mRNA_H-paniculata_contig17646.4203.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig17646.4203.1
Unique NamemRNA_H-paniculata_contig17646.4203.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig17646.4203.1 vs. uniprot
Match: A0A6S7H8C9_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7H8C9_PARCT)

HSP 1 Score: 317 bits (813), Expect = 5.210e-92
Identity = 255/849 (30.04%), Postives = 387/849 (45.58%), Query Frame = 1
Query:    1 IKRLRSDEGGQYTGKPFRQFCAEYGIKQEFSASYTPQQNGVAERSWRSIFEMARTSIITASMGHRYWAEAVRSAVYCLNRAPTRPHNGGTPYEKWHGETPKLDHLRVFGCTTYVMFQSRQRRNLDDKAWAGVFLGYGEASPRDRVYNPENKSFQLSRNVRFDEEDF---------------VTDHRGQQEHDGTCNMEDLLLTPPVT--------PAVTRSRARGEQASMKDAEPLVEDAPSAGTAAPASRANTTKQSGMEAPRPGDQSPIRTRARAREHREKVPGHTARVAKVKGTGNLTGAVSMREPKSAAEALKGPEAETWRVAMEEEWGALMKNGTWKSENPGRLPAGRKAIRTE*IFKRKLKEDGSVARHKARLVAQRFFTSGG*RFL*NQCPRSSHVDVTYCFSPGRRA*FRIRRHGRRCGVFERPCRRKAVY*ATPPPPRVFPFLSRHT---VCAPPA*SLYGLKQSDRNRNNTLGDFLVGIGLERSITDSCLYV---SRDEGGETNLLVAVYVDDLVIWSSSIT*VSV---LG*KTWALSR------VLGIEVRCDRYNSTITISQGSYIREVLKRYGFEECRGVPTPVEGKVKISAPEGRSGNSTEYRGMVGSLMYALIGTRPDIAYAVHQAALRMEDPCREDFSTCKRIFRYLSTVLTSALRSAVRVMVTV*KDR*RRLGGRCRGPKVHNW----------------IRFQAQRWCNKLVL*EVTVCHVVQYRGRVRCCRRSRKGDGIS*ELLGSIGFGCRGSTTLFEDNKSAINLSKGSRAHCRTKHIGVRWHGIREWIREGILALKYVQTSDQLVDILTKGLSRVQFHRLRILLMWC 2385
            +K LR+D GG+Y    F ++C   GI  ++S  YTPQQNGV+ER  R++ E A++ I  A+M   +WAEAV +AVY  NR+PT   N  TPYE W  + P + +L+VFG   ++   S  RR LD ++   VF+GY   +   ++Y+ E+K+F  S++V F E  F               V + +   +H+   + ED +  P V         PAV  S    E++ MK  E L                  TK                   R R+  +K       +     T +LT      EP+S +EAL G  A  W+ A++EE+ +L+ N TW+   P   P G   I ++ + K K   DG+V RHKARLVAQ +  + G  +     P + H  +    +   +    I +   +   F        +Y + P       F+ +     VC     SLYGLKQS R  N TL  FL   G  +S  D+C+YV   + D G  + +++AVYVDD++  S+ I  ++    L  K + ++       +LG+ ++ DR   T+ ISQ  Y+  VL R+G   C+ + TP+E        E    +   Y+  +G L Y    TRPDI+ AV   +  M +P +E  +  KR+ RY+   L   L+           +     G +  G    NW                +      WC+K    + +V         V   + +++   +   LL  IG      TT++EDN+ AI  SK +R H RTKHI VR+H +RE +    + + Y  T   L DI+TKGL++  F RLR +L  C
Sbjct:  100 VKTLRTDNGGEYVSNDFSKYCVNKGIVHQYSNPYTPQQNGVSERLNRTLMESAKSMIFYANMPINFWAEAVNTAVYLHNRSPTTSLNMKTPYEVWFSKKPDVSNLKVFGSVCFIHTPSNLRRKLDPRSRKAVFIGYPLNTKGYKLYDIESKNFVRSKDVGFYENKFHDFKVVTKELIIREDVPEEKLSVDHEQHHDAEDQVPVPTVPDIEDEENLPAVGESY---EESFMKQVENL-----------------ETK-------------------RQRKAPKKFSPDECNI-----TESLT--AENEEPQSISEALNGANASKWKQALKEEYNSLISNETWELVPP---PEGCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGINYEEVFSPVARHSSIRTLLALANKHNLEIHQMDVKT-AFLNGYIEHDIYMSQPDG-----FVDQEHPEYVCKLKK-SLYGLKQSARCWNQTLDSFLTKNGYRKSNADNCIYVKSITNDNGFISFVILAVYVDDIIPISNDINMLNAEKDLLCKHFEMTDQGEIHFILGMTIKRDRETKTLFISQQKYLESVLDRFGMANCKPISTPLETTYHKRTEEEEGFDKNLYQQAIGCLTYISTATRPDISAAVSILSSYMSNPSKEHRNGVKRLLRYIKGTLNFGLKFTT-------SENDDENGDKLYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKK---QASVTKSTTEAEYVALSQATQEAIWMR-RLLSDIGCKSEEPTTMYEDNQGAIESSKNARFHNRTKHIDVRFHFVREKVLSNEVKVIYCPTEHMLADIMTKGLTKKIFQRLRSMLNVC 881          
BLAST of mRNA_H-paniculata_contig17646.4203.1 vs. uniprot
Match: A0A7D9DPP1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9DPP1_PARCT)

HSP 1 Score: 318 bits (815), Expect = 7.150e-90
Identity = 255/849 (30.04%), Postives = 384/849 (45.23%), Query Frame = 1
Query:    1 IKRLRSDEGGQYTGKPFRQFCAEYGIKQEFSASYTPQQNGVAERSWRSIFEMARTSIITASMGHRYWAEAVRSAVYCLNRAPTRPHNGGTPYEKWHGETPKLDHLRVFGCTTYVMFQSRQRRNLDDKAWAGVFLGYGEASPRDRVYNPENKSFQLSRNVRFDEEDF---------------VTDHRGQQEHDGTCNMEDLLLTPPVT--------PAVTRSRARGEQASMKDAEPLVEDAPSAGTAAPASRANTTKQSGMEAPRPGDQSPIRTRARAREHREKVPGHTARVAKVKGTGNLTGAVSMREPKSAAEALKGPEAETWRVAMEEEWGALMKNGTWKSENPGRLPAGRKAIRTE*IFKRKLKEDGSVARHKARLVAQRFFTSGG*RFL*NQCPRSSHVDVTYCFSPGRRA*FRIRRHGRRCGVFERPCRRKAVY*ATPPPPRVFPFLSRHT---VCAPPA*SLYGLKQSDRNRNNTLGDFLVGIGLERSITDSCLYVS---RDEGGETNLLVAVYVDDLVIWSSSIT*VSV---LG*KTWALSR------VLGIEVRCDRYNSTITISQGSYIREVLKRYGFEECRGVPTPVEGKVKISAPEGRSGNSTEYRGMVGSLMYALIGTRPDIAYAVHQAALRMEDPCREDFSTCKRIFRYLSTVLTSALRSAVRVMVTV*KDR*RRLGGRCRGPKVHNW----------------IRFQAQRWCNKLVL*EVTVCHVVQYRGRVRCCRRSRKGDGIS*ELLGSIGFGCRGSTTLFEDNKSAINLSKGSRAHCRTKHIGVRWHGIREWIREGILALKYVQTSDQLVDILTKGLSRVQFHRLRILLMWC 2385
            +K LR+D GG+Y    F ++C   GI  ++S  YTPQQNGV+ER  R++ E A++ I  A+M   +WAEAV +AVY  NR+PT   N  TPYE W  + P + +L+VFG   ++   S  RR LD ++   VF+GY   +   ++Y+ E+K+F  S++V F E  F               V + +   +H+   + ED +  P V         PAV  S    E++ MK  E L                  TK                   R R+  +K       +     T +LT      EP+S +EAL G  A  W+ A++EE+ +L+ N TW+   P   P G   I ++ + K K   DG+V RHKARLVAQ +  + G  +     P + H  +    +   +    I +   +   F        +Y + P       F+ +     VC     SLYGLKQS R  N TL  FL   G  +S  D+C+YV     D G  + +++AVYVDD++  S+ I  ++    L  K + ++       +LG+ ++ DR   T+ ISQ  Y+  VL R+G   C+ + TP+E        E    +   Y+  +G L Y    TRPDI+ AV   +  M +P +E ++  KR+ RY+   L   L+           +     G    G    NW                +      WC+K            +Y    +  + +    G    LL  IG      TT++EDN+ AI +SK +R H RTKHI VR+H +RE +    + + Y  T   L DI+TKGL++  F RLR +L  C
Sbjct:  497 VKTLRTDNGGEYVSNDFSKYCVNKGIVHQYSNPYTPQQNGVSERLNRTLMESAKSMIFHANMPINFWAEAVNTAVYLHNRSPTTSLNMKTPYELWFSKKPDVSNLKVFGSVCFIHIPSNLRRKLDPRSRKAVFIGYPLDTKGYKLYDIESKNFVRSKDVVFYENKFHDFKVVTKELIIREDVPEEKLSVDHEQHHDAEDQVPVPTVPDIEDEENLPAVGESY---EESFMKQVENL-----------------ETK-------------------RQRKAPKKFSPDECNI-----TESLT--AENEEPQSISEALNGANASKWKQALKEEYNSLISNETWELVPP---PEGCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGIDYEEVFSPVARHSSIRTLLALANKHNLEIHQMDVKT-AFLNGYIEHDIYMSQPDG-----FVDQEHPEYVCKLKK-SLYGLKQSARCWNQTLDSFLTKNGYRKSNADNCIYVKSIKNDNGFISFVILAVYVDDIIPISNDINMLNAEKDLLCKHFEMTDQGEIHFILGMTIKRDRETKTLFISQQKYLESVLDRFGMANCKPISTPLETTYHKRTEEEEGFDKNLYQQAIGCLTYISTATRPDISAAVSILSSYMSNPSKEHWNGVKRLLRYIKGTLNFGLKFTT-------SENDDENGDELYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRG----LLSDIGCKSEEPTTMYEDNQGAIEISKNARFHNRTKHIDVRFHFVREKVLSNEVKVIYCPTEHMLADIMTKGLTKKIFQRLRSMLNVC 1278          
BLAST of mRNA_H-paniculata_contig17646.4203.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT)

HSP 1 Score: 311 bits (798), Expect = 2.660e-87
Identity = 246/827 (29.75%), Postives = 396/827 (47.88%), Query Frame = 1
Query:    1 IKRLRSDEGGQYTGKPFRQFCAEYGIKQEFSASYTPQQNGVAERSWRSIFEMARTSIITASMGHRYWAEAVRSAVYCLNRAPTRPHNGGTPYEKWHGETPKLDHLRVFGCTTYVMFQSRQRRNLDDKAWAGVFLGYGEASPRDRVYNPENKSFQLSRNVRFDEEDFVTDHRGQQEHDGTCNM-------EDLLLTPPVTPAVTRSRARGEQASMK-DAEPLVEDAPSAGTAAPASRANTTKQSGMEAPRPGDQSPIRTRARAREHREKVPGHTARVAKVKGTGNLTGAVSMREPKSAAEALKGPEAETWRVAMEEEWGALMKNGTWKSENPGRLPAGRKAIRTE*IFKRKLKEDGSVARHKARLVAQRFFTSGG*RFL*NQCPRSSHVDVTYCFSPGRRA*FRIRRHGRRCGVFERPCRRKAVY*ATPPPPRVFPFLSRHT---VCAPPA*SLYGLKQSDRNRNNTLGDFLVGIGLERSITDSCLYVS--RDEGGETNLLV-AVYVDDLVIWSSSIT*VS----VLG*K-----TWALSRVLGIEVRCDRYNSTITISQGSYIREVLKRYGFEECRGVPTPVE-GKV--KISAPEGRSGNSTEYRGMVGSLMYALIGTRPDIAYAVHQAALRMEDPCREDFSTCKRIFRYLSTVLTSALRSAVRVMVTV*KDR*RRLGGRCRGPKVHNWIRFQAQRWCNKLVL*EVTVCHVVQYRGRVRCCRRSR-KGDGIS*EL-----------LGSIGFGCRGSTTLFEDNKSAINLSKGSRAHCRTKHIGVRWHGIREWIREGILALKYVQTSDQLVDILTKGLSRVQFHRLR 2367
            +K LRSD GG+Y  K F+ +  E+GI  + +  Y P+QNG AER  R++ E AR+ +  A M   +WAEAV +A Y  NR+PT   N  TP+E      P + +L+VFGC  YV     QR+ L++K+   +F+GY + +   ++Y+   K+F  SR+V F+E  F   H+ + E     N        ED  + PP+     + +A  E  +++ + +P++E+  +       +R     +            P + RA  R     V              +LT    + EP++ +EA        W+ A + E+ ALM+NGTW+   P   P  +  + +  +FK K K DGSV + KARLVAQ +  + G  +     P   +  +    +      + I +   R    +     + +Y   P       + S+     VC     SLYGLKQS R  N+TL  FL   G ++   DSCLY+   + + G+ N ++ +++VDD++ +S+ +  +      +G K        +S +LG+ ++ DR + T+TISQ  Y+  VLKR+  EEC+ V TP+E GK   ++S  E R  N  EY+ ++G L Y    TRPD+A AV   +  M  P +E +   KRI RY+   L   +    +    +             G    +W      R      + +++ C +     +  C  RS  + + ++  L           L +IG   + ST + EDN++AI LS+  + H RTKHI V +H +RE +++  + + Y +T + L DILTKGL R  F +LR
Sbjct:  560 VKVLRSDNGGEYCSKAFKDYLKEHGILHQTTVPYNPEQNGTAERMNRTLLEAARSMMYHAGMPKEFWAEAVNTATYTRNRSPTNSLNNATPFECLFNRKPDVSNLKVFGCVAYVHIPDHQRKKLEEKSRKCMFVGYPDGTKGFKLYDLTKKTFIRSRDVIFEERSF---HKFKYEQSSESNSDVYYPAKEDSQVNPPI--GQVQIQADDENVNVEQNPQPILEN--NVPLQENNNRVGARYEDNFMREVENLNQPRQRRAPERYEEMYVCAD-----------DLT--ADINEPRNISEAWSNEYNTQWKKATDSEFNALMENGTWELVPP---PDDKNIVGSRWVFKVKRKADGSVEKFKARLVAQGYSQTEGIDYNEVFSPVVRNTSIRSLLALANILDWEIHQMDVRTAFLQGDLTDE-IYMKQPEG-----YRSKENPDHVCKLKK-SLYGLKQSARCWNSTLDSFLKSSGYKQVGADSCLYMKSVKLQNGKINFVILSIHVDDILWFSNDVIMLEEEKVAIGTKFKVEDLGEVSHILGMLIKRDRDSRTLTISQSKYLEGVLKRFNMEECKPVSTPLEPGKQFHELSDDE-RPANIHEYQKIIGCLTYVTTATRPDLAAAVGILSKYMTKPSQEHWKGVKRILRYIKGTLNFGITFQAKDQTCI-----------LTGYSDADWANDTETRRSTSGYIFQISGCTISWCSKKQSCVSRSSTEAEYMALSLATQEAIWLRRLLENIGVKQKESTVMCEDNQAAIQLSRNPKFHNRTKHIDVAFHFVREKVQDKSIDVVYCRTDEMLADILTKGLPRQTFEKLR 1344          
BLAST of mRNA_H-paniculata_contig17646.4203.1 vs. uniprot
Match: A0A7D9I9A2_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9I9A2_PARCT)

HSP 1 Score: 305 bits (780), Expect = 8.450e-87
Identity = 248/854 (29.04%), Postives = 397/854 (46.49%), Query Frame = 1
Query:    1 IKRLRSDEGGQYTGKPFRQFCAEYGIKQEFSASYTPQQNGVAERSWRSIFEMARTSIITASMGHRYWAEAVRSAVYCLNRAPTRPHNGGTPYEKWHGETPKLDHLRVFGCTTYVMFQSRQRRNLDDKAWAGVFLGYGEASPRDRVYNPENKSFQLSRNVRFDEE----------DFVTDHRGQQE--------------------HDGTCN--MEDLLLTPPVTPAVTRSRARGEQASMKDAEPLVEDAPSAGTAAPASRANTTKQSGMEAPRPGDQSPIRTRARAREHREKVPGHTARVAKVKGTGNLTGAVSMREPKSAAEALKGPEAETWRVAMEEEWGALMKNGTWKSENPGRLPAGRKAIRTE*IFKRKLKEDGSVARHKARLVAQRFFTSGG*RFL*NQCPRSSHVDVTYCFSPGRRA*FRIRRHGRR---------CGVFERPCRRKAVY*ATPPPPRVFPFLSRHTVCAPPA*SLYGLKQSDRNRNNTLGDFLVGIGLERSITDSCLYVS---RDEGGETNLLVAVYVDDLVIWSSSIT*VSVLG*KTWALSR------------VLGIEVRCDRYNSTITISQGSYIREVLKRYGFEECRGVPTPVEGKVKIS--APEGRSGNSTEYRGMVGSLMYALIGTRPDIAYAVHQAALRMEDPCREDFSTCKRIFRYLSTVLTSALRSAVRVMVTV*KDR*RRLGGRCRGPKVHNWIRFQAQR----WCNKLVL*EVTVCHVVQYRGRVRCCRRSRKGDGIS*ELLGSIGFGCRGSTTLFEDNKSAINLSKGSRAHCRTKHIGVRWHGIREWIREGILALKYVQTSDQLVDILTKGLSRVQFHRLRILL 2376
            +K LRSD GG+Y    F +FC E GI Q+F+  YTP+QNGVAER  R+I E AR+ I  A++   +WAEA  +AVY  NR+PT      TP+E   GE P + +L+VFGC  YV      RR LD K++  +F+GY   +   +VY+ + + F +SR+V+F E+          DFV + + + E                     D T N   ++  + P V   +  +    +  + ++ EP+       G +   S + T ++  ME  +  +  P+R R    + R+    +   V +     +LT  V   +P+S   AL G  A+ W+ AM  E+ +L++N TW+   P      +  + +  + K K KEDGS+ R KAR+VAQ +  + G  +     P + H  +    +        + +   R         C ++ +              P  F    +         S+YGLKQS R  N+TL  +L   G  +S  D C+YV    +D G  + +++ VYVDD++  S+ I    +L  +  ALS             +LG+ ++ DR     TISQ +Y+  VL ++G E C+ V TP+E   K S  + E    ++  Y+  +G L Y  + +RPDI+ AV   +  M  P ++ +   KR+ RYL   L   L+ +     T+         G     +  +   FQ       W +K    + TV         +     +++   +   LL  +GF  R   T+FEDN+  I L+K ++ H RTKHI +  H +RE ++   + + Y +T D   DILTKGL+R  + +LR L+
Sbjct:  111 VKILRSDNGGEYKSNSFSKFCTEKGIVQQFTCPYTPEQNGVAERLNRTILESARSMIYHANLPLVFWAEACNTAVYLHNRSPTVALKDKTPHECIFGEKPDVSNLKVFGCMCYVHIPDSNRRKLDQKSYEAIFVGYPTGTKGYKVYDVKRRKFMISRDVQFLEKKFHNFENPKNDFVFEQKERIEVPDDEKQTVELFDLDRVDELDDQTFNEDQDEFRVDPVVETNINLNETMEQPVNPENDEPV-------GESETLSTSKTYEERFMENVK--NLGPVRQRMIPSKFRD----NACPVVE-----SLTSEVD--DPESVQRALNGKYAKEWKDAMISEYSSLLENDTWELVPPC---DDQNVVGSRWVLKVKRKEDGSIDRFKARVVAQGYSQTKGADYDEVFSPVARHTSLRTLLALANEYDLEVHQMDVRTAFLNGDIDCDIYMQQ-------------PEGFVNPDKPDYLCKLQKSIYGLKQSARCWNDTLDGYLKSRGYRKSGADGCIYVKSVKKDGGRISFVILGVYVDDIIPVSNDI---QMLNLEKKALSERFKMDDRGEVHYLLGMLIKRDREARVTTISQRNYVERVLSKFGMESCKPVSTPLEPGTKFSELSNEDEKFDTQTYQQAIGCLTYLSVISRPDISAAVGALSQFMAKPSKDHWIGVKRVLRYLKGTLDYGLKYSADKNPTLVGYSDSDWAGDINTRRSTSGYVFQVANSTVSWSSKR---QRTVAKSSTEAEYIALSLATQEAIWLQ-RLLYDVGFKIRKPITIFEDNQGTIELAKNAKYHNRTKHIDICHHFVRERVQSKEINVVYCRTDDMKADILTKGLARSSYEKLRDLI 921          
BLAST of mRNA_H-paniculata_contig17646.4203.1 vs. uniprot
Match: A0A8J2RPB7_9CRUS (Hypothetical protein n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2RPB7_9CRUS)

HSP 1 Score: 311 bits (796), Expect = 1.340e-86
Identity = 257/811 (31.69%), Postives = 375/811 (46.24%), Query Frame = 1
Query:    1 IKRLRSDEGGQYTGKPFRQFCAEYGIKQEFSASYTPQQNGVAERSWRSIFEMARTSIITASMGHRYWAEAVRSAVYCLNRAPTRPHNGGTPYEKWHGETPKLDHLRVFGCTTYVMFQSRQRRNLDDKAWAGVFLGYGEASPRDRVYNPENKSFQLSRNVRFDEEDFVTDHRGQQEHDGTCNMEDLLLTPPVTPAVTRSRARGEQASMKDAEPLVEDAPSAGTAAPA-----SRANTTKQSGMEAPRPGDQSPIRTRARAREHREKVPGHTARVAKVKGTGNLTGAVSMREPKSAAEALKGPEAETWRVAMEEEWGALMKNGTWKSENPGRLPAGRKAIRTE*IFKRKLKEDGSVARHKARLVAQRFFTSGG*RFL*NQCPRSSHVDVTYCFSPGRRA*FRIRRHGRRCGVFERPCRRKAVY*ATPPPPRVFPFLSRHTVCAPPA*SLYGLKQSDRNRNNTLGDFLVGIGLERSITDSCLYVSRDEGGETNLLVAVYVDDLVIWSSS-------IT*VSVLG*KTWA-LSRVLGIEVRCDRYNSTITISQGSYIREVLKRYGFEECRGVPTPVEGKVKISAPEGRSGN-STEYRGMVGSLMYALIGTRPDIAYAVHQAALRMEDPCREDFSTCKRIFRYLSTVLTSAL-----RSAVRVMVTV*KDR*RRLGGRCRGPKVHNWIRFQAQRWCNK---LVL*EVTVCHVVQYRGRVRCCRRSRKGDGIS*ELLGSIGFGCRGSTTLFEDNKSAINLSKGSRAHCRTKHIGVRWHGIREWIREGILALKYVQTSDQLVDILTKGLSRVQFHRLR 2367
            +  LRSD GG+Y    F ++  E GIK E SA  TP+QNGV+ERS R+I E AR+ +  AS+    WAEA  +AVY  NR  +R   G TPYE W G  P L HLRVFG   YV     +R   D KA   + +GY E     R+++P  +  + SR+V F+EE F    R     D      +     P     + S    E    ++  P+ +D  S    AP      +  N  K+  +    P +++P+ TR R +  R      T + A +         + + EP++  EAL   E++ W  AM+EE+ +L+KN TW   N   LPAGR AIR + +FK K    G+  R+KARLVA+ F    G  +     P   H  +    +        + +   +          + +Y   P    V      H VC     SLYGLKQ+ R+ N    +FLV  G  +S  D C+Y  + E   T  ++A++VDD ++ SS        +  +  +   T+  +   +GI++R +R    I ISQ  YI   LK++  E C     P +   ++S    R  N S  +R  VGSLM+A   TRPDIA+AV+Q A    +P +  +   KRI  YL   +TS +     +    ++     D    L  +     V  ++      W ++    V    T    V      +     R       +LL  IG      TTL  DN+ AI+L K S    R+KHI V++H IR+ ++EG + ++Y+ TS QL DILTK L    F RLR
Sbjct:  611 VATLRSDNGGEYFSNAFEEWLKERGIKHESSAPKTPEQNGVSERSNRTIVEPARSMLHAASLPIELWAEASNTAVYIKNRVVSRSREGKTPYEIWKGIKPNLSHLRVFGADAYVHVPKDERTKFDPKAIKCIHVGYCETQKAFRLWDPATRKVRTSRDVLFNEERFFPISREFSFIDPPLVYTEPTELIPGNSMSSPSENPSETLPPENQLPVNQDQSSETREAPIVIVNPAVTNPRKKKQVIIITPREENPLGTRLRNKPSRWIEESQTEKYAGM-------ALLDVEEPETVEEALNSAESKKWMSAMDEEYQSLVKNNTWTICN---LPAGRNAIRNKWVFKIK---SGAEDRYKARLVAKGFTQRPGIDYEETYSPVVRHDSLRAVLAITAAENLEMVQLDVKTAFLNGDLHEE-LYMFQPTGFEV--EGQEHLVCRLNK-SLYGLKQASRSWNEKFNNFLVQYGFSQSKADPCVYTIKTETELT--IMAIWVDDGIVCSSLQSRLKDIVRYLEKVFEMTYGDVECFVGIQIRRNRERGLIHISQEKYIERTLKKFHMESCYSKSVPADPHARLSNNVERDPNDSFPFREAVGSLMFAATCTRPDIAFAVNQVAQFSTNPAKAHWEAVKRILSYLRGTITSGVCYGGVQERNMLLTYSDSDFAGDLVSKKSTTGVFCFLNGGPVAWSSRRQDCVSLSSTEAEYVAASAATKTVIWFR-------QLLDDIGCEQTSPTTLLCDNQGAISLVKNSGHQARSKHIDVKYHHIRDMVKEGAIHIEYIHTSQQLADILTKPLDGQLFSRLR 1395          
BLAST of mRNA_H-paniculata_contig17646.4203.1 vs. uniprot
Match: A0A446MQR5_TRITD (Uncharacterized protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446MQR5_TRITD)

HSP 1 Score: 302 bits (773), Expect = 9.690e-84
Identity = 253/814 (31.08%), Postives = 381/814 (46.81%), Query Frame = 1
Query:    1 IKRLRSDEGGQYTGKPFRQFCAEYGIKQEFSASYTPQQNGVAERSWRSIFEMARTSIITASMGHRYWAEAVRSAVYCLNRAPTRPHNGGTPYEKWHGETPKLDHLRVFGCTTYVMFQSRQRRNLDDKAWAGVFLGYGEASPRDRVYNPENKSFQLSRNVRFDEEDFVTDHRGQQEHDGT----CNMEDLLLT---PPVTPAVTRSRAR-GEQASMKDAEPLVEDAPSAGTAAPASRANTTKQSGMEAPRPGDQSPIRTRARAREHREKVPGHTARVAKVKGTGNLTGAVSMREPKSAAEALKGPEAETWRVAMEEEWGALMKNGTWKSENPGRLPAGRKAIRTE*IFKRKLKEDGSVARHKARLVAQRFFTSGG*RFL*NQCPRSSHVDVTYCFSPGRRA*FRIRRHGRRCGVFERPCRRKAVY*ATPPPPRVFPFLSRHTVCAPPA*SLYGLKQSDRNRNNTLGDFLVGIGLERSITDSCLYVSRDEGGETNLLVAVYVDDLVIWSSSIT*VSVLG*KT---------WALSRVLGIEVRCDRYNSTITISQGSYIREVLKRYGFEECRGVPTPVEGKVKISAP-EGRSGNSTEYRGMVGSLMYALIGTRPDIAYAVHQAALRMEDPCREDFSTCKRIFRYLSTVLTSALRSAVR------VMVTV*KDR*RRLGGRCRGPKVHNWIRFQAQRWCN-KLVL*EVTVCHVVQYRGRVRCCRRSRKGDGIS*ELLGSIGFGCRGSTTLFEDNKSAINLSKGSRAHCRTKHIGVRWHGIREWIREGILALKYVQTSDQLVDILTKGLSRVQFHRLR 2367
            +K LRSD GG++T   F  FC ++GI+++ +A Y+PQQNGV ER  +++  MAR  + + +M   YW EAV +A+Y LNRAPT+   G TPYE W+G  P + HLR FGC  +V         L D++   V +GY + S   R+ NPE     +SR+V F+E       +G Q   G      +  D  L    P  T +V    A+ GE A  ++    +    +    +P   A  T  S + A  P   +P++ R+   E  +    H +              +   EP    +ALK    E W+ AMEEE  ++ +N TW+   P   P G +AI  + +FK K   +G+V RHKARLVA+ +    G  F     P +    V    +      +R+  H      F      + VY A PP    F    +         +LYGL+Q+ R  N  L   L+ +G  RS  +  +Y+     G   LLV VYVDDL+I  SS   V++   +            LS  LGIEV   +    I++ Q +Y  ++L++ G  +C    TP+E ++K+S   EG   + T YR +VGSL Y L+ TRPDI+YAV   +  ME P  +  +  K+I +Y+   L    + +        ++     D    +  R     V  ++      W + K  +  ++ C           C+    G  ++ E+ G           L  DNKSAI+L+K    H R+KHI +R+H IR+ +  G + + YV T DQL D+LTK L R++F  LR
Sbjct:  642 LKVLRSDRGGEFTSVEFNSFCEDHGIQRQLTAPYSPQQNGVVERRNQTVVAMARCLLKSQNMPGCYWGEAVATAIYILNRAPTKSVAGKTPYEAWNGYKPNVGHLRTFGCLAHVKVTGPSGGKLADRSIPMVLIGYEKGSNAYRLVNPETNRVCVSRDVVFEES------KGWQWSSGDDVTISDDTDRFLVHFEPEQTESVNDHAAQEGENAENREGTEPITPRQAVLPGSPVIPAMVTPISSVAAESPESSAPLKMRS-LDEIFDATSPHWSPADYDHMEELELCMLGAEEPTHHNDALKH---EHWKKAMEEELKSIKENDTWEMVTP---PTGVRAIGLKWVFKLKKDVEGNVIRHKARLVAKGYVQRHGIDFDEVFAPVARLETVRLLMALAANEGWRVH-HMDVKSAFLNGELEEEVYVAQPPG---FIETGKEGKVLKLRKALYGLRQAPRAWNLKLDQTLLSLGFIRSPVEHAVYMKNS--GNARLLVGVYVDDLIITGSSAEEVAMFKEQMKDMFSMSDLGLLSYYLGIEVA--QAEDGISLCQSAYALKILEKTGMLDCNPCQTPMEERLKLSKNGEGPKVDPTYYRSVVGSLRY-LVNTRPDISYAVGVVSRYMESPNSQHMAAVKQILKYIRGTLNLGCKYSQNKGEKPSLLGYSDSDHGGDVDDRKSTTGVLYFLGKSPITWLSQKQKVVAISSCEAEYIAAASAACQGLWLGQLLA-EMEGKQPV----QVELLVDNKSAISLAKNPVHHDRSKHIDIRYHFIRDCVENGKIGVNYVPTGDQLADLLTKPLGRLKFLELR 1428          
BLAST of mRNA_H-paniculata_contig17646.4203.1 vs. uniprot
Match: B8YLY7_LOTJA (Gag-Pol polyprotein n=1 Tax=Lotus japonicus TaxID=34305 RepID=B8YLY7_LOTJA)

HSP 1 Score: 299 bits (765), Expect = 5.590e-83
Identity = 244/830 (29.40%), Postives = 376/830 (45.30%), Query Frame = 1
Query:    1 IKRLRSDEGGQYTGKPFRQFCAEYGIKQEFSASYTPQQNGVAERSWRSIFEMARTSIITASMGHRYWAEAVRSAVYCLNRAPTRPHNGGTPYEKWHGETPKLDHLRVFGCTTYVMFQSRQRRNLDDKAWAGVFLGYGEASPRDRVYNPENKSFQLSRNVRFDEEDFVTDHRGQQEHDGTCNMEDLLLTPPVTPAVTRSRARGEQASMKDAEPLVEDAPSAGTAAPASRANTTKQSGMEAPRPGDQSPIRTRARARE---HREKVPGHTARVAKVKGTGNLTGAVSMREPKSAAEALKGPEAETWRVAMEEEWGALMKNGTWKSENPGRLPAGRKAIRTE*IFKRKLKEDGSVARHKARLVAQRFFTSGG*RFL*NQCPRSSHVDVTYCFSPGRRA*FRIRRHGRRCGVFERPCRR-------------KAVY*ATPPPPRVFPFLSRHTVCAPPA*SLYGLKQSDRNRNNTLGDFLVGIGLERSITDSCLYVSRDEGGETNLLVAVYVDDLVIWSSSIT*VSVLG*KT---------WALSRVLGIEVRCDRYNSTITISQGSYIREVLKRYGFEECRGVPTPVEGKVKISAP-------EGRSGNSTEYRGMVGSLMYALIGTRPDIAYAVHQAALRMEDPCREDFSTCKRIFRYLSTVLTSAL---RSAVRVMVTV*KDR*RRLGGRCRGPKVHNWIRFQAQRWCNKLVL*EVTVCHVVQYRGRVRCCRRSRKGDGIS*ELLGSIGFGCRGSTTLFEDNKSAINLSKGSRAHCRTKHIGVRWHGIREWIREGILALKYVQTSDQLVDILTKGLSRVQFHRLRILLMWC 2385
            IK LR+D GG+YT   F  FC + GI ++F+ ++TPQQNGVAER  R++ E  R  + TA +   +WAEA ++A Y +NR+P+      TP E W G+      LRVFGC  YVM+ S++R  LD K+    FLGY +     R+++P  +   +SR+V F E +     + +Q++DGT            T  V      GE+ S  +AEP                               D  P RT  + R+   H E V         +   G         EP +  EA+ G +A  W  AM+EE  AL +N TW+      LP GRKAI  + +FK K   +  V R++ARLV + +    G             +D    FSP  R    IR     C  FE    +             + +Y   P     F    R  +      SLYGLKQ+ R        F++ +G  R  +D C Y  R + G+  +L+ +YVDD+++   +   V  L  +             +++LG+++  DR +  I +SQ +Y+++VL+R+  ++   + TP+    K+S+        E    +   Y   VGSLMYA+I TRPDIA AV   +  M DP +E ++  KRI RY+     +AL    S   +   V  D    L  R         +   A  W +KL           +Y    + C+ +         LL  +G   +   T++ D+ SA+++++    H RTKHIGV++H +RE + EG + ++ + T D L D++TK ++  +F       +WC
Sbjct:  544 IKCLRTDNGGEYTDGDFLAFCKQEGITRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGLAKSFWAEAAKTACYVINRSPSTAIGLKTPMEMWKGKPGDYSSLRVFGCPVYVMYNSQERTKLDPKSRRCTFLGYADNVKGYRLWDPTARKIFVSRDVIFVENEL----QKEQKNDGTTKE---------TATVEIEEKSGEENS--EAEPXXXX--------------------XXXXXXXDAEPRRTTRQIRKPSWHSEYVMASHDAYCLLSEDG---------EPSTFHEAVNGSDASLWMAAMQEEIEALHRNNTWELVE---LPKGRKAIGNKWVFKIKRDGNDQVERYRARLVVKGYAQKEG-------------IDFNEIFSPVVRL-TTIRIVLAMCAAFELHLEQLDVKTAFLHGELEEEIYMLQP---EGFEEKERENLVCRLTKSLYGLKQAPRCWYKRFDSFIMSLGYNRLSSDHCTYYKRFDDGDFIILL-LYVDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLQKVLRRFNMQDYNPISTPLPVNYKLSSSMIPSSEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGTVSRFMADPGKEHWNAVKRILRYIRGTSGAALCFGGSEFTIRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWTQ----RLLEELGHKQQ-KITVYCDSPSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVNMQKIHTKDNLADVMTKPINSDKF-------IWC 1296          
BLAST of mRNA_H-paniculata_contig17646.4203.1 vs. uniprot
Match: A0A7D9ESN8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9ESN8_PARCT)

HSP 1 Score: 299 bits (766), Expect = 6.460e-83
Identity = 246/853 (28.84%), Postives = 393/853 (46.07%), Query Frame = 1
Query:    1 IKRLRSDEGGQYTGKPFRQFCAEYGIKQEFSASYTPQQNGVAERSWRSIFEMARTSIITASMGHRYWAEAVRSAVYCLNRAPTRPHNGGTPYEKWHGETPKLDHLRVFGCTTYVMFQSRQRRNLDDKAWAGVFLGYGEASPRDRVYNPENKSFQLSRNVRFDEE----------DFVTDHRGQ-------------------QEHDGTCNME--DLLLTPPVTPAVTRSRARGEQASMKDAEPLVEDAPSAGTAAPASRANTTKQSGMEAPRPGDQSPIRTRARAREHREKVPGHTARVAKVKGTGNLTGAVSMREPKSAAEALKGPEAETWRVAMEEEWGALMKNGTWKSENPGRLPAGRKAIRTE*IFKRKLKEDGSVARHKARLVAQRFFTSGG*RFL*NQCPRSSHVDVTYCFSPGRRA*FRIRRHGRR---------CGVFERPCRRKAVY*ATPPPPRVFPFLSRHTVCAPPA*SLYGLKQSDRNRNNTLGDFLVGIGLERSITDSCLYVS---RDEGGETNLLVAVYVDDLVIWSSSIT*VSVLG*KTWALSR------------VLGIEVRCDRYNSTITISQGSYIREVLKRYGFEECRGVPTPVEGKVKIS--APEGRSGNSTEYRGMVGSLMYALIGTRPDIAYAVHQAALRMEDPCREDFSTCKRIFRYLSTVLTSALRSAVRVMVTV*KDR*RRLGGRCRGPKVHNWIRFQAQR----WCNKLVL*EVTVCHVVQYRGRVRCCRRSRKGDGIS*ELLGSIGFGCRGSTTLFEDNKSAINLSKGSRAHCRTKHIGVRWHGIREWIREGILALKYVQTSDQLVDILTKGLSRVQFHRLRILL 2376
            +K LRSD GG+Y    F +FC E GI Q+F+  YTP+QNGVAER  R+I E AR+ I  A++   +WAEA  +AVY  NR+PT      TP+E   GE P + +L+VFGC  YV      RR LD K++  +F+GY   +   +VY+ + + F +SR+V+F E+          DF  D + +                    E D T N +  +  + P V   +  +    +  + ++ EP+       G +   S + T ++  ME  +  +   +R R    + R+    +   V +     +LT  V   +P+S   AL G  A+ W+ AM  E+ +L++N TW+   P      +  + +  + K K KEDGS+ R KAR+VAQ +  + G  +     P + H  +    +        + +   R         C ++ +              P  F    +         S+YGLKQS R  N+TL  +L   G  +S  D C+YV    +D G  + +++ VYVDD++  S+ I    +L  +  ALS             +LG+ ++ DR     TISQ +Y+  VL + G E C+ V TP+E   K S  + E    ++  Y+  +G L Y  + +RPDI+ AV   +  M  P +  +   KR+ R+L   L   L+ +     T+         G     +  +   FQ       W +K    + TV         +     +++   +   LL  +GF  R   T+FEDN+  I L+K ++ H RTKHI +  H +RE ++   + + Y +T D   DILTKGL+R  + +LR L+
Sbjct:  568 VKILRSDNGGEYKSNSFSKFCTEKGIVQQFTCPYTPEQNGVAERLNRTILESARSMIYHANLPLVFWAEACNTAVYLHNRSPTVALKDKTPHECIFGEKPDVSNLKVFGCMCYVHIPDSNRRKLDQKSYEAIFVGYPTGTKGYKVYDVKRRKFMISRDVQFLEKKFHNFENPKNDFAFDQKERIEVPDDEKQTDELFDLDRVDELDQTFNEDHDEFRVDPVVETNINLNETMEQPVNPENDEPV-------GESETPSTSKTYEERFMENVK--NLGTVRQRMIPSKFRD----NACPVVE-----SLTSEVD--DPESVQRALNGKYAKEWKDAMISEYSSLLENDTWELVPPS---DDQNVVGSRWVLKVKRKEDGSIDRFKARVVAQGYSQTKGADYDEVFSPVARHTSLRTLLALANEYDLEVHQMDVRTAFLNGDIDCDIYMQQ-------------PEGFVNPDKPDYLCKLQKSIYGLKQSARCWNDTLNGYLKSRGYRKSGADGCIYVKSVKKDGGRISFVILGVYVDDIIPVSNDI---QMLNSEKKALSERFKMDDRGEVHYLLGMLIKRDRKARVTTISQRNYVERVLSKLGMESCKPVSTPLEPGTKFSKLSNEDEKFDTQTYQQAIGCLTYLSVISRPDISAAVGALSQFMAKPSKNHWIGVKRVLRFLKGTLDYGLKYSADENPTLVGYSDSDWAGDINTRRSTSGYVFQVANSTVSWSSKR---QRTVAKSSTEAEYIALSLATQEAIWLQ-RLLYDVGFKIRKPITIFEDNQGTIELAKNAKYHNRTKHIDICHHFVRERVQSKEINVVYCRTDDMKADILTKGLARSSYEKLRDLI 1377          
BLAST of mRNA_H-paniculata_contig17646.4203.1 vs. uniprot
Match: A0A151R6U8_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Cajanus cajan TaxID=3821 RepID=A0A151R6U8_CAJCA)

HSP 1 Score: 295 bits (756), Expect = 6.520e-82
Identity = 237/827 (28.66%), Postives = 374/827 (45.22%), Query Frame = 1
Query:    1 IKRLRSDEGGQYTGKPFRQFCAEYGIKQEFSASYTPQQNGVAERSWRSIFEMARTSIITASMGHRYWAEAVRSAVYCLNRAPTRPHNGGTPYEKWHGETPKLDHLRVFGCTTYVMFQSRQRRNLDDKAWAGVFLGYGEASPRDRVYNPENKSFQLSRNVRFDEEDFVTDHRGQQEHDGTCNMEDLLLTPPVTPAVTRSRARGEQASMKDAEPLVEDAPSAGTAAPASRANTTKQSGMEAPRPGDQSPIRTRARAREHREKVPGHTARVAKVKGTGNLTGAVSMREPKSAAEALKGPEAETWRVAMEEEWGALMKNGTWKSENPGRLPAGRKAIRTE*IFKRKLKEDGSVARHKARLVAQRFFTSGG*RFL*NQCPRSSHVDVTYCFSPGRRA*FRIRRHGRRCGVFERPCRR-------------KAVY*ATPPPPRVFPFLSRHTVCAPPA*SLYGLKQSDRNRNNTLGDFLVGIGLERSITDSCLYVSRDEGGETNLLVAVYVDDLVIWSSSIT*VSVLG*KT---------WALSRVLGIEVRCDRYNSTITISQGSYIREVLKRYGFEECRGVPTPVEGKVKISAPEGRSGNSTE-------YRGMVGSLMYALIGTRPDIAYAVHQAALRMEDPCREDFSTCKRIFRYLSTVLTSAL---RSAVRVMVTV*KDR*RRLGGRCRGPKVHNWIRFQAQRWCNKLVL*EVTVCHVVQYRGRVRCCRRSRKGDGIS*ELLGSIGFGCRGSTTLFEDNKSAINLSKGSRAHCRTKHIGVRWHGIREWIREGILALKYVQTSDQLVDILTKGLSRVQFHRLRILLMWC 2385
            IK LR+D GG+Y    F  FC + GIK++F+ ++TPQQNGVAER  R++ E  R  + TA +   +WAEAV++A Y +NR+P+      TP E W+G+      L VFGC  YVM+ S++R  LD K+   +FLGY +     R+++P  +   +SR+V F E    T+ + +QE+D T     ++     +     S A  E    +  E    D              TT+Q+                       +K   H+  V        L       EP +  EAL+  +   W  AM EE  AL +N TW+  +   LP GRKAI  + ++K K   +  V R++ARLV + +    G             +D    FSP  R    IR     C  F     +             + +Y   P     F    +  +      SLYGLKQ+ R        F++ +G  R  +D C Y +R +  +  +L+ +YVDD+++   +   +  L  +             +++LG+++  DR N  I +SQ +Y+ +VL+R+  ++C+ + TP+    K+S+    S  +         Y   VGSLMYA+I TRPDIA AV   +  M DP RE +S  KRI RY+      AL    S   V   V  D    L  R         +   A  W +KL           +Y    + C+ +         LL  +G   +   T++ D++SA+++++    H RTKHIG+++H +RE + EG + ++ + T D + D++TK ++  +F        WC
Sbjct:  494 IKCLRTDNGGEYIDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEAVKTACYLINRSPSTAIGLKTPMEMWNGKPSNYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAE----TELQKEQENDSTIKDTSIVEIGGKSKEDDTSEAEQEHDEQEPNEDNDGDV-----------RRTTRQT-----------------------KKPSWHSDYVMASHDAYCLL--TEEGEPSTFQEALRSSDVSQWMAAMHEEIEALHRNKTWELVD---LPKGRKAIGCKWVYKIKRDGNDQVERYRARLVVKGYAQKEG-------------IDFNEIFSPVVRL-TTIRVVLAMCAAFNLHLEQLDVKTAFLHGELQEEIYMLQP---EGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLGYNRLSSDHCTYYNRFDDNDFIILL-LYVDDMLVVGPNKDQIQELKAQLAREFDMKDLGPANKILGMQIHRDRKNRRIWLSQKNYLLKVLRRFNMQDCKPISTPLPVNYKLSSSMSPSNEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGAVSRFMADPGREHWSIVKRILRYIKGTSDVALCFEGSEFFVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWIQ----RLLEELGHK-QEKITVYCDSQSALHIARNPAFHSRTKHIGIQYHFVREVVEEGKVDMQKIHTKDNIADVMTKPVNTDKFT-------WC 1247          
BLAST of mRNA_H-paniculata_contig17646.4203.1 vs. uniprot
Match: A0A6A2WSU7_HIBSY (Integrase catalytic domain-containing protein n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WSU7_HIBSY)

HSP 1 Score: 291 bits (744), Expect = 2.070e-80
Identity = 242/818 (29.58%), Postives = 370/818 (45.23%), Query Frame = 1
Query:    1 IKRLRSDEGGQYTGKPFRQFCAEYGIKQEFSASYTPQQNGVAERSWRSIFEMARTSIITASMGHRYWAEAVRSAVYCLNRAPTRPHNGGTPYEKWHGETPKLDHLRVFGCTTYVMFQSRQRRNLDDKAWAGVFLGYGEASPRDRVYNPENKSFQLSRNVRFDEEDFVTDHRGQQEHDGTCNME---DLL-LTPPVTPAVTRSRARGEQASMKDAEPLVEDAPSAGTAAPASRANTTKQSGMEAPRPGDQSPIRTRARAREHREKVPGHTARVAKVKGTGNLTGAVSMREPKSAAEALKGPEAETWRVAMEEEWGALMKNGTWKSENPGRLPAGRKAIRTE*IFKRKLKEDGSVARHKARLVAQRFFTSGG*RFL*NQCPRSSHVDVTYCFSPGRRA*FRIRRHGRRCGVFERPCRRKAVY*ATPP-------PPRVFPFLSRHTVCAPPA*SLYGLKQSDRNRNNTLGDFLVGIGLERSITDSCLYVSRDEGGETNLLVAVYVDDLVI----------WSSSIT*VSVLG*KTWALSRVLGIEVRCDRYNSTITISQGSYIREVLKRYGFEECRGVPTPVEGKVKISAPEGRSG-NSTEYRGMVGSLMYALIGTRPDIAYAVHQAALRMEDPCREDFSTCKRIFRYLSTVLTSAL---RSAVRVMVTV*KDR*RRLGGRCRGPKVHNWIRFQAQR----WCNKLVL*EVTVCHVVQYRGRVRCCRRSRKGDGIS*ELLGSIGFGCRGSTTLFEDNKSAINLSKGSRAHCRTKHIGVRWHGIREWIREGILALKYVQTSDQLVDILTKGLSRVQFHRLR 2367
            +K LRSD GG+YT K F +FC E+GI  + +A YTPQQNGVAER  R+I +MAR+ I    +   +WAEAVR AVY LNR PT+     TP E W G+ P + H ++FGC  Y       R+ LDD+    +F+GY E S   R+YNP  K   +SR+V FDE D+      +++ +G    +   DL+           R       +S  DA  ++ED                     EAP      P   +   RE R     +   +  V    +L   +   +P +  EA+   E + WR AM+EE  ++ +N TW+     R P G   I  + ++K K+ ++G+V ++KARLV + +    G  +     P +    +    +   +  ++I +   +   F      + VY   PP         +V+              +LYGLKQ+ R  N  + ++    G  +S  +  LY  ++E G+  ++V +YVDD++           +  ++T    +      +S  LG+EV+  +    IT     Y  E+L+++  E+C+ V TP E  VK+S    R   N T ++ +VGSL Y  I TRPDI YAV   +  ME P ++ +S  KRI RY+       L    S    +V          GG     K      F        W +K            +Y     C  ++     I    L  +       TT++ DNKS I+L+K   +H R+ HI  ++H IRE ++   + L Y +T DQL DI TK L    F+RL+
Sbjct:  453 LKILRSDRGGEYTSKLFEEFCKEHGIIHQLTARYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHFKIFGCIAYAHVPEHTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKIIISRDVEFDEADYWRWSEEEKKVEGLFFEDKDGDLINQDEQADDQDPRQNLPSSSSSSSDASNIIED--------------------PEAP------PTELQRSTRERRMPERYNDYELNNV----SLFCLLVNSDPITYEEAV---EDDKWRNAMDEEIASIERNDTWELT---RQPEGHNPIGVKWVYKTKINKEGNVEKYKARLVVKGYKQRQGIDYDEVFAPVARIETIRLLTAVATQKGWKIYQMDVK-SAFLNGYLEEEVYIEQPPGYIRKGHEDKVYRLKK----------ALYGLKQAPRAWNTRIDEYFQRNGFMKSPYEHALYTKKNEDGDI-MIVCLYVDDMIFTGNNPGMFNDFKKAMTKEFEMT-DIGEMSYFLGVEVKQMQEGIFIT---KKYAEEILRKFRMEDCKPVATPAEPGVKLSVNSTREQVNPTLFKSIVGSLRYLTI-TRPDITYAVGLVSRFMEHPKQDHWSAAKRILRYVKGTTGHGLFYMHSENSKLVGYSDSD---YGGDLDDQKSTTGYLFHIGSAVFSWSSKKQQTVALSTCEAEYIAAAACTCQAMWLRNI----LNELNLAQEEPTTIYVDNKSTISLAKNPVSHSRSNHIDTKYHFIREQVKNKNVELIYCRTEDQLADIFTKPLRAYIFNRLK 1210          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17646.4203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6S7H8C9_PARCT5.210e-9230.04Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A7D9DPP1_PARCT7.150e-9030.04Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A7D9IUY0_PARCT2.660e-8729.75Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A7D9I9A2_PARCT8.450e-8729.04Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A8J2RPB7_9CRUS1.340e-8631.69Hypothetical protein n=1 Tax=Daphnia galeata TaxID... [more]
A0A446MQR5_TRITD9.690e-8431.08Uncharacterized protein n=1 Tax=Triticum turgidum ... [more]
B8YLY7_LOTJA5.590e-8329.40Gag-Pol polyprotein n=1 Tax=Lotus japonicus TaxID=... [more]
A0A7D9ESN8_PARCT6.460e-8328.84Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A151R6U8_CAJCA6.520e-8228.66Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A2WSU7_HIBSY2.070e-8029.58Integrase catalytic domain-containing protein n=2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17646contigH-paniculata_contig17646:933..3536 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size2385
Cds size192
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17646.4203.1prot_H-paniculata_contig17646.4203.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig17646 1386..1577 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929381.0531712-UTR-H-paniculata_contig17646:932..13851622929381.0531712-UTR-H-paniculata_contig17646:932..1385Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17646 933..1385 -
1691480838.6275494-UTR-H-paniculata_contig17646:932..13851691480838.6275494-UTR-H-paniculata_contig17646:932..1385Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17646 933..1385 -
1622929381.0808866-UTR-H-paniculata_contig17646:1577..16111622929381.0808866-UTR-H-paniculata_contig17646:1577..1611Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17646 1578..1611 -
1691480838.6559649-UTR-H-paniculata_contig17646:1577..16111691480838.6559649-UTR-H-paniculata_contig17646:1577..1611Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17646 1578..1611 -
1622929381.0917075-UTR-H-paniculata_contig17646:1692..27801622929381.0917075-UTR-H-paniculata_contig17646:1692..2780Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17646 1693..2780 -
1691480838.6664314-UTR-H-paniculata_contig17646:1692..27801691480838.6664314-UTR-H-paniculata_contig17646:1692..2780Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17646 1693..2780 -
1622929381.1021307-UTR-H-paniculata_contig17646:2918..35361622929381.1021307-UTR-H-paniculata_contig17646:2918..3536Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17646 2919..3536 -
1691480838.681717-UTR-H-paniculata_contig17646:2918..35361691480838.681717-UTR-H-paniculata_contig17646:2918..3536Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17646 2919..3536 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929381.0685303-CDS-H-paniculata_contig17646:1385..15771622929381.0685303-CDS-H-paniculata_contig17646:1385..1577Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17646 1386..1577 -
1691480838.6435716-CDS-H-paniculata_contig17646:1385..15771691480838.6435716-CDS-H-paniculata_contig17646:1385..1577Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17646 1386..1577 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig17646.4203.1

>prot_H-paniculata_contig17646.4203.1 ID=prot_H-paniculata_contig17646.4203.1|Name=mRNA_H-paniculata_contig17646.4203.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=64bp
MVGSLMYALIGTRPDIAYAVHQAALRMEDPCREDFSTCKRIFRYLSTVLT
SALRSAVRVMVTV*
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mRNA from alignment at H-paniculata_contig17646:933..3536-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig17646.4203.1 ID=mRNA_H-paniculata_contig17646.4203.1|Name=mRNA_H-paniculata_contig17646.4203.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2604bp|location=Sequence derived from alignment at H-paniculata_contig17646:933..3536- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATTAAACGCCTTCGGTCGGATGAGGGAGGACAGTATACTGGGAAGCCATT TAGGCAATTCTGCGCGGAATATGGCATCAAGCAGGAGTTCTCTGCCTCCT ACACACCGCAGCAAAACGGTGTGGCGGAGCGCAGCTGGCGCAGTATCTTT GAAATGGCAAGAACCAGCATAATCACCGCCAGCATGGGTCATCGATATTG GGCGGAAGCGGTGCGCTCGGCAGTGTACTGCCTAAATCGCGCCCCGACGC GACCGCACAACGGAGGAACGCCGTACGAAAAATGGCACGGCGAGACACCA AAGTTGGACCACCTTCGCGTCTTCGGCTGCACGACGTATGTTATGTTCCA GTCACGGCAGAGACGTAATCTCGATGACAAAGCATGGGCGGGGGTGTTTC TGGGGTACGGCGAGGCCAGCCCGCGTGATCGCGTATATAACCCGGAAAAC AAGAGCTTCCAGTTGAGCAGGAACGTGAGATTTGACGAAGAGGACTTTGT AACGGACCATCGCGGACAGCAGGAGCACGACGGGACGTGCAACATGGAAG ATTTGTTGCTAACACCACCAGTCACGCCAGCGGTCACTCGATCGCGCGCC CGAGGCGAGCAAGCAAGCGTAACTAACACGGAAAACCGGACGTTGGCATC ACAAATGCTGCCGATATTACCGACATATTCGCTGCCAGCCGCCAGCGCAA ATTCATTCAGTGTCTTGAGACATGGCGATGATGGCGAAAATAACGGCGAC TCCAAGATGAAGGATGCGGAGCCCTTAGTCGAAGACGCACCATCAGCAGG GACAGCCGCACCCGCGTCGCGGGCGAACACCACGAAGCAGTCAGGGATGG AGGCGCCGCGTCCGGGAGATCAGTCACCAATACGAACACGAGCGAGAGCA AGGGAACACCGCGAAAAAGTTCCAGGCCATACCGCGCGCGTGGCAAAAGT GAAAGGCACTGGCAACCTTACAGGGGCGGTATCTATGCGGGAGCCGAAAT CCGCGGCAGAAGCATTAAAGGGTCCAGAGGCGGAAACATGGCGCGTGGCA ATGGAGGAAGAATGGGGGGCGTTAATGAAAAATGGGACATGGAAAAGCGA AAACCCGGGGAGGTTACCCGCAGGGCGGAAGGCGATTCGTACGGAATAGA TTTTCAAGCGGAAACTGAAGGAGGACGGCAGCGTGGCACGCCACAAAGCG CGACTGGTGGCTCAAAGGTTTTTCACGAGTGGAGGGTGAAGATTTCTTTG AAACCAGTGCCCCCGTAGCTCGCATGTCGACGTTACGTACTGTTTTTCGC CTGGCCGCCGAGCATGATTTCGAATTAGAAGGCATGGACGTAGATGCGGC GTATTTGAACGCCCCTGTAGAAGAAAAGCTGTTTATTAAGCTACCCCCCC CCCCCCCCGAGTTTTCCCCTTTCTCTCGAGACATACCGTTTGTGCGCCGC CTGCGTAAAGCCTGTACGGCCTCAAGCAGAGCGACCGAAACCGGAATAAT ACTCTTGGCGATTTTCTTGTCGGCATAGGACTCGAACGTTCCATTACCGA TTCATGCCTGTACGTTTCCCGCGACGAAGGGGGAGAGACAAACCTTCTGG TGGCCGTGTATGTTGATGACCTGGTCATCTGGTCGTCAAGCATAACATAG GTCAGCGTTTTGGGATGAAAGACTTGGGCTCTCTCGCGCGTGTTGGGAAT AGAAGTACGATGTGACCGCTATAATAGTACCATAACCATCTCGCAGGGTA GCTATATCCGCGAGGTCCTAAAAAGATACGGTTTTGAAGAGTGTCGAGGA GTACCCACCCCTGTAGAGGGAAAAGTGAAGATTTCGGCACCCGAGTCGGC CGACAAGCCCTCCGAACCGAAGTCACTTGGAGCTGTACTGTCGGACATAG GCGCAGGAGTACAAGAAAGCAGCAGAGGGAGAAGTGGCAATTCGACTGAA TACAGAGGCATGGTAGGATCACTCATGTACGCCTTGATAGGAACTAGACC TGATATAGCATACGCGGTACACCAAGCAGCACTTCGTATGGAGGACCCAT GTCGGGAAGACTTCAGTACATGCAAGCGCATTTTTCGTTATCTCAGTACT GTGCTGACCTCGGCATTACGTTCGGCGGTAAGAGTAATGGTTACGGTCTG AAAGGATCGTTGACGCCGATTGGGCGGAAGATGTCGAGGACCGAAAGTCC ACAACTGGATACGTTTTCAAGCTCAACGGTGGTGCAATAAGTTGGTGCTT TAAGAAGTAACAGTTTGTCACGTGGTCCAGTACAGAGGCAGAGTACGTTG CTGCAGGAGAAGCAGGAAAGGAGACGGTATATCTTGAGAGTTACTAGGAT CGATAGGTTTCGGATGCAGGGGGAGCACGACATTGTTTGAGGACAATAAA TCAGCTATTAATCTCAGTAAGGGATCTCGTGCACACTGCAGGACAAAGCA CATCGGAGTGCGCTGGCACGGAATTCGAGAGTGGATTCGGGAAGGAATAT TGGCATTGAAATACGTGCAGACCAGCGATCAACTTGTTGACATTTTAACG AAAGGACTAAGCAGAGTACAGTTTCATAGATTGAGAATTTTACTCATGTG GTGC
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Coding sequence (CDS) from alignment at H-paniculata_contig17646:933..3536-

>mRNA_H-paniculata_contig17646.4203.1 ID=mRNA_H-paniculata_contig17646.4203.1|Name=mRNA_H-paniculata_contig17646.4203.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=384bp|location=Sequence derived from alignment at H-paniculata_contig17646:933..3536- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTAGGATCACTCATGTACGCCTTGATAGGAACTAGACCTGATATAGC
ATACGCGGTACACCAAGCAGCACTTCGTATGGAGGACCCATGTCGGGAAG
ACTTCAGTACATGCAAGCGCATTTTTCGTTATCTCAGTACTGTGCTGACC
TCGGCATTACGTTCGGCGGTAAGAGTAATGGTTACGGTCTGAATGGTAGG
ATCACTCATGTACGCCTTGATAGGAACTAGACCTGATATAGCATACGCGG
TACACCAAGCAGCACTTCGTATGGAGGACCCATGTCGGGAAGACTTCAGT
ACATGCAAGCGCATTTTTCGTTATCTCAGTACTGTGCTGACCTCGGCATT
ACGTTCGGCGGTAAGAGTAATGGTTACGGTCTGA
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