mRNA_H-paniculata_contig18293.4474.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig18293.4474.1 vs. uniprot
Match: D8LCT9_ECTSI (JmjC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCT9_ECTSI) HSP 1 Score: 197 bits (502), Expect = 6.990e-60 Identity = 86/108 (79.63%), Postives = 97/108 (89.81%), Query Frame = 1
Query: 1 SHFWMGLLEGKKRWLLYPKQQAPLLYPLWPEGCHDPVFEADLKEPDGNKHPAALLASGYECVLEEGDLLFVPAGCPHRVENITDTIALSCNYVDATNVEGALAALEDQ 324
SHFWM LLEGKKRWLLYPK++APLLYP+WPEGCHDPVFEADL PD + PAALLA G+ CVLE GDLLFVPAGCPHRVEN+T T+ALSCNYVDATN++ +LAAL+DQ
Sbjct: 248 SHFWMALLEGKKRWLLYPKEEAPLLYPIWPEGCHDPVFEADLDNPDATRTPAALLAKGFSCVLEAGDLLFVPAGCPHRVENLTGTLALSCNYVDATNIDMSLAALQDQ 355
BLAST of mRNA_H-paniculata_contig18293.4474.1 vs. uniprot
Match: A0A835ZEW7_9STRA (JmjC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEW7_9STRA) HSP 1 Score: 137 bits (344), Expect = 2.440e-38 Identity = 62/103 (60.19%), Postives = 76/103 (73.79%), Query Frame = 1
Query: 13 MGLLEGKKRWLLYPKQQAPLLYPLWPEGCHDPVFEADLKEPDGNKHPAALLASGYECVLEEGDLLFVPAGCPHRVENITD--TIALSCNYVDATNVEGALAAL 315
M LL G+KRW L+P+ Q LLYP+W EG HDP FE DLK PD KHPAA +G++C +E GDLLFVP+GCPH VEN +A+SCNYVD++N+E AL AL
Sbjct: 1 MALLAGRKRWTLFPRDQLALLYPVWREGTHDPSFEVDLKLPDYRKHPAAAALTGWQCAMEAGDLLFVPSGCPHEVENEGPGPVVAVSCNYVDSSNLERALEAL 103
BLAST of mRNA_H-paniculata_contig18293.4474.1 vs. uniprot
Match: A0A485LIU5_9STRA (Aste57867_21686 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIU5_9STRA) HSP 1 Score: 122 bits (307), Expect = 1.220e-30 Identity = 62/111 (55.86%), Postives = 74/111 (66.67%), Query Frame = 1
Query: 1 SHFWMGLLEGKKRWLLYPKQQAPLLYPLWPEGCHDPVFEADLKEPDGN-KHPAALL--ASGYECVLEEGDLLFVPAGCPHRVENITDTIALSCNYVDATNVEGALAALEDQ 324
S+FWM L+EG+KRW L LLYP W G D VF D+ + D + +H AL A YEC+LE GD+LFVPAG PH VEN+TDT ALSCNY+DA+N A AALE Q
Sbjct: 292 SNFWMALMEGRKRWRLIHPDDVHLLYPTWHVGTPDIVFAVDMTQDDASSRHQHALFQYARVYECILEAGDILFVPAGAPHYVENLTDTTALSCNYIDASNWARAQAALECQ 402
BLAST of mRNA_H-paniculata_contig18293.4474.1 vs. uniprot
Match: A0A8B8CFB3_CRAVI (F-box protein At1g78280-like n=2 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8CFB3_CRAVI) HSP 1 Score: 121 bits (304), Expect = 4.270e-30 Identity = 54/106 (50.94%), Postives = 71/106 (66.98%), Query Frame = 1
Query: 1 SHFWMGLLEGKKRWLLYPKQQAPLLYPLWPEGCHDPVFEADLKEPDGNKHPAALLASGYECVLEEGDLLFVPAGCPHRVENITDTIALSCNYVDATNVEGALAALE 318
S+FWM + +G KRW+ +P P LYP +P DP+FEADL P+ K P L EC+L EG++LFVPAGCPHRVEN+T ++A+S N+VD +N E L LE
Sbjct: 360 SNFWMAVFKGSKRWVFFPPSDMPYLYPQFPNSM-DPIFEADLTSPNLEKQPLLHLTHPTECILTEGEVLFVPAGCPHRVENMTSSVAISANFVDLSNWENVLRELE 464
BLAST of mRNA_H-paniculata_contig18293.4474.1 vs. uniprot
Match: A0A024US26_9STRA (JmjC domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024US26_9STRA) HSP 1 Score: 119 bits (299), Expect = 5.280e-30 Identity = 59/109 (54.13%), Postives = 72/109 (66.06%), Query Frame = 1
Query: 1 SHFWMGLLEGKKRWLLYPKQQAPLLYPLWPEGCHDPVFEADLKEPDGN-KHPAALLASGYECVLEEGDLLFVPAGCPHRVENITDTIALSCNYVDATNVEGALAALEDQ 324
S+FWM LLEG+KRW L LLYP W G D VF DL P+G+ +H A ++CVLEEGD+LFVPAG PH V+N+T T+A+SCNY+DATN A AL Q
Sbjct: 188 SNFWMALLEGRKRWCLVHPDDMHLLYPEWHAGSPDVVFGVDLARPEGSPEHALFRHARVWDCVLEEGDVLFVPAGTPHFVQNLTQTVAVSCNYIDATNWVRASTALAHQ 296
BLAST of mRNA_H-paniculata_contig18293.4474.1 vs. uniprot
Match: K1R795_CRAGI (Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6-B n=2 Tax=Crassostrea gigas TaxID=29159 RepID=K1R795_CRAGI) HSP 1 Score: 121 bits (303), Expect = 8.230e-30 Identity = 52/106 (49.06%), Postives = 72/106 (67.92%), Query Frame = 1
Query: 1 SHFWMGLLEGKKRWLLYPKQQAPLLYPLWPEGCHDPVFEADLKEPDGNKHPAALLASGYECVLEEGDLLFVPAGCPHRVENITDTIALSCNYVDATNVEGALAALE 318
S+FWM + +G KRW+ +P+ P LYP +P DPVFEAD++ P+ P L EC+L EG++LFVPAGCPHRVEN+T ++A+S N+VD +N + L LE
Sbjct: 397 SNFWMAVFQGSKRWVFFPQSDLPYLYPQYPNSM-DPVFEADIRNPNLENQPLLHLTHPSECILSEGEVLFVPAGCPHRVENLTKSVAISANFVDLSNWDNVLEELE 501
BLAST of mRNA_H-paniculata_contig18293.4474.1 vs. uniprot
Match: A0A6G0XJY5_9STRA (JmjC domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJY5_9STRA) HSP 1 Score: 120 bits (301), Expect = 8.480e-30 Identity = 58/108 (53.70%), Postives = 70/108 (64.81%), Query Frame = 1
Query: 1 SHFWMGLLEGKKRWLLYPKQQAPLLYPLWPEGCHDPVFEADLKEPDGNKHPAALLASGYECVLEEGDLLFVPAGCPHRVENITDTIALSCNYVDATNVEGALAALEDQ 324
S+FWM L+EG+KRWLL LLYP W G D VF DL PD + P A EC++E GD+LFVPAG PH VENITDT+A+S NY+D++N A ALE Q
Sbjct: 294 SNFWMALMEGRKRWLLVHPDDVHLLYPHWHPGSPDLVFSVDLARPDHSLFPLHKYARVSECIMEAGDILFVPAGTPHYVENITDTVAVSSNYIDSSNWPLAREALEQQ 401
BLAST of mRNA_H-paniculata_contig18293.4474.1 vs. uniprot
Match: A0A6J8EX94_MYTCO (JMJD6 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8EX94_MYTCO) HSP 1 Score: 119 bits (299), Expect = 2.410e-29 Identity = 56/112 (50.00%), Postives = 77/112 (68.75%), Query Frame = 1
Query: 1 SHFWMGLLEGKKRWLLYPKQQAPLLYPLWPEGCHDPVFEADLKEPDGNKHPAALLASGYECVLEEGDLLFVPAGCPHRVENITDTIALSCNYVDATNVEGALAALEDQVSAL 336
S+FWM L +GKKRW+ +P+ P LYP + E DPVF DL +PD ++P L + ECVLE GD+LFVPAGCPHRVEN+ ++A+S N+VD +N+ L E +++AL
Sbjct: 377 SNFWMALFQGKKRWVFFPQSDVPYLYPEY-EHSLDPVFAVDLSKPDLTRYPLLQLTTPMECVLEPGDVLFVPAGCPHRVENLETSVAISSNFVDQSNLN--LVRQELKINAL 485
BLAST of mRNA_H-paniculata_contig18293.4474.1 vs. uniprot
Match: A0A8B6GCN7_MYTGA (JmjC domain-containing protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6GCN7_MYTGA) HSP 1 Score: 118 bits (295), Expect = 8.180e-29 Identity = 56/112 (50.00%), Postives = 75/112 (66.96%), Query Frame = 1
Query: 1 SHFWMGLLEGKKRWLLYPKQQAPLLYPLWPEGCHDPVFEADLKEPDGNKHPAALLASGYECVLEEGDLLFVPAGCPHRVENITDTIALSCNYVDATNVEGALAALEDQVSAL 336
S+FWM L +GKKRW+ +P+ P LYP + E DPVF DL PD ++P L + ECVLE GD+LFVPAGCPHRVEN+ ++A+S N+VD +N L E +++AL
Sbjct: 375 SNFWMALFQGKKRWVFFPQSDVPYLYPEY-EHSLDPVFAVDLSRPDLTQYPLLQLTTPIECVLEPGDVLFVPAGCPHRVENLETSVAISSNFVDQSNF--TLVKQELKINAL 483
BLAST of mRNA_H-paniculata_contig18293.4474.1 vs. uniprot
Match: UPI0009E4E5F3 (bifunctional arginine demethylase and lysyl-hydroxylase JMJD6-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E4E5F3) HSP 1 Score: 118 bits (295), Expect = 8.710e-29 Identity = 53/106 (50.00%), Postives = 73/106 (68.87%), Query Frame = 1
Query: 1 SHFWMGLLEGKKRWLLYPKQQAPLLYPLWPEGCHDPVFEADLKEPDGNKHPAALLASGYECVLEEGDLLFVPAGCPHRVENITDTIALSCNYVDATNVEGALAALE 318
S+FWM L +G+KRW + K++ PLLYP + E D VF+ DL PD +KHP A+ C+LE G+LLFVP GCPHRVEN+ D++A+S N+VD +N E + L+
Sbjct: 361 SNFWMALFQGRKRWTFFSKEEVPLLYPHY-EDSLDLVFDVDLSSPDFDKHPLLSRATPRRCILEPGELLFVPYGCPHRVENLEDSLAVSANFVDISNFEVVVEELK 465 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18293.4474.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig18293.4474.1 >prot_H-paniculata_contig18293.4474.1 ID=prot_H-paniculata_contig18293.4474.1|Name=mRNA_H-paniculata_contig18293.4474.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=112bp MGLLEGKKRWLLYPKQQAPLLYPLWPEGCHDPVFEADLKEPDGNKHPAALback to top mRNA from alignment at H-paniculata_contig18293:377..969+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig18293.4474.1 ID=mRNA_H-paniculata_contig18293.4474.1|Name=mRNA_H-paniculata_contig18293.4474.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=593bp|location=Sequence derived from alignment at H-paniculata_contig18293:377..969+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig18293:377..969+ >mRNA_H-paniculata_contig18293.4474.1 ID=mRNA_H-paniculata_contig18293.4474.1|Name=mRNA_H-paniculata_contig18293.4474.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=672bp|location=Sequence derived from alignment at H-paniculata_contig18293:377..969+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |