4727.1 ID=mRNA_H-paniculata_contig18919.4727.1|Name=mRNA_H-paniculata_contig18919.4727.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2273bp|location=Sequence derived from alignment at H-paniculata_contig18919:2004..4276+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig18919:2004..4276+ >mRNA_H-paniculata_contig18919.4727.1 ID=mRNA_H-paniculata_contig18919.4727.1|Name=mRNA_H-paniculata_contig18919.4727.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2316bp|location=Sequence derived from alignment at H-paniculata_contig18919:2004..4276+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |