mRNA_H-paniculata_contig188.4676.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig188.4676.1 vs. uniprot
Match: D7G911_ECTSI (LISK family protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G911_ECTSI) HSP 1 Score: 792 bits (2045), Expect = 3.010e-282 Identity = 411/532 (77.26%), Postives = 456/532 (85.71%), Query Frame = 1
Query: 1 VSSNGKMTICGTDEYMAPEMLFDESFSYPADMFSFGMVLLELITRKKIGENGFARRTPAKLFALEADEIKQEAPPDAPDSLLNLAAECMEYEADERPSAEETRAWLEELLTELPHDTCAIPEPPDIPTIPESEERNDNSDTPPASMSGPPSVLSQLHQTSISPLDDDQTRIHTGGPPRLRMTGRSETNSSLPSPPSMA--DDQSYFSSSHLPTMTEDGEATFVPQKMGYLHIKNQGLGFRNWKKRWFVLKGAELVCYKDGGLIETVGLRGCSIKRGKASRFQIIKVK-EKTESPEDKEGVEEMELAATNTNSLESWLTIIESAIQYADEQGVVASIYRAERPVSYGGGNGLSDSIMDWLLDLRLESLWPNFEKHGYTDLKKIKQQGLKNSDLEKLEVKNPIHRRFLLDVGRSPFRTGLKVSVVGHRSFGDIIMFKVVTEWRAWYSKTEKLYTDFNKLHNKLRRAFKETNSPLMEQLPLLPGKGQVVQDQKDPAFLLIRKTELEAYLREVAVLVESHEPFFTLLCEALDLFSA 1587
VSSNGKMTICGTDEYMAPEMLFDESFSYPADMFSFGMVLLELITRKKIGENGFARRTPAKLFALEA+E++QE+PPDAPDSLLNLAA CMEYEA+ERPSA+ETRAWLEELL+ELP+DTCAIPEP ++P IPE E+R D+++TPPAS S + L QT+ D D+ R+ G R G ++ NS LPSPP+M DDQS+FS+S LP++T DGEA FVP KMGYLHIKNQG+GFRNWKKRWFVL GAELVCY DGGLIETVGLRGC+IKRGKASRFQIIK +T EDKEG+EEMELAATN+NSLE+WL+ IES I YADEQG +S +A VS GG NG SDSIMDWLLDLRLE LWPNFE HGYTDLKKIKQQGLK SDLEKLE+KNP+ RRFL+DVGRSPFRT LKVS+VGHRSFGDI+MFKVVTEWRAWYSKTEKLYTDFNKLHNKLRRAF+ETNSPLME LP LPGKGQVVQDQK+ AFL RK +LEAYL+EVA LVE+ EPFF+LL ALDLFSA
Sbjct: 175 VSSNGKMTICGTDEYMAPEMLFDESFSYPADMFSFGMVLLELITRKKIGENGFARRTPAKLFALEAEEVRQESPPDAPDSLLNLAAMCMEYEAEERPSADETRAWLEELLSELPNDTCAIPEPLEVPAIPEGEDRIDSAETPPASAIIGKSDMDGLEQTANF-SDADKRRVQAGRD-RAHWAGDADANSGLPSPPAMGGGDDQSFFSASQLPSVTGDGEA-FVPSKMGYLHIKNQGIGFRNWKKRWFVLTGAELVCYMDGGLIETVGLRGCTIKRGKASRFQIIKTHVARTAVTEDKEGIEEMELAATNSNSLEAWLSTIESCIAYADEQGATSSDNQASPLVSIGG-NGNSDSIMDWLLDLRLEGLWPNFEAHGYTDLKKIKQQGLKASDLEKLEIKNPLQRRFLMDVGRSPFRTALKVSIVGHRSFGDIVMFKVVTEWRAWYSKTEKLYTDFNKLHNKLRRAFRETNSPLMEHLPPLPGKGQVVQDQKNSAFLAKRKVDLEAYLKEVAALVETQEPFFSLLASALDLFSA 702
BLAST of mRNA_H-paniculata_contig188.4676.1 vs. uniprot
Match: A0A6H5L3U3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3U3_9PHAE) HSP 1 Score: 520 bits (1338), Expect = 2.580e-178 Identity = 278/384 (72.40%), Postives = 314/384 (81.77%), Query Frame = 1
Query: 1 VSSNGKMTICGTDEYMAPEMLFDESFSYPADMFSFGMVLLELITRKKIGENGFARRTPAKLFALEADEIKQEAPPDAPDSLLNLAA---------ECMEYEADERPSAEETRAWLEELLTELPHDTCAIPEPPDIPTIPESEERNDNSDTPPASMSGPPSVLSQLHQTSISPLDDDQTRIHTGGPPRLRMTGRSETNSSLPSPPSMA--DDQSYFSSSHLPTMTEDGEATFVPQKMGYLHIKNQGLGFRNWKKRWFVLKGAELVCYKDGGLIETVGLRGCSIKRGKASRFQIIKVK-EKTESPEDKEGVEEMELAATNTNSLESWLTIIESAIQYADEQGVVASIYRAERPVSYGGGNGLSDSIMDWLLDLRLESLWPNFEKHG 1116
VSSNGKMTICGTDEYMAPEMLFDESFS+PADMFSFGMVLLELITRKKIGENGFARRTPAKLFALEA+E++QE+PPDAPDSLLNLAA CMEYEA+ERPSA+ETRAWLEELL+ELP+DTCAIPEP ++P IPE E+R D+++TPPAS S + L QT+ D D+TR+ G R G ++ NS LPSPP+M DDQS+FS+S LP++T DGEA FVP KMGYLHIKNQG+GFRNWKKRWFVL GAELVCY DGGLIETVGLRGC+IKRGKASRFQIIK +T EDKEG+EEMELAATN+NSLE+WL+ IES I YADEQG +S +A VS GG NG SDSIMDWLLDLRLE+LWPNFE HG
Sbjct: 104 VSSNGKMTICGTDEYMAPEMLFDESFSFPADMFSFGMVLLELITRKKIGENGFARRTPAKLFALEAEEVRQESPPDAPDSLLNLAAMWVPVSARTRCMEYEAEERPSADETRAWLEELLSELPNDTCAIPEPLEVPAIPEGEDRIDSAETPPASAIIGKSDIDGLEQTANF-SDADKTRVQAGRD-RAHWAGDADANSGLPSPPAMGGGDDQSFFSASQLPSVTGDGEA-FVPSKMGYLHIKNQGIGFRNWKKRWFVLTGAELVCYMDGGLIETVGLRGCTIKRGKASRFQIIKTHVARTAVTEDKEGIEEMELAATNSNSLEAWLSTIESCIAYADEQGATSSDNQASPLVSMGG-NGNSDSIMDWLLDLRLEALWPNFEAHG 483
BLAST of mRNA_H-paniculata_contig188.4676.1 vs. uniprot
Match: A0A835YUS4_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUS4_9STRA) HSP 1 Score: 464 bits (1194), Expect = 2.680e-150 Identity = 251/521 (48.18%), Postives = 334/521 (64.11%), Query Frame = 1
Query: 1 VSSNGKMTICGT----------------------DEYMAPEMLFDESFSYPADMFSFGMVLLELITRKKIGEN------------GFARRTPAKLFALEADEIKQEAPPDAPDSLLNLAAECMEYEADERPSAEETRAWLEELLTELPHDTCAIPEPPDIPTIPESEERNDNSDTPPASMSGPPSVLSQLHQTSISPLDDDQTRIHTGGPPRLRMTGRSETNSSLPSPPSMADDQSYFSSSHLPTMTEDGEATFVPQKMGYLHIKNQGLGFRNWKKRWFVLKGAELVCYKDGGLIETVGLRGCSIKRGKASRFQIIKVKEKTESPEDKEGVEEMELAATNTNSLESWLTIIESAIQYADEQGVVASIYRAERPVSYGGGNGLSDSIMDWLLDLRLESLWPNFEKHGYTDLKKIKQQGLKNSDLEKLEVKNPIHRRFLLDVGRSPFRTGLKVSVVGHRSFGDIIMFKVVTEWRAWYSKTEKLYTDFNKLHNKLRRAFKETNSPLMEQLPLLPGKGQVVQDQK 1461
V+ +GKMTICGT DEYMAPEMLFDE FS+PADM+SFGMVLLELITR+KIGE GFA+R P LF LE +++ P DAP SL+ L +C+EYEA+ RP+AE+ RAWLE+LL E+P DT +P P + + E+++ + + L+Q + +P ++ P T S+ S +P P ++ + S L ++ F+P KMGYLH+KNQGLGFRNWKKRWFVLKG EL+ YKDGG IE V LRGC++ RGK +RFQ++K+ E+ +S + G+EEMELAATN +SLE+WL+ I+S I YA+ QG + P N S+ +WL L++E LWP F+ G D+ +I +GL+ D++K+ +KNP+ RR+L +GRSPF+ L+VSVVGHRSFGD+++FKVVTEWRAWYSKTEKLYTDFNKLHN+LRR K+ +SPL+ LP LPGKG+VVQ+QK
Sbjct: 253 VAKDGKMTICGTLRLKVXXXXXXXXXXXXXXXXTDEYMAPEMLFDEDFSHPADMYSFGMVLLELITRRKIGEGRKVDREGAELEPGFAQRHPKNLFTLEEADVRAAIPADAPPSLVTLTLQCLEYEANLRPTAEDARAWLEDLLAEIPDDTAPLPSLPVVEGMLEADQEEETLEQ----------ALAQASLSGRAPRPPER--------PAATPTDASDYPSEMPPLPPQSNRGAQGLSPILGHDSQHNSQAFIPSKMGYLHVKNQGLGFRNWKKRWFVLKGGELIAYKDGGHIENVDLRGCTLVRGKTNRFQVVKLGEE-DSTHNLVGLEEMELAATNASSLEAWLSAIQSGIDYANGQGAEGTDPAVMSPPP---ANDQGVSMQEWLRCLKMEDLWPMFQAKGLVDMARISARGLRPDDMDKIGLKNPLRRRYLESLGRSPFKEFLQVSVVGHRSFGDVVVFKVVTEWRAWYSKTEKLYTDFNKLHNRLRRTLKDADSPLLNSLPELPGKGKVVQNQK 751
BLAST of mRNA_H-paniculata_contig188.4676.1 vs. uniprot
Match: A0A6H5JUU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUU0_9PHAE) HSP 1 Score: 164 bits (415), Expect = 2.000e-45 Identity = 76/87 (87.36%), Postives = 83/87 (95.40%), Query Frame = 1
Query: 1117 YTDLKKIKQQGLKNSDLEKLEVKNPIHRRFLLDVGRSPFRTGLKVSVVGHRSFGDIIMFKVVTEWRAWYSKTEKLYTDFNKLHNKLR 1377
YTDLKKIKQQGLK SDL+KL++KNP+ RRFL+DVGRSPFRT LKVS+VGHRSFGDI+MFKVV EWRAWYSKTEKLYTDFNKLHNKLR
Sbjct: 16 YTDLKKIKQQGLKTSDLDKLDIKNPLQRRFLMDVGRSPFRTALKVSIVGHRSFGDIVMFKVVAEWRAWYSKTEKLYTDFNKLHNKLR 102
BLAST of mRNA_H-paniculata_contig188.4676.1 vs. uniprot
Match: A0A6G0XNZ9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XNZ9_9STRA) HSP 1 Score: 133 bits (335), Expect = 8.250e-30 Identity = 106/412 (25.73%), Postives = 183/412 (44.42%), Query Frame = 1
Query: 16 KMTICGTDEYMAPEMLFDESFSYPADMFSFGMVLLELITRKKIGENGFARRTPAKLFALEADEIKQEAPPDAPDSLLNLAAECMEYEADERPSAEETRAWLEELLTELPHDTCAIPEPPDIPTIPESEERNDNSDTPPASMSGPPSVLSQLHQTSISPLDDDQTRIHTGGPPRLRMTGRSETNSSLPSPPSMADDQSYFSSSHLPTMTEDGEATFVPQKMGYLHIKNQGLGFRNWKKRWFVLKGAELVCYK-----------DGGLIE---TVGLRGCSIKRGKASRFQIIKVKEKTESPEDKEGVEEMELAATNTNSLESWLTIIESAIQYADEQGVVASIYRAERPVSYGGGNGLSDSIMDWLLDLRLESLWPNFEKHGYTDLKKIKQQGLKNSDLEKLEVKNPIHRRFL 1209
+M++CGTD YM+PEM F+E ++ AD+FS+G+VL+ELI R++ E+GF R P+K F ++ ++ + P P SL+ LA C +EA RPSA E WLE+L +L HD + ++ +D S +S SI D++ + G + +++S+F D E+ P G LH+ + + R W++RW V++ + L YK + G ++ + L GC IK+ K R+ ++ + + +E A N ++ W+ +++ AI+ AD + + V+ +D I WL L L + F+ G+ + +++ GL D L ++N R L
Sbjct: 207 RMSLCGTDAYMSPEMFFEEDYNESADIFSYGIVLMELICRRQANEDGFLMREPSKNFVVDMEQFRANVPRSCPLSLVLLAENCTSFEASGRPSAREIVEWLEDLKKDL-HD--------------DDQQSSDEGF----------SEMSMALTASIHEEDEETHDVAVG----------------------LQEEESHF----------DEES--APIYYGALHMPHGCM--RRWRQRWVVIRDSTLSIYKSQKEYQATTEGNNGRVKPPVSTALAGCVIKQKKNRRWMVVHADRQLK----------LEFQAANLQDMQLWIAMLDRAIKIADYLETRRDVEATPQVVA-----DPTDEIYKWLDSLGLARHYQTFKDKGFATIDFVRETGLGEDDFNFLGIENNKERDVL 542
BLAST of mRNA_H-paniculata_contig188.4676.1 vs. uniprot
Match: W4H9E5_9STRA (TKL/LISK/LISK-DD1 protein kinase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H9E5_9STRA) HSP 1 Score: 130 bits (327), Expect = 1.100e-28 Identity = 113/417 (27.10%), Postives = 179/417 (42.93%), Query Frame = 1
Query: 16 KMTICGTDEYMAPEMLFDESFSYPADMFSFGMVLLELITRKKIGENGFARRTPAKLFALEADEIKQEAPPDAPDSLLNLAAECMEYEADERPSAEETRAWLEELLTELP----HDTCAIPEPPDIPTIPESEERNDNSDTPPASMSGPPSVLSQLHQTSISPLDDDQTRIHTGGPPRLRMTGRSETNSSLPSPPSMADDQSYFSSSHLPTMTEDGEATFVPQKMGYLHIKNQGLGFRNWKKRWFVLKGAELVCYK---------DGGL--IETVGLRGCSIKRGKASRFQIIKVKEKTESPEDKEGVEEMELAATNTNSLESWLTIIESAIQYADEQGVVASIYRAERPVSYGGGN----GLSDSIMDWLLDLRLESLWPNFEKHGYTDLKKIKQQGLKNSDLEKLEVKNPIHRRFL 1209
+M++CGTD YM PEMLF+E ++ AD+FS+G+VL+EL+ R+ + E+GF +R PAK FA++ DE + P P SL+ LA C +E RP+A E WLE+L +L + + + + + E LS H + + DD+ H DD S+ S+ H E T P G L + + L R W+ RW VL+ + L +K D G ++ L GC +K+ A+R ++ G + A+ + L+ W+ ++ AI AD Y A + ++ G +D I WL L L + F+ G+ L +++ GL + D L V + HR+ L
Sbjct: 202 RMSLCGTDTYMPPEMLFEEDYNESADIFSYGIVLMELLCRRHVNEDGFLKRQPAKNFAIDMDEFRAGVRPTCPSSLVLLAENCTAFEPTNRPTAREVVEWLEDLQKDLDINQKQQQLMLRKASSVDSFYDDNESES---------------LSSAH---VDTVVDDRAGGH--------------------------DDGSWISTHHHEDELHFDE-TSAPAYAGPLLMAHGPL--RRWRHRWIVLQDSTLSIFKNLKHFQSMNDQGTPKLDATPLAGCRVKQKPANRRWTLE--------HAAVGGVKWTFRASTAHELQLWVAMLTRAIHVAD--------YLAGQELANGESPPPPVDPTDEIYTWLDSLDLACYFQTFKSKGFATLDYLRETGLGDDDFNFLNVHDASHRQRL 555
BLAST of mRNA_H-paniculata_contig188.4676.1 vs. uniprot
Match: A0A7S2ASQ0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ASQ0_9STRA) HSP 1 Score: 121 bits (304), Expect = 7.390e-27 Identity = 93/295 (31.53%), Postives = 139/295 (47.12%), Query Frame = 1
Query: 16 KMTICGTDEYMAPEMLFDESFSYPADMFSFGMVLLELITRKKIGENGFARRTPAKLFALEADEIKQEAPPDAPDSLLNLAAECMEYEADERPSAEETRAWLEELLTELPHDTCAIPEPPDIPTIPESEERNDNSDTPPASMSGPPSVLS----QLHQTSISPLDDDQTRIHTGGPPRLRMTGRSETNSSLPSPPSMADDQSYF-------------SSSHLP-----TMTED-GEATFVPQKM-GYLHIKNQGLGFRNWKKRWFVLKGAELVCYKDGGLI------ETVGLRGCS 810
+MT CGT YMAPE+ F E + AD +SFG+VL+E+ +R+++G++GFA+ +PA F L+ D ++ A D P S L L+ +C YE DERPS E+ W+E+LL EL D +P P G P +S Q S++ + DQT+ T P S L +++D+Q S P T+TE +P M G+LH K + RNWK R+F L G +L +++ L E++ +RGC+
Sbjct: 2 RMTTCGTGSYMAPEISFSEDYGVAADTYSFGLVLVEIWSRREVGKDGFAQTSPANCFKLDLDSLRAMASSDVPGSFLELSMQCCSYEKDERPSMEDALGWIEDLLNELHQDL--VPPP------------------------GSPREISVHAYQGRTMSVTNMSFDQTKKRTNEPQTQLEFFESVLAEGLARGVTISDEQRTTLCAIAKELAVEPSSGEEAPAQLCSTVTEKLAPVPSLPDSMIGWLHKKGRSWP-RNWKVRYFRLSGNQLDWWRNEPLSLDSLPDESMDIRGCT 269
BLAST of mRNA_H-paniculata_contig188.4676.1 vs. uniprot
Match: A0A485KH33_9STRA (Aste57867_5055 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KH33_9STRA) HSP 1 Score: 125 bits (314), Expect = 1.260e-26 Identity = 112/402 (27.86%), Postives = 169/402 (42.04%), Query Frame = 1
Query: 16 KMTICGTDEYMAPEMLFDESFSYPADMFSFGMVLLELITRKKIGENGFARRTPAKLFALEADEIKQEAPPDAPDSLLNLAAECMEYEADERPSAEETRAWLEELLTELPHDTCAIPEPPDIPTIPESEERNDNSDTPPASMSGPPSVLSQLHQTSISPLDDDQTRIHTGGPPRLRMTGRSETNSSLPSPPSMADDQSYFSSSHLPTMTEDGEATFVPQKMGYLHIKNQGLGF---------RNWKKRWFVLKGAELVCYKDGG----LIETVGLRGCSIKRGKASRFQIIKVKEKTESPEDKEGVEEMELAATNTNSLESWLTIIESAIQYADEQGVVASIYRAERPVSYGGGNGLSDSIMDWLLDLRLESLWPNFEKHGYTDLKKIKQQGLKNSDLEKLEV 1182
+M++CGTD YM PEMLF+E ++ D+FS+G+VL+ELI R+ I ENGF R PAK F ++ DE + P P SL+ LA C+ +E+ RPSA E WLE+L ++ DN D AS S L ++ T L DD TR PS D +SH D +A P+ G L + G R ++RW VL+ + L YK+ ET+ RG + + +++ K+ G + E AT T ++ W+ I+ A+ AD RP +D + WL D+ + + F+ G+ L +++ GL + D L +
Sbjct: 499 RMSLCGTDAYMPPEMLFEEDYNESIDIFSYGVVLIELICRQHINENGFLMRHPAKNFVIDMDEFRAAVPESCPPSLVLLAENCVSFESSGRPSAREVVEWLEDLKKDM----------------------QDNDDD--ASGSANNFAL-EMSTTLTDSLHDDDTR------------------------PSDVD------ASH------DMDADSAPRYAGSLLMTRPSGGIGDVQLLRCVRRSRQRWVVLQDSTLTIYKNQKECDLFRETLTPRGATKPLSTSLAGALLREKKNRRWFVVLPGNTKWEFQATTTQDMQFWVAILGRAVHVADHMDA------RRRPSEDMVLPDPADEVYRWLDDVGMAHHYHTFKSKGFATLDFLRETGLGDDDFNFLNI 833
BLAST of mRNA_H-paniculata_contig188.4676.1 vs. uniprot
Match: A0A7S2G8Z1_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G8Z1_9STRA) HSP 1 Score: 116 bits (291), Expect = 2.880e-24 Identity = 56/130 (43.08%), Postives = 79/130 (60.77%), Query Frame = 1
Query: 19 MTICGTDEYMAPEMLFDESFSYPADMFSFGMVLLELITRKKIGENGFARRTPAKLFALEADEIKQEA------------PPDAPDSLLNLAAECMEYEADERPSAEETRAWLEELLTELPHDTCAIPEPP 372
MTICGTDEYMAPE+LFDE + P D+++FGMVLLE++ R+++G NGFA R F L +E++ + P + P S++ LA +C+EYE + RPS + W+EE + EL D P P
Sbjct: 190 MTICGTDEYMAPELLFDEDYGRPVDVYAFGMVLLEVLARREVGHNGFAERPVQNNFRLNVEELRGNSLDEGADPHPGSLPKETPPSIVELAVQCLEYEPENRPSIADVVGWIEEFMGELVEDDIPPPNAP 319
BLAST of mRNA_H-paniculata_contig188.4676.1 vs. uniprot
Match: A0A1V9Z5G7_9STRA (Kinase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z5G7_9STRA) HSP 1 Score: 116 bits (290), Expect = 6.000e-24 Identity = 108/407 (26.54%), Postives = 182/407 (44.72%), Query Frame = 1
Query: 16 KMTICGTDEYMAPEMLFDESFSYPADMFSFGMVLLELITRKKIGENGFARRTPAKLFALEADEIKQEAPPDAPDSLLNLAAECMEYEADERPSAEETRAWLEELLTELPHDTCAIPEPPDIPTIPESEERNDNSDTPPASMSGPPSVLSQLHQTSISP---LDDDQTRIHTGGPPRLRMTGRSETNSSLPSPPSMADDQSYFSSSHLPTMTEDGEATFVPQKMGYLHIKNQGLGFRNWKKRWFVLKGAELVCYKDGGLIETVGLRGCSIK-----RGKASRFQIIKVKEKTESPEDKEGVEEMELAATNTNSLESWLTIIESAIQYADEQGVVASIYRAERPVSYGGGN-GLSDSIMDWLLDLRLESLWPNFEKHGYTDLKKIKQQGLKNSDLEKLEVKNPIHRRFL 1209
KM++CGTD YM+PEM F+E ++ AD++SFG+VL+ELI R+++ +N F R PAK F ++ +E P P SL+ LA C +E + RPS++E WLE+L E+ + PE +PT E R D+ P +H T LD+ + G GR + + D + SH + E+ A ++ G+ IK+Q + ++ ++ ++ V + G I RG + + +K KT + + A +T ++ W+ + AI+ +AS+ + ++PV N SD I WL L L+ + F++ G++ L +++ GL D L ++N R L
Sbjct: 186 KMSLCGTDAYMSPEMYFNEDYNDRADIYSFGVVLIELICRREVNKNDFLMRVPAKNFVIDPEEFHANVPAGCPPSLVLLADNCTSFEPEGRPSSQEVVEWLEDLRNEMQDAKDSSPEDSFVPT---EEGRTTMDDSLP------------IHHTEDEETHILDEVDPPTYQGELLLRNCVGRWRQRWIV-----VKDSKLIVYKSHA--LYEEISAL---EREGHQKIKHQPTP----------IPLSQCQLFQVNPPVKDVSVFGLKIDLPTFMRGLKKKARRWTIKAKTLNSK-------WAFQAASTQEMQLWVALFMRAIK-------IASLTQQQQPVPRQLENIDTSDEIYKWLNSLGLKQYFSTFKEKGFSTLDFVRETGLAEDDFNFLGIENADDRAIL 543 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig188.4676.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig188.4676.1 >prot_H-paniculata_contig188.4676.1 ID=prot_H-paniculata_contig188.4676.1|Name=mRNA_H-paniculata_contig188.4676.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=529bp MTICGTDEYMAPEMLFDESFSYPADMFSFGMVLLELITRKKIGENGFARRback to top mRNA from alignment at H-paniculata_contig188:40630..45858+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig188.4676.1 ID=mRNA_H-paniculata_contig188.4676.1|Name=mRNA_H-paniculata_contig188.4676.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5229bp|location=Sequence derived from alignment at H-paniculata_contig188:40630..45858+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig188:40630..45858+ >mRNA_H-paniculata_contig188.4676.1 ID=mRNA_H-paniculata_contig188.4676.1|Name=mRNA_H-paniculata_contig188.4676.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3174bp|location=Sequence derived from alignment at H-paniculata_contig188:40630..45858+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |