mRNA_H-paniculata_contig1849.4553.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1849.4553.1 vs. uniprot
Match: A0A6H5KPS4_9PHAE (Glutathione peroxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPS4_9PHAE) HSP 1 Score: 182 bits (462), Expect = 2.250e-56 Identity = 86/118 (72.88%), Postives = 101/118 (85.59%), Query Frame = 1
Query: 7 AVLVVNVATYCGYTDSNYRELQALRAKYDEDKLAILAFPCNQFGAQEPGTHEEILSFVDKQYGVTFSIMNKIDVNGDGADPLFKWLKAASGDGRDISWNFTKFLVVGGKEVKRYSHQV 360
AVL+VNVA++CGYTD +YRELQALRAK+DED+LAI+AFPCNQFGAQEPGT EEI S D ++GVTF IM+KIDVNG + P+F WLKAASG+ DI WNFTKFLV+ G VKRYSH+V
Sbjct: 46 AVLIVNVASHCGYTDRDYRELQALRAKHDEDQLAIVAFPCNQFGAQEPGTWEEIASLADGKFGVTFPIMSKIDVNGLHSSPIFAWLKAASGNPHDIPWNFTKFLVLCGSTVKRYSHEV 163
BLAST of mRNA_H-paniculata_contig1849.4553.1 vs. uniprot
Match: D8LS13_ECTSI (Glutathione peroxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS13_ECTSI) HSP 1 Score: 159 bits (403), Expect = 9.840e-48 Identity = 75/119 (63.03%), Postives = 93/119 (78.15%), Query Frame = 1
Query: 4 QAVLVVNVATYCGYTDSNYRELQALRAKYDEDKLAILAFPCNQFGAQEPGTHEEILSFVDKQYGVTFSIMNKIDVNGDGADPLFKWLKAASGDGRDISWNFTKFLVVGGKEVKRYSHQV 360
+AVL+VNVA+ C + NY ELQALR YDE++LAI+AFPCNQFG QEPG+ +EI S ++++GVTF IM K++VNG + PLF WLKAASG +I WNFTKFLVVGG V RYSH+V
Sbjct: 30 RAVLIVNVASQCSTAERNYLELQALREAYDEEELAIVAFPCNQFGGQEPGSWQEISSSAERRFGVTFPIMGKVEVNGLRSQPLFAWLKAASGVPGNIEWNFTKFLVVGGNHVTRYSHEV 148
BLAST of mRNA_H-paniculata_contig1849.4553.1 vs. uniprot
Match: A0A835YHD0_9STRA (Glutathione peroxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHD0_9STRA) HSP 1 Score: 150 bits (380), Expect = 9.480e-44 Identity = 70/117 (59.83%), Postives = 88/117 (75.21%), Query Frame = 1
Query: 13 LVVNVATYCGYTDSNYRELQALRAKYDEDKLAILAFPCNQFGAQEPGTHEEILSFVDKQYGVTFSIMNKIDVNGDGADPLFKWLKAASGDGRDISWNFTKFLVVGGKEVKRYSHQVT 363
LVVNVA+ CGYTD+NYRELQ L +Y+ED +LAFPCNQFG+QEPG+ +I F ++YGVTF +M K++VNGDG DPLF +LK A+G G + WNF+KFLVV G K YSH +
Sbjct: 55 LVVNVASQCGYTDTNYRELQQLYEEYEEDGFIVLAFPCNQFGSQEPGSPADIRDFTTEKYGVTFPLMAKVEVNGDGEDPLFTFLKEATGSG-PLKWNFSKFLVVNGVPRKHYSHSTS 170
BLAST of mRNA_H-paniculata_contig1849.4553.1 vs. uniprot
Match: A0A1V9ZWS9_9STRA (Glutathione peroxidase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZWS9_9STRA) HSP 1 Score: 147 bits (372), Expect = 6.580e-43 Identity = 75/118 (63.56%), Postives = 87/118 (73.73%), Query Frame = 1
Query: 4 QAVLVVNVATYCGYTDSNYRELQALRAKYDEDKLAILAFPCNQFGAQEPGTHEEILSFVDKQYGVTFSIMNKIDVNGDGADPLFKWLKA--ASGDGRDISWNFTKFLVVGGKEVKRYS 351
+A+LVVNVA+ CG+T+SNY+ELQ L KY E L ILAFPCNQFG QEPG++EEIL+F K Y VTF I KIDVNGD ADPLFK+LKA DI WNFTKFL+ G KRY+
Sbjct: 38 KAILVVNVASACGFTNSNYKELQTLYNKYHEKGLEILAFPCNQFGGQEPGSYEEILAFTQK-YEVTFPIFQKIDVNGDNADPLFKYLKAELTGTITNDIKWNFTKFLIAYGNPYKRYA 154
BLAST of mRNA_H-paniculata_contig1849.4553.1 vs. uniprot
Match: A0A5D6YRU9_9STRA (Glutathione peroxidase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YRU9_9STRA) HSP 1 Score: 148 bits (374), Expect = 6.840e-43 Identity = 77/118 (65.25%), Postives = 85/118 (72.03%), Query Frame = 1
Query: 1 KQAVLVVNVATYCGYTDSNYRELQALRAKYDEDKLAILAFPCNQFGAQEPGTHEEILSFVDKQYGVTFSIMNKIDVNGDGADPLFKWLKAASGD--GRDISWNFTKFLVVGGKEVKRY 348
K+AVLVVNVA+ CGYTD NYRELQAL AKY+ L ILAFPCNQFGAQEPGT E+I SFV Y VTF + K+DVNG A PLF +LK DI WNFTKFLVV G+ KRY
Sbjct: 55 KRAVLVVNVASACGYTDQNYRELQALYAKYEARGLEILAFPCNQFGAQEPGTPEQIRSFVHDTYAVTFPVFAKVDVNGARAHPLFAFLKRKLSGFITADIKWNFTKFLVVDGEPFKRY 172
BLAST of mRNA_H-paniculata_contig1849.4553.1 vs. uniprot
Match: A0A1V9Z3Y6_9STRA (Glutathione peroxidase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z3Y6_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.480e-40 Identity = 67/118 (56.78%), Postives = 88/118 (74.58%), Query Frame = 1
Query: 4 QAVLVVNVATYCGYTDSNYRELQALRAKYDEDKLAILAFPCNQFGAQEPGTHEEILSFVDKQYGVTFSIMNKIDVNGDGADPLFKWL-KAASGD-GRDISWNFTKFLVVGGKEVKRYS 351
+A+LVVNVA+ CG+TDSNYRELQ+L KY + L IL FPCNQFGAQEPG++ +I+++ + Y VTF I K+DVNGD A P+FK+L +A +G DI WNFTKFL+ G+ RY+
Sbjct: 43 KAILVVNVASACGFTDSNYRELQSLYTKYHDQGLEILGFPCNQFGAQEPGSYADIVAYTQRNYDVTFPIFQKVDVNGDNAAPVFKYLTEALTGSFTNDIKWNFTKFLIAHGRPYARYA 160
BLAST of mRNA_H-paniculata_contig1849.4553.1 vs. uniprot
Match: A0A3M6VL97_9STRA (Glutathione peroxidase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VL97_9STRA) HSP 1 Score: 142 bits (359), Expect = 1.560e-40 Identity = 69/118 (58.47%), Postives = 86/118 (72.88%), Query Frame = 1
Query: 4 QAVLVVNVATYCGYTDSNYRELQALRAKYDEDKLAILAFPCNQFGAQEPGTHEEILSFVDKQYGVTFSIMNKIDVNGDGADPLFKWLKAASGDG---RDISWNFTKFLVVGGKEVKRY 348
+ +LVVNVA+ CGYTD NYRELQ L+ KY ++ +L FPCNQFG QEPGT +EI+ F ++Y VTF I +K+DVNGD A PLF+++K DG DI WNFTKFLVV + VKRY
Sbjct: 52 RVILVVNVASECGYTDKNYRELQELQEKYYDEGFTVLGFPCNQFGGQEPGTADEIMKFTQEKYHVTFPIFSKVDVNGDKAHPLFQFVKKQL-DGFVTNDIKWNFTKFLVVNHEPVKRY 168
BLAST of mRNA_H-paniculata_contig1849.4553.1 vs. uniprot
Match: W7TAD6_9STRA (Glutathione peroxidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TAD6_9STRA) HSP 1 Score: 142 bits (358), Expect = 1.710e-40 Identity = 68/123 (55.28%), Postives = 86/123 (69.92%), Query Frame = 1
Query: 1 KQAVLVVNVATYCGYTDSNYRELQALRAKYDEDKLAILAFPCNQFGAQEPGTHEEILSFVDKQYGVTFSIMNKIDVNGDGADPLFKWLKA-----ASGDGRDISWNFTKFLVVGGKEVKRYSH 354
K VL+VNVA+ CGYTDSNYR+LQ L+ KY +D L +LA P N+FG QEPG+ EIL F ++Y VTF + +K+ VNG A L+KWLKA +S DI WNFTKFL+V G VKR++H
Sbjct: 56 KPVVLIVNVASRCGYTDSNYRQLQVLQEKYGDDGLQVLAMPSNEFGGQEPGSDAEILKFTKEKYAVTFPVFSKLLVNGPQASDLYKWLKAETPKDSSSSSADIRWNFTKFLLVNGLPVKRFAH 178
BLAST of mRNA_H-paniculata_contig1849.4553.1 vs. uniprot
Match: G4ZTH2_PHYSP (Glutathione peroxidase n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZTH2_PHYSP) HSP 1 Score: 141 bits (355), Expect = 1.800e-40 Identity = 70/118 (59.32%), Postives = 82/118 (69.49%), Query Frame = 1
Query: 4 QAVLVVNVATYCGYTDSNYRELQALRAKYDEDKLAILAFPCNQFGAQEPGTHEEILSFVDKQYGVTFSIMNKIDVNGDGADPLFKWLKAASGDG---RDISWNFTKFLVVGGKEVKRY 348
+ +LVVNVA+ CGYTD NYRELQ L KY ++ +L FPCNQFG QEPGT E IL F ++Y VTF + K+DVNGD A PLFK+LK DG DI WNFTKFLVV + KRY
Sbjct: 8 RVILVVNVASDCGYTDKNYRELQELYEKYHDEGFMVLGFPCNQFGGQEPGTAEGILKFTQEKYHVTFPLFTKVDVNGDNAHPLFKFLKQQL-DGFITNDIKWNFTKFLVVNHEPFKRY 124
BLAST of mRNA_H-paniculata_contig1849.4553.1 vs. uniprot
Match: A0A3R7JUE6_9STRA (Glutathione peroxidase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JUE6_9STRA) HSP 1 Score: 142 bits (357), Expect = 3.400e-40 Identity = 70/116 (60.34%), Postives = 84/116 (72.41%), Query Frame = 1
Query: 10 VLVVNVATYCGYTDSNYRELQALRAKYDEDKLAILAFPCNQFGAQEPGTHEEILSFVDKQYGVTFSIMNKIDVNGDGADPLFKWLKAASGDG---RDISWNFTKFLVVGGKEVKRY 348
+LVVNVA+ CGYTD NYRELQ L ++ +D L ILAFPCNQFG QEPGT +EIL F +++Y VTF + K+DVNGD PLFK+LK DG DI WNFTKFL+V + KRY
Sbjct: 57 ILVVNVASECGYTDQNYRELQELYDRHHDDGLMILAFPCNQFGRQEPGTPDEILKFTEEKYHVTFPLFTKVDVNGDKTHPLFKFLKIKL-DGFVTNDIKWNFTKFLIVNHEPFKRY 171 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1849.4553.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1849.4553.1 >prot_H-paniculata_contig1849.4553.1 ID=prot_H-paniculata_contig1849.4553.1|Name=mRNA_H-paniculata_contig1849.4553.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=121bp KQAVLVVNVATYCGYTDSNYRELQALRAKYDEDKLAILAFPCNQFGAQEPback to top mRNA from alignment at H-paniculata_contig1849:1319..2383+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1849.4553.1 ID=mRNA_H-paniculata_contig1849.4553.1|Name=mRNA_H-paniculata_contig1849.4553.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1065bp|location=Sequence derived from alignment at H-paniculata_contig1849:1319..2383+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1849:1319..2383+ >mRNA_H-paniculata_contig1849.4553.1 ID=mRNA_H-paniculata_contig1849.4553.1|Name=mRNA_H-paniculata_contig1849.4553.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=726bp|location=Sequence derived from alignment at H-paniculata_contig1849:1319..2383+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |