|
|
Homology
BLAST of mRNA_H-paniculata_contig1848.4548.1 vs. uniprot
Match: D8LQ17_ECTSI (Katanin p80 WD40 repeat-containing subunit B1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ17_ECTSI) HSP 1 Score: 338 bits (867), Expect = 1.660e-93 Identity = 321/918 (34.97%), Postives = 406/918 (44.23%), Query Frame = 2
Query: 3977 RAITFDPDGQRMYCASPSGLKRWSWDNDTAVTKLEALGDVAWGKVGAGALHYNADGRQLLAGACANNRVSVWAVDVDVETSTRKLNQQHPGVTSSSACGTFGDSISPAPGYPCESTVVAAAVAGKYGNGSXXXXXXDDSVKAASRSDGDSMSREQTCHGDGPELVWKEEKKESVAAPNGLAGFQLRGRHLSPSLIADAKTSXXXXXXXXXXXXXXXXXXXVHPRTXXXXXXXXXXXXXXXXXXXXXXAHGTPCYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSNSGRYRSVGTSVSDTLVLGSLAPDTAGSNNLRDGGRGRGGXXXXXXXXXXXXXXXNKNGSAGSAAARFGSGGNDLVGAGXXXXXAGTEAGMRPGSVLKGRRDPRTAGGEGARSCWPEGEVVAPGKHDHYAERGQDEGRLRERGGDRDKLYKLEVELPPAERYQGSSNALVDAGDGARRRLETKGGVGATPAVVPTVDTPTAPANKTPWHIPPEVLKTPRCTEVVGAERGEAAAATATGIGEDSPPLLGSPSPSPART--PKQRPLSLSSSPSPTGHAPDGAQS-ERRHGLPGRTAAPAALAAAPAAAAGPGLG-SVRLAPGAGGIASSSCYPGATENTPVALD-------------------ARSGKGAAVGEMGGFDGVNVGVSGGGHDGGCRGGDDGVAESSDSGWVAGDGELGMTRPRTATRRWDRPGPLGDDEVIAKTLLSRSATTSTLSNRLNQLRLLRSGWAEGDISGTIAKLKRLECSATPADFSPRIVVSDFLSVVALEQGAAVTLEHCLDLMPLLEDLWKLDVENSVAAGTRCLESVVRRFGGYVRDTLRAPATSGAGVDLAREERIDRCREAHRAFVRGYHQLERTEREFYEDRRIASVAARLRPLFETYFIS 6661
RAITFDPDGQ+MYCASPSGL+RWSWDNDTA +LEA+GDV WGKVGAGALHYNADG+Q +R + + D + S + ++ P + ++ G G + + A V G+ ++ V+++S G + + G +V P+ G +L+ RH + + A XXXXXXXX + R+RSVGTS+SDTLV+ TA + R GGR + G+ G + R + +V AG G RR W + A + A+ + R + GGD G N D R E G A A V + TP N PW P+ + V E G G G+DSPPLLGSP P+PA P + S PS + +PD Q E+ H + R++A +G + A G+ +G +V ++ G ELGMTRPRTATRRWDRPGP GDDEVIAKTLLSR+ TSTLSNRL LR+LR GWA+GD+SGTI+KL RLE SAT AD SPR VV+DFL VV L+ G VTL+HCL+LMPLLE LWKLD + VAA TRCLES+VRRFGG++RDTL AP +G VDLARE+RI RCREAHRAF+RGYH LER+E EFYEDRRIA+VA RLRPLFE+YF+S
Sbjct: 240 RAITFDPDGQKMYCASPSGLRRWSWDNDTASARLEAMGDVPWGKVGAGALHYNADGQQQ----SRPSRGNTFPASRDGQRSHSRDSK--PTMEKEASGGDDGSXXXXCXXXXXXAGMPAFQVLGRQVV--LLPTAAEEKVRSSSPLGGPAATPXXXXSG------------VTVGGPSSAVGGRLQNRHAARAEAVAATVXXXXXXXXXTDDAVASVAGSI-----------------------------------------------------------------------------RHRSVGTSISDTLVIADGG--TADQADDRAGGR-----EHRPAAWSEPAPGKDDGGNYGRDSGRGVAAALGVVAAGDRHRLGGE------------RRXXXXXXXXXDECKWHKRVAGAFAGVEGTADDEKGVERRGDSGGD----------------GSGGKNRGKRTADEKEARREEDGTDRAANAGVSSGVTPRFTVN--PW---------PKDSRV---EAGGRIRTEVPGGGQDSPPLLGSPEPAPAAASNPARSKNEPPSFPSSSRRSPDRPQPREKTHAVVTRSSA---------------VGFPITTADGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEPEGLSVADIFGX----------------------XXXXXXXXXXXXXDELGMTRPRTATRRWDRPGPPGDDEVIAKTLLSRATATSTLSNRLTHLRMLRYGWADGDVSGTISKLTRLERSATVADDSPRTVVADFLWVVPLD-GTRVTLDHCLELMPLLEGLWKLDAGSCVAAATRCLESIVRRFGGFIRDTLAAPVAAGR-VDLAREDRIARCREAHRAFIRGYHHLERSEGEFYEDRRIAAVAERLRPLFESYFMS 972
BLAST of mRNA_H-paniculata_contig1848.4548.1 vs. uniprot
Match: A0A6H5K3J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J5_9PHAE) HSP 1 Score: 258 bits (658), Expect = 6.960e-67 Identity = 308/879 (35.04%), Postives = 386/879 (43.91%), Query Frame = 2
Query: 3977 RAITFDPDGQRMYCASPSGLKRWSWDNDTAVTKLEALGDVAWGKVGAGALHYNADGRQLLAGACANNRVSVWAVDVDVETSTRKLNQQHPGVTSSSACGTFGDSISPAP-GYPCESTVVAAAVAGKYGNGSXXXXXXDDSVKAASRSDGDSMSREQTCHGDGPELVWKEEKKESVAAPNGLAGFQLRGRH--LSPSLIAD-AKTSXXXXXXXXXXXXXXXXXXXVHPRTXXXXXXXXXXXXXXXXXXXXXXAHGTPCYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSNSGRYRSVGTSVSDTLVLGSLAPDTAGSNNLRDGGRGRGGXXXXXXXXXXXXXXXNKNGSAGSAAARFGSGGNDL--VGAGXXXXXAGTEAGMRPGSVLKGRRDPRTAGGEGARSCWPEGEVVAPGKHDHYAERGQDEGRLRERGGDRDKLYKLEVELPPAERYQGSSNA----LVDAGDGARRRLETKGGVGATPAVVPTVDTPTAPANKTPWHIPPEVLKTPRCTEVVGAERGEAAAATATGIGEDSPPLLGSPSPSPART--PKQRPLSLSSSPSPTGHAPDGAQ-SERRHGLPGRTAAPAALAAAPAAAAGPGLGSVRLAPGAGGIASSSCYPGATENTPVALDARSGKGAAVGEMGGFDGVNVGVSGGGHDGGCRGGDDGVAESSDSGWVAGDGELGMTRPRTATRRWDRPGPLGDDEVIAKTLLSRSATTSTLSNRLNQLRLLRSGWAEGDISGTIAKLKRLECSATPADFSPRIVVSDFLSVVALEQGAAVTLEHCLDLMPLLEDLWKLD----------VENSVAAGTRCLESVVRRFGGYVRDTLRAPATSGAGVDLAREERIDRCREAHR 6544
RAITFDPDGQ+MYCASPSGL+RWSWDN A +LEA+GDV WGKVGAGALHYNADG+Q A+ + T+T + P ++++ +GD+ + P P A+ G+ ++ SR +M +E + DG P FQ+ GR L P+ + AK S XXXXXXXXXXXXXXXX P + XXXX X + S R+RSVGTS+SDTLV+ TA + R GGR ++ + A GGN + G G AG R L G R +G W + A + A+ + R + GGD + +G NA GDG R G T + TVD PW P+ + V R A G GEDSPPLLGSP P+PA P + S PS + +PD Q S++ + R++A + G +G +V ++ G G + G GGG D ELGMTRPRTATRRWDRPGP G+DEVIAKTLLSR+ TSTLSNR GWA+GD+SGTI+KL RLE SAT AD SPR VV+DFL VV L+ G VTL+HCL+LMPLLE LWK+ VAA TRCLES+VRRFGG++RDTL AP +G VDLARE+R+ RCREAHR
Sbjct: 219 RAITFDPDGQKMYCASPSGLRRWSWDNHIASAQLEAMGDVPWGKVGAGALHYNADGQQGRNLGAASESSAPLDTPARGATTTATESPSDPSLSTTDR--EYGDADAKVPESRPSRGNTFPASRDGQ---------------RSHSRDSKPTMEKEASGGDDGSXXXXXXXXXXXXXMP----AFQVLGRQVVLLPTAAEEKAKPSSPXXXXXXXXXXXXXXXXVGGPASAGGGRIQNRHAARAEAVAXXXXXXXXXXXXTDDAVASV-------------------------------AGSIRHRSVGTSISDTLVIADGC--TADQADDRAGGR------------------EHRPAAWSEPAPGKDDGGNYVRDCGRGVAAALGVVAAGDR--HRLSGERRATGGADDGDECKWHKRVAGAFAGVEGTADDEKGMERRDDSGGD-----------GSGGKTRGKGNADEKEARREGDGTDRAANVGVPSGVTSRM--TVD---------PW---------PKDSWVEAEGRNRAGV---PGGGEDSPPLLGSPEPAPAAASNPARSMNEPPSFPSSSRRSPDRPQPSDKTDTVVTRSSAVGFPITTADGSISGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGPEPEGLSVADIFGDGGGDCG--GGGSD-----------------------ELGMTRPRTATRRWDRPGPPGEDEVIAKTLLSRATATSTLSNRY--------GWADGDVSGTISKLTRLERSATVADDSPRTVVADFLWVVPLD-GTRVTLDHCLELMPLLEGLWKVAETPACLPSFLTTRCVAAATRCLESIVRRFGGFIRDTLTAPVAAGR-VDLAREDRVARCREAHR 954
BLAST of mRNA_H-paniculata_contig1848.4548.1 vs. uniprot
Match: W7TAD1_9STRA (Katanin p80 wd40 repeat-containing subunit b1-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TAD1_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 1.550e-14 Identity = 60/164 (36.59%), Postives = 85/164 (51.83%), Query Frame = 2
Query: 6095 DDEVIAKTLLSRSATTSTLSNRLNQLRLLRSGWAEGDISGTIAKLKRLECSATPADFSPRIVVSDFLSVVAL----EQGAAVTLEHCLDLMPLLEDLWKLDVENSVAAGTRCLESVVRRFGGYVRDTLRAPATSGAGVDLAREERIDRCREAHRAFVRGYHQLE 6574
D E+I T+L R + LS RL L+ L W G + T L RL ATP D V+SDFL V L + ++LE L+P+L L LD E V AG + L +++ G +V+ LR P + G+DL REER++RCR+ + A + +LE
Sbjct: 459 DGEIIFGTMLHRKVLMTALSVRLENLQRLNELWRAGKVPETFGLLFRLH-QATPEDQGRLTVLSDFLQTVDLLGCASEHGPLSLETAAPLLPVLNSLLSLDFEGPVLAGIKTLMALLDLLGTHVQQVLRTPLS---GLDLTREERVERCRKFNEAISYSFKRLE 618
BLAST of mRNA_H-paniculata_contig1848.4548.1 vs. uniprot
Match: A0A482STH4_9ARCH (Katanin_con80 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482STH4_9ARCH) HSP 1 Score: 79.3 bits (194), Expect = 8.500e-11 Identity = 54/192 (28.12%), Postives = 97/192 (50.52%), Query Frame = 2
Query: 6101 EVIAKTLLSRSATTSTLSNRLNQLRLLRSGWAEGDISGTIAKLKRLECSATPADFSPRIVVSDFLSVVALEQGAAVTLEHCLDLMPLLEDLWKLDVENSVA--------AGTRCLESVVRRFGGYVRDTLRAPATSGAGVDLAREERIDRCREAHRAFVRGYHQLERTEREFYEDRRIASVAARLRPLFETY 6652
+++ LL S T+ LSNRL LR+L+ W +G + + L+ L + + ++SDF V L ++L+ C+ ++P+L+D+ +ENS + + + L S++ FG +R+T R+ +G GVDL RE R+++C + FV +LE + F ++ + V + L TY
Sbjct: 598 DLVDSLLLHSSRLTADLSNRLVSLRILKQLWVKGQVLDALGHLQGLADAMKLNNPQQVHLLSDFFGAVDLRGNGVLSLDACVQMLPILQDM----LENSTSWHNQAVTFSTFKSLNSLLEAFGELIRNT-RSMMVAG-GVDLTREARLNKCNVCYSVFVNARSRLETLKHHFRQNSLVYDVLDSYQRLCSTY 783
BLAST of mRNA_H-paniculata_contig1848.4548.1 vs. uniprot
Match: A0A6H5KR45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR45_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 2.070e-10 Identity = 36/66 (54.55%), Postives = 43/66 (65.15%), Query Frame = -3
Query: 2630 PTIYA------TRIGCLLHVLHNVVTSGMESECFMGTLGTGSWHEWPHQHLVSLLGSIWYNTSRLN 2809
P IYA R+G +LH+LH +T+G S FMG LG GSWHEW H+ SLLG +WYNTSR N
Sbjct: 55 PIIYAHRLRLRXRLGYVLHILHISITAGFTSVFFMGPLGKGSWHEWGTSHVFSLLGMVWYNTSRSN 120
BLAST of mRNA_H-paniculata_contig1848.4548.1 vs. uniprot
Match: A0A507E890_9FUNG (Katanin p80 WD40 repeat-containing subunit B1 homolog n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E890_9FUNG) HSP 1 Score: 75.5 bits (184), Expect = 1.190e-9 Identity = 47/169 (27.81%), Postives = 85/169 (50.30%), Query Frame = 2
Query: 6080 PGPLGDDEVIAKTLLSRSATTSTLSNRLNQLRLLRSGWAEGDISGTIAKLKRLECSATPADFSPRIVVSDFLSVVALEQGAAVTLEHCLDLMPLLEDLWKLDVENSVAAGTRCLESVVRRFGGYVRDTLRAPATSGAGVDLAREERIDRCREAHRAFVRGYHQLERTER 6586
P P D +++ L ++ S L +RL +R++R W E ++ I L+ L+ SA V+ D L ++ L+ +TL+ L ++P+L +++ E+ + L +V+ F + L A + S GVD++RE+RI RCR + F+ + LE +R
Sbjct: 525 PPPTSDQDIMDSVLFRHASVASILHSRLASIRMVRQVWDENNVKHAIESLQALKDSA---------VLVDILRIINLKPKL-LTLDTALLMLPMLHEVFFEVYEDYIVTACTTLRLLVKSFSHVILSGLDADSLSSPGVDISREDRIQRCRGCYEHFINVANTLEELKR 683
BLAST of mRNA_H-paniculata_contig1848.4548.1 vs. uniprot
Match: A0A061QZZ4_9CHLO (Katanin p80 WD40 repeat-containing subunit B1 homolog n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QZZ4_9CHLO) HSP 1 Score: 73.2 bits (178), Expect = 5.980e-9 Identity = 46/149 (30.87%), Postives = 76/149 (51.01%), Query Frame = 2
Query: 6101 EVIAKTLLSRSATTSTLSNRLNQLRLLRSGWAEGDISGTIAKLKRLECSATPADFSPRIVVSDFLSVVALEQGAAVTLEHCLDLMPLLEDLWKLDVENSVAAGTRCLESVVRRFGGYVRDTLRAPATSGAGVDLAREERIDRCREAHRA 6547
EV+++ L + LS R + L+++R WA+GD+ G +A LKR + + V +D L VV +Q A LEHC +++P+L+DL + ++++ +G +R T A SG G D+A E R ++C A A
Sbjct: 518 EVLSELLGKHPTMLAVLSTRSSNLQVVRGLWAKGDVRGALAALKRCQDQS---------VAADLLGVVGKQQDA-FKLEHCGEVLPILDDLLASTHDQWQLVAAETCANLLKSYGQIIRSTFSA--VSGIGPDMAMEARREKCTNAKNA 654
BLAST of mRNA_H-paniculata_contig1848.4548.1 vs. uniprot
Match: UPI001FB6F101 (katanin p80 WD40 repeat-containing subunit B1 n=1 Tax=Mugil cephalus TaxID=48193 RepID=UPI001FB6F101) HSP 1 Score: 72.4 bits (176), Expect = 1.030e-8 Identity = 46/152 (30.26%), Postives = 78/152 (51.32%), Query Frame = 2
Query: 6077 RPGPLGDDEVIAKTLLSRSATTSTLSNRLNQLRLLRSGWAEGDISGTIAKLKRLECSATPADFSPRIVVSDFLSVVALEQGAAVTLEHCLDLMPLLEDLWKLDVENSVAAGTRCLESVVRRFGGYVRDTLRAPATSGAGVDLAREERIDRCR 6532
RPG LGD++ +++ + LS+R L +R+ WA DI L+ + + +D S +V D L+++ L L+ C ++P ++ L + E+ V G L+ +++ F + DTL+A T GVD+ REER+ RCR
Sbjct: 502 RPGALGDEDALSQIKKGHDTMSVMLSSRHKNLETVRAVWAREDIKSA------LDAAVSMSDLS---IVVDVLNIINLHP-TLWKLDLCTSVLPQIDKLLQSKYESYVQTGCLSLKLIMKHFWILISDTLKA--TPSVGVDITREERLQRCR 641
BLAST of mRNA_H-paniculata_contig1848.4548.1 vs. uniprot
Match: A0A507CIJ2_9FUNG (Katanin p80 WD40 repeat-containing subunit B1 homolog n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CIJ2_9FUNG) HSP 1 Score: 72.4 bits (176), Expect = 1.090e-8 Identity = 52/183 (28.42%), Postives = 88/183 (48.09%), Query Frame = 2
Query: 6017 VAGDGELGMTRPR--TATRRWDRPGPLGDDEVIAKTLLSRS--ATTSTLSNRLNQLRLLRSGWAEGDISGTIAKLKRLECSATPADFSPRIVVSDFLSVVALEQGAAVTLEHCLDLMPLLEDLWKLDVENSVAAGTRCLESVVRRFGGYVRDTLRAPATSGAGVDLAREERIDRCREAHRAFV 6553
+GD LG+ + ++ D P V+++ LS + T +LS RL LR +R+ W + G ++ A DFS V DFL ++ + +TLE C +P+L++L E V + + R FG + +TL + + +G+D+ REERI++C+ HR F+
Sbjct: 535 ASGDRPLGLDISKFVQSSGNCDSIAPDSTQLVLSQPSLSEHHVSVTKSLSARLTALRTVRAAWTSAGLRGA------MDACAAIQDFS---VWVDFLKILCAKPKL-LTLESCALFLPVLDELLFAVYEEYVVVACGTIRILARHFGRVIVETLESAQHNTSGIDITREERIEKCKACHRGFL 707
BLAST of mRNA_H-paniculata_contig1848.4548.1 vs. uniprot
Match: A0A0L0HDE2_SPIPD (Katanin p80 WD40 repeat-containing subunit B1 homolog n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HDE2_SPIPD) HSP 1 Score: 72.0 bits (175), Expect = 1.370e-8 Identity = 47/169 (27.81%), Postives = 82/169 (48.52%), Query Frame = 2
Query: 6080 PGPLGDDEVIAKTLLSRSATTSTLSNRLNQLRLLRSGWAEGDISGTIAKLKRLECSATPADFSPRIVVSDFLSVVALEQGAAVTLEHCLDLMPLLEDLWKLDVENSVAAGTRCLESVVRRFGGYVRDTLRAPATSGAGVDLAREERIDRCREAHRAFVRGYHQLERTER 6586
P P D+++I + ++ TS L++RL +R +R W E +I I + L+ S+ V D L ++ L+ +TL+ + L+P+L +L E+ + + +V+ F + T+ A S GVD++RE+RI RCR F+ LE +R
Sbjct: 516 PPPTSDNDIIDSLMFRHASITSILNSRLTSIRCIRQTWDETNIRQAIETMIELKDSS---------VCIDLLRIINLKPKL-LTLDVAILLLPVLNELLFEMYEDFIVTACATIRLLVKSFSHVIISTMNADNLSSPGVDISREDRIQRCRACRHGFIEISTTLEELKR 674
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 328.9 |
| Seed ortholog evalue | 7.1e-87 |
| Seed eggNOG ortholog | 2880.D8LQ17 |
| Preferred name | KATNB1 |
| KEGG ko | ko:K18643 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000151,GO:0000226,GO:0000922,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0005874,GO:0005875,GO:0005886,GO:0006605,GO:0006810,GO:0006886,GO:0006996,GO:0007010,GO:0007017,GO:0007026,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008017,GO:0008092,GO:0008104,GO:0008150,GO:0008352,GO:0009987,GO:0010638,GO:0010639,GO:0010720,GO:0010941,GO:0010942,GO:0010975,GO:0010976,GO:0015031,GO:0015630,GO:0015631,GO:0015833,GO:0016020,GO:0016043,GO:0022008,GO:0030154,GO:0030424,GO:0030426,GO:0030427,GO:0030496,GO:0030901,GO:0031110,GO:0031111,GO:0031112,GO:0031114,GO:0031117,GO:0031344,GO:0031346,GO:0031461,GO:0032501,GO:0032502,GO:0032886,GO:0032991,GO:0033036,GO:0033043,GO:0033267,GO:0034613,GO:0036477,GO:0042886,GO:0042995,GO:0043005,GO:0043025,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043242,GO:0043243,GO:0043244,GO:0044297,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044450,GO:0044463,GO:0044464,GO:0044877,GO:0045184,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0046907,GO:0046982,GO:0046983,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0051013,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051493,GO:0051494,GO:0051495,GO:0051641,GO:0051649,GO:0051960,GO:0051962,GO:0060284,GO:0060322,GO:0065007,GO:0070507,GO:0070727,GO:0070840,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0080008,GO:0097458,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0120025,GO:0120035,GO:0120038,GO:0150034,GO:1901879,GO:1901880,GO:1901881,GO:1902494,GO:1902903,GO:1902904,GO:1902905,GO:1990234,GO:2000026 |
| EggNOG free text desc. | microtubule severing |
| EggNOG OGs | KOG0267@1,KOG0267@2759 |
| COG Functional cat. | E |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko04812 |
| Exons | 8 |
| Model size | 7710 |
| Cds size | 2655 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1848.4548.1 >prot_H-paniculata_contig1848.4548.1 ID=prot_H-paniculata_contig1848.4548.1|Name=mRNA_H-paniculata_contig1848.4548.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=885bp
MYCASPSGLKRWSWDNDTAVTKLEALGDVAWGKVGAGALHYNADGRQLLA
GACANNRVSVWAVDVDVETSTRKLNQQHPGVTSSSACGTFGDSISPAPGY
PCESTVVAAAVAGKYGNGSGNGSGNDDSVKAASRSDGDSMSREQTCHGDG
PELVWKEEKKESVAAPNGLAGFQLRGRHLSPSLIADAKTSSSSSSSSPPL
APLLTTAANVHPRTPPASITTATTTGTITPAAGAATAHGTPCYSSSSSRR
PAQQNRAAAIAATVAAVASAKAATDDAVAAVSSSNSGRYRSVGTSVSDTL
VLGSLAPDTAGSNNLRDGGRGRGGGCDTAGGCGGSAGDGNKNGSAGSAAA
RFGSGGNDLVGAGGGGGGAGTEAGMRPGSVLKGRRDPRTAGGEGARSCWP
EGEVVAPGKHDHYAERGQDEGRLRERGGDRDKLYKLEVELPPAERYQGSS
NALVDAGDGARRRLETKGGVGATPAVVPTVDTPTAPANKTPWHIPPEVLK
TPRCTEVVGAERGEAAAATATGIGEDSPPLLGSPSPSPARTPKQRPLSLS
SSPSPTGHAPDGAQSERRHGLPGRTAAPAALAAAPAAAAGPGLGSVRLAP
GAGGIASSSCYPGATENTPVALDARSGKGAAVGEMGGFDGVNVGVSGGGH
DGGCRGGDDGVAESSDSGWVAGDGELGMTRPRTATRRWDRPGPLGDDEVI
AKTLLSRSATTSTLSNRLNQLRLLRSGWAEGDISGTIAKLKRLECSATPA
DFSPRIVVSDFLSVVALEQGAAVTLEHCLDLMPLLEDLWKLDVENSVAAG
TRCLESVVRRFGGYVRDTLRAPATSGAGVDLAREERIDRCREAHRAFVRG
YHQLERTEREFYEDRRIASVAARLRPLFETYFIS* back to topmRNA from alignment at H-paniculata_contig1848:4778..18107- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1848.4548.1 ID=mRNA_H-paniculata_contig1848.4548.1|Name=mRNA_H-paniculata_contig1848.4548.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=13330bp|location=Sequence derived from alignment at H-paniculata_contig1848:4778..18107- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCTGGCTCAACCACATGTTGGGTCATATAAAATTAACAATATTGTGGGA
CACCAGAAGGGACGAGGTAGACCCGGCCCTCACAACTATACGTATCGCCT
CCGATTGGCAGGTTACTGACAATCAGACGACCTCTGATATCATGCGCACG
GAATTTCCCAATATCAAGGATTAATCGCAGCTTACCGAGCCAATAACGGC
CTCCACCAAACCGCGTCTCCTCCCACCACAACGATCTCTAAGTCAGCATA
GAAACCCAATTCGCACTCCGTGTCGAAATCGAGATCAAAGTGAAATAATT
CCAGGCCTGGATTTTATTGGAGTGGGAGAAGAACAGGTGGACACCATAGT
TCGCCACCCCTGTTACCGCTGCAATGTGGTAATGACCACAGTCACCCTAC
ACACTAGTTACCATTCTGGGAAGGTAGTTCAGTAATAGAATGGTAGGCGG
GGGGGCTTGCTAACATCGAATTGCGATGTAGAGCGTTAGACACCTTTGCC
TAATGCTACAGCGTGCATGGACACCACGCTGGGTGTGGAACACATTTTTC
ATGAGCAGACCACAATGGTTTATATCGCCTCGTCATGAGACTCTTGGACC
CATTCATAGTTTTCAACTATATCTTCGTATGATTAAGTTGAAAGAGTTAA
TATGCTTGTTGCACCATTACCTGCGGGAGCTGACATACCCGTATCACCAT
TAATACTACGAAGCGAAGATAATTGGGTTCCCATCGCAACAGTAAGGTCA
ACTTTATTCAGGTGTGACAATTCGTTGTAATGTGGTTCAACTTCGACCGG
AGGTCTACGCGAACCTACCCGCCGCGGCGATTGAGTTAATTCATGATGAC
AAACGAGATGTTCCGACTGCTCAATTATTGCAATGACCGGCAGGATTATG
TCTCGCTCAATCGTTATGATAATCGGCAGCAACACGAGACAATCCAATCA
TTATGATAAGCGGTAGCAACATAAGACTGCTCAATTATTGCAATGACCGG
CAGTATTATGTCCCGTACAATCAGTGTGATAACCGGCAGCAACACAAGAT
TACTCAATAATTACAATGACCGACAGGGAAATCACCCGCTCTAGTCATTA
TGATAATCGGCAGCAACAAGACAATCCAATCATTATGATAAGACCGGTAG
CAACATAAGACTGCTCAATTATTGCAATGATCGACAGGATTATGTGTAAC
ACAAAACTGCTCAAATATTACAATTACCGGCAGTATTATGTCCCGTACAA
TCAGTATGATAACCGGCAGCAACATGACAATGCAATAATTACGATGACCG
GCAGGAAAATCACCCGCTCAGTCATTATGATAAGCGGTAGCAACATAAGA
TTGCTCAATTATTAGAATGGCCAGCAGGATTATGTCCCACTCATTGAAAA
AACCGGCAGCAAACAAACCTGCTCAGCCATTACAATGACCGGCAGGAGAA
CAGTAGCTGAAGGGCCACGGCAACAATAGTTCACAATATCACTGGACAAG
ACTCGGTGGTATGTTGTGGCTAAACCCAAGACACTGCTGTTAGGGGTGCG
CCTAAGCCCGATTTGAGGCCGATTTTTGGTGACAACGACCACGCAGTAAA
GCGCCGTATTAAGAAACAAACGTGTGTATCCCCGGACAGATAACGCCACC
TACACCCCGCAAAGTACTTGTATTCAGTGTCGGGTTTCCACGCACTTGTA
ACCTGAATTACTCGATACACGTTAGGAACTGGCTCGTGAGACTCAACACA
CACTTGGGTATGTGCCTCTTCTAGGGCTTGATCTTGCTGGGCTTTTAATC
CGCGTTATGAGAATCCCAAACGCCCCAACAAATTGTGCTTTTTGTTCTAC
TTTCTCTGTGAACATGTTCTTTCCTCATGACTTCAAAAATACATGAAGCT
GAACCCCTAACTGTGGTTTCCGCGCGCACGATGCAAAAAACCGCACCCCA
ATCGACGACCTTGCTGAGGAGAATTTTGATTCACCAGATAGCCCATCAAC
ACAAACAATCACCCCAAACTAGTCGAATTTAAAAATTGCCCATCAACACC
TAAAAAGCACCCAAAAAACCTCGAATTTAGAGTGCAGGAGAGGACATCCT
TTCAAACGTAAATATTCTTCACACATGTGGCTGTTAGGGAATGACTGGGT
GGTCGTACGGGCATACTTCGCGTTGCATGTTGCAATGGTTGTAGCTCGTT
GTTGTAACCAGCATTCTCAGGGTCCCAAAGCATTCGAAACTTAGCTTTGC
TCGGCCTTTTTCCCGTCTAGCTGTGAGCTGCAGCAGTACATGATAAAGGG
GACAACATGGTTAACACAGCAGCAGCAGCTCTGCTTCTTCGCGCATCCTA
TGCTAAATCACCCTCCAATCCACGACTTTACTGCGGAGCTCAGTATGCTA
AGGCTGAAAAAAAAAAGCCGAGGTGGTCAACGAGTTTTGCGGAGGAAGAT
GAGCAGAGTGTGGCTCGGCGTGCACGGGAGCTCGCACTGCCTCTACAATA
GCAGCTCATCCACCAGAATATGAGGATCGCAGGGGCAAAGGGAGCTCCAT
GCCATGGAGATATTGCACGCTATGATGATGAACAGGAAGAAGCAGCAGGG
GAAATCCCGTGCAACATTGAGGAGGTAGGTCAGAAGCGACACTAGTAGCA
GCAGCAGTCGTTTCCCTCAGTTGCTTTTGCGACCTGCTATAACGAAGGTT
TTTACTCCTGCGTTTTTTTTCCATGTACGTTTAGCGAATTCGTTTTTTTT
ACGCCGTCGTCGCAGCAGCAGTTGCTGCAGCTGCTGTTGCTGCTGCTAGT
ACGTGTATATGTATGATTCACGCCAGCATTGCAACAACAGCTGTAGAGAC
CAGCAGCAACAGACTGCTGTATGTGCTAAAAGCACGCGGGCGCTCATTGT
GTACATTGTGCACTCCCACGACATACAAAAACAAGACTTGTTCGACATTC
TAGACGACCACATGTGTACAGCTATTTGATTTCGACGCCGCCGCTGCTGC
TGCTGTCTGCTTTCGTTAACCCATTCTTTCCGCAGTCAAGGTTCAATCTG
CTGGTATTGTACCAGATAGAACCGAGCAACGATACAAGATGTTGATGCGG
CCACTCATGCCACGATCCCGTGCCAAGGGTGCCCATGAAGCACTCACTCT
CCATCCCTGACGTCACGACGTTGTGGAGGACATGCAAGAGACAACCAATG
CGTGTTGCATAGATGGTGGGAGGTGTGGTCGCTGCTGCTGCTGCTGCTGC
TGCATTTTGGCATGTCGTAGCAGCGACCGGGAGCGGCTGCTCTTGCTTGT
ACTCGGCCATTTTCCCAGTGCCGTCCGGCCACTGAATGCGGTCTACTCAG
GCTGGTGTGGGATGCCGTGCGTGCTGTGTACGCAGATTCTACTGCTGTTG
CACGCAGAGGGAGACAGTGAGAGGCAGCTCTCGCCTGTGGAGGAGTCTCT
CTGTTCTGTCTGTAGCTCCTCAACCTTTCTGATGGCTTCTTCTGGGTTGT
TCATGTTTTCGAATTTTTTTAATACCCTGCCTCTTTCGGGACTAATCATT
TTTTAGTTTCTTAAGCTTACGCTGGGTTTCTAGGTGTTTATTATGTTTGT
TTCTACTATTATCAGGTGACGTTGGGTCTCTCGATGATTGTGTGTGTGTT
TTTTTTGGGTGACGTCAACTTTATTTTTTTTCTTATTTGACCCAAACCCT
CTAAAAAGCTTGCACTAAATACGTGGTCGTCGCGAAAAGTTACGTGGTGT
TTGCGACATAATTACCGTACTATAGAGGACTCAGGCGCACCCCTAACTGT
GCTGAGCTCTCATGGTGATCAATATCCTAATGAGACAAAATGGGGTAATG
CGAAACTATTCAACAATCATTCGTTCGGTACTGCTAGGTGTGGCTCCCGA
CACGAACCCAGCGATATAACTCGAAACATCGTTGATAAGTCCGTATTACC
TCATGTATGTGTAGTTGGGTCCGTCAGTATCGGCCTCCGATTTGCCGAAC
TCATCTCCAATGCGTCTCGAACTGTTTTACAGGTCAGAGACGCATAGAGG
GGGGGGGGTGATGTGGAGAGCACGTTCCTGACGTTCCTGGGATTCCTGAA
CCCCGGCCCCCTGCACATTGACCAATGGTATTTTGTTCCTTTCTCGGAAG
AGTTTTCTAGCTGTGTCCGACCCTGGATGGGCGGTCCATCTACGAAAACA
AAACCCAAGCGCTTGCTCCGCACTACATCCCAAGACCTAGAACCGACCCT
CATAGAGCAGATGATGTCCCCTCGAGAGCCAGTCTCTCCCGGGAGCACCG
TGCTTTCATTTCTTCCCTTCAAAAAAAAGAGTGCCATTTTTTTCCTTTTG
TTCGCTTGTTCAACTTCGTCTATGATTCATCCAACCAAGGGCAATCACTT
TCGACCCCGACGGGCAGCGTATGTATTGCGCAAGCCCGTCGGGCCTGAAG
CGATGGAGCTGGGACAACGATACTGCCGTCACTAAGTTGGAGGCCCTGGG
TGATGTCGCCTGGGGCAAAGTCGGGGCGGGTGCGCTTCACTACAACGCGG
ACGGGAGACAAGTGAGTTTGTTATATATATATATATATATATATATATAT
CGCAGCAAGGTGGGGGGGAAGGGGGGGAAATGAACAAGTCACACCCCGAA
AAAAACTTTCAGCCACCGGGATTTCCTGTTCAAAATGCTCATATAAAAAC
TCTATTGTACATATGAGGTTATGCAGCTCATTTCAATTTCTATTGTGTAG
GTACACTTGCCAGAAAATTAGATGAACAAAAAGCGTGCTCGTGTATTGCA
TGCTGTAGTTGTGAGACCGTTGGTCACGCGTCCTTGAGAGCAACGGCGGG
AAGGAATTCAATATGCCGTCCTTCTCCGCGAATTGGCCGGTCACGAGTAG
TCTGCGACATCGCACGAAACTCATATTGTTTTTTACCTCGGAACTATTGC
TAACATAATGCCTGGTTGCATAGTGACGGGGACAGCATGGCACGTGGACC
CTTATTCCATGGTGTCATAATCTGCTTCCTACGGGATTTTTTTCTGAGCA
TTTCTTTCGGAATTCATGTTCTTTTGTTTCGCTTTTGGCGGGGGTTTCTT
TGCTTGATCTCATAAATGAATGTCTCGGCATTACTAGGGATGCGAGGTCA
ACGGTGGCGACAAAATAGCATACGTTTTCATAAATTCCCCCCCCGCACCC
CCCCGCGTGGGAGGACGCGGAATATTCCAACACCCTTTCACAGTACACCC
CGTGAAAATGTTATAAGTGCAAATACATTGCATTTGTTTTCGTCGGCCAG
GCTGTATCTACTGTAGGGTGATCTTATACTAACCACCACAGTAGTCATCA
CCCTTACGTTGCTGCCGCAACCGTATTGTGCCTTGGGGGTTTCGGGCATC
TTGGGTAAGCAAACGTTGCACAATCGGCAGGGGTGACAATATATATCCCC
AGTACCACAGGAGACTTTGGTCCTCGCGCGCACGTGTAAGCAACGTCGCG
CCACACATAGCGTACATGTCGCTTCGTGTGTGACACACTCAGAGTATAAT
TTACTCATATACTCCTGATGGAAGTACAGTCATCAGCATTTCTGCTCTAG
GGCATTAGAACGACGAGTTCGGCAGACATACTAAAGAGTGTAACTCTTAG
AACGAGGCCAACAAGCTCACAGGATACAATACACCGCATTAACACCCCCC
ATGCCCTATATAGAGCATTTTTATAGTTCTATGCCACAAGAGCCGACCTT
AAGGCGGGGACGTGATATCGTCGAGTCCCCTTTCTTGTGACTGGGCGTAG
TGACGCTGCTATGTTCCTCGCGTTGTGTCATAGTCCCCGTGTCCTGCATT
CGTCGTGCTAGCTTCTGAGTCTATGTGACGAACGTAGTACGCTGCACACG
ATGTCCTGCGTACCTTAGTTAGCTGATGAAACCCAGGACAGGTTTGGATG
GGCTTGCGCCACAAGCCCTGTGCAGGGGGCTAGTGCGCGAAGTGGTGACG
GCTGAACTATGGTGATATGAGACCACTACCATCTAAGACCACCACCACCA
CCATCACCACCATCAACAGCAACAGCGACAACAACAATGACAATAACAAC
ACCCGAACGACTTGCCGACAGCAGACACCGCAATCTACCATAGACATAGA
CCCACCCCCATGCTCCAACAATCTCCATCCCATTCGTCTCCATAACACTT
CGCCCCAACGCAATCGCTTAGCGGTATCTCTCCCCCCCCGCGCGCGCGCG
TTTCCCCCTCCCCACTTCCGAACATTTTCAATTCCGAAAATACCCACCAA
GCTCCTCGCCGGCGCGTGCGCCAATAACCGCGTCTCTGTATGGGCGGTCG
ACGTCGATGTGGAAACTTCTACCAGAAAACTGAATCAACAACACCCGGGT
GTGACATCAAGCTCCGCTTGCGGAACCTTCGGGGACAGCATCTCACCGGC
CCCGGGATACCCGTGCGAGTCAACAGTGGTAGCAGCAGCTGTCGCTGGGA
AGTATGGGAACGGTTCTGGGAACGGTTCTGGGAATGATGACAGCGTGAAG
GTGCGAGAACTAGGAAATGGAGTAGTGGGGGAGAAGGACTCAATGGCCTT
TCTTGTTATCAAGGCAAAATACAACGCCTTCCCGCTTTCAGTGCTCTTGG
ATTCGTTTGCTTCATATTTGCTCTCGCAAACTAGGGTCAACTCCTGTGTG
CGTGAATTTTTGGTGAAACTATTTAGGTAGGATGTTTGCGCAAAACGAGT
TCCTTTTGCGAGGTTTGATTTGATTGCGTATAGCGAACACTGAGCTGGTC
GTCGCAGACACCCTCTGGACCCTAGGTCACGCACGCCAACGTTTTTTACA
AAAGGAAGTTTTTTTCAAAATTCGTACATTCCACGAGAGATAAGAATAGT
CATCACTGCCTGTGACAAGGATTTCGTTTCGTAACGAGATGTTGATGTAG
GTGGACTGAGGTCTGGGACGAGGGGTTCACTGTTGACTATACACATGACC
AAATGAAATTTTCAAAAGGAATTCATTTTGTGCAGACGCTCCATTTATCG
ACAGGGATGTTTTGCTTCAACTCATTATTTAGTTGCATCCTCATCTATAC
CCCTTTGGACCTCTGTTTCTCCCTTTACAGTAGCGAGTAAGCATATGTGT
TTTAGGTATTTGACTTTTGATGTGCATGGTGTTGTTGTTGTTCTGTGTGT
CTGCGTGTGTGTGTACGTATGTTTTAGCTTCGTTGTGTCTTGTGGTGTTG
TGCTCCCTCTTTGTTTCGAAACGCATTTGGCCCACGCCCGGACACGTCGA
CCGATGAACGCAGGCAGCGTCAAGATCCGATGGGGACTCCATGAGCAGGG
AACAAACATGCCATGGGGACGGCCCAGAGTTGGTATGGAAAGAGGAAAAA
AAGGAGAGCGTAGCTGCCCCTAACGGACTGGCGGGGTTTCAGGCAAGCTT
TGGCTATAGATTCGAGTAGCTTTTCGTGTTCCATCTAAGGAATCATGCTG
TTTTCAATTTTTTTCGGAGCTACCCATGCGCCTCTCCATCCGTCGCCGCC
ACTCTTGGAGGCGGGGGCTGCATTTTAGGGCGGCGGCGGTGCACTAAGCG
TTCAGTGAATTTTCGTCTTTTCACCTTCGTTTTATTGCACACGCTACTCC
AATGTGAATATGTGTTCTTGGTTTCGATAAGGAGCGTGGTGGCGACCAGT
TCAGCAAGGAGGAACCCTGGCGGATACAACGGCCGGTTCGAGCGGTATTG
TTCGTTTGTTTTCGTCCCCTTGGCAGCCACGCACAATAGCAAAACTTGAA
GGAACCACAATTTTTGTACGCCAGGGGGCCCGCAGGGTCCACACTGTTGA
ACCGCACCCTCCCTCGAACCTCCCGAGCCCCCTTTGTGATCAAGTAAAAC
ACTTTGGGGGAAAAATGCATTTCGCTAATTTCCGATGCAGATTCCAAATC
TGGAACAAGATATTTTTAATTCAAACGCTAGGGGTGTACATGTGTACATT
TATTTTATACTACGTTCTTTTGAGTGGTCAATTAAAAAATCAAAGCATCA
TTTCTCTTTTCACCAACATCGTGTTTACTTACGGTGCACGACTAGACTGC
CTTTGATGCTACACCGCGCACCCTCCCCTTTCCTATTTCGACAAACAGTT
GCGCGGCCGCCATCTTTCTCCTTCCCTCATCGCCGATGCGAAAACCTCAT
CGTCGTCGTCGTCATCATCACCGCCGTTGGCACCGCTTTTAACAACCGCA
GCCAACGTCCACCCTCGTACCCCCCCCGCCTCCATCACTACCGCCACCAC
CACCGGTACCATCACTCCCGCCGCCGGCGCTGCCACGGCCCACGGGACCC
CCTGTTATTCCTCCTCTTCTTCTCGACGACCCGCTCAACAAAATCGAGCG
GCCGCTATAGCCGCCACCGTCGCGGCGGTCGCCTCTGCCAAGGCAGCCAC
CGACGACGCTGTCGCCGCCGTCTCCAGCTCCAACTCCGGCCGTTACCGTA
GCGTCGGCACCTCTGTCTCGGACACTCTGGTTTTGGGCTCGTTGGCCCCC
GATACCGCCGGCAGCAATAATCTTCGTGACGGCGGCCGCGGTCGGGGGGG
TGGCTGTGATACTGCCGGAGGTTGTGGGGGCAGTGCCGGCGATGGGAATA
AAAATGGGAGTGCTGGCAGCGCCGCAGCGCGGTTTGGATCTGGCGGGAAC
GACTTGGTGGGAGCCGGCGGCGGCGGCGGCGGCGCAGGAACTGAAGCAGG
GATGCGGCCGGGGTCTGTCTTGAAGGGAAGAAGAGACCCTCGAACGGCGG
GTGGCGAAGGAGCACGATCTTGTTGGCCCGAAGGAGAAGTTGTGGCCCCT
GGGAAACATGACCACTATGCGGAAAGGGGGCAGGACGAGGGTCGACTGCG
CGAGCGGGGGGGCGACCGCGACAAGTTGTACAAGTTAGAGGTAGAGTTGC
CGCCGGCTGAGAGGTATCAAGGCAGCAGCAATGCGCTTGTTGACGCGGGT
GATGGAGCCAGGCGGCGACTTGAGACCAAAGGTGGTGTCGGGGCAACACC
GGCAGTCGTTCCAACTGTAGACACACCAACCGCACCAGCAAATAAGACCC
CTTGGCACATCCCCCCGGAAGTGTTGAAGACACCCCGATGCACCGAAGTG
GTGGGCGCTGAAAGAGGAGAGGCAGCGGCTGCCACGGCTACAGGGATAGG
GGAAGACTCTCCTCCCCTCTTGGGCTCACCCTCGCCCTCACCCGCCCGGA
CCCCGAAGCAACGGCCATTATCATTATCGTCATCACCATCTCCTACCGGT
CACGCTCCAGACGGTGCTCAGAGCGAACGGAGACATGGCTTGCCTGGCCG
AACAGCTGCCCCCGCTGCCCTCGCCGCCGCCCCCGCCGCCGCCGCTGGCC
CTGGCTTGGGCTCGGTACGATTAGCACCAGGTGCGGGTGGCATTGCAAGC
TCGAGTTGTTATCCCGGAGCTACGGAAAATACCCCGGTCGCGTTGGATGC
ACGGAGCGGGAAGGGCGCTGCGGTGGGTGAGATGGGGGGTTTCGACGGGG
TAAATGTAGGTGTGAGTGGCGGCGGGCATGACGGCGGTTGCAGGGGGGGC
GATGACGGGGTTGCTGAGTCGAGTGATAGTGGGTGGGTAGCGGGAGATGG
CGAATTGGGCATGACGCGACCGAGGACGGCGACGAGGAGGTGGGATCGGC
CCGGGCCGTTGGGGGATGACGAGGTGATCGCTAAGACCTTGCTCTCGCGC
TCGGCGACGACGTCGACGCTCTCGAATCGGTGAGGGAGGTATGAGTGATG
TGGTGACCGATGTGACTAAATTACTAGTGTACACTTTTTGGCACGCCACG
AAAATGTTTTTTGATTGACTATCAGAGAGTGAGAGATGTATGCGGTGTGA
GTGTGCTTTGGAAAACAAATAGCACATCTGTGAATGATCAGGTTGGGTTG
GGAAAGCTCAATTCTCTTCTTTAGGTACAGAGGGATAGTTCCGCACCCCG
GCCCATGAGATGAAATTGCGGTTACTCCCACGACGACAAAACTCTTGCCA
ACATTGGCCAGCACTCAACCAATCAAGCAGAACGTACTTGGATTCAAACC
CTCCTAGAACGCGTAGTGCACCCCGCGCTCGTCAATCCGGTTCCACGGGT
AAAGAAAGCGACCGACCGTGAATCAAGCTCATCCAAGTTCTATTCCCCCC
GGCTTGCGCGTGACCTGAGAAGGCAAGAGTTGATGCACACAGGATAGGGA
AGCCTTTTTGAGCCACCTTTGGCAAGTTGGGGAGGAGAGATTGGCAATCG
TTGTCATGGGAATAATGCTCCGTCCTGTCGAGGACGCGTGGTCAAGGATT
AGACCGTTATGTCATACAACCCATGAGTAATCCCCCAGCCCCTAGTTTGG
TTAGTTTGTCGATAAGTAATCCGGTAGATTAAAGATACTGAGCATGCCTC
CATTTTGCTTCATGGTTATGGTAATATTTGTTACAGCACATCGTTTATCT
TCTATGTTTGACGCCCCACACCCGATCCCACCTCACCCCGGCACGCACGT
GCCCGATCTATCCTCGCTTAGGTTAAACCAACTGCGCCTGCTCCGATCCG
GGTGGGCAGAAGGCGACATCTCGGGCACTATCGCAAAGTTGAAACGGTTG
GAATGTTCCGCAACGCCCGCAGACTTTTCCCCGCGCATCGTTGTATCCGA
TTTCTTGTCGGTAGTGGCCCTGGAGCAGGGCGCAGCCGTAACCCTCGAGC
ACTGCCTGGACCTTATGCCCTTGCTTGAAGACTTGTGGAAGGTAGTCCTC
TCTCTCATGTTTGTTACATCACAACGTACCGCATACTTGTAAAAATAAAA
TGGGCGTTTTTTTTGCGTGCACATTTGTGATTCCATCCTCGGTTTGTCTG
TTCGTTACGGTTGTACGTGCTGCAGGCAGGGTGCACGTAATGGTGCTATT
TGTTACCTCTCCGGCTTTACAGCACGCTCATAGCATGAACGACATCGACT
AGTGAAAGCTAGCCTTTAGAAGCTCCGTACGCACGATTTGGGAGTCCACC
CCCCCACCCCCTCTCCCCTCACCCTGTGAACACAATTCTTCGTAAGCGAT
ACCCCCGTCCCCTGCTTGGTATTAGGTTGTAACTACTTACCGCTGCTCCG
TACTTCTGTCTCCCCCTCAAATGGACTGACCCCAACCTCAGCTTGATGTA
GAAAATTCCGTCGCTGCGGGAACCCGGTGTCTAGAGTCCGTTGTCAGGAG
GTTCGGAGGATATGTACGTGATACCCTGCGCGCGCCGGCTACGAGCGGGG
CAGGGGTTGATTTGGCGAGAGAGGAAAGAATTGATCGCTGTCGAGAGGCC
CACAGAGTGAGTGAGTGAATGAGTGAGCGAATTTGGTTGGTTGGCTTTTC
GTTTAATTTGTTTTTGTGACACTTACCGTCGGTACACGCGCGTTTCTTTA
TTTTGTGTTGGTTGTATACTTTCTTCTCGACGATGCGTAGGCATTGTGTA
GGTTTGAGTTGAGTAAGACGGCACTAGTGCTTTGGTAGATGCAAGCGCTT
AGAATCTTTTAAACGTTGTCCACAGAAGTATACACGTTATCTATATCGTA
GACACGAAGCATCACGAACGTTTTTCTCACGTTGTCCCAACATGTCCATG
AGATGCGTGCACGCACGCTGTGACAACATCGCGATAGGTAAATTGGATGC
GTTCCGGAATATCGAAGACTACTTGCCCACAGTCACAACGTTGCTCTGTT
GGGAACATTCGTAACCACCGATGAATTCGTAAGTATTGCGTGACTTGGAC
AGCTTCCTTCTCGCAGGCGCTACCGGCCACTCCTCGCGCTATTTTCTCTA
TTACGCGCGCGTCCAAGTCAATACGCGCGATCGGCGTGTGGCATTTTAGA
TATTTTTTGTGATAGATCGCAATAATCTAGATCCAGATCCAGAGTACTAA
TCCAGTACTTTAGTATCACATGGAGTATGGTACCAACGGTTCTCCTCCAC
TTGAGCTAGCCCCATGAAACAAGTCTCGCACGAACCTTTCGTCTGTTTAA
TCCGAAAGTTGTTGGAATGTATGTACCGCGTTTCAGAACGCTCGTGTAAT
TTGGCTCTGTCACAGCCCAACTTCCACCCTTGGCGTGCATCGACTTCCCG
CATACCAACAACAGGCTTTTGTTCGCGGATACCATCAGCTAGAGCGCACC
GAGCGGGAGTTCTACGAAGATAGACGTATAGCGTCAGTCGCTGCGCGATT
ACGTCCACTGTTCGAGACCTACTTCATCTCATGACTTTGTTTTTGTTCGG
TGATGAGAAATGGAATATAAGAAACTTTTGACGTGATGATTGGAAAGTCG
ATAGAATCGACCGCCGCTCGGTTGAGATTCGGTCATACAGAACCGACCGT
GAACCGGTTGTGTTTAGAATACAAGAATTAAGAATATGGCTAGAGAACCC
TGCAGCCGCGAACGGCCGGTTATTCTGGTTGTGGTCGTGTACAAGTTATT
GTCAGTCATCTGAAAAGGCCTCGAAAACAACTTGGTATCATCTGGCCTTG
TTTGCCGCCCGTCCTGTTCGTTACATCGAGTGGGATGGATTGATTGATAA
CCACAACGCATGAGGCGTTCATATCTGCTGATGAAAGAGACGAGGTCGGA
GGCGCGTGTCATGTCTTTGCTGGGGTGATCGAGTGAGTGTACTAAATCCT
CATGACTTAGTACCGTAGAGTCACGGCTATGCCCGCTGTGCAGTTTGTGC
TTGTCCCCGACCCACCGAGTCGCTGCGCTCGCGTGAACACAAAGATTCGT
GGAGAATGTGGGCCCAACCGACGGCTACGACAGTGACCACTTTACTGTAT
TGAATGATGTGGATAAGGTAGTCATCGCCGCCCTTTCAGTAATCTCTAAA
ACTCCAATCTTCGTGCGAGCGCAGCGAGCTGCTGCGAGCTGCTACCAACG
CAGCCAGTCTTTCGACGTTGGGCCGAGGACAACCTCCGGATGCACAAGTG
TCCTCGTCGCTGTCATACTAACTGAAAATAAACTACTTCGATGTATGATG
GTTAGTGATCGCACATGGTGTGTGGAAAAATGTATCCGTGTCCATATCCA
TTTACATATGCCCGAATCAAGTTTATTCTCCTTGAACACTTACTTACTCC
CCTGTTGACCCTCTGCTGCCTTTCTCTAGTAAATCACGTGCAACGTTTTG
AATTCCGTCGTGGCTAGAAGGCTAGAGACACCTGAAAACCAGACCAACAT
AATTTTTGAATAGTAGTACAACATAATGCTGACTTGGTTACACATGGATA
TGGGTGCGCCTATCTACTAAAATATTACCC back to topCoding sequence (CDS) from alignment at H-paniculata_contig1848:4778..18107- >mRNA_H-paniculata_contig1848.4548.1 ID=mRNA_H-paniculata_contig1848.4548.1|Name=mRNA_H-paniculata_contig1848.4548.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5310bp|location=Sequence derived from alignment at H-paniculata_contig1848:4778..18107- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTATTGCGCAAGCCCGTCGGGCCTGAAGCGATGGAGCTGGGACAACGA
TACTGCCGTCACTAAGTTGGAGGCCCTGGGTGATGTCGCCTGGGGCAAAG
TCGGGGCGGGTGCGCTTCACTACAACGCGGACGGGAGACAAATGTATTGC
GCAAGCCCGTCGGGCCTGAAGCGATGGAGCTGGGACAACGATACTGCCGT
CACTAAGTTGGAGGCCCTGGGTGATGTCGCCTGGGGCAAAGTCGGGGCGG
GTGCGCTTCACTACAACGCGGACGGGAGACAACTCCTCGCCGGCGCGTGC
GCCAATAACCGCGTCTCTGTATGGGCGGTCGACGTCGATGTGGAAACTTC
TACCAGAAAACTGAATCAACAACACCCGGGTGTGACATCAAGCTCCGCTT
GCGGAACCTTCGGGGACAGCATCTCACCGGCCCCGGGATACCCGTGCGAG
TCAACAGTGGTAGCAGCAGCTGTCGCTGGGAAGTATGGGAACGGTTCTGG
GAACGGTTCTGGGAATGATGACAGCGTGAAGCTCCTCGCCGGCGCGTGCG
CCAATAACCGCGTCTCTGTATGGGCGGTCGACGTCGATGTGGAAACTTCT
ACCAGAAAACTGAATCAACAACACCCGGGTGTGACATCAAGCTCCGCTTG
CGGAACCTTCGGGGACAGCATCTCACCGGCCCCGGGATACCCGTGCGAGT
CAACAGTGGTAGCAGCAGCTGTCGCTGGGAAGTATGGGAACGGTTCTGGG
AACGGTTCTGGGAATGATGACAGCGTGAAGGCAGCGTCAAGATCCGATGG
GGACTCCATGAGCAGGGAACAAACATGCCATGGGGACGGCCCAGAGTTGG
TATGGAAAGAGGAAAAAAAGGAGAGCGTAGCTGCCCCTAACGGACTGGCG
GGGTTTCAGGCAGCGTCAAGATCCGATGGGGACTCCATGAGCAGGGAACA
AACATGCCATGGGGACGGCCCAGAGTTGGTATGGAAAGAGGAAAAAAAGG
AGAGCGTAGCTGCCCCTAACGGACTGGCGGGGTTTCAGTTGCGCGGCCGC
CATCTTTCTCCTTCCCTCATCGCCGATGCGAAAACCTCATCGTCGTCGTC
GTCATCATCACCGCCGTTGGCACCGCTTTTAACAACCGCAGCCAACGTCC
ACCCTCGTACCCCCCCCGCCTCCATCACTACCGCCACCACCACCGGTACC
ATCACTCCCGCCGCCGGCGCTGCCACGGCCCACGGGACCCCCTGTTATTC
CTCCTCTTCTTCTCGACGACCCGCTCAACAAAATCGAGCGGCCGCTATAG
CCGCCACCGTCGCGGCGGTCGCCTCTGCCAAGGCAGCCACCGACGACGCT
GTCGCCGCCGTCTCCAGCTCCAACTCCGGCCGTTACCGTAGCGTCGGCAC
CTCTGTCTCGGACACTCTGGTTTTGGGCTCGTTGGCCCCCGATACCGCCG
GCAGCAATAATCTTCGTGACGGCGGCCGCGGTCGGGGGGGTGGCTGTGAT
ACTGCCGGAGGTTGTGGGGGCAGTGCCGGCGATGGGAATAAAAATGGGAG
TGCTGGCAGCGCCGCAGCGCGGTTTGGATCTGGCGGGAACGACTTGGTGG
GAGCCGGCGGCGGCGGCGGCGGCGCAGGAACTGAAGCAGGGATGCGGCCG
GGGTCTGTCTTGAAGGGAAGAAGAGACCCTCGAACGGCGGGTGGCGAAGG
AGCACGATCTTGTTGGCCCGAAGGAGAAGTTGTGGCCCCTGGGAAACATG
ACCACTATGCGGAAAGGGGGCAGGACGAGGGTCGACTGCGCGAGCGGGGG
GGCGACCGCGACAAGTTGTACAAGTTAGAGGTAGAGTTGCCGCCGGCTGA
GAGGTATCAAGGCAGCAGCAATGCGCTTGTTGACGCGGGTGATGGAGCCA
GGCGGCGACTTGAGACCAAAGGTGGTGTCGGGGCAACACCGGCAGTCGTT
CCAACTGTAGACACACCAACCGCACCAGCAAATAAGACCCCTTGGCACAT
CCCCCCGGAAGTGTTGAAGACACCCCGATGCACCGAAGTGGTGGGCGCTG
AAAGAGGAGAGGCAGCGGCTGCCACGGCTACAGGGATAGGGGAAGACTCT
CCTCCCCTCTTGGGCTCACCCTCGCCCTCACCCGCCCGGACCCCGAAGCA
ACGGCCATTATCATTATCGTCATCACCATCTCCTACCGGTCACGCTCCAG
ACGGTGCTCAGAGCGAACGGAGACATGGCTTGCCTGGCCGAACAGCTGCC
CCCGCTGCCCTCGCCGCCGCCCCCGCCGCCGCCGCTGGCCCTGGCTTGGG
CTCGGTACGATTAGCACCAGGTGCGGGTGGCATTGCAAGCTCGAGTTGTT
ATCCCGGAGCTACGGAAAATACCCCGGTCGCGTTGGATGCACGGAGCGGG
AAGGGCGCTGCGGTGGGTGAGATGGGGGGTTTCGACGGGGTAAATGTAGG
TGTGAGTGGCGGCGGGCATGACGGCGGTTGCAGGGGGGGCGATGACGGGG
TTGCTGAGTCGAGTGATAGTGGGTGGGTAGCGGGAGATGGCGAATTGGGC
ATGACGCGACCGAGGACGGCGACGAGGAGGTGGGATCGGCCCGGGCCGTT
GGGGGATGACGAGGTGATCGCTAAGACCTTGCTCTCGCGCTCGGCGACGA
CGTCGACGCTCTCGAATCGTTGCGCGGCCGCCATCTTTCTCCTTCCCTCA
TCGCCGATGCGAAAACCTCATCGTCGTCGTCGTCATCATCACCGCCGTTG
GCACCGCTTTTAACAACCGCAGCCAACGTCCACCCTCGTACCCCCCCCGC
CTCCATCACTACCGCCACCACCACCGGTACCATCACTCCCGCCGCCGGCG
CTGCCACGGCCCACGGGACCCCCTGTTATTCCTCCTCTTCTTCTCGACGA
CCCGCTCAACAAAATCGAGCGGCCGCTATAGCCGCCACCGTCGCGGCGGT
CGCCTCTGCCAAGGCAGCCACCGACGACGCTGTCGCCGCCGTCTCCAGCT
CCAACTCCGGCCGTTACCGTAGCGTCGGCACCTCTGTCTCGGACACTCTG
GTTTTGGGCTCGTTGGCCCCCGATACCGCCGGCAGCAATAATCTTCGTGA
CGGCGGCCGCGGTCGGGGGGGTGGCTGTGATACTGCCGGAGGTTGTGGGG
GCAGTGCCGGCGATGGGAATAAAAATGGGAGTGCTGGCAGCGCCGCAGCG
CGGTTTGGATCTGGCGGGAACGACTTGGTGGGAGCCGGCGGCGGCGGCGG
CGGCGCAGGAACTGAAGCAGGGATGCGGCCGGGGTCTGTCTTGAAGGGAA
GAAGAGACCCTCGAACGGCGGGTGGCGAAGGAGCACGATCTTGTTGGCCC
GAAGGAGAAGTTGTGGCCCCTGGGAAACATGACCACTATGCGGAAAGGGG
GCAGGACGAGGGTCGACTGCGCGAGCGGGGGGGCGACCGCGACAAGTTGT
ACAAGTTAGAGGTAGAGTTGCCGCCGGCTGAGAGGTATCAAGGCAGCAGC
AATGCGCTTGTTGACGCGGGTGATGGAGCCAGGCGGCGACTTGAGACCAA
AGGTGGTGTCGGGGCAACACCGGCAGTCGTTCCAACTGTAGACACACCAA
CCGCACCAGCAAATAAGACCCCTTGGCACATCCCCCCGGAAGTGTTGAAG
ACACCCCGATGCACCGAAGTGGTGGGCGCTGAAAGAGGAGAGGCAGCGGC
TGCCACGGCTACAGGGATAGGGGAAGACTCTCCTCCCCTCTTGGGCTCAC
CCTCGCCCTCACCCGCCCGGACCCCGAAGCAACGGCCATTATCATTATCG
TCATCACCATCTCCTACCGGTCACGCTCCAGACGGTGCTCAGAGCGAACG
GAGACATGGCTTGCCTGGCCGAACAGCTGCCCCCGCTGCCCTCGCCGCCG
CCCCCGCCGCCGCCGCTGGCCCTGGCTTGGGCTCGGTACGATTAGCACCA
GGTGCGGGTGGCATTGCAAGCTCGAGTTGTTATCCCGGAGCTACGGAAAA
TACCCCGGTCGCGTTGGATGCACGGAGCGGGAAGGGCGCTGCGGTGGGTG
AGATGGGGGGTTTCGACGGGGTAAATGTAGGTGTGAGTGGCGGCGGGCAT
GACGGCGGTTGCAGGGGGGGCGATGACGGGGTTGCTGAGTCGAGTGATAG
TGGGTGGGTAGCGGGAGATGGCGAATTGGGCATGACGCGACCGAGGACGG
CGACGAGGAGGTGGGATCGGCCCGGGCCGTTGGGGGATGACGAGGTGATC
GCTAAGACCTTGCTCTCGCGCTCGGCGACGACGTCGACGCTCTCGAATCG
GTTAAACCAACTGCGCCTGCTCCGATCCGGGTGGGCAGAAGGCGACATCT
CGGGCACTATCGCAAAGTTGAAACGGTTGGAATGTTCCGCAACGCCCGCA
GACTTTTCCCCGCGCATCGTTGTATCCGATTTCTTGTCGGTAGTGGCCCT
GGAGCAGGGCGCAGCCGTAACCCTCGAGCACTGCCTGGACCTTATGCCCT
TGCTTGAAGACTTGTGGAAGGTTAAACCAACTGCGCCTGCTCCGATCCGG
GTGGGCAGAAGGCGACATCTCGGGCACTATCGCAAAGTTGAAACGGTTGG
AATGTTCCGCAACGCCCGCAGACTTTTCCCCGCGCATCGTTGTATCCGAT
TTCTTGTCGGTAGTGGCCCTGGAGCAGGGCGCAGCCGTAACCCTCGAGCA
CTGCCTGGACCTTATGCCCTTGCTTGAAGACTTGTGGAAGCTTGATGTAG
AAAATTCCGTCGCTGCGGGAACCCGGTGTCTAGAGTCCGTTGTCAGGAGG
TTCGGAGGATATGTACGTGATACCCTGCGCGCGCCGGCTACGAGCGGGGC
AGGGGTTGATTTGGCGAGAGAGGAAAGAATTGATCGCTGTCGAGAGGCCC
ACAGACTTGATGTAGAAAATTCCGTCGCTGCGGGAACCCGGTGTCTAGAG
TCCGTTGTCAGGAGGTTCGGAGGATATGTACGTGATACCCTGCGCGCGCC
GGCTACGAGCGGGGCAGGGGTTGATTTGGCGAGAGAGGAAAGAATTGATC
GCTGTCGAGAGGCCCACAGAGCTTTTGTTCGCGGATACCATCAGCTAGAG
CGCACCGAGCGGGAGTTCTACGAAGATAGACGTATAGCGTCAGTCGCTGC
GCGATTACGTCCACTGTTCGAGACCTACTTCATCTCATGAGCTTTTGTTC
GCGGATACCATCAGCTAGAGCGCACCGAGCGGGAGTTCTACGAAGATAGA
CGTATAGCGTCAGTCGCTGCGCGATTACGTCCACTGTTCGAGACCTACTT
CATCTCATGA back to top
|