mRNA_H-paniculata_contig18880.4711.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig18880.4711.1
Unique NamemRNA_H-paniculata_contig18880.4711.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig18880.4711.1 vs. uniprot
Match: D8LNN4_ECTSI (Aa_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNN4_ECTSI)

HSP 1 Score: 214 bits (546), Expect = 3.270e-56
Identity = 99/177 (55.93%), Postives = 134/177 (75.71%), Query Frame = 1 
Query:    7 QLPGLIGKMMLFLALFFVFFASLGYLAFGENTETFVTMNLPQGSPSGAVSIALYIVAIILTYPLQLFPAVNCIERYIFSGVGPKSIRRKWLKNGVRTSCVIFTAVVARYAGRSYDNFATVVGGVCAVPLALIYPAAFQLRLMGSKLSSARRAWTFSVLILGVFAATLCTWQSISTWK 537
            + PG++   MLFLA+ F  F  LGYLA+GE  ETFVTMN+P G P GA+S+ LY +AI+++YPLQLFPAV C+E ++F  +  +S+ RKWLKN +R + V+ TA  A + G S+DNFA +VGG CAVPLAL+YP+AFQL++MG  ++   RAW ++VL+LG F A LC+WQSI+TWK
Sbjct:  395 KFPGVVRVAMLFLAIVFCIFGCLGYLAYGEGIETFVTMNIPAGHPVGALSVGLYSIAIMMSYPLQLFPAVKCLEGHLFGALRQRSLLRKWLKNTLRAAVVLATAAFAMFVGPSFDNFAGLVGGFCAVPLALVYPSAFQLKMMGDSMTMRERAWAWTVLVLGTFGAVLCSWQSIATWK 571
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BLAST of mRNA_H-paniculata_contig18880.4711.1 vs. uniprot
Match: A0A662XM46_9STRA (Aa_trans domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XM46_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.570e-27
Identity = 73/179 (40.78%), Postives = 102/179 (56.98%), Query Frame = 1 
Query:    7 QLPGLIGKMMLFLALFFVFFASLGYLAFGENTETFVTMNLPQGSPSGA-VSIAL-YIVAIILTYPLQLFPAVNCIERYIFSGVGPKSIRRKWLKNGVRTSCVIFTAVVARYAGRSYDNFATVVGGVCAVPLALIYPAAFQLRLMGSKLSSARRAWTFSVLILGVFAATLCTWQSISTWK 537
            + P ++   M FL   F  FA L Y AFG+NT++ VT+NLP    SGA +++ L Y +A++ TYPL L+P V  +E Y+F     K   R W KNG R + V  TA++A +     DNF  ++GG C+VPLA IYP  F      S L    RA   +V+ LG+F     T+Q++STW 
Sbjct:  240 KFPRILSSTMWFLVALFSVFAGLVYAAFGQNTQSVVTLNLPSAKDSGATMAVQLTYSLALVFTYPLMLYPVVKILEGYLFPHRRQKGYWR-WQKNGFRFALVCLTALIAYFGKEELDNFVALIGGFCSVPLAFIYPCMFH-----SALVKEGRAVNNAVIALGLFTMIFATYQAVSTWN 412
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BLAST of mRNA_H-paniculata_contig18880.4711.1 vs. uniprot
Match: A0A421G7L0_9STRA (Aa_trans domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421G7L0_9STRA)

HSP 1 Score: 127 bits (320), Expect = 5.440e-27
Identity = 71/179 (39.66%), Postives = 96/179 (53.63%), Query Frame = 1 
Query:    7 QLPGLIGKMMLFLALFFVFFASLGYLAFGENTETFVTMNLPQGSPSGAVSIA--LYIVAIILTYPLQLFPAVNCIERYIFSGVGPKSIRRKWLKNGVRTSCVIFTAVVARYAGRSYDNFATVVGGVCAVPLALIYPAAFQLRLMGSKLSSARRAWTFSVLILGVFAATLCTWQSISTWK 537
            + P ++   M+FL   F  FA L Y AFGENT++ VT+NLP    SGA       Y +A++ TYPL L+P V  +E Y+F     K   R W KNG R + V  TA ++ Y     DNF  ++GG C+VPLA IYP  F      SK+     A    V+ +G F     T+Q+I+TW 
Sbjct:  383 KFPRILSTTMMFLVSLFCVFAGLVYAAFGENTQSVVTLNLPSAQDSGATMAVQITYSIALVFTYPLMLYPVVKILEGYMFPHRSQKGFWR-WEKNGFRFALVCLTAAISYYGKEELDNFVAIIGGFCSVPLAFIYPCLFH-----SKIVDDGHALNNIVIAIGAFTMIFATYQAIATWN 555
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BLAST of mRNA_H-paniculata_contig18880.4711.1 vs. uniprot
Match: A0A662XLC3_9STRA (Aa_trans domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XLC3_9STRA)

HSP 1 Score: 127 bits (320), Expect = 6.290e-27
Identity = 73/179 (40.78%), Postives = 104/179 (58.10%), Query Frame = 1 
Query:    7 QLPGLIGKMMLFLALFFVFFASLGYLAFGENTETFVTMNLPQGSPSGA-VSIAL-YIVAIILTYPLQLFPAVNCIERYIFSGVGPKSIRRKWLKNGVRTSCVIFTAVVARYAGRSYDNFATVVGGVCAVPLALIYPAAFQLRLMGSKLSSARRAWTFSVLILGVFAATLCTWQSISTWK 537
            + P ++   M FL + F  FA L Y AFG++T++ VT+NLP    SGA +++ L Y +A++ TYPL L+P V  +E Y+F     K   R W KNG R + V  TAV+A +     DNF  ++GG C+VPLA IYP  F      S L +  RA   +V+ LG+F     T+Q++STW 
Sbjct:  399 KFPRILSSTMWFLVVLFSVFAGLVYAAFGQDTQSVVTLNLPSAKDSGATMAVQLTYSLALVFTYPLMLYPVVKILEGYLFPHHRQKGYWR-WQKNGFRFALVCLTAVIAYFGKEELDNFVALIGGFCSVPLAFIYPCLFH-----STLVNEGRAINNAVIALGLFTMVFATYQAVSTWN 571
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BLAST of mRNA_H-paniculata_contig18880.4711.1 vs. uniprot
Match: K3X5P2_GLOUD (Aa_trans domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5P2_GLOUD)

HSP 1 Score: 127 bits (318), Expect = 1.040e-26
Identity = 74/184 (40.22%), Postives = 104/184 (56.52%), Query Frame = 1 
Query:    1 QAQLPGLIGKMMLFLALFFVFFASLGYLAFGENTETFVTMNLPQGSPSGAVSIA--LYIVAIILTYPLQLFPAVNCIERYIFSGVGPKSIRRK----WLKNGVRTSCVIFTAVVARYAGRSYDNFATVVGGVCAVPLALIYPAAFQLRLMGSKLSSARRAWTFSVLILGVFAATLCTWQSISTW 534
            Q + P +I   +LFL + F  FA + Y AFG++T++ VT+NLP  S SGA       Y +A++LTYPL L+P V  +E Y F    P+  R K    W KNG R + V  TA +A +     DNF  ++GG C+VPLA IYP  F      SKL +       +V+I+GVF     ++Q++STW
Sbjct:  388 QHKFPKIISLTILFLVVLFSLFAGVVYAAFGQDTQSVVTLNLPNASVSGATMTVQITYSLALVLTYPLMLYPVVKILETYFF----PQKRRVKGYWRWQKNGFRFALVCLTAAIAFFGKNQLDNFVALIGGFCSVPLAFIYPCVFH-----SKLVNNGHWLNMTVVIVGVFTMVFASYQALSTW 562
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BLAST of mRNA_H-paniculata_contig18880.4711.1 vs. uniprot
Match: A0A484ECQ3_BRELC (Aa_trans domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484ECQ3_BRELC)

HSP 1 Score: 126 bits (317), Expect = 1.280e-26
Identity = 74/179 (41.34%), Postives = 98/179 (54.75%), Query Frame = 1 
Query:    7 QLPGLIGKMMLFLALFFVFFASLGYLAFGENTETFVTMNLPQGSPSGAVSIA--LYIVAIILTYPLQLFPAVNCIERYIFSGVGPKSIRRKWLKNGVRTSCVIFTAVVARYAGRSYDNFATVVGGVCAVPLALIYPAAFQLRLMGSKLSSARRAWTFSVLILGVFAATLCTWQSISTWK 537
            + P ++   MLFL   F  FA L Y AFG+NT++ VT+NLP    S A       Y +A++ TYPL L+P V  +E Y F     K   R W KNG R + V  TAV+A Y     DNF  ++GG C+VPLA IYP  F      SKL +  R    +V+ +G+F     T+Q+ STWK
Sbjct:  382 KFPRILSFTMLFLVTLFSVFAGLVYAAFGQNTQSVVTLNLPSAQVSIATMTVQITYSLALVFTYPLMLYPVVKILEGYFFPEFRRKGYWR-WEKNGFRFALVCLTAVIAYYGKDELDNFVALIGGFCSVPLAFIYPCLFH-----SKLLNQGRFLNNTVIAIGIFTMVFATYQAASTWK 554
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BLAST of mRNA_H-paniculata_contig18880.4711.1 vs. uniprot
Match: A0A2P4Y026_9STRA (Vacuolar amino acid transporter (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y026_9STRA)

HSP 1 Score: 122 bits (307), Expect = 3.000e-26
Identity = 72/179 (40.22%), Postives = 98/179 (54.75%), Query Frame = 1 
Query:    7 QLPGLIGKMMLFLALFFVFFASLGYLAFGENTETFVTMNLPQGSPSGA-VSIAL-YIVAIILTYPLQLFPAVNCIERYIFSGVGPKSIRRKWLKNGVRTSCVIFTAVVARYAGRSYDNFATVVGGVCAVPLALIYPAAFQLRLMGSKLSSARRAWTFSVLILGVFAATLCTWQSISTWK 537
            + P ++   MLFL      FA L Y AFG+ T++ VT+NLP    S A +S+ L Y +A++ TYPL L+P V  +E Y+F     K   R W KNG R + V  TA +A +     DNF  ++GG C+VPLA IYP  F      SKL    R     V+ LG+F     T+Q++STW 
Sbjct:  220 KFPRILSSTMLFLVTLLSVFAGLVYAAFGQETQSVVTLNLPSAQDSIATMSVQLTYSLALVFTYPLMLYPVVKILEGYLFPHHSQKGYWR-WEKNGFRFALVCLTAAIAYFGKEELDNFVALIGGFCSVPLAFIYPCLFH-----SKLVDEGRTLNNIVIALGIFTMIFATYQAVSTWN 392
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BLAST of mRNA_H-paniculata_contig18880.4711.1 vs. uniprot
Match: A0A3M6VUN4_9STRA (Aa_trans domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VUN4_9STRA)

HSP 1 Score: 125 bits (313), Expect = 4.100e-26
Identity = 74/179 (41.34%), Postives = 98/179 (54.75%), Query Frame = 1 
Query:    7 QLPGLIGKMMLFLALFFVFFASLGYLAFGENTETFVTMNLPQGSPSGAVSIA--LYIVAIILTYPLQLFPAVNCIERYIFSGVGPKSIRRKWLKNGVRTSCVIFTAVVARYAGRSYDNFATVVGGVCAVPLALIYPAAFQLRLMGSKLSSARRAWTFSVLILGVFAATLCTWQSISTWK 537
            + P ++   MLFL   F  FA L Y AFG++T++ VT+NLP    S A       Y +A++LTYPL L+P V  +E Y+FS    K   R W KNG R + V FTA +A +     DNF  ++GG C+VPLA IYP  F      SKL    R     V+ +GVF     T Q++STW 
Sbjct:  383 KFPRILSYTMLFLVTLFSVFAGLVYAAFGQDTQSVVTLNLPSAQDSIATMTVQITYSLALVLTYPLMLYPVVKILEGYLFSHHSQKGYWR-WEKNGFRFALVCFTAAIAYFGKEELDNFVALIGGFCSVPLAFIYPCLFH-----SKLLDEGRTLDNIVIGIGVFTMIFATSQALSTWN 555
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BLAST of mRNA_H-paniculata_contig18880.4711.1 vs. uniprot
Match: A0A7S2V642_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V642_9STRA)

HSP 1 Score: 124 bits (310), Expect = 5.130e-26
Identity = 65/177 (36.72%), Postives = 106/177 (59.89%), Query Frame = 1 
Query:    1 QAQLPGLIGKMMLFLALFFVFFASLGYLAFGENTETFVTMNLPQGSPSGAVSIALYIVAIILTYPLQLFPAVNCIERYIFSGVGPKSIRRKWLKNGVRTSCVIFTAVVARYAGRSYDNFATVVGGVCAVPLALIYPAAFQLRLMGSKLSSARRAWTFSVLILGVFAATLCTWQSIST 531
            + Q P ++  +M  LA+FF+ F++ GYLAFG NT+TFVT+N+P+    G     +Y +A++ TYPL LFPAV  +ER +   + P  + ++W  + +R   V  T +V+  AG+ YD F  ++G +CA PLAL+YP    +R+  S +S   +A     L +G+    +CT+ ++ T
Sbjct:  317 KEQYPKVLVSVMTGLAIFFLLFSAGGYLAFGANTQTFVTLNVPETCWIGVAVKLMYCLAVVFTYPLMLFPAVQVLERLLMPKL-PTGVLQRWAFSSLRVVTVFVTLIVSIAAGQCYDKFMALIGALCACPLALVYPPLIYIRIHWSNMSYIAKAREVLNLSVGMMFLIVCTYTTLMT 492
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BLAST of mRNA_H-paniculata_contig18880.4711.1 vs. uniprot
Match: A0A6H5JD21_9PHAE (Aa_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD21_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 5.640e-26
Identity = 69/176 (39.20%), Postives = 106/176 (60.23%), Query Frame = 1 
Query:    7 QLPGLIGKMMLFLALFFVFFASLGYLAFGENTETFVTMNLPQGSPSGAVSIALYIVAIILTYPLQLFPAVNCIERYIFSGVGPKSIR-------RKWLKNGVRTSCVIFTAVVARYAGRSYDNFATVVGGVCAVPLALIYPAAFQLRLMGSKLSSARRAWTFSVLILGVFAATLCT 513
            +LP  +   M+ +  FFV F + GYL + +   +F+TM+LPQ + +  +   +Y V +ILT PLQLFPA+  +ER +F  V P+  +       RKWLKN +R+  V+FT +VA  AG  +D+F  +VGG+C+VPLAL+YP  F + L G   S  ++A  + +L+ GV +    T
Sbjct:  273 RLPAALCWTMVGITTFFVIFGAAGYLTYEQEVASFITMDLPQDTVAATIVRVMYSVGLILTSPLQLFPAIKVLER-LFWPVVPRGSKKDMLDRTRKWLKNLLRSVVVVFTVLVALVAGSRFDSFTGIVGGLCSVPLALVYPMLFHMSLFGELDSPRKQAMHWVLLVGGVLSGVAST 447
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18880.4711.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNN4_ECTSI3.270e-5655.93Aa_trans domain-containing protein n=2 Tax=Ectocar... [more]
A0A662XM46_9STRA1.570e-2740.78Aa_trans domain-containing protein (Fragment) n=1 ... [more]
A0A421G7L0_9STRA5.440e-2739.66Aa_trans domain-containing protein n=4 Tax=Phytoph... [more]
A0A662XLC3_9STRA6.290e-2740.78Aa_trans domain-containing protein n=1 Tax=Nothoph... [more]
K3X5P2_GLOUD1.040e-2640.22Aa_trans domain-containing protein n=1 Tax=Globisp... [more]
A0A484ECQ3_BRELC1.280e-2641.34Aa_trans domain-containing protein n=1 Tax=Bremia ... [more]
A0A2P4Y026_9STRA3.000e-2640.22Vacuolar amino acid transporter (Fragment) n=1 Tax... [more]
A0A3M6VUN4_9STRA4.100e-2641.34Aa_trans domain-containing protein n=1 Tax=Peronos... [more]
A0A7S2V642_9STRA5.130e-2636.72Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6H5JD21_9PHAE5.640e-2639.20Aa_trans domain-containing protein n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18880contigH-paniculata_contig18880:146..5068 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score208.4
Seed ortholog evalue2.7e-51
Seed eggNOG ortholog2880.D8LNN4
Preferred nameAVT4
KEGG koko:K14209
KEGG TC2.A.18.8
KEGG Pathwayko04138,map04138
Hectar predicted targeting categorysignal peptide
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003333,GO:0003674,GO:0005215,GO:0005290,GO:0005302,GO:0005342,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0006868,GO:0007034,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015173,GO:0015174,GO:0015175,GO:0015179,GO:0015181,GO:0015186,GO:0015188,GO:0015189,GO:0015238,GO:0015318,GO:0015658,GO:0015711,GO:0015801,GO:0015802,GO:0015803,GO:0015804,GO:0015807,GO:0015809,GO:0015817,GO:0015824,GO:0015828,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031090,GO:0031224,GO:0032974,GO:0034220,GO:0034486,GO:0042221,GO:0042493,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044232,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045117,GO:0046618,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0061459,GO:0071702,GO:0071705,GO:0089707,GO:0089708,GO:0089709,GO:0098588,GO:0098655,GO:0098656,GO:0098805,GO:0098852,GO:1901474,GO:1902022,GO:1902023,GO:1902024,GO:1902475,GO:1903400,GO:1903401,GO:1903825,GO:1903826,GO:1905039,GO:1990816,GO:1990818,GO:1990822,GO:1990961
EggNOG free text desc.amino acid transmembrane transporter activity
EggNOG OGsCOG0814@1,KOG1304@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000,ko04131
Exons4
Model size2926
Cds size510
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18880.4711.1prot_H-paniculata_contig18880.4711.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig18880 176..2682 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929451.357582-UTR-H-paniculata_contig18880:145..1751622929451.357582-UTR-H-paniculata_contig18880:145..175Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig18880 146..175 +
1691480867.160157-UTR-H-paniculata_contig18880:145..1751691480867.160157-UTR-H-paniculata_contig18880:145..175Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig18880 146..175 +
1622929451.4349935-UTR-H-paniculata_contig18880:2682..50681622929451.4349935-UTR-H-paniculata_contig18880:2682..5068Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig18880 2683..5068 +
1691480867.2032025-UTR-H-paniculata_contig18880:2682..50681691480867.2032025-UTR-H-paniculata_contig18880:2682..5068Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig18880 2683..5068 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929451.3746035-CDS-H-paniculata_contig18880:175..2501622929451.3746035-CDS-H-paniculata_contig18880:175..250Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18880 176..250 +
1691480867.172399-CDS-H-paniculata_contig18880:175..2501691480867.172399-CDS-H-paniculata_contig18880:175..250Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18880 176..250 +
1622929451.3939545-CDS-H-paniculata_contig18880:1425..15501622929451.3939545-CDS-H-paniculata_contig18880:1425..1550Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18880 1426..1550 +
1691480867.1800919-CDS-H-paniculata_contig18880:1425..15501691480867.1800919-CDS-H-paniculata_contig18880:1425..1550Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18880 1426..1550 +
1622929451.4100342-CDS-H-paniculata_contig18880:2049..21631622929451.4100342-CDS-H-paniculata_contig18880:2049..2163Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18880 2050..2163 +
1691480867.1878397-CDS-H-paniculata_contig18880:2049..21631691480867.1878397-CDS-H-paniculata_contig18880:2049..2163Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18880 2050..2163 +
1622929451.4229577-CDS-H-paniculata_contig18880:2486..26821622929451.4229577-CDS-H-paniculata_contig18880:2486..2682Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18880 2487..2682 +
1691480867.1956227-CDS-H-paniculata_contig18880:2486..26821691480867.1956227-CDS-H-paniculata_contig18880:2486..2682Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18880 2487..2682 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig18880.4711.1

>prot_H-paniculata_contig18880.4711.1 ID=prot_H-paniculata_contig18880.4711.1|Name=mRNA_H-paniculata_contig18880.4711.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=170bp
MMLFLALFFVFFASLGYLAFGENTETFVTMNLPQGSPSGAVSIALYIVAI
ILTYPLQLFPAVNCIERYIFSGVGPKSIRRKWLKNGVRTSCVIFTAVVAR
YAGRSYDNFATVVGGVCAVPLALIYPAAFQLRLMGSKLSSARRAWTFSVL
ILGVFAATLCTWQSISTWK*
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mRNA from alignment at H-paniculata_contig18880:146..5068+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig18880.4711.1 ID=mRNA_H-paniculata_contig18880.4711.1|Name=mRNA_H-paniculata_contig18880.4711.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4923bp|location=Sequence derived from alignment at H-paniculata_contig18880:146..5068+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGCACAATTACCAGGGTTGATTGGAAAAATGATGCTGTTCCTGGCGTT
ATTCTTCGTTTTTTTTGCCTCTCTGGGCTACTTGGCCTTCGGCGAGAACA
CAGAGGTAAGGGAACAACAAGAACGGCACATGTACATGCTGTTCATCTTG
CAGTGTTCGAAATATCGAGCGTCGAGCCGATGACAAGATCTTCTCGTCGT
TTTACTTTTTTACATGGGGGGGGGGGGTGGGGTGGATCTACAATGGTTGG
TGGAAATGGTGACTCCGAAGGGCCCTGAAGCAGATCGGTTTTTTTTCAAT
GTTAGATTTTTTTTTTTTTTTTTGATGAAATGGATTGATTTTATTTACGT
GAAAATTTTGAAGAGTTTGTCGGACGAAAATTAGAGCCGCGAGTTGCAAT
GCCCTTTGAATATTTTTGTTGTAGGGTTTAACGGCGTGCCCAAATTTTGT
GTTGTAGGCCTGTCGAGATTTTGAGACACTGTAATCATCCTCAGCATGAG
GTAACGGGGTGCTGTTACATTTGTTGGTGTGTTCGCAAAGGCGTCCGTGT
TACCAGTGCGACACGCGCTGTGGTGGCAAAGACATGGAATATTTCAGGCC
CTTGTTAATAAACATGAGTGAATAAGCATAAGCATGATGCTCTTGCACGC
ATGTTTTCATGTCTGATGTTTGATGTTTAGCGAGTAGACGTGTTGTACTT
ACTTGCCTGTTAAGCTTTTCCCTTATATCACCAACTGTAGTCTCTGCAGT
TCACAGTCCACACAAGATATCGTAGAGTACACCATATTTCACATGAGGAA
AAGGTTTTTAAATCGACTGATTTTCTCTAGAACGTTGTAATTTTTTATTT
TTTTTCTTGTGTTTTGTCTCTCTTGACACCACCAACAGCTGTGTTGTTAA
AGATGCCTCATCGATATCGGTCATGAGATACATGCTATCTCTTCCTACAG
CCGATGTTGGTAAGCTCTTGTTTCTGGAGAAGAATCAATGGTGTTGAAAA
ATATGTCATGGCTGATATACAAGGTGATATGCTCTGGAGCATGACAACTA
CGATACGCAGTTTTTGAATTCGAGAGCGATGCTTGCAAGGCTAGTCATCG
CCAAAAGGTGTACATGCAGTTTGATGACATAGACGTACTATTGGTACAGG
CAGCACTTTTCCCTCTCGGTTCACTTTTTTTTTTTTTTTTTCGTTCTCGT
TACCAATCGTGTCGATACTTGACTAATTAATTTATTTGCTGTGCTCGCTG
CTTGCTGCTGCTGGAATGTGTCACTTACAGACATTCGTGACCATGAACTT
GCCCCAGGGTAGTCCTTCGGGCGCTGTGTCGATTGCCCTCTACATCGTGG
CTATCATACTTACGTATCCTCTGCAGCTCTTTCCCGCCGTCAATTGCATA
GAAAGGTGAGTGATGCGATGCACCAGACTTTTTATAGATTGCAACAACAG
CCGGCCGTGGCGTGTATCGAACACTGTTAATGACGGATGCAGCTGTTGTT
GTTGTTGTCTCCGAGCTGTGTGTCGCCGTTGGTGGGAACATGGCATGTGC
GTATATCACGAATTCTATTTCATGTAAATACGCAGATACCTACACGGTTA
ATAACGCCATTTCGATCGTGTGCTGGATTCTTACGGCCTCCTAATGAAGT
GCATGCTCATCTGTGAACGTTACCATTCCCTGGGTTTTTTTCATATACAC
ACACCTGTGACAACGACAATGGCTAGAAAGCACCAGAGTGTACCACATGT
AGCATAAAGGGACTTTTTAAAGGAGCGATGGGGTTTTGCTGGCACCACGA
ACGAATATCATACGTAACAATTCCGCAATTTTCTCATTTTTCTGTCGGCT
GTACATGGCTGTATTGTGTCTGTTGTGTCATCCCTTATGATGATATGGGT
CCAGGTATATATTTAGTGGGGTCGGGCCCAAGAGTATTCGGAGGAAATGG
CTTAAGAACGGCGTGAGAACGTCGTGTGTGATATTCACTGCTGTCGTCGC
CAGATACGCGGGTCGAAGGTAAGGAAGCCGGTTTAGAATGCTGTGAGTCT
AGCAACGCAACCCTGCCAACGTTGTGCGTTGGAAGCTAGAGAGCACTCTT
TCGTTAGACTGAACGAAGCAGTCATTGTTGGCTGGACGGTTGGTTCTTGA
GACAACATGTTGTATTTTGTGTTCACTTGACTACTCGTTCACGTAAATGT
TGGAAATTTTATCTTTTCGAACTGGTATCTTGTTGGGCGCATGTTGGGTT
CCCTTTTGGCGATATTTTCTGCTGCTGCTTTTTTTTTATTATTATTTATT
ACACTCCACACATGATCGTACTTTTCGTGTGTTTGCGACAGCTACGACAA
CTTTGCCACAGTGGTCGGAGGCGTGTGTGCGGTCCCTTTGGCGCTCATAT
ACCCAGCGGCGTTTCAGCTCCGCCTTATGGGAAGCAAACTGTCATCGGCC
CGGCGTGCTTGGACATTTTCCGTTTTGATCCTGGGCGTGTTTGCTGCTAC
GCTATGCACTTGGCAGTCTATCAGCACGTGGAAGTGAAGTATGAATTCGA
CCGCGCAGAAGGTACTGTGTTCGTGTATATAGTACAGGTCTGCTATATAT
GATGTTCTCTCGAGACTCAGCCCCTCGAATGTGTACTGTGGTTTTTGCAT
AGAAAATTCGAATTTTCGCTTCATGAAAAAAAGATGATTTGCCTCGTGAG
AGCTCAAAACAGTGTTGGAAATTTTGGAATTGGAATTGGCATTCAAGACT
TGAGGGTTTTACAACCAAGCATGGCCATTATGATAGTGGTGATTTTGACG
AGAGGTACCCCTCGGGTTGACTGACGTTTTTTTCCCTGTCCCCCAACGTG
CCATGTATCGTAAATATTGTAAGTCCACATGCGCAGCGAGTAAAACGTGC
TAGAGTAGGACGCAAGCTTACAGTGGGAGTGTTGACGCGAGGTCCCTCGT
TGGATGGACGCGCTGTACGTGGTCGTGGGCTGGGGAAATATGCCTCAGAA
TTTTATTGAGCATTCAACGAGTAAGTGCAATAGTGCTATAGTCATGTCAG
ATCTTCTTGGTCCAGTTATGGCATGATTTCGAAGGTGCAATACACTCGCT
AAAATTTAGTGCGTTGTGTCCGATGGCGTCATGATTTCACTGCCAATAGC
GTTAAAAAAAATGTAGAGTGATTGTAGTGTGATTGGCTGCACCGGACAGG
GGATCAGACTCTTCTTCGTCGGATTTTAAAACGCGTAACGCGGTGCTATG
TGATGTGGATACGTGTGTGTTAAAAGGTCTAGATCGAAGCATCAAACCTT
AGTTAGGTGAGAGGTTTAGGTCACGACCAAGGGCTGGCTACGGTTAATAG
ATACACACAGCTGAGGCGCTTGGTCGTGGCCTAAGGAAAATTACGATTCA
GTCTCTCCAACATAGTTTTCCAGCCATGTTGGGTGATGACAGGAATACTG
GGGTAGGAGAGATAGCTAGAGGTTCGACTTGCTGCACAAGCATATCTCGT
GAGTTCACCGGGGTTTTTTTGGTGATAATTCAGAGATGACTTTTTTTGTT
TTTTGTATGAAGACGATCGTGTCGCAAGATGAAAAACGGAGGATGGATTC
TCGTGACAACGAATGTGTATTTTGTTGTGTGTTTCGTTGACGGTTAGAGC
TGATTGCTTTTTTAGGGGTGCTTTTCTAATAACTGAAGATATTGCTGCTA
CGGTAGTATTGTCCTCACTACAAGACAATACCTTCGGTCCATGGTGTATA
GTGGCTTTACCGTATACCTCCTCCGTTCATTAGTAAAGGAACTTCGATTT
GTGTGAGATATTAATGGTGTCCAACTTTTTGGTTTGTTTGAAGATTTGGA
AGTCTTGATGTTTTTTGGATTGGATCCCAATTTTTCACAGCAAACCGTAA
AGCCCACGGCGTGCGCGAGCGGCTAAAAAAGAAAAAAATGGCCCAAAAAT
CACCCCGAAAAAGTGCATTTTCAGGCACGGGTACTTTGGGTCGCAGGCAG
TTGAGCGGGGCCATACTTTGGGCCGCCTCGCAATCGGGTAATCAATGAAC
ATCGTGTTGTCGAGTGCAAGCGTATACCTTCTGCCGAGAGGCAGTTCCTT
GCCTCTGTGGCGTGGTGGGGTCGCCGGAGCGGGCTCCATGGTAGGGTTGT
GTGCTTGTGTGGCACCTCAGAAAATTGGCCGGGACTGTCAAAAATGGCTG
GAATATGGGTAATTTCGGCTCATTGGTTTGTTCCGAAATCTTTGAAATGA
TCGTTTATAGTCGTATTGAGTCGAATCTACGTAGAAATATCTTTCGATCG
ATACCATGATCTCCCATTGAATCGCCGTAGAACTGGAGATGTGACCTATC
ATGTCAAATTATGGCTTCATAGCCAGAATCAACGACCAGTAGTGCGTGAG
CGTGGTGGCGTGAAGTACAGTAACAGCACTTGGTGTTAAGAGATAGGGCT
TCACCAACCTATCTAGACAGTGTTCAGTAGCACGGTATTGCTGCAGGCAT
CACAGCAGTAGAAGCTGTTGAAAGTACAACTATCGATATCTGTACTGTAG
ACTAGTAGCAACGTCAGTCCCAGCAATAAAAGCGGGCCAGCTCGTCCCGG
TTCGACTAAAAATTCAAGTTCTCATAATTTTCTGGAGGCAGCACAGAGAG
GTGACGCTGGAGGTAACCCCGGGACATTGTATCGGGAAGTAGCAGCGGGG
GTTTAGCGGGGGGTTATTTCTTCCGCTTCCATGCAATTATCCGGATGCTT
GTCCTGGATCAATCGAGTGTGGCTTCCCCACCTCATCACAGTCTCACAAC
AGCCAACAAGATATCAGCTCTCAGCTGGTCTCTGTGGTTCTGTCTTCTTT
TTGTTTAAGTCCTAACTAATAAAAGGCAACTGTAGTTCAATATCTTCTGT
CTTAAGTGGTGCACACTGCATCC
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Coding sequence (CDS) from alignment at H-paniculata_contig18880:146..5068+

>mRNA_H-paniculata_contig18880.4711.1 ID=mRNA_H-paniculata_contig18880.4711.1|Name=mRNA_H-paniculata_contig18880.4711.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1020bp|location=Sequence derived from alignment at H-paniculata_contig18880:146..5068+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATGCTGTTCCTGGCGTTATTCTTCGTTTTTTTTGCCTCTCTGGGCTA
CTTGGCCTTCGGCGAGAACACAGAGATGATGCTGTTCCTGGCGTTATTCT
TCGTTTTTTTTGCCTCTCTGGGCTACTTGGCCTTCGGCGAGAACACAGAG
ACATTCGTGACCATGAACTTGCCCCAGGGTAGTCCTTCGGGCGCTGTGTC
GATTGCCCTCTACATCGTGGCTATCATACTTACGTATCCTCTGCAGCTCT
TTCCCGCCGTCAATTGCATAGAAAGACATTCGTGACCATGAACTTGCCCC
AGGGTAGTCCTTCGGGCGCTGTGTCGATTGCCCTCTACATCGTGGCTATC
ATACTTACGTATCCTCTGCAGCTCTTTCCCGCCGTCAATTGCATAGAAAG
GTATATATTTAGTGGGGTCGGGCCCAAGAGTATTCGGAGGAAATGGCTTA
AGAACGGCGTGAGAACGTCGTGTGTGATATTCACTGCTGTCGTCGCCAGA
TACGCGGGTCGAAGGTATATATTTAGTGGGGTCGGGCCCAAGAGTATTCG
GAGGAAATGGCTTAAGAACGGCGTGAGAACGTCGTGTGTGATATTCACTG
CTGTCGTCGCCAGATACGCGGGTCGAAGCTACGACAACTTTGCCACAGTG
GTCGGAGGCGTGTGTGCGGTCCCTTTGGCGCTCATATACCCAGCGGCGTT
TCAGCTCCGCCTTATGGGAAGCAAACTGTCATCGGCCCGGCGTGCTTGGA
CATTTTCCGTTTTGATCCTGGGCGTGTTTGCTGCTACGCTATGCACTTGG
CAGTCTATCAGCACGTGGAAGTGACTACGACAACTTTGCCACAGTGGTCG
GAGGCGTGTGTGCGGTCCCTTTGGCGCTCATATACCCAGCGGCGTTTCAG
CTCCGCCTTATGGGAAGCAAACTGTCATCGGCCCGGCGTGCTTGGACATT
TTCCGTTTTGATCCTGGGCGTGTTTGCTGCTACGCTATGCACTTGGCAGT
CTATCAGCACGTGGAAGTGA
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