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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | ENTH/VHS |
| Ec32 ortholog | Ec-21_004690.2 |
| Exons | 2 |
| Model size | 1856 |
| Cds size | 1788 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1891.4724.1 >prot_H-paniculata_contig1891.4724.1 ID=prot_H-paniculata_contig1891.4724.1|Name=mRNA_H-paniculata_contig1891.4724.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=596bp
MGAADQGILVPYTGGGGGGVEGFGSETTTSNFPSGTTASNVPSETGAVFG
SNNVGSSYGGSNYGGAQHHDPFASFQPVSGAPAPDVQAPIAPGAPAPVHV
SSFAAFGESQSSNASSATSSTAPNRQPASDFATWMSSVRGSLPTTDPFAA
AQQTVAANGTVGGGGGGIGLGGSGAAAASGVRQMRFETSESTSFHSSNGG
FIASPNLGPIAETSPATDGNPFEIPLPPAPGAARNGGASPGVLNGATVNR
TIDVSDPFSLVTANSFATPRGSVDGGGGGGRISRGFPQVSQALVPISSGA
QSSVSTSSSSSLTAFPSANQALPQQQAQPPQRHSQQQQQQQQQWWQPSPQ
RQQHKPQPQPLHRQSQPPVNRHSQQSFAAANEPFAGAILPAGSTNFGSVT
DNDPYTQPQTQSRVSTSSRVASFGASGAGAAAGSGSFESGTGHYPRNSFD
SVSSLVQGSVFASGGGGGGMLGSQQTSGGGGGTGGETPRKFNPFDDPAAG
AAPGYSTPQQAPLLQQRPRRQQQQQPQQSWAQQQHFPQRTSFQPAGQQAQ
FQHYGSGVKGRGHGQRGSLQQQLSAQQQPSPSAQQQQPPQQNYLV* back to topmRNA from alignment at H-paniculata_contig1891:8354..12418- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1891.4724.1 ID=mRNA_H-paniculata_contig1891.4724.1|Name=mRNA_H-paniculata_contig1891.4724.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4065bp|location=Sequence derived from alignment at H-paniculata_contig1891:8354..12418- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGGGATGGGGGCCGCGGACCAAGGCATACTGGTTCCATACACCGGTGGCG
GCGGGGGTGGGGTGGAGGGATTCGGCAGCGAAACTACCACCAGTAATTTC
CCGAGCGGGACCACTGCCAGTAACGTTCCCAGTGAGACGGGAGCGGTTTT
CGGGAGCAACAACGTCGGCAGCAGCTACGGGGGTAGCAATTATGGAGGAG
CGCAACATCATGGTGAGAGGGAGAGGGAAAGGATAGGCACTACTGCTATT
GCAGAGGCTGGGTTACAGATGGGCACCGGCTACTGTAAGAAAGTAACGGC
TCATAGAGGGTTGTTGAAACGGTAACTAGGCAAATCGGTGTATCCGTTCT
CGATTTCACTACCCGGTGCCAACTCCATGAAGCTGGGACCGACCAGGTAA
AACCGGCTCAAGGTCGTGTTTTTTTTAATGGCCCAGTTGGCAAATTGGTC
CACGGGTCCTCGATTTTCTTAGTTGATGCCGATCTACAGTACGCTACGTC
GAGTTACATATTTGTCATCAAGTTTGCCGTGTGTCAAGACCAGTCTCGGG
GGAGGGCGAACGGGTAAAGGGGGCATAGATCGACATGCCAGGGAGAAGAG
ATGAGAACTTCGGAGTTCTTTTGATGTTACTGTACCTTACTCGTTGTTTT
GTTTTGTGTCATTTTGTCGCGTTCGAATTGCCGGCGTACATGCGCCCTGA
TATAGCAACGACTTGACTGAGTTCCGCATAGTTAGTTTTCGAGCTCTCGC
TGACCGTTAGAGGCAGTAAAATGACCGGATATCGGAAATTAGATCGGTTC
GGAAAAGGAAAAAAACATGTTGAACATCTCCGGTTTAAAGTGGCGTCACG
CCGACGCCCACTTAGAATCAGTATAGTTGATATTGGTATTGTTCTTGGAT
GTGCGTTCATCTTATGAAATGCAAGGTTTCATGCCATGATACCAATATCA
GCAAATTCGTACAACCAAGGGCTACAATAGGTATAAACCAGAATTTTTGA
CGCTTCGGGAAAAATGCGAGAGAAGGTCATTTTATACTACTTCTTGAGGG
TAATGCTGCTGCAAGTTGAAACTTTCCTGTGGGATGCAGAATTGACTTTA
AGGAATTTGTAGCTGAGGTTTGGCGCATACCGCTCACCAATTGGCACTGG
AAACATTGTAGTAGTTCAGATGTTGGAGCGTTCGCCAAATGGGGAAGCCA
GGCCAAACCCGAAAGGCTGCTGTCGGACAGTACTTGATGCACAGCAAGAA
AGATTTTTAAAAGTACATGGTAGTTTATAGATGACTAGTCATCTTGAAAA
CTGGTGGGTTGATATGCACCTGCTTGTATTACAAAGGAACCAGAATAACA
CGCGTTGAGGATTGACGTGACTTTTCAATCGAGACCAACAAACTACGAGA
TACTACGGGTCGTAATGGAACTTGATGTGTATGCATTGGTCTCGTGTTGC
TCGTGCACGAACCGCCGACGGCCCACGCTGCACCATCTTGACCAACAGTC
AGTGCTGTCAGTAAGTGCGTTGATCATACATGCGGGTCTGACTGAAAAGA
TCCAGACACAATATTTTATATGAAATTTAGTGTGGTACACGGCTGTAGCG
GTACAGAACGGTTTTTTACTACGAGTTTGAGTTTTAGTCTAGCCCGTTGG
AAAGCATGGAATGCATGCAACAACTTTTCACTTTTTGCCGGTCCATTTAC
AATTTTTGAGCGCCGGCGCTCCCGCTTTGAAAGAGCTTGGGGACCTGGAA
CTTGGGCACGCGTCCGTCACTTGTGTTTCAATGACGCGCGACGCGCGTGA
ATGGTGTTTATGGCCAAGAGTTTTGTATTGGTGGAAATCGCTGCGGTTAT
TGAGATACAATTTGCAGCTAGCAATATCTCACATCGGCAGTTTTTCAGCG
GATAACCGTGAGAACAAAATGTTTGCAGGAGGGACTGAGTCCTGTTGGAT
GTAGGTGACTGGAAGATGTCCGACTTGGAGGCTTCGAATTCTTTTCAGAG
TACAAGCACCGCCCCATGAACTGAACGCTTTGTCCATGGAATACAATCGA
GTCCACTGGAAGTGTAAAGACAAATGACTATTCCGTGTACGGGTACCTCA
AAATCTAGACGCCGGCGCTTGAGTTCAGATATGCTCGTTGTGCCATCTGA
TTGGTCACTTGGGTGATATCACCAACTTGTTTGAAAATGTTTTTCGAACC
GATTTAATTTGATATTTGGTCGTTTTACTACCTCTATCAGTGCATATATA
CATATGTATTCATTTTTGTTTTACATTACACTCGATCCGTTTTTCTCACC
GTACCCGTGGCAAGATATGCTGCGAACATGCTTTCCCTATTAAACTAAAC
GAATTGTGTTGCTCCCAAACCGTGTATGACCAATCTCCCGTTCCCATCCT
TCCCGCTGCCACGCCACACAGACCCCTTCGCGTCTTTCCAGCCAGTCTCA
GGAGCTCCCGCGCCCGACGTGCAGGCCCCTATAGCACCCGGTGCTCCGGC
GCCGGTGCACGTGTCCTCTTTCGCGGCGTTCGGGGAGAGCCAATCCTCCA
ACGCTTCGTCTGCGACGTCTTCGACTGCGCCCAACCGACAACCGGCATCT
GACTTTGCCACTTGGATGTCGTCGGTGAGAGGGTCGTTGCCGACCACCGA
CCCTTTCGCTGCCGCACAGCAGACCGTAGCCGCAAACGGCACCGTCGGAG
GCGGGGGTGGAGGAATAGGGCTTGGCGGCAGCGGGGCGGCGGCGGCATCA
GGGGTCAGACAGATGCGGTTTGAAACGAGCGAATCGACGTCCTTCCATTC
CAGTAACGGGGGCTTTATCGCGAGCCCAAACCTGGGGCCAATTGCCGAAA
CATCGCCGGCGACCGATGGTAACCCCTTTGAAATCCCGTTGCCCCCCGCC
CCCGGAGCAGCCAGAAACGGCGGCGCTAGTCCTGGAGTCTTGAACGGGGC
CACGGTAAACCGGACAATCGATGTGTCGGATCCATTCTCTCTCGTCACTG
CCAATTCTTTCGCGACACCAAGAGGATCCGTGGATGGCGGCGGCGGGGGC
GGCCGCATCAGCAGAGGGTTTCCGCAAGTGTCGCAGGCGTTGGTGCCGAT
TAGTTCGGGCGCGCAGTCATCGGTGTCTACCTCTTCATCGTCTTCGCTCA
CGGCATTCCCTTCGGCAAACCAGGCCCTGCCTCAGCAACAAGCGCAACCA
CCACAACGTCATAGTCAGCAGCAGCAACAGCAGCAGCAGCAGTGGTGGCA
GCCGTCACCGCAACGACAGCAGCATAAACCGCAACCGCAACCGCTACATC
GGCAGTCTCAGCCACCGGTGAATAGGCACTCTCAACAGAGCTTCGCCGCC
GCCAACGAGCCGTTCGCCGGGGCCATCCTGCCCGCAGGCAGCACCAACTT
CGGCTCGGTGACGGACAACGACCCATACACTCAACCCCAGACTCAATCCC
GAGTCTCCACCTCTTCGAGAGTCGCGTCCTTCGGCGCCAGTGGGGCCGGA
GCGGCCGCGGGGTCAGGAAGCTTCGAATCTGGCACCGGCCACTACCCGCG
GAATTCCTTTGATTCGGTGTCGTCTTTGGTTCAGGGATCCGTTTTTGCTT
CCGGTGGTGGCGGCGGTGGGATGTTGGGCTCACAACAGACTTCTGGAGGT
GGCGGTGGCACGGGAGGGGAAACGCCGAGGAAATTCAATCCTTTTGATGA
CCCTGCTGCAGGGGCGGCACCGGGATACAGCACGCCGCAGCAAGCGCCGT
TGCTACAACAGCGGCCGCGGCGGCAGCAGCAGCAACAACCACAACAGTCG
TGGGCGCAACAACAGCATTTCCCACAGCGAACATCCTTCCAGCCGGCCGG
GCAGCAGGCGCAGTTTCAGCATTACGGCAGCGGAGTGAAAGGACGGGGAC
ATGGGCAACGAGGTAGTCTGCAGCAGCAGCTCTCGGCTCAACAGCAACCA
TCACCGTCCGCACAACAACAACAACCTCCTCAGCAGAACTACCTTGTTTG
ATCTAGAAGTGTTGTCGATGTCATAGCTACGCGTTTGGTTGGGAAGAAGG
GAAGGGGGGTGGGGT back to topCoding sequence (CDS) from alignment at H-paniculata_contig1891:8354..12418- >mRNA_H-paniculata_contig1891.4724.1 ID=mRNA_H-paniculata_contig1891.4724.1|Name=mRNA_H-paniculata_contig1891.4724.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3576bp|location=Sequence derived from alignment at H-paniculata_contig1891:8354..12418- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGGGCCGCGGACCAAGGCATACTGGTTCCATACACCGGTGGCGGCGG
GGGTGGGGTGGAGGGATTCGGCAGCGAAACTACCACCAGTAATTTCCCGA
GCGGGACCACTGCCAGTAACGTTCCCAGTGAGACGGGAGCGGTTTTCGGG
AGCAACAACGTCGGCAGCAGCTACGGGGGTAGCAATTATGGAGGAGCGCA
ACATCATGATGGGGGCCGCGGACCAAGGCATACTGGTTCCATACACCGGT
GGCGGCGGGGGTGGGGTGGAGGGATTCGGCAGCGAAACTACCACCAGTAA
TTTCCCGAGCGGGACCACTGCCAGTAACGTTCCCAGTGAGACGGGAGCGG
TTTTCGGGAGCAACAACGTCGGCAGCAGCTACGGGGGTAGCAATTATGGA
GGAGCGCAACATCATGACCCCTTCGCGTCTTTCCAGCCAGTCTCAGGAGC
TCCCGCGCCCGACGTGCAGGCCCCTATAGCACCCGGTGCTCCGGCGCCGG
TGCACGTGTCCTCTTTCGCGGCGTTCGGGGAGAGCCAATCCTCCAACGCT
TCGTCTGCGACGTCTTCGACTGCGCCCAACCGACAACCGGCATCTGACTT
TGCCACTTGGATGTCGTCGGTGAGAGGGTCGTTGCCGACCACCGACCCTT
TCGCTGCCGCACAGCAGACCGTAGCCGCAAACGGCACCGTCGGAGGCGGG
GGTGGAGGAATAGGGCTTGGCGGCAGCGGGGCGGCGGCGGCATCAGGGGT
CAGACAGATGCGGTTTGAAACGAGCGAATCGACGTCCTTCCATTCCAGTA
ACGGGGGCTTTATCGCGAGCCCAAACCTGGGGCCAATTGCCGAAACATCG
CCGGCGACCGATGGTAACCCCTTTGAAATCCCGTTGCCCCCCGCCCCCGG
AGCAGCCAGAAACGGCGGCGCTAGTCCTGGAGTCTTGAACGGGGCCACGG
TAAACCGGACAATCGATGTGTCGGATCCATTCTCTCTCGTCACTGCCAAT
TCTTTCGCGACACCAAGAGGATCCGTGGATGGCGGCGGCGGGGGCGGCCG
CATCAGCAGAGGGTTTCCGCAAGTGTCGCAGGCGTTGGTGCCGATTAGTT
CGGGCGCGCAGTCATCGGTGTCTACCTCTTCATCGTCTTCGCTCACGGCA
TTCCCTTCGGCAAACCAGGCCCTGCCTCAGCAACAAGCGCAACCACCACA
ACGTCATAGTCAGCAGCAGCAACAGCAGCAGCAGCAGTGGTGGCAGCCGT
CACCGCAACGACAGCAGCATAAACCGCAACCGCAACCGCTACATCGGCAG
TCTCAGCCACCGGTGAATAGGCACTCTCAACAGAGCTTCGCCGCCGCCAA
CGAGCCGTTCGCCGGGGCCATCCTGCCCGCAGGCAGCACCAACTTCGGCT
CGGTGACGGACAACGACCCATACACTCAACCCCAGACTCAATCCCGAGTC
TCCACCTCTTCGAGAGTCGCGTCCTTCGGCGCCAGTGGGGCCGGAGCGGC
CGCGGGGTCAGGAAGCTTCGAATCTGGCACCGGCCACTACCCGCGGAATT
CCTTTGATTCGGTGTCGTCTTTGGTTCAGGGATCCGTTTTTGCTTCCGGT
GGTGGCGGCGGTGGGATGTTGGGCTCACAACAGACTTCTGGAGGTGGCGG
TGGCACGGGAGGGGAAACGCCGAGGAAATTCAATCCTTTTGATGACCCTG
CTGCAGGGGCGGCACCGGGATACAGCACGCCGCAGCAAGCGCCGTTGCTA
CAACAGCGGCCGCGGCGGCAGCAGCAGCAACAACCACAACAGTCGTGGGC
GCAACAACAGCATTTCCCACAGCGAACATCCTTCCAGCCGGCCGGGCAGC
AGGCGCAGTTTCAGCATTACGGCAGCGGAGTGAAAGGACGGGGACATGGG
CAACGAGGTAGTCTGCAGCAGCAGCTCTCGGCTCAACAGCAACCATCACC
GTCCGCACAACAACAACAACCTCCTCAGCAGAACTACCTTGTTTGAACCC
CTTCGCGTCTTTCCAGCCAGTCTCAGGAGCTCCCGCGCCCGACGTGCAGG
CCCCTATAGCACCCGGTGCTCCGGCGCCGGTGCACGTGTCCTCTTTCGCG
GCGTTCGGGGAGAGCCAATCCTCCAACGCTTCGTCTGCGACGTCTTCGAC
TGCGCCCAACCGACAACCGGCATCTGACTTTGCCACTTGGATGTCGTCGG
TGAGAGGGTCGTTGCCGACCACCGACCCTTTCGCTGCCGCACAGCAGACC
GTAGCCGCAAACGGCACCGTCGGAGGCGGGGGTGGAGGAATAGGGCTTGG
CGGCAGCGGGGCGGCGGCGGCATCAGGGGTCAGACAGATGCGGTTTGAAA
CGAGCGAATCGACGTCCTTCCATTCCAGTAACGGGGGCTTTATCGCGAGC
CCAAACCTGGGGCCAATTGCCGAAACATCGCCGGCGACCGATGGTAACCC
CTTTGAAATCCCGTTGCCCCCCGCCCCCGGAGCAGCCAGAAACGGCGGCG
CTAGTCCTGGAGTCTTGAACGGGGCCACGGTAAACCGGACAATCGATGTG
TCGGATCCATTCTCTCTCGTCACTGCCAATTCTTTCGCGACACCAAGAGG
ATCCGTGGATGGCGGCGGCGGGGGCGGCCGCATCAGCAGAGGGTTTCCGC
AAGTGTCGCAGGCGTTGGTGCCGATTAGTTCGGGCGCGCAGTCATCGGTG
TCTACCTCTTCATCGTCTTCGCTCACGGCATTCCCTTCGGCAAACCAGGC
CCTGCCTCAGCAACAAGCGCAACCACCACAACGTCATAGTCAGCAGCAGC
AACAGCAGCAGCAGCAGTGGTGGCAGCCGTCACCGCAACGACAGCAGCAT
AAACCGCAACCGCAACCGCTACATCGGCAGTCTCAGCCACCGGTGAATAG
GCACTCTCAACAGAGCTTCGCCGCCGCCAACGAGCCGTTCGCCGGGGCCA
TCCTGCCCGCAGGCAGCACCAACTTCGGCTCGGTGACGGACAACGACCCA
TACACTCAACCCCAGACTCAATCCCGAGTCTCCACCTCTTCGAGAGTCGC
GTCCTTCGGCGCCAGTGGGGCCGGAGCGGCCGCGGGGTCAGGAAGCTTCG
AATCTGGCACCGGCCACTACCCGCGGAATTCCTTTGATTCGGTGTCGTCT
TTGGTTCAGGGATCCGTTTTTGCTTCCGGTGGTGGCGGCGGTGGGATGTT
GGGCTCACAACAGACTTCTGGAGGTGGCGGTGGCACGGGAGGGGAAACGC
CGAGGAAATTCAATCCTTTTGATGACCCTGCTGCAGGGGCGGCACCGGGA
TACAGCACGCCGCAGCAAGCGCCGTTGCTACAACAGCGGCCGCGGCGGCA
GCAGCAGCAACAACCACAACAGTCGTGGGCGCAACAACAGCATTTCCCAC
AGCGAACATCCTTCCAGCCGGCCGGGCAGCAGGCGCAGTTTCAGCATTAC
GGCAGCGGAGTGAAAGGACGGGGACATGGGCAACGAGGTAGTCTGCAGCA
GCAGCTCTCGGCTCAACAGCAACCATCACCGTCCGCACAACAACAACAAC
CTCCTCAGCAGAACTACCTTGTTTGA back to top
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