mRNA_H-paniculata_contig1785.4272.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1785.4272.1 vs. uniprot
Match: A0A6H5KWL2_9PHAE (Myosin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWL2_9PHAE) HSP 1 Score: 213 bits (542), Expect = 8.600e-68 Identity = 101/136 (74.26%), Postives = 116/136 (85.29%), Query Frame = 1
Query: 1 FMWIVVIINKSLGKGDSSLPFIGLLDIFGFENFEAKNEFEQLLINFTNESLQGTFNKQVFNNELKLYEEEGLEVTVSSRPDNTECLRLLSERPNGIIPSLDNVCAEPNPSDLRYVRSLHKMYSRHPDFPRTAPHQM 408
F+WIV +IN SLGKGD SLPF+G+LDIFGFENF+ KNEFEQLLINFTNESLQ TFNKQVF+NEL+LYEEEG++V VS+ PDN ECL +LS +P GIIPSLDN+CAEPNPSD RY+ LHK Y RH DFP+TA M
Sbjct: 15 FLWIVSVINNSLGKGDDSLPFVGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFSNELRLYEEEGIDVVVSTCPDNAECLNMLSGKPRGIIPSLDNICAEPNPSDARYLDGLHKAYLRHQDFPQTAQKNM 150
BLAST of mRNA_H-paniculata_contig1785.4272.1 vs. uniprot
Match: A0A6H5KNS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNS5_9PHAE) HSP 1 Score: 218 bits (556), Expect = 9.100e-64 Identity = 106/136 (77.94%), Postives = 117/136 (86.03%), Query Frame = 1
Query: 1 FMWIVVIINKSLGKGDSSLPFIGLLDIFGFENFEAKNEFEQLLINFTNESLQGTFNKQVFNNELKLYEEEGLEVTVSSRPDNTECLRLLSERPNGIIPSLDNVCAEPNPSDLRYVRSLHKMYSRHPDFPRTAPHQM 408
F+WIV +IN SLGKG+ SLPFIG+LDIFGFENF+ KNEFEQLLINFTNESLQ TFNKQVFNNELKLYEEEG++V VSS PDNT CL +LS+RP GIIPSLDNVCAEPN SD RY+ LHK Y+RH DFPRT P M
Sbjct: 80 FLWIVQLINTSLGKGEESLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFNNELKLYEEEGIDVVVSSCPDNTACLLMLSDRPKGIIPSLDNVCAEPNASDARYLEGLHKTYARHMDFPRTQPKDM 215
BLAST of mRNA_H-paniculata_contig1785.4272.1 vs. uniprot
Match: D7G4Q7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Q7_ECTSI) HSP 1 Score: 219 bits (558), Expect = 1.870e-63 Identity = 106/136 (77.94%), Postives = 118/136 (86.76%), Query Frame = 1
Query: 1 FMWIVVIINKSLGKGDSSLPFIGLLDIFGFENFEAKNEFEQLLINFTNESLQGTFNKQVFNNELKLYEEEGLEVTVSSRPDNTECLRLLSERPNGIIPSLDNVCAEPNPSDLRYVRSLHKMYSRHPDFPRTAPHQM 408
F+WIV +IN SLGKG+ SLPFIG+LDIFGFENF+ KNEFEQLLINFTNESLQ TFNKQVFNNELKLYEEEG++V VSS PDNT CL +LS++P GIIPSLDNVCAEPNPSD RY+ LHK Y+RH DFPRT P M
Sbjct: 429 FLWIVQLINTSLGKGEESLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFNNELKLYEEEGIDVVVSSCPDNTACLVMLSDKPKGIIPSLDNVCAEPNPSDARYLDGLHKTYARHMDFPRTQPKDM 564
BLAST of mRNA_H-paniculata_contig1785.4272.1 vs. uniprot
Match: D7FPQ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPQ0_ECTSI) HSP 1 Score: 218 bits (555), Expect = 4.720e-63 Identity = 104/136 (76.47%), Postives = 117/136 (86.03%), Query Frame = 1
Query: 1 FMWIVVIINKSLGKGDSSLPFIGLLDIFGFENFEAKNEFEQLLINFTNESLQGTFNKQVFNNELKLYEEEGLEVTVSSRPDNTECLRLLSERPNGIIPSLDNVCAEPNPSDLRYVRSLHKMYSRHPDFPRTAPHQM 408
F+WIV +IN SLGKG+ SLPFIG+LDIFGFENF+ KNEFEQLLINFTNESLQ TFNKQVFNNELKLYEEEG++V VS+ PDN EC+ +LS +P GIIPSLDNVCAEPNPSD RY+ LHK Y+RH DFPRT P M
Sbjct: 405 FLWIVSVINTSLGKGEDSLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFNNELKLYEEEGIDVVVSTCPDNAECILMLSTKPKGIIPSLDNVCAEPNPSDARYLDGLHKTYARHQDFPRTQPRDM 540
BLAST of mRNA_H-paniculata_contig1785.4272.1 vs. uniprot
Match: D8LMS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMS5_ECTSI) HSP 1 Score: 216 bits (551), Expect = 1.640e-62 Identity = 103/136 (75.74%), Postives = 116/136 (85.29%), Query Frame = 1
Query: 1 FMWIVVIINKSLGKGDSSLPFIGLLDIFGFENFEAKNEFEQLLINFTNESLQGTFNKQVFNNELKLYEEEGLEVTVSSRPDNTECLRLLSERPNGIIPSLDNVCAEPNPSDLRYVRSLHKMYSRHPDFPRTAPHQM 408
F+W+V +IN SLGKG SLPFIG+LDIFGFENF+ KNEFEQLLINFTNESLQ TFNKQVFNNELKLYE EG++V VS+ PDN ECL++LS RP GIIPSLDNVCAEPNPSD RY+ +LHK + RH DFPRT P M
Sbjct: 419 FLWVVAVINTSLGKGPDSLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFNNELKLYEAEGIDVVVSNCPDNAECLKMLSSRPKGIIPSLDNVCAEPNPSDSRYLSALHKEHERHEDFPRTKPQDM 554
BLAST of mRNA_H-paniculata_contig1785.4272.1 vs. uniprot
Match: A0A6H5JLA2_9PHAE (Myosin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLA2_9PHAE) HSP 1 Score: 208 bits (529), Expect = 5.370e-62 Identity = 100/136 (73.53%), Postives = 115/136 (84.56%), Query Frame = 1
Query: 1 FMWIVVIINKSLGKGDSSLPFIGLLDIFGFENFEAKNEFEQLLINFTNESLQGTFNKQVFNNELKLYEEEGLEVTVSSRPDNTECLRLLSERPNGIIPSLDNVCAEPNPSDLRYVRSLHKMYSRHPDFPRTAPHQM 408
F+WIV +IN SLGKG+ SLPFIG+LDIFGFENF+ KNEFEQLLINFTNESLQ TFNKQVF+NEL+LYEEEG++V VSS PDN ECL+LLS +P GIIPSLD+VC+EP P+D RY+ LHK Y RH FPRT P M
Sbjct: 344 FLWIVRVINTSLGKGEESLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFSNELRLYEEEGIDVVVSSCPDNEECLKLLSSKPKGIIPSLDSVCSEPKPTDARYLDGLHKTYVRHQHFPRTKPKDM 479
BLAST of mRNA_H-paniculata_contig1785.4272.1 vs. uniprot
Match: D8LHQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ0_ECTSI) HSP 1 Score: 211 bits (536), Expect = 1.710e-60 Identity = 100/136 (73.53%), Postives = 116/136 (85.29%), Query Frame = 1
Query: 1 FMWIVVIINKSLGKGDSSLPFIGLLDIFGFENFEAKNEFEQLLINFTNESLQGTFNKQVFNNELKLYEEEGLEVTVSSRPDNTECLRLLSERPNGIIPSLDNVCAEPNPSDLRYVRSLHKMYSRHPDFPRTAPHQM 408
F+WIV +INKSLGKGD LPFIG+LDIFGFENF+ KNEFEQLLINFTNESLQ TFNKQVF+NEL+LY+EEG++V VS+ PDN ECL +LS +P GIIPSLDN+CAEPNPSD RY+ LHK Y RH DFP+T+ M
Sbjct: 421 FLWIVSVINKSLGKGDDGLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFSNELRLYKEEGIDVVVSTCPDNAECLSMLSGKPGGIIPSLDNICAEPNPSDARYLDGLHKAYLRHQDFPQTSQKNM 556
BLAST of mRNA_H-paniculata_contig1785.4272.1 vs. uniprot
Match: A0A6H5JRA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA1_9PHAE) HSP 1 Score: 210 bits (535), Expect = 2.310e-60 Identity = 101/136 (74.26%), Postives = 114/136 (83.82%), Query Frame = 1
Query: 1 FMWIVVIINKSLGKGDSSLPFIGLLDIFGFENFEAKNEFEQLLINFTNESLQGTFNKQVFNNELKLYEEEGLEVTVSSRPDNTECLRLLSERPNGIIPSLDNVCAEPNPSDLRYVRSLHKMYSRHPDFPRTAPHQM 408
F+W+V +IN SLGKG SLPFIG+LDIFG NF+ KNEFEQLLINFTNESLQ TFNKQVFNNELKLYE EG++V VS+ PDN ECL++LS RP GIIPSLDNVCAEPNPSD RY+ +LHK + RH DFPRT P M
Sbjct: 419 FLWVVAVINTSLGKGPDSLPFIGVLDIFGALNFDTKNEFEQLLINFTNESLQDTFNKQVFNNELKLYEAEGIDVVVSNCPDNAECLKMLSSRPKGIIPSLDNVCAEPNPSDSRYLSALHKEHERHEDFPRTKPQDM 554
BLAST of mRNA_H-paniculata_contig1785.4272.1 vs. uniprot
Match: D8LMW4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW4_ECTSI) HSP 1 Score: 199 bits (505), Expect = 2.540e-56 Identity = 98/133 (73.68%), Postives = 111/133 (83.46%), Query Frame = 1
Query: 10 IVVIINKSLGKGDSSLPFIGLLDIFGFENFEAKNEFEQLLINFTNESLQGTFNKQVFNNELKLYEEEGLEVTVSSRPDNTECLRLLSERPNGIIPSLDNVCAEPNPSDLRYVRSLHKMYSRHPDFPRTAPHQM 408
IV IIN SLGKG+ SLPFIG+LDIFGFENF+ KNEFEQLLINFTNESLQ TFNKQVF+NEL+LYEEEG++V VSS PDN ECL++LS +P GIIPSLD VC+EP P+D RY+ LHK Y RH FPRT P M
Sbjct: 414 IVRIINTSLGKGEESLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFSNELRLYEEEGIDVVVSSCPDNEECLKMLSSKPKGIIPSLDCVCSEPKPTDARYLDGLHKTYVRHQHFPRTKPKDM 546
BLAST of mRNA_H-paniculata_contig1785.4272.1 vs. uniprot
Match: A0A836C7J1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7J1_9STRA) HSP 1 Score: 166 bits (420), Expect = 6.990e-45 Identity = 83/129 (64.34%), Postives = 100/129 (77.52%), Query Frame = 1
Query: 1 FMWIVVIINKSLGKGDSSLPFIGLLDIFGFENFEAKNEFEQLLINFTNESLQGTFNKQVFNNELKLYEEEGLEVTVSSRPDNTECLRLLSERPNGIIPSLDNVCAEPNPSDLRYVRSLHKMYSRHPDFP 387
F+W+V ++ SLG+G LPFIG+LDIFGFENF A+NE EQLLINFTNESLQ FNKQVF NE+ LYE+EG+EV VSS PDN+EC++LLS +PNGII LD VC EP P+D Y R LH ++R FP
Sbjct: 458 FLWVVKTVSDSLGRGAEHLPFIGVLDIFGFENF-ARNEMEQLLINFTNESLQDIFNKQVFINEIHLYEQEGIEVAVSSCPDNSECIKLLSSKPNGIITLLDAVCREPAPTDEGYTRQLHAKHARDQHFP 585 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1785.4272.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1785.4272.1 >prot_H-paniculata_contig1785.4272.1 ID=prot_H-paniculata_contig1785.4272.1|Name=mRNA_H-paniculata_contig1785.4272.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=142bp MWIVVIINKSLGKGDSSLPFIGLLDIFGFENFEAKNEFEQLLINFTNESLback to top mRNA from alignment at H-paniculata_contig1785:447..2113+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1785.4272.1 ID=mRNA_H-paniculata_contig1785.4272.1|Name=mRNA_H-paniculata_contig1785.4272.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1667bp|location=Sequence derived from alignment at H-paniculata_contig1785:447..2113+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1785:447..2113+ >mRNA_H-paniculata_contig1785.4272.1 ID=mRNA_H-paniculata_contig1785.4272.1|Name=mRNA_H-paniculata_contig1785.4272.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=852bp|location=Sequence derived from alignment at H-paniculata_contig1785:447..2113+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |